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Genes within 1Mb (chr6:133332465:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -619705 sc-eQTL 6.10e-01 0.0422 0.0826 0.444 B L1
ENSG00000079931 MOXD1 930990 sc-eQTL 7.25e-01 0.0308 0.0872 0.444 B L1
ENSG00000079950 STX7 819267 sc-eQTL 8.33e-01 -0.00695 0.0329 0.444 B L1
ENSG00000112303 VNN2 569006 sc-eQTL 8.08e-01 -0.015 0.0619 0.444 B L1
ENSG00000112306 RPS12 517896 sc-eQTL 9.92e-01 0.000389 0.0374 0.444 B L1
ENSG00000118515 SGK1 -985647 sc-eQTL 7.38e-02 -0.103 0.0573 0.444 B L1
ENSG00000146409 SLC18B1 519126 sc-eQTL 7.97e-01 -0.0202 0.0787 0.444 B L1
ENSG00000028839 TBPL1 -619705 sc-eQTL 4.09e-01 -0.0504 0.0609 0.444 CD4T L1
ENSG00000079950 STX7 819267 sc-eQTL 7.86e-02 -0.111 0.0629 0.444 CD4T L1
ENSG00000112303 VNN2 569006 sc-eQTL 2.00e-01 0.0703 0.0547 0.444 CD4T L1
ENSG00000112306 RPS12 517896 sc-eQTL 8.22e-01 -0.0084 0.0373 0.444 CD4T L1
ENSG00000118515 SGK1 -985647 sc-eQTL 4.01e-02 -0.103 0.0497 0.444 CD4T L1
ENSG00000146409 SLC18B1 519126 sc-eQTL 6.25e-01 -0.037 0.0755 0.444 CD4T L1
ENSG00000028839 TBPL1 -619705 sc-eQTL 8.86e-01 0.00867 0.0604 0.444 CD8T L1
ENSG00000079950 STX7 819267 sc-eQTL 4.89e-03 0.176 0.0619 0.444 CD8T L1
ENSG00000112303 VNN2 569006 sc-eQTL 1.48e-01 0.106 0.0732 0.444 CD8T L1
ENSG00000112306 RPS12 517896 sc-eQTL 2.74e-01 0.0275 0.0251 0.444 CD8T L1
ENSG00000118515 SGK1 -985647 sc-eQTL 4.11e-01 -0.0319 0.0387 0.444 CD8T L1
ENSG00000146409 SLC18B1 519126 sc-eQTL 4.19e-01 0.0615 0.0759 0.444 CD8T L1
ENSG00000028839 TBPL1 -619705 sc-eQTL 4.21e-01 0.0734 0.0912 0.441 DC L1
ENSG00000079950 STX7 819267 sc-eQTL 9.90e-01 0.000726 0.0567 0.441 DC L1
ENSG00000093134 VNN3 597700 sc-eQTL 4.20e-02 0.143 0.0696 0.441 DC L1
ENSG00000112299 VNN1 618410 sc-eQTL 5.45e-01 -0.046 0.0759 0.441 DC L1
ENSG00000112303 VNN2 569006 sc-eQTL 5.84e-01 0.0445 0.0812 0.441 DC L1
ENSG00000112306 RPS12 517896 sc-eQTL 3.43e-01 0.0432 0.0455 0.441 DC L1
ENSG00000118515 SGK1 -985647 sc-eQTL 9.96e-01 0.000285 0.0529 0.441 DC L1
ENSG00000146409 SLC18B1 519126 sc-eQTL 3.58e-01 -0.0663 0.0719 0.441 DC L1
ENSG00000286438 AL591115.1 229337 sc-eQTL 4.23e-01 0.0526 0.0655 0.441 DC L1
ENSG00000286887 AL355881.1 -963836 sc-eQTL 6.29e-01 -0.0396 0.0817 0.441 DC L1
ENSG00000028839 TBPL1 -619705 sc-eQTL 3.90e-02 -0.131 0.0631 0.444 Mono L1
ENSG00000079950 STX7 819267 sc-eQTL 3.94e-01 -0.0364 0.0426 0.444 Mono L1
ENSG00000093134 VNN3 597700 sc-eQTL 4.23e-01 0.0587 0.0731 0.444 Mono L1
ENSG00000112299 VNN1 618410 sc-eQTL 2.15e-01 -0.0976 0.0785 0.444 Mono L1
ENSG00000112303 VNN2 569006 sc-eQTL 1.62e-02 0.133 0.0549 0.444 Mono L1
ENSG00000112306 RPS12 517896 sc-eQTL 6.89e-01 -0.0133 0.0333 0.444 Mono L1
ENSG00000118515 SGK1 -985647 sc-eQTL 9.72e-01 -0.00165 0.0471 0.444 Mono L1
ENSG00000146409 SLC18B1 519126 sc-eQTL 6.65e-01 -0.0286 0.0659 0.444 Mono L1
ENSG00000286887 AL355881.1 -963836 sc-eQTL 5.70e-01 -0.0369 0.0648 0.444 Mono L1
ENSG00000028839 TBPL1 -619705 sc-eQTL 2.19e-02 -0.16 0.0691 0.444 NK L1
ENSG00000079950 STX7 819267 sc-eQTL 4.10e-01 0.0533 0.0646 0.444 NK L1
ENSG00000112303 VNN2 569006 sc-eQTL 4.32e-01 0.0633 0.0804 0.444 NK L1
ENSG00000112306 RPS12 517896 sc-eQTL 7.94e-01 0.00872 0.0333 0.444 NK L1
ENSG00000118515 SGK1 -985647 sc-eQTL 2.24e-01 0.0749 0.0614 0.444 NK L1
ENSG00000028839 TBPL1 -619705 sc-eQTL 2.10e-01 0.103 0.082 0.444 Other_T L1
ENSG00000079950 STX7 819267 sc-eQTL 2.39e-01 0.0763 0.0646 0.444 Other_T L1
ENSG00000112303 VNN2 569006 sc-eQTL 4.83e-01 -0.055 0.0783 0.444 Other_T L1
ENSG00000112306 RPS12 517896 sc-eQTL 5.98e-01 0.0164 0.0311 0.444 Other_T L1
ENSG00000118515 SGK1 -985647 sc-eQTL 5.48e-01 -0.0344 0.0571 0.444 Other_T L1
ENSG00000146409 SLC18B1 519126 sc-eQTL 7.58e-01 -0.0262 0.0851 0.444 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -619705 sc-eQTL 7.96e-01 0.0251 0.0966 0.431 B_Activated L2
ENSG00000079931 MOXD1 930990 sc-eQTL 6.34e-01 -0.0421 0.0882 0.431 B_Activated L2
ENSG00000079950 STX7 819267 sc-eQTL 6.32e-01 0.0396 0.0827 0.431 B_Activated L2
ENSG00000112303 VNN2 569006 sc-eQTL 2.29e-01 -0.106 0.0877 0.431 B_Activated L2
ENSG00000112306 RPS12 517896 sc-eQTL 2.41e-01 0.0552 0.047 0.431 B_Activated L2
ENSG00000118515 SGK1 -985647 sc-eQTL 2.09e-01 -0.106 0.0837 0.431 B_Activated L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 8.75e-01 0.013 0.0826 0.431 B_Activated L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 3.17e-01 -0.0915 0.0911 0.444 B_Intermediate L2
ENSG00000079931 MOXD1 930990 sc-eQTL 4.61e-01 0.0591 0.0801 0.444 B_Intermediate L2
ENSG00000079950 STX7 819267 sc-eQTL 9.65e-01 -0.00232 0.0525 0.444 B_Intermediate L2
ENSG00000112303 VNN2 569006 sc-eQTL 5.19e-01 0.051 0.079 0.444 B_Intermediate L2
ENSG00000112306 RPS12 517896 sc-eQTL 8.27e-01 -0.0106 0.0484 0.444 B_Intermediate L2
ENSG00000118515 SGK1 -985647 sc-eQTL 2.03e-03 -0.256 0.0818 0.444 B_Intermediate L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 7.62e-01 -0.0265 0.0872 0.444 B_Intermediate L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 2.85e-01 0.0951 0.0887 0.446 B_Memory L2
ENSG00000079931 MOXD1 930990 sc-eQTL 8.54e-01 -0.0151 0.082 0.446 B_Memory L2
ENSG00000079950 STX7 819267 sc-eQTL 4.22e-01 0.0517 0.0643 0.446 B_Memory L2
ENSG00000112303 VNN2 569006 sc-eQTL 7.85e-01 0.023 0.0842 0.446 B_Memory L2
ENSG00000112306 RPS12 517896 sc-eQTL 9.38e-01 -0.00318 0.0406 0.446 B_Memory L2
ENSG00000118515 SGK1 -985647 sc-eQTL 8.86e-02 -0.126 0.0739 0.446 B_Memory L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 2.90e-01 -0.0896 0.0844 0.446 B_Memory L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 8.55e-01 0.015 0.0817 0.444 B_Naive1 L2
ENSG00000079931 MOXD1 930990 sc-eQTL 8.20e-01 0.0204 0.0899 0.444 B_Naive1 L2
ENSG00000079950 STX7 819267 sc-eQTL 7.07e-01 -0.0148 0.0393 0.444 B_Naive1 L2
ENSG00000112303 VNN2 569006 sc-eQTL 5.70e-01 -0.0434 0.0762 0.444 B_Naive1 L2
ENSG00000112306 RPS12 517896 sc-eQTL 4.11e-01 -0.0358 0.0434 0.444 B_Naive1 L2
ENSG00000118515 SGK1 -985647 sc-eQTL 1.34e-01 -0.102 0.0676 0.444 B_Naive1 L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 4.13e-01 0.0687 0.0837 0.444 B_Naive1 L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 8.70e-02 0.15 0.0874 0.446 B_Naive2 L2
ENSG00000079931 MOXD1 930990 sc-eQTL 6.16e-01 0.0431 0.0858 0.446 B_Naive2 L2
ENSG00000079950 STX7 819267 sc-eQTL 4.11e-01 0.0385 0.0467 0.446 B_Naive2 L2
ENSG00000112303 VNN2 569006 sc-eQTL 7.51e-01 0.0272 0.0858 0.446 B_Naive2 L2
ENSG00000112306 RPS12 517896 sc-eQTL 5.54e-01 -0.0269 0.0454 0.446 B_Naive2 L2
ENSG00000118515 SGK1 -985647 sc-eQTL 3.30e-01 -0.0782 0.0801 0.446 B_Naive2 L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 8.92e-01 -0.0118 0.0867 0.446 B_Naive2 L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 4.18e-01 -0.0718 0.0884 0.448 CD4_CTL L2
ENSG00000079950 STX7 819267 sc-eQTL 1.30e-01 -0.133 0.0875 0.448 CD4_CTL L2
ENSG00000112303 VNN2 569006 sc-eQTL 6.60e-01 0.0391 0.0887 0.448 CD4_CTL L2
ENSG00000112306 RPS12 517896 sc-eQTL 4.29e-01 -0.0325 0.0409 0.448 CD4_CTL L2
ENSG00000118515 SGK1 -985647 sc-eQTL 2.00e-02 -0.164 0.0701 0.448 CD4_CTL L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 4.87e-01 -0.0575 0.0826 0.448 CD4_CTL L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 3.06e-01 0.071 0.0693 0.444 CD4_Naive L2
ENSG00000079950 STX7 819267 sc-eQTL 7.80e-02 -0.12 0.0676 0.444 CD4_Naive L2
ENSG00000112303 VNN2 569006 sc-eQTL 5.18e-01 0.0408 0.063 0.444 CD4_Naive L2
ENSG00000112306 RPS12 517896 sc-eQTL 3.27e-01 -0.0401 0.0408 0.444 CD4_Naive L2
ENSG00000118515 SGK1 -985647 sc-eQTL 2.92e-02 -0.109 0.0496 0.444 CD4_Naive L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 8.52e-01 -0.0148 0.0788 0.444 CD4_Naive L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 5.68e-01 -0.0427 0.0747 0.444 CD4_TCM L2
ENSG00000079950 STX7 819267 sc-eQTL 9.35e-01 -0.00613 0.0753 0.444 CD4_TCM L2
ENSG00000112303 VNN2 569006 sc-eQTL 6.07e-02 0.139 0.0736 0.444 CD4_TCM L2
ENSG00000112306 RPS12 517896 sc-eQTL 2.40e-01 0.0452 0.0383 0.444 CD4_TCM L2
ENSG00000118515 SGK1 -985647 sc-eQTL 2.16e-01 -0.0666 0.0536 0.444 CD4_TCM L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 7.65e-01 -0.0267 0.0891 0.444 CD4_TCM L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 5.37e-01 -0.0545 0.0882 0.444 CD4_TEM L2
ENSG00000079950 STX7 819267 sc-eQTL 3.93e-02 0.181 0.0875 0.444 CD4_TEM L2
ENSG00000112303 VNN2 569006 sc-eQTL 4.91e-01 -0.0584 0.0848 0.444 CD4_TEM L2
ENSG00000112306 RPS12 517896 sc-eQTL 7.30e-01 -0.012 0.0348 0.444 CD4_TEM L2
ENSG00000118515 SGK1 -985647 sc-eQTL 2.41e-01 -0.0701 0.0596 0.444 CD4_TEM L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 9.66e-01 0.00364 0.0865 0.444 CD4_TEM L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 9.02e-01 0.00934 0.076 0.444 CD8_CTL L2
ENSG00000079950 STX7 819267 sc-eQTL 6.73e-03 0.191 0.0698 0.444 CD8_CTL L2
ENSG00000112303 VNN2 569006 sc-eQTL 3.47e-01 0.076 0.0806 0.444 CD8_CTL L2
ENSG00000112306 RPS12 517896 sc-eQTL 4.00e-01 0.0364 0.0431 0.444 CD8_CTL L2
ENSG00000118515 SGK1 -985647 sc-eQTL 1.48e-01 -0.106 0.0726 0.444 CD8_CTL L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 1.09e-01 0.134 0.0832 0.444 CD8_CTL L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 4.71e-01 -0.0587 0.0813 0.444 CD8_Naive L2
ENSG00000079950 STX7 819267 sc-eQTL 1.22e-01 0.134 0.0862 0.444 CD8_Naive L2
ENSG00000112303 VNN2 569006 sc-eQTL 1.36e-01 0.111 0.0744 0.444 CD8_Naive L2
ENSG00000112306 RPS12 517896 sc-eQTL 8.91e-01 -0.00586 0.0428 0.444 CD8_Naive L2
ENSG00000118515 SGK1 -985647 sc-eQTL 9.55e-02 -0.0894 0.0534 0.444 CD8_Naive L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 9.06e-01 0.0102 0.0859 0.444 CD8_Naive L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 7.83e-01 -0.0256 0.0928 0.456 CD8_TCM L2
ENSG00000079950 STX7 819267 sc-eQTL 6.34e-01 0.041 0.0859 0.456 CD8_TCM L2
ENSG00000112303 VNN2 569006 sc-eQTL 8.70e-01 -0.014 0.0853 0.456 CD8_TCM L2
ENSG00000112306 RPS12 517896 sc-eQTL 2.28e-01 -0.0501 0.0414 0.456 CD8_TCM L2
ENSG00000118515 SGK1 -985647 sc-eQTL 1.24e-01 -0.106 0.0684 0.456 CD8_TCM L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 2.99e-01 0.0946 0.0908 0.456 CD8_TCM L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 1.98e-01 -0.108 0.0836 0.438 CD8_TEM L2
ENSG00000079950 STX7 819267 sc-eQTL 7.07e-01 -0.0345 0.0916 0.438 CD8_TEM L2
ENSG00000112303 VNN2 569006 sc-eQTL 2.34e-01 -0.108 0.0908 0.438 CD8_TEM L2
ENSG00000112306 RPS12 517896 sc-eQTL 5.59e-01 -0.0286 0.049 0.438 CD8_TEM L2
ENSG00000118515 SGK1 -985647 sc-eQTL 5.52e-01 0.0478 0.0802 0.438 CD8_TEM L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 6.43e-01 -0.0429 0.0926 0.438 CD8_TEM L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 9.43e-01 -0.00625 0.0871 0.446 MAIT L2
ENSG00000079950 STX7 819267 sc-eQTL 7.46e-01 -0.0269 0.0827 0.446 MAIT L2
ENSG00000112303 VNN2 569006 sc-eQTL 7.05e-01 0.0319 0.0841 0.446 MAIT L2
ENSG00000112306 RPS12 517896 sc-eQTL 9.17e-01 -0.00431 0.0414 0.446 MAIT L2
ENSG00000118515 SGK1 -985647 sc-eQTL 6.79e-01 -0.0241 0.0582 0.446 MAIT L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 6.13e-01 -0.0439 0.0867 0.446 MAIT L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 6.69e-01 0.0395 0.0923 0.442 NK_CD56bright L2
ENSG00000079950 STX7 819267 sc-eQTL 8.94e-01 -0.0115 0.0856 0.442 NK_CD56bright L2
ENSG00000112303 VNN2 569006 sc-eQTL 7.62e-01 0.0264 0.0869 0.442 NK_CD56bright L2
ENSG00000112306 RPS12 517896 sc-eQTL 2.28e-01 0.0584 0.0483 0.442 NK_CD56bright L2
ENSG00000118515 SGK1 -985647 sc-eQTL 8.43e-01 -0.0143 0.0724 0.442 NK_CD56bright L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 1.71e-02 -0.179 0.0743 0.444 NK_CD56dim L2
ENSG00000079950 STX7 819267 sc-eQTL 3.14e-01 0.0694 0.0688 0.444 NK_CD56dim L2
ENSG00000112303 VNN2 569006 sc-eQTL 3.65e-01 0.0781 0.086 0.444 NK_CD56dim L2
ENSG00000112306 RPS12 517896 sc-eQTL 6.40e-01 0.016 0.0342 0.444 NK_CD56dim L2
ENSG00000118515 SGK1 -985647 sc-eQTL 2.39e-01 0.0892 0.0755 0.444 NK_CD56dim L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 7.71e-01 -0.0275 0.0944 0.438 NK_HLA L2
ENSG00000079950 STX7 819267 sc-eQTL 1.27e-01 0.131 0.0854 0.438 NK_HLA L2
ENSG00000112303 VNN2 569006 sc-eQTL 4.06e-01 -0.0724 0.0868 0.438 NK_HLA L2
ENSG00000112306 RPS12 517896 sc-eQTL 5.20e-01 0.0261 0.0405 0.438 NK_HLA L2
ENSG00000118515 SGK1 -985647 sc-eQTL 5.43e-01 0.0488 0.08 0.438 NK_HLA L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 9.37e-02 -0.131 0.0778 0.444 NK_cytokine L2
ENSG00000079950 STX7 819267 sc-eQTL 6.35e-01 -0.036 0.0758 0.444 NK_cytokine L2
ENSG00000112303 VNN2 569006 sc-eQTL 9.27e-01 0.00783 0.0852 0.444 NK_cytokine L2
ENSG00000112306 RPS12 517896 sc-eQTL 6.13e-01 0.0234 0.0462 0.444 NK_cytokine L2
ENSG00000118515 SGK1 -985647 sc-eQTL 7.86e-01 0.0209 0.077 0.444 NK_cytokine L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 4.90e-01 -0.0742 0.107 0.433 PB L2
ENSG00000079931 MOXD1 930990 sc-eQTL 9.57e-01 -0.00496 0.0917 0.433 PB L2
ENSG00000079950 STX7 819267 sc-eQTL 4.23e-02 0.154 0.0751 0.433 PB L2
ENSG00000112303 VNN2 569006 sc-eQTL 3.61e-01 0.0855 0.0932 0.433 PB L2
ENSG00000112306 RPS12 517896 sc-eQTL 6.98e-01 -0.0207 0.053 0.433 PB L2
ENSG00000118515 SGK1 -985647 sc-eQTL 1.97e-01 -0.11 0.0851 0.433 PB L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 6.23e-01 0.049 0.0994 0.433 PB L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 8.21e-01 -0.0201 0.0888 0.443 Pro_T L2
ENSG00000079950 STX7 819267 sc-eQTL 1.19e-01 0.123 0.0789 0.443 Pro_T L2
ENSG00000112303 VNN2 569006 sc-eQTL 6.37e-01 0.0402 0.085 0.443 Pro_T L2
ENSG00000112306 RPS12 517896 sc-eQTL 6.06e-01 0.0166 0.0322 0.443 Pro_T L2
ENSG00000118515 SGK1 -985647 sc-eQTL 6.02e-01 -0.0337 0.0645 0.443 Pro_T L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 9.43e-01 -0.00597 0.0833 0.443 Pro_T L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 9.17e-01 -0.00941 0.0897 0.444 Treg L2
ENSG00000079950 STX7 819267 sc-eQTL 1.35e-02 -0.208 0.0833 0.444 Treg L2
ENSG00000112303 VNN2 569006 sc-eQTL 7.97e-01 -0.0183 0.0711 0.444 Treg L2
ENSG00000112306 RPS12 517896 sc-eQTL 8.10e-01 0.00758 0.0315 0.444 Treg L2
ENSG00000118515 SGK1 -985647 sc-eQTL 5.25e-01 -0.0422 0.0662 0.444 Treg L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 6.85e-02 -0.161 0.0882 0.444 Treg L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 3.40e-01 0.089 0.093 0.441 cDC L2
ENSG00000079950 STX7 819267 sc-eQTL 7.59e-01 0.0225 0.0732 0.441 cDC L2
ENSG00000093134 VNN3 597700 sc-eQTL 2.83e-02 0.159 0.0717 0.441 cDC L2
ENSG00000112299 VNN1 618410 sc-eQTL 7.38e-01 -0.0286 0.0854 0.441 cDC L2
ENSG00000112303 VNN2 569006 sc-eQTL 3.84e-01 0.0726 0.0831 0.441 cDC L2
ENSG00000112306 RPS12 517896 sc-eQTL 1.46e-01 0.0597 0.0409 0.441 cDC L2
ENSG00000118515 SGK1 -985647 sc-eQTL 5.89e-01 -0.0375 0.0692 0.441 cDC L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 8.26e-01 -0.0179 0.0814 0.441 cDC L2
ENSG00000286438 AL591115.1 229337 sc-eQTL 1.76e-01 0.0879 0.0648 0.441 cDC L2
ENSG00000286887 AL355881.1 -963836 sc-eQTL 1.35e-01 -0.119 0.0796 0.441 cDC L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 2.28e-01 -0.0877 0.0726 0.444 cMono_IL1B L2
ENSG00000079950 STX7 819267 sc-eQTL 8.82e-01 -0.00823 0.0553 0.444 cMono_IL1B L2
ENSG00000093134 VNN3 597700 sc-eQTL 6.13e-01 0.0395 0.0781 0.444 cMono_IL1B L2
ENSG00000112299 VNN1 618410 sc-eQTL 4.13e-01 -0.0645 0.0787 0.444 cMono_IL1B L2
ENSG00000112303 VNN2 569006 sc-eQTL 1.19e-01 0.098 0.0627 0.444 cMono_IL1B L2
ENSG00000112306 RPS12 517896 sc-eQTL 5.14e-01 -0.0228 0.035 0.444 cMono_IL1B L2
ENSG00000118515 SGK1 -985647 sc-eQTL 7.78e-01 0.0147 0.0522 0.444 cMono_IL1B L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 2.03e-01 -0.0859 0.0673 0.444 cMono_IL1B L2
ENSG00000286887 AL355881.1 -963836 sc-eQTL 5.49e-01 -0.0422 0.0703 0.444 cMono_IL1B L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 2.53e-01 -0.0951 0.0829 0.444 cMono_S100A L2
ENSG00000079950 STX7 819267 sc-eQTL 2.17e-01 -0.0742 0.0598 0.444 cMono_S100A L2
ENSG00000093134 VNN3 597700 sc-eQTL 5.61e-01 -0.0436 0.075 0.444 cMono_S100A L2
ENSG00000112299 VNN1 618410 sc-eQTL 1.04e-01 -0.132 0.0809 0.444 cMono_S100A L2
ENSG00000112303 VNN2 569006 sc-eQTL 5.50e-02 0.102 0.0529 0.444 cMono_S100A L2
ENSG00000112306 RPS12 517896 sc-eQTL 3.29e-01 -0.0375 0.0383 0.444 cMono_S100A L2
ENSG00000118515 SGK1 -985647 sc-eQTL 4.31e-01 -0.0346 0.0439 0.444 cMono_S100A L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 3.36e-01 0.0685 0.0709 0.444 cMono_S100A L2
ENSG00000286887 AL355881.1 -963836 sc-eQTL 4.32e-01 0.0546 0.0694 0.444 cMono_S100A L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 4.95e-01 0.0789 0.115 0.433 gdT L2
ENSG00000079950 STX7 819267 sc-eQTL 7.73e-01 0.0287 0.0993 0.433 gdT L2
ENSG00000112303 VNN2 569006 sc-eQTL 2.46e-01 -0.127 0.109 0.433 gdT L2
ENSG00000112306 RPS12 517896 sc-eQTL 8.95e-01 0.00555 0.0418 0.433 gdT L2
ENSG00000118515 SGK1 -985647 sc-eQTL 4.55e-01 -0.059 0.0788 0.433 gdT L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 7.23e-01 0.0384 0.108 0.433 gdT L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 1.90e-01 -0.111 0.0843 0.449 intMono L2
ENSG00000079950 STX7 819267 sc-eQTL 7.74e-01 -0.0232 0.0808 0.449 intMono L2
ENSG00000093134 VNN3 597700 sc-eQTL 4.16e-02 0.166 0.0808 0.449 intMono L2
ENSG00000112299 VNN1 618410 sc-eQTL 4.60e-01 -0.0597 0.0806 0.449 intMono L2
ENSG00000112303 VNN2 569006 sc-eQTL 7.66e-01 -0.0244 0.082 0.449 intMono L2
ENSG00000112306 RPS12 517896 sc-eQTL 9.38e-01 -0.0028 0.0357 0.449 intMono L2
ENSG00000118515 SGK1 -985647 sc-eQTL 7.61e-01 0.0182 0.0599 0.449 intMono L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 8.13e-01 -0.0205 0.0869 0.449 intMono L2
ENSG00000286887 AL355881.1 -963836 sc-eQTL 2.14e-01 -0.103 0.0828 0.449 intMono L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 1.49e-01 -0.13 0.0894 0.446 ncMono L2
ENSG00000079950 STX7 819267 sc-eQTL 4.08e-01 0.0503 0.0606 0.446 ncMono L2
ENSG00000093134 VNN3 597700 sc-eQTL 1.10e-01 0.137 0.0852 0.446 ncMono L2
ENSG00000112299 VNN1 618410 sc-eQTL 3.84e-01 -0.0742 0.085 0.446 ncMono L2
ENSG00000112303 VNN2 569006 sc-eQTL 4.89e-01 0.0566 0.0817 0.446 ncMono L2
ENSG00000112306 RPS12 517896 sc-eQTL 7.16e-01 0.015 0.041 0.446 ncMono L2
ENSG00000118515 SGK1 -985647 sc-eQTL 8.48e-01 -0.0111 0.0581 0.446 ncMono L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 3.06e-01 0.0743 0.0723 0.446 ncMono L2
ENSG00000286887 AL355881.1 -963836 sc-eQTL 8.22e-01 0.0173 0.0766 0.446 ncMono L2
ENSG00000028839 TBPL1 -619705 sc-eQTL 9.07e-01 -0.0125 0.107 0.435 pDC L2
ENSG00000079950 STX7 819267 sc-eQTL 3.04e-01 0.0732 0.071 0.435 pDC L2
ENSG00000093134 VNN3 597700 sc-eQTL 5.54e-01 0.0424 0.0716 0.435 pDC L2
ENSG00000112299 VNN1 618410 sc-eQTL 5.15e-01 -0.0475 0.0729 0.435 pDC L2
ENSG00000112303 VNN2 569006 sc-eQTL 3.95e-01 0.0739 0.0867 0.435 pDC L2
ENSG00000112306 RPS12 517896 sc-eQTL 1.62e-01 0.0836 0.0595 0.435 pDC L2
ENSG00000118515 SGK1 -985647 sc-eQTL 6.89e-01 0.0244 0.0608 0.435 pDC L2
ENSG00000146409 SLC18B1 519126 sc-eQTL 4.86e-01 0.0618 0.0885 0.435 pDC L2
ENSG00000286438 AL591115.1 229337 sc-eQTL 2.77e-01 0.092 0.0844 0.435 pDC L2
ENSG00000286887 AL355881.1 -963836 sc-eQTL 6.58e-01 -0.0334 0.0751 0.435 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -619705 sc-eQTL 6.21e-01 -0.0438 0.0885 0.444 B_Memory LOneK1K
ENSG00000079931 MOXD1 930990 sc-eQTL 4.61e-01 0.0635 0.086 0.444 B_Memory LOneK1K
ENSG00000079950 STX7 819267 sc-eQTL 9.47e-01 0.00323 0.0488 0.444 B_Memory LOneK1K
ENSG00000112303 VNN2 569006 sc-eQTL 9.32e-01 0.00658 0.0771 0.444 B_Memory LOneK1K
ENSG00000112306 RPS12 517896 sc-eQTL 7.62e-01 -0.0133 0.0439 0.444 B_Memory LOneK1K
ENSG00000118515 SGK1 -985647 sc-eQTL 3.38e-03 -0.2 0.0673 0.444 B_Memory LOneK1K
ENSG00000146409 SLC18B1 519126 sc-eQTL 7.62e-01 -0.0245 0.0807 0.444 B_Memory LOneK1K
ENSG00000028839 TBPL1 -619705 sc-eQTL 3.22e-01 0.0815 0.082 0.444 B_Naive LOneK1K
ENSG00000079931 MOXD1 930990 sc-eQTL 5.93e-01 0.0483 0.0902 0.444 B_Naive LOneK1K
ENSG00000079950 STX7 819267 sc-eQTL 9.75e-01 -0.00115 0.037 0.444 B_Naive LOneK1K
ENSG00000112303 VNN2 569006 sc-eQTL 9.51e-01 -0.00447 0.0719 0.444 B_Naive LOneK1K
ENSG00000112306 RPS12 517896 sc-eQTL 6.08e-01 -0.0223 0.0435 0.444 B_Naive LOneK1K
ENSG00000118515 SGK1 -985647 sc-eQTL 1.64e-01 -0.0937 0.0671 0.444 B_Naive LOneK1K
ENSG00000146409 SLC18B1 519126 sc-eQTL 7.20e-01 0.0295 0.0821 0.444 B_Naive LOneK1K
ENSG00000028839 TBPL1 -619705 sc-eQTL 8.60e-02 -0.113 0.0658 0.444 CD14_Mono LOneK1K
ENSG00000079950 STX7 819267 sc-eQTL 3.20e-01 -0.0458 0.046 0.444 CD14_Mono LOneK1K
ENSG00000093134 VNN3 597700 sc-eQTL 7.71e-01 0.0219 0.0751 0.444 CD14_Mono LOneK1K
ENSG00000112299 VNN1 618410 sc-eQTL 1.67e-01 -0.108 0.078 0.444 CD14_Mono LOneK1K
ENSG00000112303 VNN2 569006 sc-eQTL 6.31e-02 0.0959 0.0514 0.444 CD14_Mono LOneK1K
ENSG00000112306 RPS12 517896 sc-eQTL 6.16e-01 -0.0178 0.0355 0.444 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -985647 sc-eQTL 9.42e-01 -0.00355 0.0484 0.444 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 519126 sc-eQTL 6.41e-01 -0.0295 0.0632 0.444 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -963836 sc-eQTL 9.71e-01 -0.00241 0.0663 0.444 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -619705 sc-eQTL 9.33e-02 -0.145 0.086 0.444 CD16_Mono LOneK1K
ENSG00000079950 STX7 819267 sc-eQTL 7.04e-01 0.0217 0.0571 0.444 CD16_Mono LOneK1K
ENSG00000093134 VNN3 597700 sc-eQTL 2.33e-03 0.253 0.0821 0.444 CD16_Mono LOneK1K
ENSG00000112299 VNN1 618410 sc-eQTL 8.28e-01 -0.0181 0.0832 0.444 CD16_Mono LOneK1K
ENSG00000112303 VNN2 569006 sc-eQTL 4.54e-01 0.0587 0.0784 0.444 CD16_Mono LOneK1K
ENSG00000112306 RPS12 517896 sc-eQTL 6.49e-01 -0.0152 0.0333 0.444 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -985647 sc-eQTL 9.48e-01 0.0033 0.0504 0.444 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 519126 sc-eQTL 8.09e-01 0.0196 0.0808 0.444 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -963836 sc-eQTL 8.22e-02 -0.127 0.0726 0.444 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -619705 sc-eQTL 9.10e-03 -0.179 0.0681 0.444 NK_CD56dim LOneK1K
ENSG00000079950 STX7 819267 sc-eQTL 4.44e-01 0.0498 0.065 0.444 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 569006 sc-eQTL 4.22e-01 0.0662 0.0822 0.444 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 517896 sc-eQTL 6.99e-01 0.013 0.0336 0.444 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -985647 sc-eQTL 4.85e-01 0.0485 0.0694 0.444 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 618410 pQTL 0.00233 -0.108 0.0355 0.0 0.0 0.405
ENSG00000112299 VNN1 618410 eQTL 0.0331 -0.0466 0.0218 0.0 0.0 0.413

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina