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Genes within 1Mb (chr6:133318271:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -633899 sc-eQTL 5.03e-01 -0.0593 0.0883 0.348 B L1
ENSG00000079931 MOXD1 916796 sc-eQTL 7.29e-01 -0.0324 0.0933 0.348 B L1
ENSG00000079950 STX7 805073 sc-eQTL 6.93e-01 -0.0139 0.0352 0.348 B L1
ENSG00000112303 VNN2 554812 sc-eQTL 5.32e-01 0.0414 0.0661 0.348 B L1
ENSG00000112306 RPS12 503702 sc-eQTL 9.84e-01 -0.000809 0.04 0.348 B L1
ENSG00000118515 SGK1 -999841 sc-eQTL 3.73e-02 0.128 0.0611 0.348 B L1
ENSG00000146409 SLC18B1 504932 sc-eQTL 6.16e-01 0.0422 0.0841 0.348 B L1
ENSG00000028839 TBPL1 -633899 sc-eQTL 1.58e-01 0.0923 0.0651 0.348 CD4T L1
ENSG00000079950 STX7 805073 sc-eQTL 5.59e-01 0.0398 0.068 0.348 CD4T L1
ENSG00000112303 VNN2 554812 sc-eQTL 6.70e-01 0.0252 0.0589 0.348 CD4T L1
ENSG00000112306 RPS12 503702 sc-eQTL 8.60e-02 0.0686 0.0398 0.348 CD4T L1
ENSG00000118515 SGK1 -999841 sc-eQTL 6.64e-03 0.145 0.0529 0.348 CD4T L1
ENSG00000146409 SLC18B1 504932 sc-eQTL 9.81e-01 0.00189 0.081 0.348 CD4T L1
ENSG00000028839 TBPL1 -633899 sc-eQTL 9.41e-01 -0.00486 0.0651 0.348 CD8T L1
ENSG00000079950 STX7 805073 sc-eQTL 4.26e-01 -0.0541 0.0679 0.348 CD8T L1
ENSG00000112303 VNN2 554812 sc-eQTL 8.20e-02 -0.138 0.0788 0.348 CD8T L1
ENSG00000112306 RPS12 503702 sc-eQTL 9.36e-01 -0.00218 0.0271 0.348 CD8T L1
ENSG00000118515 SGK1 -999841 sc-eQTL 1.08e-01 0.067 0.0415 0.348 CD8T L1
ENSG00000146409 SLC18B1 504932 sc-eQTL 2.97e-01 -0.0855 0.0818 0.348 CD8T L1
ENSG00000028839 TBPL1 -633899 sc-eQTL 2.27e-01 0.117 0.0963 0.347 DC L1
ENSG00000079950 STX7 805073 sc-eQTL 5.12e-01 -0.0394 0.06 0.347 DC L1
ENSG00000093134 VNN3 583506 sc-eQTL 6.57e-01 -0.0331 0.0744 0.347 DC L1
ENSG00000112299 VNN1 604216 sc-eQTL 6.01e-01 -0.0421 0.0803 0.347 DC L1
ENSG00000112303 VNN2 554812 sc-eQTL 8.00e-01 -0.0218 0.086 0.347 DC L1
ENSG00000112306 RPS12 503702 sc-eQTL 3.56e-01 0.0445 0.0481 0.347 DC L1
ENSG00000118515 SGK1 -999841 sc-eQTL 9.07e-01 -0.00652 0.0559 0.347 DC L1
ENSG00000146409 SLC18B1 504932 sc-eQTL 1.11e-01 0.121 0.0758 0.347 DC L1
ENSG00000286438 AL591115.1 215143 sc-eQTL 1.15e-01 -0.109 0.069 0.347 DC L1
ENSG00000286887 AL355881.1 -978030 sc-eQTL 8.85e-01 0.0125 0.0866 0.347 DC L1
ENSG00000028839 TBPL1 -633899 sc-eQTL 1.74e-01 0.0933 0.0685 0.348 Mono L1
ENSG00000079950 STX7 805073 sc-eQTL 8.00e-01 0.0117 0.046 0.348 Mono L1
ENSG00000093134 VNN3 583506 sc-eQTL 7.32e-01 -0.0271 0.0789 0.348 Mono L1
ENSG00000112299 VNN1 604216 sc-eQTL 2.98e-01 -0.0884 0.0848 0.348 Mono L1
ENSG00000112303 VNN2 554812 sc-eQTL 2.07e-01 -0.0755 0.0597 0.348 Mono L1
ENSG00000112306 RPS12 503702 sc-eQTL 6.20e-01 0.0178 0.0359 0.348 Mono L1
ENSG00000118515 SGK1 -999841 sc-eQTL 7.32e-01 0.0174 0.0507 0.348 Mono L1
ENSG00000146409 SLC18B1 504932 sc-eQTL 9.98e-01 0.000152 0.0711 0.348 Mono L1
ENSG00000286887 AL355881.1 -978030 sc-eQTL 6.14e-01 0.0353 0.0698 0.348 Mono L1
ENSG00000028839 TBPL1 -633899 sc-eQTL 7.34e-01 0.0254 0.0747 0.348 NK L1
ENSG00000079950 STX7 805073 sc-eQTL 2.19e-02 -0.157 0.0682 0.348 NK L1
ENSG00000112303 VNN2 554812 sc-eQTL 5.20e-01 -0.0553 0.0859 0.348 NK L1
ENSG00000112306 RPS12 503702 sc-eQTL 5.76e-01 0.0199 0.0355 0.348 NK L1
ENSG00000118515 SGK1 -999841 sc-eQTL 1.12e-01 0.104 0.0654 0.348 NK L1
ENSG00000028839 TBPL1 -633899 sc-eQTL 7.80e-01 -0.0242 0.0864 0.348 Other_T L1
ENSG00000079950 STX7 805073 sc-eQTL 2.51e-01 -0.078 0.0678 0.348 Other_T L1
ENSG00000112303 VNN2 554812 sc-eQTL 9.86e-01 0.00143 0.0823 0.348 Other_T L1
ENSG00000112306 RPS12 503702 sc-eQTL 3.49e-01 0.0305 0.0325 0.348 Other_T L1
ENSG00000118515 SGK1 -999841 sc-eQTL 5.80e-02 0.113 0.0595 0.348 Other_T L1
ENSG00000146409 SLC18B1 504932 sc-eQTL 8.98e-01 -0.0114 0.0893 0.348 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -633899 sc-eQTL 6.41e-01 -0.0493 0.106 0.355 B_Activated L2
ENSG00000079931 MOXD1 916796 sc-eQTL 3.74e-01 0.0858 0.0963 0.355 B_Activated L2
ENSG00000079950 STX7 805073 sc-eQTL 7.81e-01 -0.0252 0.0905 0.355 B_Activated L2
ENSG00000112303 VNN2 554812 sc-eQTL 3.95e-01 0.0819 0.0962 0.355 B_Activated L2
ENSG00000112306 RPS12 503702 sc-eQTL 6.29e-01 -0.025 0.0516 0.355 B_Activated L2
ENSG00000118515 SGK1 -999841 sc-eQTL 3.72e-01 0.0822 0.0919 0.355 B_Activated L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 9.94e-01 0.00065 0.0904 0.355 B_Activated L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 8.63e-01 0.0167 0.0963 0.348 B_Intermediate L2
ENSG00000079931 MOXD1 916796 sc-eQTL 8.07e-01 0.0207 0.0845 0.348 B_Intermediate L2
ENSG00000079950 STX7 805073 sc-eQTL 1.40e-01 -0.0815 0.055 0.348 B_Intermediate L2
ENSG00000112303 VNN2 554812 sc-eQTL 6.51e-01 0.0377 0.0833 0.348 B_Intermediate L2
ENSG00000112306 RPS12 503702 sc-eQTL 2.92e-01 0.0538 0.0509 0.348 B_Intermediate L2
ENSG00000118515 SGK1 -999841 sc-eQTL 1.74e-03 0.273 0.0862 0.348 B_Intermediate L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 7.51e-01 0.0292 0.0919 0.348 B_Intermediate L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 3.60e-02 -0.195 0.0923 0.347 B_Memory L2
ENSG00000079931 MOXD1 916796 sc-eQTL 9.84e-01 0.00176 0.086 0.347 B_Memory L2
ENSG00000079950 STX7 805073 sc-eQTL 7.21e-01 0.0241 0.0675 0.347 B_Memory L2
ENSG00000112303 VNN2 554812 sc-eQTL 9.24e-01 -0.00846 0.0883 0.347 B_Memory L2
ENSG00000112306 RPS12 503702 sc-eQTL 8.77e-01 -0.00658 0.0425 0.347 B_Memory L2
ENSG00000118515 SGK1 -999841 sc-eQTL 5.46e-02 0.149 0.0773 0.347 B_Memory L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 9.80e-01 -0.00228 0.0887 0.347 B_Memory L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 4.01e-01 -0.0731 0.087 0.348 B_Naive1 L2
ENSG00000079931 MOXD1 916796 sc-eQTL 7.94e-01 0.025 0.0958 0.348 B_Naive1 L2
ENSG00000079950 STX7 805073 sc-eQTL 5.57e-01 -0.0246 0.0418 0.348 B_Naive1 L2
ENSG00000112303 VNN2 554812 sc-eQTL 4.89e-01 0.0562 0.0812 0.348 B_Naive1 L2
ENSG00000112306 RPS12 503702 sc-eQTL 2.45e-01 0.0538 0.0461 0.348 B_Naive1 L2
ENSG00000118515 SGK1 -999841 sc-eQTL 8.51e-02 0.124 0.0719 0.348 B_Naive1 L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 4.66e-01 -0.0651 0.0892 0.348 B_Naive1 L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 4.78e-01 -0.066 0.0928 0.348 B_Naive2 L2
ENSG00000079931 MOXD1 916796 sc-eQTL 4.36e-02 -0.182 0.0897 0.348 B_Naive2 L2
ENSG00000079950 STX7 805073 sc-eQTL 7.35e-01 -0.0168 0.0493 0.348 B_Naive2 L2
ENSG00000112303 VNN2 554812 sc-eQTL 7.86e-01 -0.0247 0.0906 0.348 B_Naive2 L2
ENSG00000112306 RPS12 503702 sc-eQTL 3.38e-01 0.046 0.0479 0.348 B_Naive2 L2
ENSG00000118515 SGK1 -999841 sc-eQTL 4.55e-01 0.0633 0.0847 0.348 B_Naive2 L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 8.54e-01 0.0169 0.0915 0.348 B_Naive2 L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 1.15e-01 0.146 0.0923 0.345 CD4_CTL L2
ENSG00000079950 STX7 805073 sc-eQTL 2.97e-01 0.0963 0.092 0.345 CD4_CTL L2
ENSG00000112303 VNN2 554812 sc-eQTL 1.74e-01 -0.126 0.0926 0.345 CD4_CTL L2
ENSG00000112306 RPS12 503702 sc-eQTL 2.07e-02 0.099 0.0424 0.345 CD4_CTL L2
ENSG00000118515 SGK1 -999841 sc-eQTL 1.41e-01 0.11 0.0742 0.345 CD4_CTL L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 6.37e-01 0.041 0.0867 0.345 CD4_CTL L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 8.71e-01 -0.0122 0.0746 0.348 CD4_Naive L2
ENSG00000079950 STX7 805073 sc-eQTL 4.21e-01 0.0589 0.0731 0.348 CD4_Naive L2
ENSG00000112303 VNN2 554812 sc-eQTL 4.91e-01 0.0467 0.0677 0.348 CD4_Naive L2
ENSG00000112306 RPS12 503702 sc-eQTL 7.71e-03 0.116 0.0432 0.348 CD4_Naive L2
ENSG00000118515 SGK1 -999841 sc-eQTL 6.44e-04 0.181 0.0524 0.348 CD4_Naive L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 9.72e-01 0.00301 0.0846 0.348 CD4_Naive L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 9.31e-01 0.00694 0.0803 0.348 CD4_TCM L2
ENSG00000079950 STX7 805073 sc-eQTL 9.06e-01 0.00954 0.0808 0.348 CD4_TCM L2
ENSG00000112303 VNN2 554812 sc-eQTL 9.60e-01 0.004 0.0797 0.348 CD4_TCM L2
ENSG00000112306 RPS12 503702 sc-eQTL 5.87e-01 0.0224 0.0413 0.348 CD4_TCM L2
ENSG00000118515 SGK1 -999841 sc-eQTL 1.23e-01 0.0889 0.0575 0.348 CD4_TCM L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 6.89e-01 -0.0384 0.0956 0.348 CD4_TCM L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 9.44e-01 -0.00651 0.0919 0.348 CD4_TEM L2
ENSG00000079950 STX7 805073 sc-eQTL 6.36e-02 -0.17 0.0913 0.348 CD4_TEM L2
ENSG00000112303 VNN2 554812 sc-eQTL 3.72e-01 0.0789 0.0882 0.348 CD4_TEM L2
ENSG00000112306 RPS12 503702 sc-eQTL 2.28e-02 0.0821 0.0358 0.348 CD4_TEM L2
ENSG00000118515 SGK1 -999841 sc-eQTL 4.16e-02 0.126 0.0616 0.348 CD4_TEM L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 7.71e-01 -0.0262 0.09 0.348 CD4_TEM L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 3.94e-01 -0.0695 0.0813 0.348 CD8_CTL L2
ENSG00000079950 STX7 805073 sc-eQTL 7.20e-01 -0.0273 0.0761 0.348 CD8_CTL L2
ENSG00000112303 VNN2 554812 sc-eQTL 1.21e-01 -0.134 0.086 0.348 CD8_CTL L2
ENSG00000112306 RPS12 503702 sc-eQTL 3.37e-01 0.0444 0.0462 0.348 CD8_CTL L2
ENSG00000118515 SGK1 -999841 sc-eQTL 8.28e-02 0.135 0.0776 0.348 CD8_CTL L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 4.19e-01 -0.0726 0.0896 0.348 CD8_CTL L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 5.04e-01 0.0576 0.086 0.348 CD8_Naive L2
ENSG00000079950 STX7 805073 sc-eQTL 4.94e-01 -0.0628 0.0917 0.348 CD8_Naive L2
ENSG00000112303 VNN2 554812 sc-eQTL 5.08e-01 -0.0524 0.0791 0.348 CD8_Naive L2
ENSG00000112306 RPS12 503702 sc-eQTL 1.76e-01 0.0612 0.0451 0.348 CD8_Naive L2
ENSG00000118515 SGK1 -999841 sc-eQTL 3.64e-03 0.164 0.0558 0.348 CD8_Naive L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 4.18e-01 -0.0737 0.0908 0.348 CD8_Naive L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 8.49e-01 0.0185 0.0968 0.336 CD8_TCM L2
ENSG00000079950 STX7 805073 sc-eQTL 8.68e-01 0.0149 0.0896 0.336 CD8_TCM L2
ENSG00000112303 VNN2 554812 sc-eQTL 5.62e-01 -0.0517 0.0889 0.336 CD8_TCM L2
ENSG00000112306 RPS12 503702 sc-eQTL 3.51e-02 0.091 0.0429 0.336 CD8_TCM L2
ENSG00000118515 SGK1 -999841 sc-eQTL 8.37e-02 0.124 0.0713 0.336 CD8_TCM L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 9.93e-01 -0.000818 0.095 0.336 CD8_TCM L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 2.57e-01 0.0983 0.0865 0.354 CD8_TEM L2
ENSG00000079950 STX7 805073 sc-eQTL 8.59e-01 0.0169 0.0947 0.354 CD8_TEM L2
ENSG00000112303 VNN2 554812 sc-eQTL 4.62e-01 -0.0693 0.094 0.354 CD8_TEM L2
ENSG00000112306 RPS12 503702 sc-eQTL 3.55e-01 0.0468 0.0505 0.354 CD8_TEM L2
ENSG00000118515 SGK1 -999841 sc-eQTL 1.59e-01 -0.117 0.0826 0.354 CD8_TEM L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 8.52e-01 -0.0179 0.0957 0.354 CD8_TEM L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 6.21e-01 0.0447 0.0903 0.348 MAIT L2
ENSG00000079950 STX7 805073 sc-eQTL 7.66e-01 -0.0256 0.0858 0.348 MAIT L2
ENSG00000112303 VNN2 554812 sc-eQTL 7.81e-01 -0.0243 0.0873 0.348 MAIT L2
ENSG00000112306 RPS12 503702 sc-eQTL 1.56e-01 0.0609 0.0427 0.348 MAIT L2
ENSG00000118515 SGK1 -999841 sc-eQTL 3.88e-01 0.0522 0.0603 0.348 MAIT L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 9.98e-01 -0.000223 0.09 0.348 MAIT L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 2.73e-01 0.107 0.0973 0.349 NK_CD56bright L2
ENSG00000079950 STX7 805073 sc-eQTL 9.59e-01 -0.00468 0.0905 0.349 NK_CD56bright L2
ENSG00000112303 VNN2 554812 sc-eQTL 3.75e-01 0.0815 0.0917 0.349 NK_CD56bright L2
ENSG00000112306 RPS12 503702 sc-eQTL 4.65e-01 -0.0375 0.0511 0.349 NK_CD56bright L2
ENSG00000118515 SGK1 -999841 sc-eQTL 1.02e-01 0.125 0.076 0.349 NK_CD56bright L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 5.32e-01 0.0502 0.0802 0.347 NK_CD56dim L2
ENSG00000079950 STX7 805073 sc-eQTL 6.67e-02 -0.134 0.0729 0.347 NK_CD56dim L2
ENSG00000112303 VNN2 554812 sc-eQTL 5.91e-01 -0.0494 0.0919 0.347 NK_CD56dim L2
ENSG00000112306 RPS12 503702 sc-eQTL 6.51e-01 0.0165 0.0365 0.347 NK_CD56dim L2
ENSG00000118515 SGK1 -999841 sc-eQTL 6.30e-01 0.039 0.0808 0.347 NK_CD56dim L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 4.05e-01 -0.0827 0.0991 0.358 NK_HLA L2
ENSG00000079950 STX7 805073 sc-eQTL 2.53e-01 -0.103 0.0901 0.358 NK_HLA L2
ENSG00000112303 VNN2 554812 sc-eQTL 5.40e-01 -0.0562 0.0914 0.358 NK_HLA L2
ENSG00000112306 RPS12 503702 sc-eQTL 6.89e-01 -0.0171 0.0426 0.358 NK_HLA L2
ENSG00000118515 SGK1 -999841 sc-eQTL 7.55e-01 -0.0263 0.0842 0.358 NK_HLA L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 6.20e-01 0.0405 0.0817 0.347 NK_cytokine L2
ENSG00000079950 STX7 805073 sc-eQTL 3.35e-01 -0.0763 0.079 0.347 NK_cytokine L2
ENSG00000112303 VNN2 554812 sc-eQTL 7.87e-01 -0.0241 0.089 0.347 NK_cytokine L2
ENSG00000112306 RPS12 503702 sc-eQTL 8.23e-01 -0.0108 0.0483 0.347 NK_cytokine L2
ENSG00000118515 SGK1 -999841 sc-eQTL 2.19e-01 0.0986 0.0801 0.347 NK_cytokine L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 2.49e-01 0.135 0.117 0.37 PB L2
ENSG00000079931 MOXD1 916796 sc-eQTL 4.70e-01 -0.0727 0.1 0.37 PB L2
ENSG00000079950 STX7 805073 sc-eQTL 6.41e-01 -0.0392 0.0837 0.37 PB L2
ENSG00000112303 VNN2 554812 sc-eQTL 1.81e-01 -0.137 0.102 0.37 PB L2
ENSG00000112306 RPS12 503702 sc-eQTL 8.83e-01 0.00861 0.0581 0.37 PB L2
ENSG00000118515 SGK1 -999841 sc-eQTL 3.97e-01 0.0796 0.0936 0.37 PB L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 7.78e-01 -0.0308 0.109 0.37 PB L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 2.97e-01 0.0963 0.0921 0.35 Pro_T L2
ENSG00000079950 STX7 805073 sc-eQTL 7.40e-01 -0.0274 0.0824 0.35 Pro_T L2
ENSG00000112303 VNN2 554812 sc-eQTL 8.08e-01 -0.0216 0.0884 0.35 Pro_T L2
ENSG00000112306 RPS12 503702 sc-eQTL 3.61e-01 0.0306 0.0334 0.35 Pro_T L2
ENSG00000118515 SGK1 -999841 sc-eQTL 1.32e-01 0.101 0.0667 0.35 Pro_T L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 3.65e-01 0.0785 0.0864 0.35 Pro_T L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 7.23e-01 0.0333 0.0939 0.348 Treg L2
ENSG00000079950 STX7 805073 sc-eQTL 1.29e-01 0.134 0.088 0.348 Treg L2
ENSG00000112303 VNN2 554812 sc-eQTL 6.86e-01 -0.0301 0.0745 0.348 Treg L2
ENSG00000112306 RPS12 503702 sc-eQTL 9.39e-01 0.00253 0.0329 0.348 Treg L2
ENSG00000118515 SGK1 -999841 sc-eQTL 3.08e-01 0.0707 0.0692 0.348 Treg L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 1.65e-02 0.222 0.0918 0.348 Treg L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 3.83e-01 0.0853 0.0976 0.349 cDC L2
ENSG00000079950 STX7 805073 sc-eQTL 4.92e-01 -0.0528 0.0767 0.349 cDC L2
ENSG00000093134 VNN3 583506 sc-eQTL 5.10e-01 -0.0503 0.0761 0.349 cDC L2
ENSG00000112299 VNN1 604216 sc-eQTL 7.76e-01 -0.0256 0.0896 0.349 cDC L2
ENSG00000112303 VNN2 554812 sc-eQTL 2.26e-01 -0.106 0.087 0.349 cDC L2
ENSG00000112306 RPS12 503702 sc-eQTL 7.34e-01 -0.0146 0.0431 0.349 cDC L2
ENSG00000118515 SGK1 -999841 sc-eQTL 7.07e-01 0.0273 0.0726 0.349 cDC L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 2.50e-01 0.0982 0.0851 0.349 cDC L2
ENSG00000286438 AL591115.1 215143 sc-eQTL 1.34e-02 -0.168 0.0671 0.349 cDC L2
ENSG00000286887 AL355881.1 -978030 sc-eQTL 4.01e-01 0.0705 0.0838 0.349 cDC L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 9.97e-01 -0.000271 0.0784 0.348 cMono_IL1B L2
ENSG00000079950 STX7 805073 sc-eQTL 9.09e-01 -0.00678 0.0595 0.348 cMono_IL1B L2
ENSG00000093134 VNN3 583506 sc-eQTL 6.25e-01 -0.0411 0.0841 0.348 cMono_IL1B L2
ENSG00000112299 VNN1 604216 sc-eQTL 1.14e-01 -0.134 0.0844 0.348 cMono_IL1B L2
ENSG00000112303 VNN2 554812 sc-eQTL 3.89e-01 -0.0585 0.0678 0.348 cMono_IL1B L2
ENSG00000112306 RPS12 503702 sc-eQTL 6.56e-01 0.0168 0.0377 0.348 cMono_IL1B L2
ENSG00000118515 SGK1 -999841 sc-eQTL 9.98e-01 -0.000138 0.0562 0.348 cMono_IL1B L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 9.50e-01 -0.00453 0.0727 0.348 cMono_IL1B L2
ENSG00000286887 AL355881.1 -978030 sc-eQTL 3.68e-01 0.0682 0.0756 0.348 cMono_IL1B L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 3.03e-01 0.0927 0.0898 0.348 cMono_S100A L2
ENSG00000079950 STX7 805073 sc-eQTL 9.13e-01 0.00712 0.065 0.348 cMono_S100A L2
ENSG00000093134 VNN3 583506 sc-eQTL 8.27e-01 0.0177 0.0812 0.348 cMono_S100A L2
ENSG00000112299 VNN1 604216 sc-eQTL 7.36e-01 -0.0298 0.0882 0.348 cMono_S100A L2
ENSG00000112303 VNN2 554812 sc-eQTL 2.78e-01 -0.0626 0.0576 0.348 cMono_S100A L2
ENSG00000112306 RPS12 503702 sc-eQTL 4.51e-01 0.0314 0.0415 0.348 cMono_S100A L2
ENSG00000118515 SGK1 -999841 sc-eQTL 3.89e-01 0.041 0.0475 0.348 cMono_S100A L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 8.06e-01 -0.019 0.077 0.348 cMono_S100A L2
ENSG00000286887 AL355881.1 -978030 sc-eQTL 2.77e-01 -0.0818 0.0751 0.348 cMono_S100A L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 3.83e-01 -0.0968 0.111 0.352 gdT L2
ENSG00000079950 STX7 805073 sc-eQTL 1.51e-01 -0.137 0.0948 0.352 gdT L2
ENSG00000112303 VNN2 554812 sc-eQTL 7.98e-01 0.0271 0.106 0.352 gdT L2
ENSG00000112306 RPS12 503702 sc-eQTL 3.96e-01 0.0341 0.0401 0.352 gdT L2
ENSG00000118515 SGK1 -999841 sc-eQTL 1.26e-01 0.116 0.0753 0.352 gdT L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 4.83e-01 -0.073 0.104 0.352 gdT L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 7.79e-01 -0.0256 0.0912 0.34 intMono L2
ENSG00000079950 STX7 805073 sc-eQTL 7.85e-01 -0.0238 0.0871 0.34 intMono L2
ENSG00000093134 VNN3 583506 sc-eQTL 3.35e-01 -0.0847 0.0877 0.34 intMono L2
ENSG00000112299 VNN1 604216 sc-eQTL 6.79e-01 0.0361 0.0869 0.34 intMono L2
ENSG00000112303 VNN2 554812 sc-eQTL 7.69e-01 0.026 0.0883 0.34 intMono L2
ENSG00000112306 RPS12 503702 sc-eQTL 9.76e-01 -0.00114 0.0385 0.34 intMono L2
ENSG00000118515 SGK1 -999841 sc-eQTL 4.64e-01 0.0473 0.0645 0.34 intMono L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 8.77e-01 0.0144 0.0936 0.34 intMono L2
ENSG00000286887 AL355881.1 -978030 sc-eQTL 8.50e-01 0.0169 0.0895 0.34 intMono L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 2.84e-01 0.0995 0.0926 0.351 ncMono L2
ENSG00000079950 STX7 805073 sc-eQTL 4.16e-01 -0.0511 0.0627 0.351 ncMono L2
ENSG00000093134 VNN3 583506 sc-eQTL 9.29e-02 -0.149 0.088 0.351 ncMono L2
ENSG00000112299 VNN1 604216 sc-eQTL 7.78e-02 -0.155 0.0873 0.351 ncMono L2
ENSG00000112303 VNN2 554812 sc-eQTL 7.43e-01 -0.0278 0.0846 0.351 ncMono L2
ENSG00000112306 RPS12 503702 sc-eQTL 4.09e-01 -0.035 0.0423 0.351 ncMono L2
ENSG00000118515 SGK1 -999841 sc-eQTL 9.86e-01 -0.00108 0.06 0.351 ncMono L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 4.46e-01 -0.0572 0.0748 0.351 ncMono L2
ENSG00000286887 AL355881.1 -978030 sc-eQTL 3.31e-01 0.077 0.079 0.351 ncMono L2
ENSG00000028839 TBPL1 -633899 sc-eQTL 2.08e-01 0.139 0.11 0.35 pDC L2
ENSG00000079950 STX7 805073 sc-eQTL 3.00e-02 -0.158 0.0723 0.35 pDC L2
ENSG00000093134 VNN3 583506 sc-eQTL 1.90e-01 0.0967 0.0735 0.35 pDC L2
ENSG00000112299 VNN1 604216 sc-eQTL 7.60e-01 -0.0231 0.0752 0.35 pDC L2
ENSG00000112303 VNN2 554812 sc-eQTL 7.50e-01 0.0286 0.0895 0.35 pDC L2
ENSG00000112306 RPS12 503702 sc-eQTL 9.52e-01 0.00373 0.0617 0.35 pDC L2
ENSG00000118515 SGK1 -999841 sc-eQTL 8.88e-01 -0.00884 0.0627 0.35 pDC L2
ENSG00000146409 SLC18B1 504932 sc-eQTL 2.74e-01 0.1 0.091 0.35 pDC L2
ENSG00000286438 AL591115.1 215143 sc-eQTL 3.62e-01 -0.0797 0.0871 0.35 pDC L2
ENSG00000286887 AL355881.1 -978030 sc-eQTL 2.48e-01 -0.0894 0.0772 0.35 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -633899 sc-eQTL 6.64e-01 -0.0405 0.0932 0.348 B_Memory LOneK1K
ENSG00000079931 MOXD1 916796 sc-eQTL 6.00e-01 0.0475 0.0905 0.348 B_Memory LOneK1K
ENSG00000079950 STX7 805073 sc-eQTL 5.60e-01 -0.0299 0.0513 0.348 B_Memory LOneK1K
ENSG00000112303 VNN2 554812 sc-eQTL 9.02e-01 0.00997 0.0812 0.348 B_Memory LOneK1K
ENSG00000112306 RPS12 503702 sc-eQTL 4.42e-01 0.0356 0.0462 0.348 B_Memory LOneK1K
ENSG00000118515 SGK1 -999841 sc-eQTL 2.93e-03 0.213 0.0708 0.348 B_Memory LOneK1K
ENSG00000146409 SLC18B1 504932 sc-eQTL 8.68e-01 -0.0142 0.0849 0.348 B_Memory LOneK1K
ENSG00000028839 TBPL1 -633899 sc-eQTL 3.93e-01 -0.0749 0.0875 0.348 B_Naive LOneK1K
ENSG00000079931 MOXD1 916796 sc-eQTL 3.66e-01 -0.0869 0.096 0.348 B_Naive LOneK1K
ENSG00000079950 STX7 805073 sc-eQTL 9.74e-01 -0.00128 0.0395 0.348 B_Naive LOneK1K
ENSG00000112303 VNN2 554812 sc-eQTL 9.44e-01 0.00539 0.0767 0.348 B_Naive LOneK1K
ENSG00000112306 RPS12 503702 sc-eQTL 2.23e-01 0.0565 0.0462 0.348 B_Naive LOneK1K
ENSG00000118515 SGK1 -999841 sc-eQTL 1.05e-01 0.116 0.0714 0.348 B_Naive LOneK1K
ENSG00000146409 SLC18B1 504932 sc-eQTL 9.93e-01 0.000721 0.0875 0.348 B_Naive LOneK1K
ENSG00000028839 TBPL1 -633899 sc-eQTL 2.79e-01 0.0773 0.0712 0.348 CD14_Mono LOneK1K
ENSG00000079950 STX7 805073 sc-eQTL 7.90e-01 0.0133 0.0497 0.348 CD14_Mono LOneK1K
ENSG00000093134 VNN3 583506 sc-eQTL 9.46e-01 -0.00548 0.0809 0.348 CD14_Mono LOneK1K
ENSG00000112299 VNN1 604216 sc-eQTL 4.02e-01 -0.0708 0.0843 0.348 CD14_Mono LOneK1K
ENSG00000112303 VNN2 554812 sc-eQTL 4.59e-01 -0.0414 0.0558 0.348 CD14_Mono LOneK1K
ENSG00000112306 RPS12 503702 sc-eQTL 6.81e-01 0.0158 0.0383 0.348 CD14_Mono LOneK1K
ENSG00000118515 SGK1 -999841 sc-eQTL 8.42e-01 0.0104 0.0522 0.348 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 504932 sc-eQTL 9.79e-01 -0.00176 0.0681 0.348 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -978030 sc-eQTL 9.68e-01 0.00287 0.0714 0.348 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -633899 sc-eQTL 7.78e-01 0.0258 0.0913 0.347 CD16_Mono LOneK1K
ENSG00000079950 STX7 805073 sc-eQTL 8.52e-01 -0.0113 0.0602 0.347 CD16_Mono LOneK1K
ENSG00000093134 VNN3 583506 sc-eQTL 1.54e-02 -0.213 0.0874 0.347 CD16_Mono LOneK1K
ENSG00000112299 VNN1 604216 sc-eQTL 5.14e-02 -0.17 0.087 0.347 CD16_Mono LOneK1K
ENSG00000112303 VNN2 554812 sc-eQTL 6.32e-01 -0.0396 0.0827 0.347 CD16_Mono LOneK1K
ENSG00000112306 RPS12 503702 sc-eQTL 9.20e-01 -0.00353 0.0351 0.347 CD16_Mono LOneK1K
ENSG00000118515 SGK1 -999841 sc-eQTL 6.56e-01 0.0237 0.0531 0.347 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 504932 sc-eQTL 5.37e-01 0.0527 0.0852 0.347 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -978030 sc-eQTL 1.55e-01 0.11 0.0767 0.347 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -633899 sc-eQTL 5.04e-01 0.0493 0.0737 0.347 NK_CD56dim LOneK1K
ENSG00000079950 STX7 805073 sc-eQTL 1.37e-02 -0.17 0.0683 0.347 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 554812 sc-eQTL 3.20e-01 -0.0872 0.0875 0.347 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 503702 sc-eQTL 7.33e-01 0.0122 0.0358 0.347 NK_CD56dim LOneK1K
ENSG00000118515 SGK1 -999841 sc-eQTL 1.51e-01 0.106 0.0736 0.347 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 604216 pQTL 0.00162 -0.112 0.0356 0.0 0.0 0.37

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina