logo

Genes within 1Mb (chr6:133329773:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -622397 sc-eQTL 4.67e-01 -0.0646 0.0886 0.344 B L1
ENSG00000079931 MOXD1 928298 sc-eQTL 5.69e-01 -0.0534 0.0936 0.344 B L1
ENSG00000079950 STX7 816575 sc-eQTL 6.51e-01 -0.016 0.0353 0.344 B L1
ENSG00000112303 VNN2 566314 sc-eQTL 3.78e-01 0.0585 0.0663 0.344 B L1
ENSG00000112306 RPS12 515204 sc-eQTL 8.96e-01 0.00523 0.0402 0.344 B L1
ENSG00000118515 SGK1 -988339 sc-eQTL 4.12e-02 0.126 0.0613 0.344 B L1
ENSG00000146409 SLC18B1 516434 sc-eQTL 7.07e-01 0.0319 0.0845 0.344 B L1
ENSG00000028839 TBPL1 -622397 sc-eQTL 1.89e-01 0.0863 0.0655 0.344 CD4T L1
ENSG00000079950 STX7 816575 sc-eQTL 6.91e-01 0.0272 0.0684 0.344 CD4T L1
ENSG00000112303 VNN2 566314 sc-eQTL 5.54e-01 0.0351 0.0592 0.344 CD4T L1
ENSG00000112306 RPS12 515204 sc-eQTL 4.05e-02 0.0822 0.0399 0.344 CD4T L1
ENSG00000118515 SGK1 -988339 sc-eQTL 5.61e-03 0.149 0.0532 0.344 CD4T L1
ENSG00000146409 SLC18B1 516434 sc-eQTL 9.79e-01 0.00211 0.0815 0.344 CD4T L1
ENSG00000028839 TBPL1 -622397 sc-eQTL 9.65e-01 -0.00289 0.0655 0.344 CD8T L1
ENSG00000079950 STX7 816575 sc-eQTL 4.63e-01 -0.0502 0.0683 0.344 CD8T L1
ENSG00000112303 VNN2 566314 sc-eQTL 8.93e-02 -0.135 0.0793 0.344 CD8T L1
ENSG00000112306 RPS12 515204 sc-eQTL 8.93e-01 0.00367 0.0273 0.344 CD8T L1
ENSG00000118515 SGK1 -988339 sc-eQTL 1.32e-01 0.0632 0.0418 0.344 CD8T L1
ENSG00000146409 SLC18B1 516434 sc-eQTL 3.42e-01 -0.0783 0.0823 0.344 CD8T L1
ENSG00000028839 TBPL1 -622397 sc-eQTL 1.23e-01 0.149 0.0963 0.342 DC L1
ENSG00000079950 STX7 816575 sc-eQTL 4.45e-01 -0.046 0.0601 0.342 DC L1
ENSG00000093134 VNN3 595008 sc-eQTL 5.71e-01 -0.0424 0.0746 0.342 DC L1
ENSG00000112299 VNN1 615718 sc-eQTL 4.78e-01 -0.0572 0.0805 0.342 DC L1
ENSG00000112303 VNN2 566314 sc-eQTL 9.81e-01 -0.00202 0.0862 0.342 DC L1
ENSG00000112306 RPS12 515204 sc-eQTL 4.40e-01 0.0374 0.0483 0.342 DC L1
ENSG00000118515 SGK1 -988339 sc-eQTL 5.64e-01 -0.0324 0.056 0.342 DC L1
ENSG00000146409 SLC18B1 516434 sc-eQTL 1.81e-01 0.102 0.0761 0.342 DC L1
ENSG00000286438 AL591115.1 226645 sc-eQTL 1.27e-01 -0.106 0.0692 0.342 DC L1
ENSG00000286887 AL355881.1 -966528 sc-eQTL 9.57e-01 0.00465 0.0868 0.342 DC L1
ENSG00000028839 TBPL1 -622397 sc-eQTL 2.11e-01 0.0867 0.0691 0.344 Mono L1
ENSG00000079950 STX7 816575 sc-eQTL 9.38e-01 0.00361 0.0464 0.344 Mono L1
ENSG00000093134 VNN3 595008 sc-eQTL 5.83e-01 -0.0438 0.0796 0.344 Mono L1
ENSG00000112299 VNN1 615718 sc-eQTL 2.42e-01 -0.1 0.0855 0.344 Mono L1
ENSG00000112303 VNN2 566314 sc-eQTL 2.67e-01 -0.0672 0.0603 0.344 Mono L1
ENSG00000112306 RPS12 515204 sc-eQTL 5.68e-01 0.0207 0.0362 0.344 Mono L1
ENSG00000118515 SGK1 -988339 sc-eQTL 9.59e-01 -0.00262 0.0512 0.344 Mono L1
ENSG00000146409 SLC18B1 516434 sc-eQTL 8.83e-01 -0.0106 0.0717 0.344 Mono L1
ENSG00000286887 AL355881.1 -966528 sc-eQTL 7.76e-01 0.02 0.0705 0.344 Mono L1
ENSG00000028839 TBPL1 -622397 sc-eQTL 7.60e-01 0.0229 0.0751 0.343 NK L1
ENSG00000079950 STX7 816575 sc-eQTL 2.07e-02 -0.16 0.0686 0.343 NK L1
ENSG00000112303 VNN2 566314 sc-eQTL 7.90e-01 -0.0231 0.0864 0.343 NK L1
ENSG00000112306 RPS12 515204 sc-eQTL 4.24e-01 0.0286 0.0357 0.343 NK L1
ENSG00000118515 SGK1 -988339 sc-eQTL 2.13e-01 0.0823 0.0659 0.343 NK L1
ENSG00000028839 TBPL1 -622397 sc-eQTL 8.53e-01 -0.0161 0.0868 0.344 Other_T L1
ENSG00000079950 STX7 816575 sc-eQTL 2.14e-01 -0.0849 0.0681 0.344 Other_T L1
ENSG00000112303 VNN2 566314 sc-eQTL 9.47e-01 0.00545 0.0826 0.344 Other_T L1
ENSG00000112306 RPS12 515204 sc-eQTL 2.45e-01 0.038 0.0327 0.344 Other_T L1
ENSG00000118515 SGK1 -988339 sc-eQTL 6.03e-02 0.113 0.0598 0.344 Other_T L1
ENSG00000146409 SLC18B1 516434 sc-eQTL 7.17e-01 -0.0325 0.0897 0.344 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -622397 sc-eQTL 6.90e-01 -0.0417 0.105 0.352 B_Activated L2
ENSG00000079931 MOXD1 928298 sc-eQTL 4.94e-01 0.0653 0.0954 0.352 B_Activated L2
ENSG00000079950 STX7 816575 sc-eQTL 5.87e-01 -0.0487 0.0895 0.352 B_Activated L2
ENSG00000112303 VNN2 566314 sc-eQTL 3.48e-01 0.0896 0.0951 0.352 B_Activated L2
ENSG00000112306 RPS12 515204 sc-eQTL 7.24e-01 -0.0181 0.0511 0.352 B_Activated L2
ENSG00000118515 SGK1 -988339 sc-eQTL 3.08e-01 0.0929 0.0908 0.352 B_Activated L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 9.06e-01 -0.0106 0.0895 0.352 B_Activated L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 8.00e-01 0.0246 0.0967 0.343 B_Intermediate L2
ENSG00000079931 MOXD1 928298 sc-eQTL 9.47e-01 -0.00566 0.0849 0.343 B_Intermediate L2
ENSG00000079950 STX7 816575 sc-eQTL 1.17e-01 -0.0869 0.0553 0.343 B_Intermediate L2
ENSG00000112303 VNN2 566314 sc-eQTL 5.76e-01 0.0469 0.0837 0.343 B_Intermediate L2
ENSG00000112306 RPS12 515204 sc-eQTL 2.60e-01 0.0578 0.0511 0.343 B_Intermediate L2
ENSG00000118515 SGK1 -988339 sc-eQTL 3.25e-03 0.258 0.0868 0.343 B_Intermediate L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 7.18e-01 0.0334 0.0923 0.343 B_Intermediate L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 4.83e-02 -0.184 0.0929 0.343 B_Memory L2
ENSG00000079931 MOXD1 928298 sc-eQTL 8.24e-01 -0.0192 0.0865 0.343 B_Memory L2
ENSG00000079950 STX7 816575 sc-eQTL 9.54e-01 -0.00394 0.0678 0.343 B_Memory L2
ENSG00000112303 VNN2 566314 sc-eQTL 8.08e-01 0.0216 0.0887 0.343 B_Memory L2
ENSG00000112306 RPS12 515204 sc-eQTL 9.15e-01 0.00458 0.0428 0.343 B_Memory L2
ENSG00000118515 SGK1 -988339 sc-eQTL 9.73e-02 0.13 0.0779 0.343 B_Memory L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 7.84e-01 -0.0245 0.0892 0.343 B_Memory L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 5.22e-01 -0.0561 0.0876 0.344 B_Naive1 L2
ENSG00000079931 MOXD1 928298 sc-eQTL 8.29e-01 0.0208 0.0964 0.344 B_Naive1 L2
ENSG00000079950 STX7 816575 sc-eQTL 6.95e-01 -0.0166 0.0421 0.344 B_Naive1 L2
ENSG00000112303 VNN2 566314 sc-eQTL 4.36e-01 0.0638 0.0817 0.344 B_Naive1 L2
ENSG00000112306 RPS12 515204 sc-eQTL 1.88e-01 0.0613 0.0464 0.344 B_Naive1 L2
ENSG00000118515 SGK1 -988339 sc-eQTL 1.16e-01 0.114 0.0725 0.344 B_Naive1 L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 3.92e-01 -0.077 0.0898 0.344 B_Naive1 L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 4.24e-01 -0.0747 0.0933 0.343 B_Naive2 L2
ENSG00000079931 MOXD1 928298 sc-eQTL 2.77e-02 -0.2 0.0901 0.343 B_Naive2 L2
ENSG00000079950 STX7 816575 sc-eQTL 5.43e-01 -0.0302 0.0496 0.343 B_Naive2 L2
ENSG00000112303 VNN2 566314 sc-eQTL 8.24e-01 -0.0203 0.0911 0.343 B_Naive2 L2
ENSG00000112306 RPS12 515204 sc-eQTL 3.77e-01 0.0426 0.0482 0.343 B_Naive2 L2
ENSG00000118515 SGK1 -988339 sc-eQTL 4.78e-01 0.0605 0.0851 0.343 B_Naive2 L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 8.52e-01 0.0172 0.092 0.343 B_Naive2 L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 1.07e-01 0.15 0.0929 0.341 CD4_CTL L2
ENSG00000079950 STX7 816575 sc-eQTL 3.62e-01 0.0847 0.0926 0.341 CD4_CTL L2
ENSG00000112303 VNN2 566314 sc-eQTL 2.21e-01 -0.115 0.0933 0.341 CD4_CTL L2
ENSG00000112306 RPS12 515204 sc-eQTL 9.71e-03 0.111 0.0425 0.341 CD4_CTL L2
ENSG00000118515 SGK1 -988339 sc-eQTL 2.51e-01 0.0861 0.0748 0.341 CD4_CTL L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 5.44e-01 0.053 0.0872 0.341 CD4_CTL L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 8.89e-01 -0.0105 0.075 0.344 CD4_Naive L2
ENSG00000079950 STX7 816575 sc-eQTL 4.43e-01 0.0565 0.0734 0.344 CD4_Naive L2
ENSG00000112303 VNN2 566314 sc-eQTL 4.32e-01 0.0536 0.068 0.344 CD4_Naive L2
ENSG00000112306 RPS12 515204 sc-eQTL 3.15e-03 0.129 0.0433 0.344 CD4_Naive L2
ENSG00000118515 SGK1 -988339 sc-eQTL 6.10e-04 0.183 0.0526 0.344 CD4_Naive L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 9.57e-01 0.00457 0.0851 0.344 CD4_Naive L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 9.88e-01 -0.00125 0.0809 0.344 CD4_TCM L2
ENSG00000079950 STX7 816575 sc-eQTL 9.46e-01 -0.00549 0.0814 0.344 CD4_TCM L2
ENSG00000112303 VNN2 566314 sc-eQTL 9.18e-01 0.00828 0.0803 0.344 CD4_TCM L2
ENSG00000112306 RPS12 515204 sc-eQTL 4.22e-01 0.0334 0.0415 0.344 CD4_TCM L2
ENSG00000118515 SGK1 -988339 sc-eQTL 1.28e-01 0.0886 0.0579 0.344 CD4_TCM L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 8.15e-01 -0.0226 0.0964 0.344 CD4_TCM L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 8.09e-01 -0.0224 0.0926 0.344 CD4_TEM L2
ENSG00000079950 STX7 816575 sc-eQTL 7.45e-02 -0.165 0.092 0.344 CD4_TEM L2
ENSG00000112303 VNN2 566314 sc-eQTL 1.82e-01 0.119 0.0886 0.344 CD4_TEM L2
ENSG00000112306 RPS12 515204 sc-eQTL 1.21e-02 0.0909 0.0359 0.344 CD4_TEM L2
ENSG00000118515 SGK1 -988339 sc-eQTL 3.66e-02 0.13 0.062 0.344 CD4_TEM L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 5.87e-01 -0.0493 0.0906 0.344 CD4_TEM L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 5.22e-01 -0.0525 0.0819 0.344 CD8_CTL L2
ENSG00000079950 STX7 816575 sc-eQTL 7.66e-01 -0.0228 0.0766 0.344 CD8_CTL L2
ENSG00000112303 VNN2 566314 sc-eQTL 1.99e-01 -0.112 0.0867 0.344 CD8_CTL L2
ENSG00000112306 RPS12 515204 sc-eQTL 2.54e-01 0.0532 0.0465 0.344 CD8_CTL L2
ENSG00000118515 SGK1 -988339 sc-eQTL 1.20e-01 0.122 0.0783 0.344 CD8_CTL L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 5.86e-01 -0.0492 0.0902 0.344 CD8_CTL L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 5.02e-01 0.0582 0.0864 0.344 CD8_Naive L2
ENSG00000079950 STX7 816575 sc-eQTL 4.82e-01 -0.0649 0.0921 0.344 CD8_Naive L2
ENSG00000112303 VNN2 566314 sc-eQTL 3.79e-01 -0.07 0.0794 0.344 CD8_Naive L2
ENSG00000112306 RPS12 515204 sc-eQTL 1.56e-01 0.0645 0.0453 0.344 CD8_Naive L2
ENSG00000118515 SGK1 -988339 sc-eQTL 3.26e-03 0.167 0.056 0.344 CD8_Naive L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 5.26e-01 -0.058 0.0913 0.344 CD8_Naive L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 6.99e-01 0.0378 0.0976 0.331 CD8_TCM L2
ENSG00000079950 STX7 816575 sc-eQTL 9.41e-01 -0.0067 0.0904 0.331 CD8_TCM L2
ENSG00000112303 VNN2 566314 sc-eQTL 5.66e-01 -0.0515 0.0896 0.331 CD8_TCM L2
ENSG00000112306 RPS12 515204 sc-eQTL 3.26e-02 0.093 0.0432 0.331 CD8_TCM L2
ENSG00000118515 SGK1 -988339 sc-eQTL 1.07e-01 0.116 0.0719 0.331 CD8_TCM L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 9.36e-01 -0.00771 0.0958 0.331 CD8_TCM L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 2.01e-01 0.111 0.0866 0.349 CD8_TEM L2
ENSG00000079950 STX7 816575 sc-eQTL 6.70e-01 0.0405 0.0949 0.349 CD8_TEM L2
ENSG00000112303 VNN2 566314 sc-eQTL 6.36e-01 -0.0448 0.0944 0.349 CD8_TEM L2
ENSG00000112306 RPS12 515204 sc-eQTL 2.19e-01 0.0624 0.0506 0.349 CD8_TEM L2
ENSG00000118515 SGK1 -988339 sc-eQTL 1.78e-01 -0.112 0.0828 0.349 CD8_TEM L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 7.85e-01 -0.0263 0.096 0.349 CD8_TEM L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 5.71e-01 0.0515 0.0908 0.344 MAIT L2
ENSG00000079950 STX7 816575 sc-eQTL 8.17e-01 -0.0199 0.0863 0.344 MAIT L2
ENSG00000112303 VNN2 566314 sc-eQTL 9.41e-01 -0.00651 0.0878 0.344 MAIT L2
ENSG00000112306 RPS12 515204 sc-eQTL 8.37e-02 0.0745 0.0429 0.344 MAIT L2
ENSG00000118515 SGK1 -988339 sc-eQTL 3.32e-01 0.059 0.0606 0.344 MAIT L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 8.48e-01 -0.0174 0.0905 0.344 MAIT L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 4.35e-01 0.0765 0.0978 0.344 NK_CD56bright L2
ENSG00000079950 STX7 816575 sc-eQTL 9.04e-01 -0.011 0.0909 0.344 NK_CD56bright L2
ENSG00000112303 VNN2 566314 sc-eQTL 2.80e-01 0.0996 0.092 0.344 NK_CD56bright L2
ENSG00000112306 RPS12 515204 sc-eQTL 6.11e-01 -0.0262 0.0514 0.344 NK_CD56bright L2
ENSG00000118515 SGK1 -988339 sc-eQTL 1.10e-01 0.123 0.0764 0.344 NK_CD56bright L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 5.39e-01 0.0497 0.0807 0.343 NK_CD56dim L2
ENSG00000079950 STX7 816575 sc-eQTL 9.18e-02 -0.124 0.0734 0.343 NK_CD56dim L2
ENSG00000112303 VNN2 566314 sc-eQTL 8.82e-01 -0.0137 0.0925 0.343 NK_CD56dim L2
ENSG00000112306 RPS12 515204 sc-eQTL 4.30e-01 0.029 0.0366 0.343 NK_CD56dim L2
ENSG00000118515 SGK1 -988339 sc-eQTL 9.33e-01 0.00685 0.0813 0.343 NK_CD56dim L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 3.51e-01 -0.0935 0.1 0.354 NK_HLA L2
ENSG00000079950 STX7 816575 sc-eQTL 1.53e-01 -0.13 0.0908 0.354 NK_HLA L2
ENSG00000112303 VNN2 566314 sc-eQTL 8.42e-01 -0.0184 0.0923 0.354 NK_HLA L2
ENSG00000112306 RPS12 515204 sc-eQTL 8.21e-01 -0.00976 0.043 0.354 NK_HLA L2
ENSG00000118515 SGK1 -988339 sc-eQTL 6.87e-01 -0.0344 0.085 0.354 NK_HLA L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 6.61e-01 0.0361 0.0823 0.343 NK_cytokine L2
ENSG00000079950 STX7 816575 sc-eQTL 2.79e-01 -0.0863 0.0796 0.343 NK_cytokine L2
ENSG00000112303 VNN2 566314 sc-eQTL 9.29e-01 -0.00798 0.0897 0.343 NK_cytokine L2
ENSG00000112306 RPS12 515204 sc-eQTL 9.32e-01 0.00415 0.0487 0.343 NK_cytokine L2
ENSG00000118515 SGK1 -988339 sc-eQTL 2.67e-01 0.0899 0.0808 0.343 NK_cytokine L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 2.90e-01 0.125 0.118 0.363 PB L2
ENSG00000079931 MOXD1 928298 sc-eQTL 2.56e-01 -0.114 0.1 0.363 PB L2
ENSG00000079950 STX7 816575 sc-eQTL 4.63e-01 -0.0618 0.084 0.363 PB L2
ENSG00000112303 VNN2 566314 sc-eQTL 2.02e-01 -0.131 0.102 0.363 PB L2
ENSG00000112306 RPS12 515204 sc-eQTL 5.46e-01 0.0353 0.0583 0.363 PB L2
ENSG00000118515 SGK1 -988339 sc-eQTL 3.53e-01 0.0876 0.094 0.363 PB L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 4.68e-01 -0.0796 0.109 0.363 PB L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 3.41e-01 0.0884 0.0926 0.346 Pro_T L2
ENSG00000079950 STX7 816575 sc-eQTL 8.69e-01 -0.0137 0.0829 0.346 Pro_T L2
ENSG00000112303 VNN2 566314 sc-eQTL 8.28e-01 0.0194 0.0889 0.346 Pro_T L2
ENSG00000112306 RPS12 515204 sc-eQTL 2.72e-01 0.0369 0.0335 0.346 Pro_T L2
ENSG00000118515 SGK1 -988339 sc-eQTL 1.78e-01 0.0907 0.0671 0.346 Pro_T L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 5.23e-01 0.0556 0.087 0.346 Pro_T L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 5.29e-01 0.0594 0.0943 0.344 Treg L2
ENSG00000079950 STX7 816575 sc-eQTL 2.03e-01 0.113 0.0887 0.344 Treg L2
ENSG00000112303 VNN2 566314 sc-eQTL 8.58e-01 -0.0134 0.0749 0.344 Treg L2
ENSG00000112306 RPS12 515204 sc-eQTL 7.09e-01 0.0124 0.0331 0.344 Treg L2
ENSG00000118515 SGK1 -988339 sc-eQTL 2.58e-01 0.079 0.0696 0.344 Treg L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 1.01e-02 0.239 0.0921 0.344 Treg L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 3.23e-01 0.0965 0.0973 0.346 cDC L2
ENSG00000079950 STX7 816575 sc-eQTL 3.76e-01 -0.0678 0.0764 0.346 cDC L2
ENSG00000093134 VNN3 595008 sc-eQTL 4.83e-01 -0.0534 0.076 0.346 cDC L2
ENSG00000112299 VNN1 615718 sc-eQTL 6.62e-01 -0.0391 0.0894 0.346 cDC L2
ENSG00000112303 VNN2 566314 sc-eQTL 3.09e-01 -0.0886 0.0869 0.346 cDC L2
ENSG00000112306 RPS12 515204 sc-eQTL 7.12e-01 -0.0159 0.043 0.346 cDC L2
ENSG00000118515 SGK1 -988339 sc-eQTL 9.51e-01 -0.00442 0.0725 0.346 cDC L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 2.66e-01 0.0948 0.0849 0.346 cDC L2
ENSG00000286438 AL591115.1 226645 sc-eQTL 1.38e-02 -0.167 0.067 0.346 cDC L2
ENSG00000286887 AL355881.1 -966528 sc-eQTL 4.05e-01 0.0698 0.0837 0.346 cDC L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 8.98e-01 0.0102 0.0793 0.344 cMono_IL1B L2
ENSG00000079950 STX7 816575 sc-eQTL 9.34e-01 -0.00496 0.0602 0.344 cMono_IL1B L2
ENSG00000093134 VNN3 595008 sc-eQTL 5.13e-01 -0.0557 0.0849 0.344 cMono_IL1B L2
ENSG00000112299 VNN1 615718 sc-eQTL 6.49e-02 -0.158 0.0851 0.344 cMono_IL1B L2
ENSG00000112303 VNN2 566314 sc-eQTL 4.56e-01 -0.0511 0.0685 0.344 cMono_IL1B L2
ENSG00000112306 RPS12 515204 sc-eQTL 6.78e-01 0.0158 0.0381 0.344 cMono_IL1B L2
ENSG00000118515 SGK1 -988339 sc-eQTL 8.07e-01 -0.0139 0.0568 0.344 cMono_IL1B L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 6.94e-01 -0.0289 0.0735 0.344 cMono_IL1B L2
ENSG00000286887 AL355881.1 -966528 sc-eQTL 4.96e-01 0.0521 0.0764 0.344 cMono_IL1B L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 3.33e-01 0.0878 0.0905 0.344 cMono_S100A L2
ENSG00000079950 STX7 816575 sc-eQTL 9.08e-01 -0.00755 0.0655 0.344 cMono_S100A L2
ENSG00000093134 VNN3 595008 sc-eQTL 9.75e-01 0.00262 0.0818 0.344 cMono_S100A L2
ENSG00000112299 VNN1 615718 sc-eQTL 6.89e-01 -0.0356 0.0888 0.344 cMono_S100A L2
ENSG00000112303 VNN2 566314 sc-eQTL 3.67e-01 -0.0525 0.058 0.344 cMono_S100A L2
ENSG00000112306 RPS12 515204 sc-eQTL 4.76e-01 0.0299 0.0418 0.344 cMono_S100A L2
ENSG00000118515 SGK1 -988339 sc-eQTL 6.31e-01 0.023 0.0479 0.344 cMono_S100A L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 9.54e-01 -0.00443 0.0775 0.344 cMono_S100A L2
ENSG00000286887 AL355881.1 -966528 sc-eQTL 3.46e-01 -0.0714 0.0757 0.344 cMono_S100A L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 5.18e-01 -0.0724 0.112 0.345 gdT L2
ENSG00000079950 STX7 816575 sc-eQTL 1.14e-01 -0.152 0.0953 0.345 gdT L2
ENSG00000112303 VNN2 566314 sc-eQTL 9.35e-01 0.00875 0.106 0.345 gdT L2
ENSG00000112306 RPS12 515204 sc-eQTL 4.26e-01 0.0323 0.0404 0.345 gdT L2
ENSG00000118515 SGK1 -988339 sc-eQTL 1.69e-01 0.105 0.076 0.345 gdT L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 4.94e-01 -0.0717 0.105 0.345 gdT L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 6.52e-01 -0.0411 0.0909 0.338 intMono L2
ENSG00000079950 STX7 816575 sc-eQTL 7.09e-01 -0.0325 0.0869 0.338 intMono L2
ENSG00000093134 VNN3 595008 sc-eQTL 3.14e-01 -0.0884 0.0875 0.338 intMono L2
ENSG00000112299 VNN1 615718 sc-eQTL 8.12e-01 0.0206 0.0867 0.338 intMono L2
ENSG00000112303 VNN2 566314 sc-eQTL 7.37e-01 0.0296 0.0881 0.338 intMono L2
ENSG00000112306 RPS12 515204 sc-eQTL 9.00e-01 0.00482 0.0384 0.338 intMono L2
ENSG00000118515 SGK1 -988339 sc-eQTL 7.61e-01 0.0196 0.0644 0.338 intMono L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 9.79e-01 0.00241 0.0934 0.338 intMono L2
ENSG00000286887 AL355881.1 -966528 sc-eQTL 9.92e-01 -0.000883 0.0893 0.338 intMono L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 2.18e-01 0.115 0.0932 0.346 ncMono L2
ENSG00000079950 STX7 816575 sc-eQTL 3.80e-01 -0.0556 0.0631 0.346 ncMono L2
ENSG00000093134 VNN3 595008 sc-eQTL 8.43e-02 -0.154 0.0886 0.346 ncMono L2
ENSG00000112299 VNN1 615718 sc-eQTL 8.09e-02 -0.154 0.088 0.346 ncMono L2
ENSG00000112303 VNN2 566314 sc-eQTL 8.43e-01 -0.0169 0.0852 0.346 ncMono L2
ENSG00000112306 RPS12 515204 sc-eQTL 6.48e-01 -0.0195 0.0427 0.346 ncMono L2
ENSG00000118515 SGK1 -988339 sc-eQTL 8.03e-01 -0.0151 0.0605 0.346 ncMono L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 5.49e-01 -0.0452 0.0754 0.346 ncMono L2
ENSG00000286887 AL355881.1 -966528 sc-eQTL 4.34e-01 0.0624 0.0797 0.346 ncMono L2
ENSG00000028839 TBPL1 -622397 sc-eQTL 8.51e-02 0.19 0.109 0.345 pDC L2
ENSG00000079950 STX7 816575 sc-eQTL 4.06e-02 -0.15 0.0726 0.345 pDC L2
ENSG00000093134 VNN3 595008 sc-eQTL 2.69e-01 0.0819 0.0738 0.345 pDC L2
ENSG00000112299 VNN1 615718 sc-eQTL 8.76e-01 -0.0118 0.0754 0.345 pDC L2
ENSG00000112303 VNN2 566314 sc-eQTL 6.86e-01 0.0364 0.0897 0.345 pDC L2
ENSG00000112306 RPS12 515204 sc-eQTL 8.63e-01 0.0107 0.0618 0.345 pDC L2
ENSG00000118515 SGK1 -988339 sc-eQTL 8.21e-01 -0.0142 0.0628 0.345 pDC L2
ENSG00000146409 SLC18B1 516434 sc-eQTL 3.58e-01 0.0841 0.0912 0.345 pDC L2
ENSG00000286438 AL591115.1 226645 sc-eQTL 4.02e-01 -0.0733 0.0873 0.345 pDC L2
ENSG00000286887 AL355881.1 -966528 sc-eQTL 2.09e-01 -0.0974 0.0772 0.345 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -622397 sc-eQTL 7.24e-01 -0.0332 0.0937 0.344 B_Memory LOneK1K
ENSG00000079931 MOXD1 928298 sc-eQTL 7.78e-01 0.0258 0.0911 0.344 B_Memory LOneK1K
ENSG00000079950 STX7 816575 sc-eQTL 3.43e-01 -0.0489 0.0515 0.344 B_Memory LOneK1K
ENSG00000112303 VNN2 566314 sc-eQTL 6.30e-01 0.0393 0.0816 0.344 B_Memory LOneK1K
ENSG00000112306 RPS12 515204 sc-eQTL 3.46e-01 0.0438 0.0464 0.344 B_Memory LOneK1K
ENSG00000118515 SGK1 -988339 sc-eQTL 5.83e-03 0.199 0.0714 0.344 B_Memory LOneK1K
ENSG00000146409 SLC18B1 516434 sc-eQTL 8.77e-01 -0.0132 0.0854 0.344 B_Memory LOneK1K
ENSG00000028839 TBPL1 -622397 sc-eQTL 4.44e-01 -0.0674 0.0879 0.344 B_Naive LOneK1K
ENSG00000079931 MOXD1 928298 sc-eQTL 3.10e-01 -0.0981 0.0964 0.344 B_Naive LOneK1K
ENSG00000079950 STX7 816575 sc-eQTL 9.08e-01 -0.00456 0.0397 0.344 B_Naive LOneK1K
ENSG00000112303 VNN2 566314 sc-eQTL 8.45e-01 0.0151 0.077 0.344 B_Naive LOneK1K
ENSG00000112306 RPS12 515204 sc-eQTL 1.92e-01 0.0607 0.0464 0.344 B_Naive LOneK1K
ENSG00000118515 SGK1 -988339 sc-eQTL 1.24e-01 0.111 0.0717 0.344 B_Naive LOneK1K
ENSG00000146409 SLC18B1 516434 sc-eQTL 9.46e-01 -0.006 0.0879 0.344 B_Naive LOneK1K
ENSG00000028839 TBPL1 -622397 sc-eQTL 2.85e-01 0.077 0.0719 0.344 CD14_Mono LOneK1K
ENSG00000079950 STX7 816575 sc-eQTL 9.12e-01 0.00553 0.0501 0.344 CD14_Mono LOneK1K
ENSG00000093134 VNN3 595008 sc-eQTL 7.91e-01 -0.0217 0.0817 0.344 CD14_Mono LOneK1K
ENSG00000112299 VNN1 615718 sc-eQTL 3.19e-01 -0.0849 0.085 0.344 CD14_Mono LOneK1K
ENSG00000112303 VNN2 566314 sc-eQTL 5.88e-01 -0.0305 0.0563 0.344 CD14_Mono LOneK1K
ENSG00000112306 RPS12 515204 sc-eQTL 6.95e-01 0.0152 0.0386 0.344 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -988339 sc-eQTL 8.93e-01 -0.00707 0.0526 0.344 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 516434 sc-eQTL 8.66e-01 -0.0116 0.0687 0.344 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -966528 sc-eQTL 8.95e-01 -0.00955 0.0721 0.344 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -622397 sc-eQTL 8.67e-01 0.0154 0.0921 0.343 CD16_Mono LOneK1K
ENSG00000079950 STX7 816575 sc-eQTL 7.85e-01 -0.0166 0.0607 0.343 CD16_Mono LOneK1K
ENSG00000093134 VNN3 595008 sc-eQTL 1.26e-02 -0.221 0.088 0.343 CD16_Mono LOneK1K
ENSG00000112299 VNN1 615718 sc-eQTL 4.98e-02 -0.173 0.0877 0.343 CD16_Mono LOneK1K
ENSG00000112303 VNN2 566314 sc-eQTL 6.91e-01 -0.0333 0.0834 0.343 CD16_Mono LOneK1K
ENSG00000112306 RPS12 515204 sc-eQTL 7.93e-01 0.00928 0.0354 0.343 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -988339 sc-eQTL 9.14e-01 0.00582 0.0536 0.343 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 516434 sc-eQTL 6.50e-01 0.0391 0.086 0.343 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -966528 sc-eQTL 2.04e-01 0.0987 0.0775 0.343 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -622397 sc-eQTL 5.06e-01 0.0494 0.0742 0.343 NK_CD56dim LOneK1K
ENSG00000079950 STX7 816575 sc-eQTL 1.36e-02 -0.171 0.0687 0.343 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 566314 sc-eQTL 5.36e-01 -0.0547 0.0882 0.343 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 515204 sc-eQTL 5.50e-01 0.0216 0.036 0.343 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -988339 sc-eQTL 3.00e-01 0.0772 0.0742 0.343 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 615718 pQTL 0.00183 -0.112 0.0358 0.0 0.0 0.362

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina