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Genes within 1Mb (chr6:133325274:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -626896 sc-eQTL 5.19e-01 0.0528 0.0818 0.453 B L1
ENSG00000079931 MOXD1 923799 sc-eQTL 7.73e-01 0.025 0.0865 0.453 B L1
ENSG00000079950 STX7 812076 sc-eQTL 9.65e-01 -0.00145 0.0326 0.453 B L1
ENSG00000112303 VNN2 561815 sc-eQTL 7.45e-01 -0.02 0.0613 0.453 B L1
ENSG00000112306 RPS12 510705 sc-eQTL 9.60e-01 -0.00184 0.0371 0.453 B L1
ENSG00000118515 SGK1 -992838 sc-eQTL 7.16e-02 -0.103 0.0567 0.453 B L1
ENSG00000146409 SLC18B1 511935 sc-eQTL 9.06e-01 0.00927 0.078 0.453 B L1
ENSG00000028839 TBPL1 -626896 sc-eQTL 3.97e-01 -0.0512 0.0602 0.453 CD4T L1
ENSG00000079950 STX7 812076 sc-eQTL 8.97e-02 -0.106 0.0623 0.453 CD4T L1
ENSG00000112303 VNN2 561815 sc-eQTL 2.74e-01 0.0594 0.0542 0.453 CD4T L1
ENSG00000112306 RPS12 510705 sc-eQTL 6.25e-01 -0.0181 0.0369 0.453 CD4T L1
ENSG00000118515 SGK1 -992838 sc-eQTL 3.50e-02 -0.104 0.0491 0.453 CD4T L1
ENSG00000146409 SLC18B1 511935 sc-eQTL 7.49e-01 -0.024 0.0747 0.453 CD4T L1
ENSG00000028839 TBPL1 -626896 sc-eQTL 8.70e-01 0.00984 0.0599 0.453 CD8T L1
ENSG00000079950 STX7 812076 sc-eQTL 4.27e-03 0.177 0.0613 0.453 CD8T L1
ENSG00000112303 VNN2 561815 sc-eQTL 1.19e-01 0.114 0.0726 0.453 CD8T L1
ENSG00000112306 RPS12 510705 sc-eQTL 3.50e-01 0.0233 0.0249 0.453 CD8T L1
ENSG00000118515 SGK1 -992838 sc-eQTL 3.95e-01 -0.0327 0.0384 0.453 CD8T L1
ENSG00000146409 SLC18B1 511935 sc-eQTL 3.28e-01 0.0737 0.0752 0.453 CD8T L1
ENSG00000028839 TBPL1 -626896 sc-eQTL 4.94e-01 0.0622 0.0909 0.45 DC L1
ENSG00000079950 STX7 812076 sc-eQTL 9.27e-01 -0.00518 0.0565 0.45 DC L1
ENSG00000093134 VNN3 590509 sc-eQTL 6.13e-02 0.131 0.0695 0.45 DC L1
ENSG00000112299 VNN1 611219 sc-eQTL 6.57e-01 -0.0337 0.0756 0.45 DC L1
ENSG00000112303 VNN2 561815 sc-eQTL 6.21e-01 0.04 0.0809 0.45 DC L1
ENSG00000112306 RPS12 510705 sc-eQTL 3.53e-01 0.0422 0.0453 0.45 DC L1
ENSG00000118515 SGK1 -992838 sc-eQTL 8.38e-01 0.0108 0.0527 0.45 DC L1
ENSG00000146409 SLC18B1 511935 sc-eQTL 3.60e-01 -0.0658 0.0717 0.45 DC L1
ENSG00000286438 AL591115.1 222146 sc-eQTL 4.72e-01 0.047 0.0653 0.45 DC L1
ENSG00000286887 AL355881.1 -971027 sc-eQTL 6.83e-01 -0.0333 0.0815 0.45 DC L1
ENSG00000028839 TBPL1 -626896 sc-eQTL 4.57e-02 -0.126 0.0627 0.453 Mono L1
ENSG00000079950 STX7 812076 sc-eQTL 4.10e-01 -0.0349 0.0423 0.453 Mono L1
ENSG00000093134 VNN3 590509 sc-eQTL 2.97e-01 0.0758 0.0725 0.453 Mono L1
ENSG00000112299 VNN1 611219 sc-eQTL 3.03e-01 -0.0807 0.078 0.453 Mono L1
ENSG00000112303 VNN2 561815 sc-eQTL 2.55e-02 0.123 0.0546 0.453 Mono L1
ENSG00000112306 RPS12 510705 sc-eQTL 6.78e-01 -0.0138 0.0331 0.453 Mono L1
ENSG00000118515 SGK1 -992838 sc-eQTL 6.78e-01 0.0194 0.0467 0.453 Mono L1
ENSG00000146409 SLC18B1 511935 sc-eQTL 7.15e-01 -0.0239 0.0654 0.453 Mono L1
ENSG00000286887 AL355881.1 -971027 sc-eQTL 6.92e-01 -0.0255 0.0643 0.453 Mono L1
ENSG00000028839 TBPL1 -626896 sc-eQTL 4.52e-02 -0.139 0.0688 0.453 NK L1
ENSG00000079950 STX7 812076 sc-eQTL 4.48e-01 0.0487 0.0641 0.453 NK L1
ENSG00000112303 VNN2 561815 sc-eQTL 4.41e-01 0.0616 0.0798 0.453 NK L1
ENSG00000112306 RPS12 510705 sc-eQTL 9.68e-01 -0.00135 0.0331 0.453 NK L1
ENSG00000118515 SGK1 -992838 sc-eQTL 2.18e-01 0.0753 0.0609 0.453 NK L1
ENSG00000028839 TBPL1 -626896 sc-eQTL 1.79e-01 0.11 0.0815 0.453 Other_T L1
ENSG00000079950 STX7 812076 sc-eQTL 2.19e-01 0.079 0.0642 0.453 Other_T L1
ENSG00000112303 VNN2 561815 sc-eQTL 5.51e-01 -0.0465 0.0778 0.453 Other_T L1
ENSG00000112306 RPS12 510705 sc-eQTL 6.97e-01 0.012 0.0309 0.453 Other_T L1
ENSG00000118515 SGK1 -992838 sc-eQTL 5.06e-01 -0.0378 0.0567 0.453 Other_T L1
ENSG00000146409 SLC18B1 511935 sc-eQTL 8.84e-01 -0.0124 0.0845 0.453 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -626896 sc-eQTL 5.86e-01 0.0517 0.0948 0.439 B_Activated L2
ENSG00000079931 MOXD1 923799 sc-eQTL 6.76e-01 -0.0363 0.0866 0.439 B_Activated L2
ENSG00000079950 STX7 812076 sc-eQTL 5.70e-01 0.0462 0.0812 0.439 B_Activated L2
ENSG00000112303 VNN2 561815 sc-eQTL 2.38e-01 -0.102 0.0861 0.439 B_Activated L2
ENSG00000112306 RPS12 510705 sc-eQTL 4.45e-01 0.0354 0.0463 0.439 B_Activated L2
ENSG00000118515 SGK1 -992838 sc-eQTL 1.67e-01 -0.114 0.0822 0.439 B_Activated L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 7.08e-01 0.0304 0.0811 0.439 B_Activated L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 1.63e-01 -0.126 0.0902 0.453 B_Intermediate L2
ENSG00000079931 MOXD1 923799 sc-eQTL 3.94e-01 0.0678 0.0794 0.453 B_Intermediate L2
ENSG00000079950 STX7 812076 sc-eQTL 8.51e-01 0.00981 0.0521 0.453 B_Intermediate L2
ENSG00000112303 VNN2 561815 sc-eQTL 5.26e-01 0.0498 0.0784 0.453 B_Intermediate L2
ENSG00000112306 RPS12 510705 sc-eQTL 8.15e-01 -0.0112 0.048 0.453 B_Intermediate L2
ENSG00000118515 SGK1 -992838 sc-eQTL 4.62e-03 -0.233 0.0815 0.453 B_Intermediate L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 6.84e-01 -0.0353 0.0865 0.453 B_Intermediate L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 2.43e-01 0.103 0.0878 0.455 B_Memory L2
ENSG00000079931 MOXD1 923799 sc-eQTL 8.54e-01 -0.0149 0.0812 0.455 B_Memory L2
ENSG00000079950 STX7 812076 sc-eQTL 2.94e-01 0.0669 0.0636 0.455 B_Memory L2
ENSG00000112303 VNN2 561815 sc-eQTL 9.73e-01 -0.00279 0.0834 0.455 B_Memory L2
ENSG00000112306 RPS12 510705 sc-eQTL 8.58e-01 -0.00717 0.0402 0.455 B_Memory L2
ENSG00000118515 SGK1 -992838 sc-eQTL 1.36e-01 -0.11 0.0733 0.455 B_Memory L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 4.78e-01 -0.0595 0.0837 0.455 B_Memory L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 9.39e-01 0.00619 0.0811 0.453 B_Naive1 L2
ENSG00000079931 MOXD1 923799 sc-eQTL 7.87e-01 0.0241 0.0892 0.453 B_Naive1 L2
ENSG00000079950 STX7 812076 sc-eQTL 7.15e-01 -0.0143 0.039 0.453 B_Naive1 L2
ENSG00000112303 VNN2 561815 sc-eQTL 5.08e-01 -0.0501 0.0757 0.453 B_Naive1 L2
ENSG00000112306 RPS12 510705 sc-eQTL 4.13e-01 -0.0354 0.0431 0.453 B_Naive1 L2
ENSG00000118515 SGK1 -992838 sc-eQTL 1.55e-01 -0.096 0.0672 0.453 B_Naive1 L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 2.78e-01 0.0903 0.083 0.453 B_Naive1 L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 7.64e-02 0.154 0.0865 0.455 B_Naive2 L2
ENSG00000079931 MOXD1 923799 sc-eQTL 6.84e-01 0.0347 0.085 0.455 B_Naive2 L2
ENSG00000079950 STX7 812076 sc-eQTL 2.19e-01 0.0569 0.0461 0.455 B_Naive2 L2
ENSG00000112303 VNN2 561815 sc-eQTL 7.01e-01 0.0327 0.085 0.455 B_Naive2 L2
ENSG00000112306 RPS12 510705 sc-eQTL 6.11e-01 -0.0229 0.045 0.455 B_Naive2 L2
ENSG00000118515 SGK1 -992838 sc-eQTL 4.01e-01 -0.0668 0.0794 0.455 B_Naive2 L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 9.31e-01 0.00743 0.0859 0.455 B_Naive2 L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 2.93e-01 -0.0924 0.0876 0.457 CD4_CTL L2
ENSG00000079950 STX7 812076 sc-eQTL 1.41e-01 -0.128 0.0868 0.457 CD4_CTL L2
ENSG00000112303 VNN2 561815 sc-eQTL 5.08e-01 0.0582 0.0879 0.457 CD4_CTL L2
ENSG00000112306 RPS12 510705 sc-eQTL 4.66e-01 -0.0297 0.0406 0.457 CD4_CTL L2
ENSG00000118515 SGK1 -992838 sc-eQTL 3.60e-02 -0.147 0.0697 0.457 CD4_CTL L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 3.31e-01 -0.0798 0.0818 0.457 CD4_CTL L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 3.58e-01 0.0633 0.0688 0.453 CD4_Naive L2
ENSG00000079950 STX7 812076 sc-eQTL 7.39e-02 -0.121 0.0671 0.453 CD4_Naive L2
ENSG00000112303 VNN2 561815 sc-eQTL 6.49e-01 0.0285 0.0626 0.453 CD4_Naive L2
ENSG00000112306 RPS12 510705 sc-eQTL 2.26e-01 -0.0491 0.0405 0.453 CD4_Naive L2
ENSG00000118515 SGK1 -992838 sc-eQTL 2.62e-02 -0.11 0.0492 0.453 CD4_Naive L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 9.86e-01 -0.00134 0.0782 0.453 CD4_Naive L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 5.68e-01 -0.0423 0.074 0.453 CD4_TCM L2
ENSG00000079950 STX7 812076 sc-eQTL 9.25e-01 -0.00703 0.0746 0.453 CD4_TCM L2
ENSG00000112303 VNN2 561815 sc-eQTL 6.59e-02 0.135 0.0729 0.453 CD4_TCM L2
ENSG00000112306 RPS12 510705 sc-eQTL 3.41e-01 0.0363 0.038 0.453 CD4_TCM L2
ENSG00000118515 SGK1 -992838 sc-eQTL 2.31e-01 -0.0638 0.0531 0.453 CD4_TCM L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 7.19e-01 -0.0318 0.0882 0.453 CD4_TCM L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 5.77e-01 -0.0488 0.0875 0.453 CD4_TEM L2
ENSG00000079950 STX7 812076 sc-eQTL 5.57e-02 0.167 0.0869 0.453 CD4_TEM L2
ENSG00000112303 VNN2 561815 sc-eQTL 3.39e-01 -0.0804 0.0839 0.453 CD4_TEM L2
ENSG00000112306 RPS12 510705 sc-eQTL 6.40e-01 -0.0162 0.0345 0.453 CD4_TEM L2
ENSG00000118515 SGK1 -992838 sc-eQTL 2.54e-01 -0.0676 0.0591 0.453 CD4_TEM L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 8.22e-01 0.0193 0.0857 0.453 CD4_TEM L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 9.31e-01 0.00659 0.0755 0.453 CD8_CTL L2
ENSG00000079950 STX7 812076 sc-eQTL 6.84e-03 0.189 0.0694 0.453 CD8_CTL L2
ENSG00000112303 VNN2 561815 sc-eQTL 3.71e-01 0.0717 0.08 0.453 CD8_CTL L2
ENSG00000112306 RPS12 510705 sc-eQTL 4.70e-01 0.031 0.0429 0.453 CD8_CTL L2
ENSG00000118515 SGK1 -992838 sc-eQTL 1.98e-01 -0.0933 0.0722 0.453 CD8_CTL L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 9.25e-02 0.14 0.0826 0.453 CD8_CTL L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 3.85e-01 -0.0702 0.0806 0.453 CD8_Naive L2
ENSG00000079950 STX7 812076 sc-eQTL 1.11e-01 0.137 0.0855 0.453 CD8_Naive L2
ENSG00000112303 VNN2 561815 sc-eQTL 9.03e-02 0.126 0.0738 0.453 CD8_Naive L2
ENSG00000112306 RPS12 510705 sc-eQTL 8.22e-01 -0.00957 0.0425 0.453 CD8_Naive L2
ENSG00000118515 SGK1 -992838 sc-eQTL 9.29e-02 -0.0895 0.053 0.453 CD8_Naive L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 8.40e-01 0.0172 0.0853 0.453 CD8_Naive L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 6.48e-01 -0.0422 0.0923 0.465 CD8_TCM L2
ENSG00000079950 STX7 812076 sc-eQTL 6.79e-01 0.0354 0.0855 0.465 CD8_TCM L2
ENSG00000112303 VNN2 561815 sc-eQTL 9.71e-01 -0.00304 0.0849 0.465 CD8_TCM L2
ENSG00000112306 RPS12 510705 sc-eQTL 2.43e-01 -0.0482 0.0412 0.465 CD8_TCM L2
ENSG00000118515 SGK1 -992838 sc-eQTL 1.60e-01 -0.0961 0.0682 0.465 CD8_TCM L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 2.41e-01 0.106 0.0903 0.465 CD8_TCM L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 3.19e-01 -0.0829 0.083 0.447 CD8_TEM L2
ENSG00000079950 STX7 812076 sc-eQTL 6.90e-01 -0.0363 0.0908 0.447 CD8_TEM L2
ENSG00000112303 VNN2 561815 sc-eQTL 1.62e-01 -0.126 0.0899 0.447 CD8_TEM L2
ENSG00000112306 RPS12 510705 sc-eQTL 5.21e-01 -0.0312 0.0485 0.447 CD8_TEM L2
ENSG00000118515 SGK1 -992838 sc-eQTL 6.54e-01 0.0358 0.0796 0.447 CD8_TEM L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 6.52e-01 -0.0415 0.0918 0.447 CD8_TEM L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 9.55e-01 -0.00494 0.0866 0.455 MAIT L2
ENSG00000079950 STX7 812076 sc-eQTL 7.00e-01 -0.0317 0.0822 0.455 MAIT L2
ENSG00000112303 VNN2 561815 sc-eQTL 6.97e-01 0.0326 0.0836 0.455 MAIT L2
ENSG00000112306 RPS12 510705 sc-eQTL 7.39e-01 -0.0137 0.0411 0.455 MAIT L2
ENSG00000118515 SGK1 -992838 sc-eQTL 5.97e-01 -0.0306 0.0579 0.455 MAIT L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 6.02e-01 -0.045 0.0862 0.455 MAIT L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 4.17e-01 0.0745 0.0916 0.451 NK_CD56bright L2
ENSG00000079950 STX7 812076 sc-eQTL 9.84e-01 -0.00174 0.0851 0.451 NK_CD56bright L2
ENSG00000112303 VNN2 561815 sc-eQTL 7.39e-01 0.0288 0.0864 0.451 NK_CD56bright L2
ENSG00000112306 RPS12 510705 sc-eQTL 2.94e-01 0.0505 0.048 0.451 NK_CD56bright L2
ENSG00000118515 SGK1 -992838 sc-eQTL 8.60e-01 -0.0127 0.072 0.451 NK_CD56bright L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 2.58e-02 -0.166 0.0739 0.453 NK_CD56dim L2
ENSG00000079950 STX7 812076 sc-eQTL 4.46e-01 0.0522 0.0683 0.453 NK_CD56dim L2
ENSG00000112303 VNN2 561815 sc-eQTL 3.47e-01 0.0805 0.0854 0.453 NK_CD56dim L2
ENSG00000112306 RPS12 510705 sc-eQTL 8.78e-01 0.00521 0.034 0.453 NK_CD56dim L2
ENSG00000118515 SGK1 -992838 sc-eQTL 2.39e-01 0.0885 0.075 0.453 NK_CD56dim L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 8.94e-01 -0.0125 0.0938 0.447 NK_HLA L2
ENSG00000079950 STX7 812076 sc-eQTL 5.70e-02 0.162 0.0846 0.447 NK_HLA L2
ENSG00000112303 VNN2 561815 sc-eQTL 3.63e-01 -0.0787 0.0863 0.447 NK_HLA L2
ENSG00000112306 RPS12 510705 sc-eQTL 6.63e-01 0.0176 0.0403 0.447 NK_HLA L2
ENSG00000118515 SGK1 -992838 sc-eQTL 6.41e-01 0.0372 0.0796 0.447 NK_HLA L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 1.52e-01 -0.111 0.0775 0.453 NK_cytokine L2
ENSG00000079950 STX7 812076 sc-eQTL 5.94e-01 -0.0402 0.0753 0.453 NK_cytokine L2
ENSG00000112303 VNN2 561815 sc-eQTL 9.86e-01 0.00147 0.0848 0.453 NK_cytokine L2
ENSG00000112306 RPS12 510705 sc-eQTL 8.04e-01 0.0114 0.046 0.453 NK_cytokine L2
ENSG00000118515 SGK1 -992838 sc-eQTL 9.29e-01 0.00686 0.0765 0.453 NK_cytokine L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 5.25e-01 -0.0679 0.106 0.444 PB L2
ENSG00000079931 MOXD1 923799 sc-eQTL 6.48e-01 0.0416 0.0909 0.444 PB L2
ENSG00000079950 STX7 812076 sc-eQTL 3.33e-02 0.16 0.0744 0.444 PB L2
ENSG00000112303 VNN2 561815 sc-eQTL 4.23e-01 0.0744 0.0925 0.444 PB L2
ENSG00000112306 RPS12 510705 sc-eQTL 4.06e-01 -0.0438 0.0525 0.444 PB L2
ENSG00000118515 SGK1 -992838 sc-eQTL 1.84e-01 -0.113 0.0844 0.444 PB L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 4.26e-01 0.0787 0.0985 0.444 PB L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 9.88e-01 -0.00129 0.0885 0.452 Pro_T L2
ENSG00000079950 STX7 812076 sc-eQTL 9.54e-02 0.131 0.0785 0.452 Pro_T L2
ENSG00000112303 VNN2 561815 sc-eQTL 8.08e-01 0.0206 0.0847 0.452 Pro_T L2
ENSG00000112306 RPS12 510705 sc-eQTL 7.55e-01 0.01 0.032 0.452 Pro_T L2
ENSG00000118515 SGK1 -992838 sc-eQTL 6.08e-01 -0.0329 0.0642 0.452 Pro_T L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 8.01e-01 -0.021 0.0829 0.452 Pro_T L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 8.54e-01 -0.0164 0.089 0.453 Treg L2
ENSG00000079950 STX7 812076 sc-eQTL 2.79e-02 -0.184 0.083 0.453 Treg L2
ENSG00000112303 VNN2 561815 sc-eQTL 8.97e-01 -0.00916 0.0706 0.453 Treg L2
ENSG00000112306 RPS12 510705 sc-eQTL 9.43e-01 0.00223 0.0312 0.453 Treg L2
ENSG00000118515 SGK1 -992838 sc-eQTL 5.84e-01 -0.036 0.0658 0.453 Treg L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 7.96e-02 -0.154 0.0876 0.453 Treg L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 2.92e-01 0.0975 0.0922 0.451 cDC L2
ENSG00000079950 STX7 812076 sc-eQTL 8.37e-01 0.015 0.0726 0.451 cDC L2
ENSG00000093134 VNN3 590509 sc-eQTL 4.34e-02 0.145 0.0713 0.451 cDC L2
ENSG00000112299 VNN1 611219 sc-eQTL 7.28e-01 -0.0295 0.0848 0.451 cDC L2
ENSG00000112303 VNN2 561815 sc-eQTL 4.67e-01 0.0602 0.0825 0.451 cDC L2
ENSG00000112306 RPS12 510705 sc-eQTL 1.31e-01 0.0616 0.0405 0.451 cDC L2
ENSG00000118515 SGK1 -992838 sc-eQTL 7.95e-01 -0.0179 0.0687 0.451 cDC L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 9.86e-01 -0.00137 0.0808 0.451 cDC L2
ENSG00000286438 AL591115.1 222146 sc-eQTL 2.12e-01 0.0806 0.0643 0.451 cDC L2
ENSG00000286887 AL355881.1 -971027 sc-eQTL 1.45e-01 -0.116 0.079 0.451 cDC L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 2.68e-01 -0.0801 0.0721 0.453 cMono_IL1B L2
ENSG00000079950 STX7 812076 sc-eQTL 9.20e-01 -0.00551 0.0549 0.453 cMono_IL1B L2
ENSG00000093134 VNN3 590509 sc-eQTL 4.13e-01 0.0635 0.0774 0.453 cMono_IL1B L2
ENSG00000112299 VNN1 611219 sc-eQTL 5.94e-01 -0.0418 0.0782 0.453 cMono_IL1B L2
ENSG00000112303 VNN2 561815 sc-eQTL 1.53e-01 0.0893 0.0623 0.453 cMono_IL1B L2
ENSG00000112306 RPS12 510705 sc-eQTL 5.40e-01 -0.0213 0.0347 0.453 cMono_IL1B L2
ENSG00000118515 SGK1 -992838 sc-eQTL 4.56e-01 0.0386 0.0518 0.453 cMono_IL1B L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 2.54e-01 -0.0765 0.0668 0.453 cMono_IL1B L2
ENSG00000286887 AL355881.1 -971027 sc-eQTL 7.23e-01 -0.0248 0.0698 0.453 cMono_IL1B L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 2.43e-01 -0.0962 0.0822 0.453 cMono_S100A L2
ENSG00000079950 STX7 812076 sc-eQTL 2.00e-01 -0.0763 0.0593 0.453 cMono_S100A L2
ENSG00000093134 VNN3 590509 sc-eQTL 5.44e-01 -0.0452 0.0743 0.453 cMono_S100A L2
ENSG00000112299 VNN1 611219 sc-eQTL 1.13e-01 -0.128 0.0803 0.453 cMono_S100A L2
ENSG00000112303 VNN2 561815 sc-eQTL 9.34e-02 0.0886 0.0526 0.453 cMono_S100A L2
ENSG00000112306 RPS12 510705 sc-eQTL 3.63e-01 -0.0347 0.038 0.453 cMono_S100A L2
ENSG00000118515 SGK1 -992838 sc-eQTL 7.24e-01 -0.0154 0.0436 0.453 cMono_S100A L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 3.94e-01 0.0602 0.0704 0.453 cMono_S100A L2
ENSG00000286887 AL355881.1 -971027 sc-eQTL 4.92e-01 0.0475 0.0689 0.453 cMono_S100A L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 5.69e-01 0.0655 0.115 0.445 gdT L2
ENSG00000079950 STX7 812076 sc-eQTL 7.11e-01 0.0366 0.0987 0.445 gdT L2
ENSG00000112303 VNN2 561815 sc-eQTL 3.88e-01 -0.0944 0.109 0.445 gdT L2
ENSG00000112306 RPS12 510705 sc-eQTL 6.95e-01 0.0163 0.0416 0.445 gdT L2
ENSG00000118515 SGK1 -992838 sc-eQTL 5.51e-01 -0.0469 0.0784 0.445 gdT L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 6.10e-01 0.0549 0.107 0.445 gdT L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 2.32e-01 -0.1 0.0835 0.458 intMono L2
ENSG00000079950 STX7 812076 sc-eQTL 7.60e-01 -0.0244 0.08 0.458 intMono L2
ENSG00000093134 VNN3 590509 sc-eQTL 4.24e-02 0.163 0.0799 0.458 intMono L2
ENSG00000112299 VNN1 611219 sc-eQTL 4.96e-01 -0.0543 0.0798 0.458 intMono L2
ENSG00000112303 VNN2 561815 sc-eQTL 7.94e-01 -0.0212 0.0811 0.458 intMono L2
ENSG00000112306 RPS12 510705 sc-eQTL 9.79e-01 0.00092 0.0353 0.458 intMono L2
ENSG00000118515 SGK1 -992838 sc-eQTL 4.92e-01 0.0408 0.0592 0.458 intMono L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 9.65e-01 -0.00376 0.086 0.458 intMono L2
ENSG00000286887 AL355881.1 -971027 sc-eQTL 2.73e-01 -0.0901 0.082 0.458 intMono L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 1.77e-01 -0.12 0.0887 0.455 ncMono L2
ENSG00000079950 STX7 812076 sc-eQTL 4.20e-01 0.0487 0.0602 0.455 ncMono L2
ENSG00000093134 VNN3 590509 sc-eQTL 6.91e-02 0.154 0.0843 0.455 ncMono L2
ENSG00000112299 VNN1 611219 sc-eQTL 5.58e-01 -0.0494 0.0844 0.455 ncMono L2
ENSG00000112303 VNN2 561815 sc-eQTL 4.63e-01 0.0596 0.0811 0.455 ncMono L2
ENSG00000112306 RPS12 510705 sc-eQTL 8.13e-01 0.00963 0.0407 0.455 ncMono L2
ENSG00000118515 SGK1 -992838 sc-eQTL 8.59e-01 0.0102 0.0576 0.455 ncMono L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 3.27e-01 0.0706 0.0717 0.455 ncMono L2
ENSG00000286887 AL355881.1 -971027 sc-eQTL 7.98e-01 0.0194 0.076 0.455 ncMono L2
ENSG00000028839 TBPL1 -626896 sc-eQTL 6.97e-01 -0.0414 0.106 0.446 pDC L2
ENSG00000079950 STX7 812076 sc-eQTL 3.44e-01 0.067 0.0706 0.446 pDC L2
ENSG00000093134 VNN3 590509 sc-eQTL 5.47e-01 0.043 0.0712 0.446 pDC L2
ENSG00000112299 VNN1 611219 sc-eQTL 6.21e-01 -0.0359 0.0725 0.446 pDC L2
ENSG00000112303 VNN2 561815 sc-eQTL 3.34e-01 0.0834 0.0861 0.446 pDC L2
ENSG00000112306 RPS12 510705 sc-eQTL 1.89e-01 0.078 0.0591 0.446 pDC L2
ENSG00000118515 SGK1 -992838 sc-eQTL 6.65e-01 0.0262 0.0604 0.446 pDC L2
ENSG00000146409 SLC18B1 511935 sc-eQTL 6.42e-01 0.041 0.088 0.446 pDC L2
ENSG00000286438 AL591115.1 222146 sc-eQTL 3.48e-01 0.079 0.084 0.446 pDC L2
ENSG00000286887 AL355881.1 -971027 sc-eQTL 9.49e-01 -0.00483 0.0747 0.446 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -626896 sc-eQTL 5.54e-01 -0.052 0.0878 0.453 B_Memory LOneK1K
ENSG00000079931 MOXD1 923799 sc-eQTL 5.02e-01 0.0574 0.0853 0.453 B_Memory LOneK1K
ENSG00000079950 STX7 812076 sc-eQTL 7.36e-01 0.0163 0.0484 0.453 B_Memory LOneK1K
ENSG00000112303 VNN2 561815 sc-eQTL 9.04e-01 -0.00919 0.0765 0.453 B_Memory LOneK1K
ENSG00000112306 RPS12 510705 sc-eQTL 8.03e-01 -0.0109 0.0436 0.453 B_Memory LOneK1K
ENSG00000118515 SGK1 -992838 sc-eQTL 7.57e-03 -0.181 0.067 0.453 B_Memory LOneK1K
ENSG00000146409 SLC18B1 511935 sc-eQTL 8.19e-01 -0.0183 0.08 0.453 B_Memory LOneK1K
ENSG00000028839 TBPL1 -626896 sc-eQTL 3.05e-01 0.0837 0.0815 0.453 B_Naive LOneK1K
ENSG00000079931 MOXD1 923799 sc-eQTL 6.41e-01 0.0418 0.0896 0.453 B_Naive LOneK1K
ENSG00000079950 STX7 812076 sc-eQTL 8.30e-01 0.0079 0.0368 0.453 B_Naive LOneK1K
ENSG00000112303 VNN2 561815 sc-eQTL 9.31e-01 -0.0062 0.0714 0.453 B_Naive LOneK1K
ENSG00000112306 RPS12 510705 sc-eQTL 6.15e-01 -0.0218 0.0432 0.453 B_Naive LOneK1K
ENSG00000118515 SGK1 -992838 sc-eQTL 1.85e-01 -0.0887 0.0666 0.453 B_Naive LOneK1K
ENSG00000146409 SLC18B1 511935 sc-eQTL 4.84e-01 0.0571 0.0814 0.453 B_Naive LOneK1K
ENSG00000028839 TBPL1 -626896 sc-eQTL 9.47e-02 -0.11 0.0653 0.453 CD14_Mono LOneK1K
ENSG00000079950 STX7 812076 sc-eQTL 3.38e-01 -0.0438 0.0456 0.453 CD14_Mono LOneK1K
ENSG00000093134 VNN3 590509 sc-eQTL 5.67e-01 0.0427 0.0745 0.453 CD14_Mono LOneK1K
ENSG00000112299 VNN1 611219 sc-eQTL 2.40e-01 -0.0913 0.0775 0.453 CD14_Mono LOneK1K
ENSG00000112303 VNN2 561815 sc-eQTL 9.39e-02 0.0859 0.0511 0.453 CD14_Mono LOneK1K
ENSG00000112306 RPS12 510705 sc-eQTL 6.34e-01 -0.0168 0.0352 0.453 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -992838 sc-eQTL 6.62e-01 0.021 0.048 0.453 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 511935 sc-eQTL 6.78e-01 -0.0261 0.0627 0.453 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -971027 sc-eQTL 8.78e-01 0.0101 0.0658 0.453 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -626896 sc-eQTL 1.31e-01 -0.129 0.0853 0.453 CD16_Mono LOneK1K
ENSG00000079950 STX7 812076 sc-eQTL 7.33e-01 0.0193 0.0565 0.453 CD16_Mono LOneK1K
ENSG00000093134 VNN3 590509 sc-eQTL 1.22e-03 0.266 0.0812 0.453 CD16_Mono LOneK1K
ENSG00000112299 VNN1 611219 sc-eQTL 9.68e-01 0.00327 0.0825 0.453 CD16_Mono LOneK1K
ENSG00000112303 VNN2 561815 sc-eQTL 3.90e-01 0.0668 0.0776 0.453 CD16_Mono LOneK1K
ENSG00000112306 RPS12 510705 sc-eQTL 6.10e-01 -0.0169 0.033 0.453 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -992838 sc-eQTL 6.64e-01 0.0217 0.0499 0.453 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 511935 sc-eQTL 6.86e-01 0.0324 0.0801 0.453 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -971027 sc-eQTL 9.57e-02 -0.12 0.0719 0.453 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -626896 sc-eQTL 1.86e-02 -0.161 0.0679 0.453 NK_CD56dim LOneK1K
ENSG00000079950 STX7 812076 sc-eQTL 5.01e-01 0.0435 0.0645 0.453 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 561815 sc-eQTL 4.39e-01 0.0633 0.0816 0.453 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 510705 sc-eQTL 9.36e-01 0.00268 0.0334 0.453 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -992838 sc-eQTL 5.56e-01 0.0407 0.0689 0.453 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 611219 pQTL 0.00378 -0.102 0.0352 0.0 0.0 0.42

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina