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Genes within 1Mb (chr6:133330434:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -621736 sc-eQTL 9.78e-01 0.00305 0.109 0.797 B L1
ENSG00000079931 MOXD1 928959 sc-eQTL 9.63e-01 0.00529 0.115 0.797 B L1
ENSG00000079950 STX7 817236 sc-eQTL 5.02e-01 -0.029 0.0432 0.797 B L1
ENSG00000112303 VNN2 566975 sc-eQTL 5.86e-01 0.0443 0.0812 0.797 B L1
ENSG00000112306 RPS12 515865 sc-eQTL 9.95e-01 -0.000333 0.0491 0.797 B L1
ENSG00000118515 SGK1 -987678 sc-eQTL 8.59e-01 0.0135 0.0757 0.797 B L1
ENSG00000146409 SLC18B1 517095 sc-eQTL 5.21e-01 0.0665 0.103 0.797 B L1
ENSG00000028839 TBPL1 -621736 sc-eQTL 5.99e-01 0.0419 0.0796 0.797 CD4T L1
ENSG00000079950 STX7 817236 sc-eQTL 1.08e-01 -0.133 0.0823 0.797 CD4T L1
ENSG00000112303 VNN2 566975 sc-eQTL 3.26e-02 0.153 0.0709 0.797 CD4T L1
ENSG00000112306 RPS12 515865 sc-eQTL 9.34e-02 0.0816 0.0484 0.797 CD4T L1
ENSG00000118515 SGK1 -987678 sc-eQTL 6.79e-01 0.0272 0.0655 0.797 CD4T L1
ENSG00000146409 SLC18B1 517095 sc-eQTL 6.13e-01 -0.0499 0.0986 0.797 CD4T L1
ENSG00000028839 TBPL1 -621736 sc-eQTL 8.35e-01 0.0163 0.0778 0.797 CD8T L1
ENSG00000079950 STX7 817236 sc-eQTL 4.02e-03 0.232 0.0796 0.797 CD8T L1
ENSG00000112303 VNN2 566975 sc-eQTL 8.78e-01 -0.0146 0.0948 0.797 CD8T L1
ENSG00000112306 RPS12 515865 sc-eQTL 2.39e-01 0.0382 0.0323 0.797 CD8T L1
ENSG00000118515 SGK1 -987678 sc-eQTL 4.22e-01 0.0401 0.0499 0.797 CD8T L1
ENSG00000146409 SLC18B1 517095 sc-eQTL 9.79e-01 0.00261 0.098 0.797 CD8T L1
ENSG00000028839 TBPL1 -621736 sc-eQTL 6.80e-03 0.318 0.116 0.793 DC L1
ENSG00000079950 STX7 817236 sc-eQTL 3.70e-01 -0.0659 0.0734 0.793 DC L1
ENSG00000093134 VNN3 595669 sc-eQTL 5.70e-02 0.173 0.0904 0.793 DC L1
ENSG00000112299 VNN1 616379 sc-eQTL 1.56e-01 -0.14 0.0979 0.793 DC L1
ENSG00000112303 VNN2 566975 sc-eQTL 6.30e-01 0.0509 0.105 0.793 DC L1
ENSG00000112306 RPS12 515865 sc-eQTL 1.81e-02 0.139 0.0582 0.793 DC L1
ENSG00000118515 SGK1 -987678 sc-eQTL 7.84e-01 -0.0188 0.0685 0.793 DC L1
ENSG00000146409 SLC18B1 517095 sc-eQTL 4.76e-01 0.0666 0.0933 0.793 DC L1
ENSG00000286438 AL591115.1 227306 sc-eQTL 4.08e-01 -0.0704 0.0849 0.793 DC L1
ENSG00000286887 AL355881.1 -965867 sc-eQTL 7.09e-01 -0.0396 0.106 0.793 DC L1
ENSG00000028839 TBPL1 -621736 sc-eQTL 2.71e-01 -0.091 0.0825 0.797 Mono L1
ENSG00000079950 STX7 817236 sc-eQTL 3.78e-01 -0.0488 0.0552 0.797 Mono L1
ENSG00000093134 VNN3 595669 sc-eQTL 4.72e-01 0.0683 0.0949 0.797 Mono L1
ENSG00000112299 VNN1 616379 sc-eQTL 7.83e-03 -0.27 0.1 0.797 Mono L1
ENSG00000112303 VNN2 566975 sc-eQTL 9.54e-02 0.12 0.0716 0.797 Mono L1
ENSG00000112306 RPS12 515865 sc-eQTL 9.22e-01 0.00426 0.0432 0.797 Mono L1
ENSG00000118515 SGK1 -987678 sc-eQTL 6.12e-01 0.031 0.061 0.797 Mono L1
ENSG00000146409 SLC18B1 517095 sc-eQTL 6.80e-01 -0.0353 0.0855 0.797 Mono L1
ENSG00000286887 AL355881.1 -965867 sc-eQTL 8.92e-01 -0.0115 0.084 0.797 Mono L1
ENSG00000028839 TBPL1 -621736 sc-eQTL 2.01e-02 -0.211 0.09 0.796 NK L1
ENSG00000079950 STX7 817236 sc-eQTL 8.73e-02 -0.144 0.0837 0.796 NK L1
ENSG00000112303 VNN2 566975 sc-eQTL 6.64e-01 0.0456 0.105 0.796 NK L1
ENSG00000112306 RPS12 515865 sc-eQTL 3.62e-01 0.0396 0.0433 0.796 NK L1
ENSG00000118515 SGK1 -987678 sc-eQTL 8.23e-04 0.265 0.0782 0.796 NK L1
ENSG00000028839 TBPL1 -621736 sc-eQTL 1.66e-01 0.147 0.106 0.797 Other_T L1
ENSG00000079950 STX7 817236 sc-eQTL 9.21e-01 0.00834 0.0835 0.797 Other_T L1
ENSG00000112303 VNN2 566975 sc-eQTL 4.10e-01 -0.0833 0.101 0.797 Other_T L1
ENSG00000112306 RPS12 515865 sc-eQTL 7.15e-02 0.072 0.0397 0.797 Other_T L1
ENSG00000118515 SGK1 -987678 sc-eQTL 1.31e-01 0.111 0.0733 0.797 Other_T L1
ENSG00000146409 SLC18B1 517095 sc-eQTL 6.98e-01 -0.0425 0.11 0.797 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -621736 sc-eQTL 8.78e-01 0.0188 0.123 0.791 B_Activated L2
ENSG00000079931 MOXD1 928959 sc-eQTL 6.38e-01 0.0528 0.112 0.791 B_Activated L2
ENSG00000079950 STX7 817236 sc-eQTL 6.58e-01 0.0465 0.105 0.791 B_Activated L2
ENSG00000112303 VNN2 566975 sc-eQTL 6.81e-01 -0.0461 0.112 0.791 B_Activated L2
ENSG00000112306 RPS12 515865 sc-eQTL 5.34e-01 0.0373 0.0599 0.791 B_Activated L2
ENSG00000118515 SGK1 -987678 sc-eQTL 5.12e-01 -0.0702 0.107 0.791 B_Activated L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 6.98e-01 0.0408 0.105 0.791 B_Activated L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 1.83e-01 -0.157 0.117 0.796 B_Intermediate L2
ENSG00000079931 MOXD1 928959 sc-eQTL 2.30e-01 0.124 0.103 0.796 B_Intermediate L2
ENSG00000079950 STX7 817236 sc-eQTL 7.42e-02 -0.121 0.0673 0.796 B_Intermediate L2
ENSG00000112303 VNN2 566975 sc-eQTL 1.39e-01 0.151 0.102 0.796 B_Intermediate L2
ENSG00000112306 RPS12 515865 sc-eQTL 3.04e-01 0.0642 0.0623 0.796 B_Intermediate L2
ENSG00000118515 SGK1 -987678 sc-eQTL 9.78e-01 0.00293 0.108 0.796 B_Intermediate L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 9.31e-01 0.00983 0.113 0.796 B_Intermediate L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 3.58e-01 -0.103 0.112 0.797 B_Memory L2
ENSG00000079931 MOXD1 928959 sc-eQTL 7.37e-01 -0.0348 0.103 0.797 B_Memory L2
ENSG00000079950 STX7 817236 sc-eQTL 2.03e-01 0.103 0.0809 0.797 B_Memory L2
ENSG00000112303 VNN2 566975 sc-eQTL 7.98e-01 0.0272 0.106 0.797 B_Memory L2
ENSG00000112306 RPS12 515865 sc-eQTL 8.93e-01 -0.00686 0.0512 0.797 B_Memory L2
ENSG00000118515 SGK1 -987678 sc-eQTL 8.41e-01 0.0189 0.0938 0.797 B_Memory L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 2.76e-01 -0.116 0.106 0.797 B_Memory L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 5.26e-01 -0.0685 0.108 0.797 B_Naive1 L2
ENSG00000079931 MOXD1 928959 sc-eQTL 4.20e-01 0.0957 0.118 0.797 B_Naive1 L2
ENSG00000079950 STX7 817236 sc-eQTL 2.78e-01 -0.0562 0.0517 0.797 B_Naive1 L2
ENSG00000112303 VNN2 566975 sc-eQTL 9.43e-01 0.00722 0.101 0.797 B_Naive1 L2
ENSG00000112306 RPS12 515865 sc-eQTL 7.14e-01 0.021 0.0573 0.797 B_Naive1 L2
ENSG00000118515 SGK1 -987678 sc-eQTL 9.33e-01 0.00751 0.0897 0.797 B_Naive1 L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 6.49e-01 0.0504 0.111 0.797 B_Naive1 L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 1.92e-01 0.149 0.114 0.798 B_Naive2 L2
ENSG00000079931 MOXD1 928959 sc-eQTL 6.48e-02 -0.205 0.111 0.798 B_Naive2 L2
ENSG00000079950 STX7 817236 sc-eQTL 4.00e-01 0.0511 0.0606 0.798 B_Naive2 L2
ENSG00000112303 VNN2 566975 sc-eQTL 8.10e-01 0.0269 0.111 0.798 B_Naive2 L2
ENSG00000112306 RPS12 515865 sc-eQTL 6.30e-01 0.0284 0.059 0.798 B_Naive2 L2
ENSG00000118515 SGK1 -987678 sc-eQTL 7.33e-01 -0.0356 0.104 0.798 B_Naive2 L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 7.80e-01 0.0314 0.113 0.798 B_Naive2 L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 5.03e-01 0.0751 0.112 0.798 CD4_CTL L2
ENSG00000079950 STX7 817236 sc-eQTL 4.42e-01 -0.0857 0.111 0.798 CD4_CTL L2
ENSG00000112303 VNN2 566975 sc-eQTL 4.88e-01 -0.078 0.112 0.798 CD4_CTL L2
ENSG00000112306 RPS12 515865 sc-eQTL 4.51e-02 0.104 0.0514 0.798 CD4_CTL L2
ENSG00000118515 SGK1 -987678 sc-eQTL 2.23e-01 -0.11 0.0897 0.798 CD4_CTL L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 6.38e-01 -0.0493 0.105 0.798 CD4_CTL L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 2.86e-01 0.0967 0.0903 0.797 CD4_Naive L2
ENSG00000079950 STX7 817236 sc-eQTL 1.95e-01 -0.115 0.0884 0.797 CD4_Naive L2
ENSG00000112303 VNN2 566975 sc-eQTL 1.06e-01 0.133 0.0817 0.797 CD4_Naive L2
ENSG00000112306 RPS12 515865 sc-eQTL 7.30e-02 0.0954 0.053 0.797 CD4_Naive L2
ENSG00000118515 SGK1 -987678 sc-eQTL 2.79e-01 0.0708 0.0652 0.797 CD4_Naive L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 8.63e-01 -0.0178 0.103 0.797 CD4_Naive L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 4.11e-01 -0.0792 0.0961 0.797 CD4_TCM L2
ENSG00000079950 STX7 817236 sc-eQTL 8.92e-01 -0.0131 0.0969 0.797 CD4_TCM L2
ENSG00000112303 VNN2 566975 sc-eQTL 1.28e-02 0.236 0.0941 0.797 CD4_TCM L2
ENSG00000112306 RPS12 515865 sc-eQTL 2.67e-02 0.109 0.0489 0.797 CD4_TCM L2
ENSG00000118515 SGK1 -987678 sc-eQTL 9.10e-01 0.00784 0.0693 0.797 CD4_TCM L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 4.23e-01 -0.092 0.114 0.797 CD4_TCM L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 4.00e-01 -0.0945 0.112 0.797 CD4_TEM L2
ENSG00000079950 STX7 817236 sc-eQTL 7.96e-01 0.0291 0.112 0.797 CD4_TEM L2
ENSG00000112303 VNN2 566975 sc-eQTL 9.33e-01 0.00912 0.108 0.797 CD4_TEM L2
ENSG00000112306 RPS12 515865 sc-eQTL 2.02e-02 0.102 0.0437 0.797 CD4_TEM L2
ENSG00000118515 SGK1 -987678 sc-eQTL 3.51e-01 0.0709 0.0758 0.797 CD4_TEM L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 9.20e-01 -0.011 0.11 0.797 CD4_TEM L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 4.29e-01 -0.0788 0.0995 0.797 CD8_CTL L2
ENSG00000079950 STX7 817236 sc-eQTL 1.18e-03 0.299 0.0909 0.797 CD8_CTL L2
ENSG00000112303 VNN2 566975 sc-eQTL 6.13e-01 -0.0536 0.106 0.797 CD8_CTL L2
ENSG00000112306 RPS12 515865 sc-eQTL 2.30e-02 0.128 0.056 0.797 CD8_CTL L2
ENSG00000118515 SGK1 -987678 sc-eQTL 8.84e-01 0.014 0.0957 0.797 CD8_CTL L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 1.84e-01 0.146 0.109 0.797 CD8_CTL L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 8.55e-01 -0.0192 0.105 0.797 CD8_Naive L2
ENSG00000079950 STX7 817236 sc-eQTL 2.00e-01 0.144 0.112 0.797 CD8_Naive L2
ENSG00000112303 VNN2 566975 sc-eQTL 2.82e-01 0.104 0.0964 0.797 CD8_Naive L2
ENSG00000112306 RPS12 515865 sc-eQTL 1.60e-01 0.0777 0.0551 0.797 CD8_Naive L2
ENSG00000118515 SGK1 -987678 sc-eQTL 1.64e-01 0.0966 0.0692 0.797 CD8_Naive L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 5.41e-01 -0.068 0.111 0.797 CD8_Naive L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 8.77e-01 -0.0183 0.118 0.796 CD8_TCM L2
ENSG00000079950 STX7 817236 sc-eQTL 4.35e-01 0.0857 0.11 0.796 CD8_TCM L2
ENSG00000112303 VNN2 566975 sc-eQTL 3.44e-01 -0.103 0.109 0.796 CD8_TCM L2
ENSG00000112306 RPS12 515865 sc-eQTL 2.95e-01 0.0556 0.0529 0.796 CD8_TCM L2
ENSG00000118515 SGK1 -987678 sc-eQTL 9.43e-01 0.00633 0.0879 0.796 CD8_TCM L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 1.55e-01 0.165 0.116 0.796 CD8_TCM L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 9.57e-01 0.00591 0.11 0.797 CD8_TEM L2
ENSG00000079950 STX7 817236 sc-eQTL 7.77e-01 -0.0342 0.12 0.797 CD8_TEM L2
ENSG00000112303 VNN2 566975 sc-eQTL 7.55e-03 -0.318 0.118 0.797 CD8_TEM L2
ENSG00000112306 RPS12 515865 sc-eQTL 6.09e-01 0.033 0.0644 0.797 CD8_TEM L2
ENSG00000118515 SGK1 -987678 sc-eQTL 2.97e-01 -0.11 0.105 0.797 CD8_TEM L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 3.49e-01 -0.114 0.122 0.797 CD8_TEM L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 5.58e-01 0.0652 0.111 0.799 MAIT L2
ENSG00000079950 STX7 817236 sc-eQTL 4.65e-01 -0.0772 0.105 0.799 MAIT L2
ENSG00000112303 VNN2 566975 sc-eQTL 9.29e-01 0.00965 0.107 0.799 MAIT L2
ENSG00000112306 RPS12 515865 sc-eQTL 1.12e-01 0.0838 0.0525 0.799 MAIT L2
ENSG00000118515 SGK1 -987678 sc-eQTL 5.58e-01 0.0436 0.0743 0.799 MAIT L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 4.84e-01 -0.0775 0.111 0.799 MAIT L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 3.49e-02 0.254 0.12 0.796 NK_CD56bright L2
ENSG00000079950 STX7 817236 sc-eQTL 8.54e-01 -0.0206 0.112 0.796 NK_CD56bright L2
ENSG00000112303 VNN2 566975 sc-eQTL 1.18e-01 0.177 0.113 0.796 NK_CD56bright L2
ENSG00000112306 RPS12 515865 sc-eQTL 4.50e-01 0.048 0.0633 0.796 NK_CD56bright L2
ENSG00000118515 SGK1 -987678 sc-eQTL 1.04e-01 0.154 0.0941 0.796 NK_CD56bright L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 3.27e-02 -0.209 0.097 0.795 NK_CD56dim L2
ENSG00000079950 STX7 817236 sc-eQTL 2.81e-01 -0.0968 0.0896 0.795 NK_CD56dim L2
ENSG00000112303 VNN2 566975 sc-eQTL 4.01e-01 0.0943 0.112 0.795 NK_CD56dim L2
ENSG00000112306 RPS12 515865 sc-eQTL 2.47e-01 0.0516 0.0444 0.795 NK_CD56dim L2
ENSG00000118515 SGK1 -987678 sc-eQTL 7.15e-02 0.177 0.098 0.795 NK_CD56dim L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 2.38e-01 -0.146 0.124 0.801 NK_HLA L2
ENSG00000079950 STX7 817236 sc-eQTL 3.65e-01 0.102 0.113 0.801 NK_HLA L2
ENSG00000112303 VNN2 566975 sc-eQTL 8.76e-02 -0.195 0.114 0.801 NK_HLA L2
ENSG00000112306 RPS12 515865 sc-eQTL 7.42e-01 0.0176 0.0533 0.801 NK_HLA L2
ENSG00000118515 SGK1 -987678 sc-eQTL 7.38e-01 0.0353 0.105 0.801 NK_HLA L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 1.36e-01 -0.151 0.101 0.795 NK_cytokine L2
ENSG00000079950 STX7 817236 sc-eQTL 6.63e-02 -0.18 0.0974 0.795 NK_cytokine L2
ENSG00000112303 VNN2 566975 sc-eQTL 7.97e-01 -0.0284 0.11 0.795 NK_cytokine L2
ENSG00000112306 RPS12 515865 sc-eQTL 6.91e-01 0.0239 0.0599 0.795 NK_cytokine L2
ENSG00000118515 SGK1 -987678 sc-eQTL 8.67e-02 0.17 0.099 0.795 NK_cytokine L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 6.86e-01 0.0552 0.136 0.807 PB L2
ENSG00000079931 MOXD1 928959 sc-eQTL 4.71e-01 -0.0839 0.116 0.807 PB L2
ENSG00000079950 STX7 817236 sc-eQTL 6.28e-02 0.179 0.0955 0.807 PB L2
ENSG00000112303 VNN2 566975 sc-eQTL 6.60e-01 -0.0523 0.118 0.807 PB L2
ENSG00000112306 RPS12 515865 sc-eQTL 7.16e-01 -0.0245 0.0672 0.807 PB L2
ENSG00000118515 SGK1 -987678 sc-eQTL 5.32e-01 -0.068 0.108 0.807 PB L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 8.56e-01 0.0229 0.126 0.807 PB L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 2.31e-01 0.136 0.113 0.798 Pro_T L2
ENSG00000079950 STX7 817236 sc-eQTL 1.13e-01 0.16 0.101 0.798 Pro_T L2
ENSG00000112303 VNN2 566975 sc-eQTL 7.21e-01 0.0387 0.109 0.798 Pro_T L2
ENSG00000112306 RPS12 515865 sc-eQTL 9.68e-02 0.0681 0.0408 0.798 Pro_T L2
ENSG00000118515 SGK1 -987678 sc-eQTL 3.27e-01 0.0807 0.0822 0.798 Pro_T L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 4.30e-01 0.084 0.106 0.798 Pro_T L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 7.51e-01 0.0363 0.114 0.797 Treg L2
ENSG00000079950 STX7 817236 sc-eQTL 2.81e-01 -0.116 0.107 0.797 Treg L2
ENSG00000112303 VNN2 566975 sc-eQTL 4.97e-01 -0.0615 0.0904 0.797 Treg L2
ENSG00000112306 RPS12 515865 sc-eQTL 7.24e-01 0.0142 0.04 0.797 Treg L2
ENSG00000118515 SGK1 -987678 sc-eQTL 7.33e-01 0.0288 0.0843 0.797 Treg L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 4.65e-01 0.0826 0.113 0.797 Treg L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 1.17e-02 0.3 0.118 0.795 cDC L2
ENSG00000079950 STX7 817236 sc-eQTL 5.10e-01 -0.0621 0.0941 0.795 cDC L2
ENSG00000093134 VNN3 595669 sc-eQTL 6.70e-02 0.171 0.0927 0.795 cDC L2
ENSG00000112299 VNN1 616379 sc-eQTL 3.51e-01 -0.103 0.11 0.795 cDC L2
ENSG00000112303 VNN2 566975 sc-eQTL 7.14e-01 -0.0393 0.107 0.795 cDC L2
ENSG00000112306 RPS12 515865 sc-eQTL 1.18e-01 0.0825 0.0526 0.795 cDC L2
ENSG00000118515 SGK1 -987678 sc-eQTL 7.56e-01 -0.0278 0.0891 0.795 cDC L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 1.69e-01 0.144 0.104 0.795 cDC L2
ENSG00000286438 AL591115.1 227306 sc-eQTL 1.90e-01 -0.11 0.0834 0.795 cDC L2
ENSG00000286887 AL355881.1 -965867 sc-eQTL 4.07e-01 -0.0855 0.103 0.795 cDC L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 1.17e-01 -0.146 0.093 0.797 cMono_IL1B L2
ENSG00000079950 STX7 817236 sc-eQTL 7.54e-01 -0.0222 0.071 0.797 cMono_IL1B L2
ENSG00000093134 VNN3 595669 sc-eQTL 8.30e-01 0.0215 0.1 0.797 cMono_IL1B L2
ENSG00000112299 VNN1 616379 sc-eQTL 6.85e-03 -0.272 0.0995 0.797 cMono_IL1B L2
ENSG00000112303 VNN2 566975 sc-eQTL 2.84e-01 0.0866 0.0807 0.797 cMono_IL1B L2
ENSG00000112306 RPS12 515865 sc-eQTL 8.12e-01 -0.0107 0.0449 0.797 cMono_IL1B L2
ENSG00000118515 SGK1 -987678 sc-eQTL 6.32e-01 0.0321 0.067 0.797 cMono_IL1B L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 1.34e-01 -0.13 0.0862 0.797 cMono_IL1B L2
ENSG00000286887 AL355881.1 -965867 sc-eQTL 7.30e-01 0.0312 0.0902 0.797 cMono_IL1B L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 7.86e-01 -0.029 0.106 0.797 cMono_S100A L2
ENSG00000079950 STX7 817236 sc-eQTL 1.13e-01 -0.122 0.0765 0.797 cMono_S100A L2
ENSG00000093134 VNN3 595669 sc-eQTL 5.98e-01 -0.0507 0.096 0.797 cMono_S100A L2
ENSG00000112299 VNN1 616379 sc-eQTL 1.63e-02 -0.249 0.103 0.797 cMono_S100A L2
ENSG00000112303 VNN2 566975 sc-eQTL 2.17e-01 0.0842 0.0681 0.797 cMono_S100A L2
ENSG00000112306 RPS12 515865 sc-eQTL 7.94e-01 -0.0129 0.0492 0.797 cMono_S100A L2
ENSG00000118515 SGK1 -987678 sc-eQTL 8.75e-01 0.00884 0.0563 0.797 cMono_S100A L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 3.90e-01 0.0783 0.0909 0.797 cMono_S100A L2
ENSG00000286887 AL355881.1 -965867 sc-eQTL 7.41e-01 -0.0295 0.089 0.797 cMono_S100A L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 7.49e-01 -0.0491 0.153 0.791 gdT L2
ENSG00000079950 STX7 817236 sc-eQTL 1.02e-01 -0.215 0.13 0.791 gdT L2
ENSG00000112303 VNN2 566975 sc-eQTL 3.12e-01 -0.147 0.145 0.791 gdT L2
ENSG00000112306 RPS12 515865 sc-eQTL 1.31e-01 0.0836 0.055 0.791 gdT L2
ENSG00000118515 SGK1 -987678 sc-eQTL 2.41e-01 0.123 0.104 0.791 gdT L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 8.40e-01 -0.029 0.143 0.791 gdT L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 4.02e-02 -0.22 0.107 0.793 intMono L2
ENSG00000079950 STX7 817236 sc-eQTL 4.24e-01 -0.0823 0.103 0.793 intMono L2
ENSG00000093134 VNN3 595669 sc-eQTL 1.47e-01 0.151 0.103 0.793 intMono L2
ENSG00000112299 VNN1 616379 sc-eQTL 5.75e-01 -0.0576 0.103 0.793 intMono L2
ENSG00000112303 VNN2 566975 sc-eQTL 9.99e-01 6.85e-05 0.104 0.793 intMono L2
ENSG00000112306 RPS12 515865 sc-eQTL 8.84e-01 0.00665 0.0454 0.793 intMono L2
ENSG00000118515 SGK1 -987678 sc-eQTL 1.73e-01 0.104 0.0759 0.793 intMono L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 9.58e-01 0.00588 0.111 0.793 intMono L2
ENSG00000286887 AL355881.1 -965867 sc-eQTL 1.60e-01 -0.148 0.105 0.793 intMono L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 7.10e-01 -0.0439 0.118 0.801 ncMono L2
ENSG00000079950 STX7 817236 sc-eQTL 9.69e-01 -0.00307 0.0796 0.801 ncMono L2
ENSG00000093134 VNN3 595669 sc-eQTL 8.89e-01 0.0157 0.112 0.801 ncMono L2
ENSG00000112299 VNN1 616379 sc-eQTL 2.29e-03 -0.337 0.109 0.801 ncMono L2
ENSG00000112303 VNN2 566975 sc-eQTL 5.01e-01 0.0723 0.107 0.801 ncMono L2
ENSG00000112306 RPS12 515865 sc-eQTL 5.78e-01 -0.03 0.0538 0.801 ncMono L2
ENSG00000118515 SGK1 -987678 sc-eQTL 9.98e-01 0.000168 0.0761 0.801 ncMono L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 6.97e-01 0.037 0.095 0.801 ncMono L2
ENSG00000286887 AL355881.1 -965867 sc-eQTL 1.57e-01 0.142 0.1 0.801 ncMono L2
ENSG00000028839 TBPL1 -621736 sc-eQTL 1.26e-01 0.208 0.135 0.791 pDC L2
ENSG00000079950 STX7 817236 sc-eQTL 1.71e-01 -0.124 0.09 0.791 pDC L2
ENSG00000093134 VNN3 595669 sc-eQTL 2.01e-02 0.21 0.0896 0.791 pDC L2
ENSG00000112299 VNN1 616379 sc-eQTL 3.04e-01 -0.0953 0.0925 0.791 pDC L2
ENSG00000112303 VNN2 566975 sc-eQTL 8.61e-02 0.189 0.109 0.791 pDC L2
ENSG00000112306 RPS12 515865 sc-eQTL 7.52e-02 0.135 0.0753 0.791 pDC L2
ENSG00000118515 SGK1 -987678 sc-eQTL 7.56e-01 0.0241 0.0773 0.791 pDC L2
ENSG00000146409 SLC18B1 517095 sc-eQTL 4.32e-02 0.227 0.111 0.791 pDC L2
ENSG00000286438 AL591115.1 227306 sc-eQTL 8.29e-01 0.0234 0.108 0.791 pDC L2
ENSG00000286887 AL355881.1 -965867 sc-eQTL 1.00e-01 -0.157 0.0948 0.791 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -621736 sc-eQTL 2.75e-01 -0.124 0.113 0.797 B_Memory LOneK1K
ENSG00000079931 MOXD1 928959 sc-eQTL 1.52e-01 0.158 0.11 0.797 B_Memory LOneK1K
ENSG00000079950 STX7 817236 sc-eQTL 5.41e-01 -0.0383 0.0624 0.797 B_Memory LOneK1K
ENSG00000112303 VNN2 566975 sc-eQTL 7.20e-01 0.0355 0.0988 0.797 B_Memory LOneK1K
ENSG00000112306 RPS12 515865 sc-eQTL 4.80e-01 0.0399 0.0563 0.797 B_Memory LOneK1K
ENSG00000118515 SGK1 -987678 sc-eQTL 9.44e-01 0.00623 0.0881 0.797 B_Memory LOneK1K
ENSG00000146409 SLC18B1 517095 sc-eQTL 7.29e-01 -0.0358 0.103 0.797 B_Memory LOneK1K
ENSG00000028839 TBPL1 -621736 sc-eQTL 6.83e-01 0.0444 0.108 0.797 B_Naive LOneK1K
ENSG00000079931 MOXD1 928959 sc-eQTL 7.51e-01 -0.0379 0.119 0.797 B_Naive LOneK1K
ENSG00000079950 STX7 817236 sc-eQTL 9.19e-01 0.00497 0.0489 0.797 B_Naive LOneK1K
ENSG00000112303 VNN2 566975 sc-eQTL 9.20e-01 0.00949 0.0949 0.797 B_Naive LOneK1K
ENSG00000112306 RPS12 515865 sc-eQTL 3.99e-01 0.0485 0.0573 0.797 B_Naive LOneK1K
ENSG00000118515 SGK1 -987678 sc-eQTL 9.25e-01 0.00833 0.0889 0.797 B_Naive LOneK1K
ENSG00000146409 SLC18B1 517095 sc-eQTL 4.01e-01 0.0911 0.108 0.797 B_Naive LOneK1K
ENSG00000028839 TBPL1 -621736 sc-eQTL 3.30e-01 -0.0835 0.0854 0.797 CD14_Mono LOneK1K
ENSG00000079950 STX7 817236 sc-eQTL 3.05e-01 -0.0611 0.0594 0.797 CD14_Mono LOneK1K
ENSG00000093134 VNN3 595669 sc-eQTL 6.69e-01 0.0415 0.097 0.797 CD14_Mono LOneK1K
ENSG00000112299 VNN1 616379 sc-eQTL 9.44e-03 -0.261 0.0996 0.797 CD14_Mono LOneK1K
ENSG00000112303 VNN2 566975 sc-eQTL 1.14e-01 0.105 0.0665 0.797 CD14_Mono LOneK1K
ENSG00000112306 RPS12 515865 sc-eQTL 9.38e-01 -0.00358 0.0459 0.797 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -987678 sc-eQTL 7.58e-01 0.0193 0.0625 0.797 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 517095 sc-eQTL 5.89e-01 -0.0442 0.0816 0.797 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -965867 sc-eQTL 9.68e-01 0.00339 0.0856 0.797 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -621736 sc-eQTL 8.59e-02 -0.191 0.111 0.795 CD16_Mono LOneK1K
ENSG00000079950 STX7 817236 sc-eQTL 8.77e-01 0.0114 0.0737 0.795 CD16_Mono LOneK1K
ENSG00000093134 VNN3 595669 sc-eQTL 2.96e-01 0.113 0.108 0.795 CD16_Mono LOneK1K
ENSG00000112299 VNN1 616379 sc-eQTL 1.71e-02 -0.255 0.106 0.795 CD16_Mono LOneK1K
ENSG00000112303 VNN2 566975 sc-eQTL 5.75e-01 0.0569 0.101 0.795 CD16_Mono LOneK1K
ENSG00000112306 RPS12 515865 sc-eQTL 5.24e-01 -0.0274 0.043 0.795 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -987678 sc-eQTL 3.90e-01 0.0559 0.065 0.795 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 517095 sc-eQTL 2.11e-01 0.13 0.104 0.795 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -965867 sc-eQTL 5.70e-01 -0.0537 0.0943 0.795 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -621736 sc-eQTL 1.83e-02 -0.213 0.0895 0.795 NK_CD56dim LOneK1K
ENSG00000079950 STX7 817236 sc-eQTL 4.18e-02 -0.173 0.0843 0.795 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 566975 sc-eQTL 9.68e-01 0.0043 0.108 0.795 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 515865 sc-eQTL 3.96e-01 0.0374 0.0439 0.795 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -987678 sc-eQTL 1.76e-02 0.215 0.0897 0.795 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 616379 pQTL 8.52e-13 -0.296 0.041 0.0 0.0 0.218
ENSG00000112299 VNN1 616379 eQTL 0.00395 -0.0735 0.0255 0.0 0.0 0.218

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina