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Genes within 1Mb (chr6:133316675:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -635495 sc-eQTL 5.00e-01 -0.0598 0.0885 0.344 B L1
ENSG00000079931 MOXD1 915200 sc-eQTL 7.84e-01 -0.0257 0.0935 0.344 B L1
ENSG00000079950 STX7 803477 sc-eQTL 6.18e-01 -0.0176 0.0353 0.344 B L1
ENSG00000112303 VNN2 553216 sc-eQTL 4.26e-01 0.0529 0.0662 0.344 B L1
ENSG00000112306 RPS12 502106 sc-eQTL 9.62e-01 0.00193 0.0401 0.344 B L1
ENSG00000146409 SLC18B1 503336 sc-eQTL 6.92e-01 0.0335 0.0844 0.344 B L1
ENSG00000028839 TBPL1 -635495 sc-eQTL 1.75e-01 0.0889 0.0653 0.344 CD4T L1
ENSG00000079950 STX7 803477 sc-eQTL 6.05e-01 0.0354 0.0682 0.344 CD4T L1
ENSG00000112303 VNN2 553216 sc-eQTL 5.73e-01 0.0333 0.059 0.344 CD4T L1
ENSG00000112306 RPS12 502106 sc-eQTL 5.52e-02 0.0768 0.0398 0.344 CD4T L1
ENSG00000146409 SLC18B1 503336 sc-eQTL 9.46e-01 -0.00556 0.0813 0.344 CD4T L1
ENSG00000028839 TBPL1 -635495 sc-eQTL 9.97e-01 -0.000248 0.0654 0.344 CD8T L1
ENSG00000079950 STX7 803477 sc-eQTL 4.87e-01 -0.0475 0.0682 0.344 CD8T L1
ENSG00000112303 VNN2 553216 sc-eQTL 6.64e-02 -0.146 0.0791 0.344 CD8T L1
ENSG00000112306 RPS12 502106 sc-eQTL 9.75e-01 -0.000847 0.0272 0.344 CD8T L1
ENSG00000146409 SLC18B1 503336 sc-eQTL 2.96e-01 -0.0861 0.0822 0.344 CD8T L1
ENSG00000028839 TBPL1 -635495 sc-eQTL 1.39e-01 0.144 0.0967 0.342 DC L1
ENSG00000079950 STX7 803477 sc-eQTL 5.24e-01 -0.0386 0.0604 0.342 DC L1
ENSG00000093134 VNN3 581910 sc-eQTL 6.63e-01 -0.0326 0.0749 0.342 DC L1
ENSG00000112299 VNN1 602620 sc-eQTL 4.91e-01 -0.0558 0.0808 0.342 DC L1
ENSG00000112303 VNN2 553216 sc-eQTL 8.95e-01 -0.0114 0.0866 0.342 DC L1
ENSG00000112306 RPS12 502106 sc-eQTL 3.48e-01 0.0455 0.0484 0.342 DC L1
ENSG00000146409 SLC18B1 503336 sc-eQTL 1.17e-01 0.12 0.0763 0.342 DC L1
ENSG00000286438 AL591115.1 213547 sc-eQTL 1.47e-01 -0.101 0.0695 0.342 DC L1
ENSG00000286887 AL355881.1 -979626 sc-eQTL 8.97e-01 0.0113 0.0871 0.342 DC L1
ENSG00000028839 TBPL1 -635495 sc-eQTL 2.09e-01 0.0867 0.0689 0.344 Mono L1
ENSG00000079950 STX7 803477 sc-eQTL 8.72e-01 0.00749 0.0463 0.344 Mono L1
ENSG00000093134 VNN3 581910 sc-eQTL 5.92e-01 -0.0426 0.0794 0.344 Mono L1
ENSG00000112299 VNN1 602620 sc-eQTL 2.79e-01 -0.0924 0.0852 0.344 Mono L1
ENSG00000112303 VNN2 553216 sc-eQTL 3.00e-01 -0.0625 0.0601 0.344 Mono L1
ENSG00000112306 RPS12 502106 sc-eQTL 5.92e-01 0.0194 0.0361 0.344 Mono L1
ENSG00000146409 SLC18B1 503336 sc-eQTL 9.57e-01 0.00386 0.0715 0.344 Mono L1
ENSG00000286887 AL355881.1 -979626 sc-eQTL 7.50e-01 0.0225 0.0702 0.344 Mono L1
ENSG00000028839 TBPL1 -635495 sc-eQTL 8.00e-01 0.019 0.075 0.343 NK L1
ENSG00000079950 STX7 803477 sc-eQTL 2.55e-02 -0.154 0.0685 0.343 NK L1
ENSG00000112303 VNN2 553216 sc-eQTL 6.35e-01 -0.0411 0.0863 0.343 NK L1
ENSG00000112306 RPS12 502106 sc-eQTL 4.28e-01 0.0283 0.0357 0.343 NK L1
ENSG00000028839 TBPL1 -635495 sc-eQTL 7.70e-01 -0.0254 0.0868 0.344 Other_T L1
ENSG00000079950 STX7 803477 sc-eQTL 2.22e-01 -0.0834 0.0681 0.344 Other_T L1
ENSG00000112303 VNN2 553216 sc-eQTL 9.67e-01 -0.0034 0.0827 0.344 Other_T L1
ENSG00000112306 RPS12 502106 sc-eQTL 2.90e-01 0.0346 0.0327 0.344 Other_T L1
ENSG00000146409 SLC18B1 503336 sc-eQTL 8.71e-01 -0.0146 0.0897 0.344 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -635495 sc-eQTL 6.37e-01 -0.0496 0.105 0.352 B_Activated L2
ENSG00000079931 MOXD1 915200 sc-eQTL 3.86e-01 0.0831 0.0957 0.352 B_Activated L2
ENSG00000079950 STX7 803477 sc-eQTL 8.02e-01 -0.0226 0.0899 0.352 B_Activated L2
ENSG00000112303 VNN2 553216 sc-eQTL 3.41e-01 0.0912 0.0955 0.352 B_Activated L2
ENSG00000112306 RPS12 502106 sc-eQTL 7.54e-01 -0.0161 0.0513 0.352 B_Activated L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 9.34e-01 -0.00744 0.0899 0.352 B_Activated L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 6.92e-01 0.0383 0.0966 0.343 B_Intermediate L2
ENSG00000079931 MOXD1 915200 sc-eQTL 9.41e-01 0.00633 0.0849 0.343 B_Intermediate L2
ENSG00000079950 STX7 803477 sc-eQTL 9.61e-02 -0.0922 0.0552 0.343 B_Intermediate L2
ENSG00000112303 VNN2 553216 sc-eQTL 5.94e-01 0.0446 0.0836 0.343 B_Intermediate L2
ENSG00000112306 RPS12 502106 sc-eQTL 2.75e-01 0.0559 0.0511 0.343 B_Intermediate L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 6.13e-01 0.0467 0.0922 0.343 B_Intermediate L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 4.41e-02 -0.188 0.0926 0.343 B_Memory L2
ENSG00000079931 MOXD1 915200 sc-eQTL 9.32e-01 -0.00738 0.0863 0.343 B_Memory L2
ENSG00000079950 STX7 803477 sc-eQTL 9.57e-01 -0.00368 0.0677 0.343 B_Memory L2
ENSG00000112303 VNN2 553216 sc-eQTL 8.03e-01 0.0221 0.0885 0.343 B_Memory L2
ENSG00000112306 RPS12 502106 sc-eQTL 9.38e-01 0.00332 0.0427 0.343 B_Memory L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 8.78e-01 -0.0136 0.089 0.343 B_Memory L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 5.51e-01 -0.0523 0.0874 0.344 B_Naive1 L2
ENSG00000079931 MOXD1 915200 sc-eQTL 7.16e-01 0.035 0.0962 0.344 B_Naive1 L2
ENSG00000079950 STX7 803477 sc-eQTL 6.28e-01 -0.0204 0.042 0.344 B_Naive1 L2
ENSG00000112303 VNN2 553216 sc-eQTL 4.40e-01 0.063 0.0816 0.344 B_Naive1 L2
ENSG00000112306 RPS12 502106 sc-eQTL 2.37e-01 0.055 0.0464 0.344 B_Naive1 L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 4.24e-01 -0.0718 0.0896 0.344 B_Naive1 L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 4.09e-01 -0.0771 0.0932 0.343 B_Naive2 L2
ENSG00000079931 MOXD1 915200 sc-eQTL 5.14e-02 -0.177 0.0902 0.343 B_Naive2 L2
ENSG00000079950 STX7 803477 sc-eQTL 5.31e-01 -0.0311 0.0495 0.343 B_Naive2 L2
ENSG00000112303 VNN2 553216 sc-eQTL 8.30e-01 -0.0195 0.091 0.343 B_Naive2 L2
ENSG00000112306 RPS12 502106 sc-eQTL 3.47e-01 0.0453 0.0481 0.343 B_Naive2 L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 8.93e-01 0.0124 0.0919 0.343 B_Naive2 L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 9.28e-02 0.157 0.0928 0.341 CD4_CTL L2
ENSG00000079950 STX7 803477 sc-eQTL 3.56e-01 0.0857 0.0926 0.341 CD4_CTL L2
ENSG00000112303 VNN2 553216 sc-eQTL 2.00e-01 -0.12 0.0932 0.341 CD4_CTL L2
ENSG00000112306 RPS12 502106 sc-eQTL 1.41e-02 0.106 0.0426 0.341 CD4_CTL L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 5.21e-01 0.056 0.0871 0.341 CD4_CTL L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 9.08e-01 -0.00863 0.0749 0.344 CD4_Naive L2
ENSG00000079950 STX7 803477 sc-eQTL 3.86e-01 0.0637 0.0733 0.344 CD4_Naive L2
ENSG00000112303 VNN2 553216 sc-eQTL 4.02e-01 0.0571 0.0679 0.344 CD4_Naive L2
ENSG00000112306 RPS12 502106 sc-eQTL 4.85e-03 0.123 0.0433 0.344 CD4_Naive L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 9.01e-01 -0.0106 0.085 0.344 CD4_Naive L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 9.46e-01 -0.00543 0.0805 0.344 CD4_TCM L2
ENSG00000079950 STX7 803477 sc-eQTL 9.91e-01 -0.000867 0.0811 0.344 CD4_TCM L2
ENSG00000112303 VNN2 553216 sc-eQTL 9.40e-01 0.00603 0.0799 0.344 CD4_TCM L2
ENSG00000112306 RPS12 502106 sc-eQTL 4.18e-01 0.0336 0.0414 0.344 CD4_TCM L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 7.80e-01 -0.0268 0.0959 0.344 CD4_TCM L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 9.17e-01 -0.00967 0.0924 0.344 CD4_TEM L2
ENSG00000079950 STX7 803477 sc-eQTL 7.11e-02 -0.166 0.0918 0.344 CD4_TEM L2
ENSG00000112303 VNN2 553216 sc-eQTL 2.80e-01 0.0958 0.0885 0.344 CD4_TEM L2
ENSG00000112306 RPS12 502106 sc-eQTL 1.59e-02 0.0872 0.0359 0.344 CD4_TEM L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 7.49e-01 -0.0289 0.0905 0.344 CD4_TEM L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 4.57e-01 -0.061 0.0818 0.344 CD8_CTL L2
ENSG00000079950 STX7 803477 sc-eQTL 7.82e-01 -0.0212 0.0766 0.344 CD8_CTL L2
ENSG00000112303 VNN2 553216 sc-eQTL 1.65e-01 -0.121 0.0866 0.344 CD8_CTL L2
ENSG00000112306 RPS12 502106 sc-eQTL 2.83e-01 0.05 0.0464 0.344 CD8_CTL L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 4.66e-01 -0.0658 0.0901 0.344 CD8_CTL L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 4.35e-01 0.0675 0.0864 0.344 CD8_Naive L2
ENSG00000079950 STX7 803477 sc-eQTL 5.17e-01 -0.0597 0.0921 0.344 CD8_Naive L2
ENSG00000112303 VNN2 553216 sc-eQTL 3.54e-01 -0.0737 0.0794 0.344 CD8_Naive L2
ENSG00000112306 RPS12 502106 sc-eQTL 1.62e-01 0.0635 0.0453 0.344 CD8_Naive L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 4.72e-01 -0.0658 0.0913 0.344 CD8_Naive L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 7.23e-01 0.0346 0.0974 0.331 CD8_TCM L2
ENSG00000079950 STX7 803477 sc-eQTL 8.37e-01 0.0185 0.0902 0.331 CD8_TCM L2
ENSG00000112303 VNN2 553216 sc-eQTL 4.60e-01 -0.0662 0.0894 0.331 CD8_TCM L2
ENSG00000112306 RPS12 502106 sc-eQTL 3.57e-02 0.0912 0.0431 0.331 CD8_TCM L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 9.46e-01 -0.00652 0.0956 0.331 CD8_TCM L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 2.77e-01 0.0947 0.0869 0.349 CD8_TEM L2
ENSG00000079950 STX7 803477 sc-eQTL 8.46e-01 0.0185 0.0952 0.349 CD8_TEM L2
ENSG00000112303 VNN2 553216 sc-eQTL 5.28e-01 -0.0597 0.0945 0.349 CD8_TEM L2
ENSG00000112306 RPS12 502106 sc-eQTL 2.81e-01 0.0548 0.0507 0.349 CD8_TEM L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 7.90e-01 -0.0256 0.0962 0.349 CD8_TEM L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 5.90e-01 0.0489 0.0907 0.344 MAIT L2
ENSG00000079950 STX7 803477 sc-eQTL 8.47e-01 -0.0167 0.0862 0.344 MAIT L2
ENSG00000112303 VNN2 553216 sc-eQTL 7.38e-01 -0.0294 0.0877 0.344 MAIT L2
ENSG00000112306 RPS12 502106 sc-eQTL 9.92e-02 0.071 0.0429 0.344 MAIT L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 9.80e-01 -0.00226 0.0905 0.344 MAIT L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 4.03e-01 0.0819 0.0978 0.344 NK_CD56bright L2
ENSG00000079950 STX7 803477 sc-eQTL 8.99e-01 -0.0116 0.0908 0.344 NK_CD56bright L2
ENSG00000112303 VNN2 553216 sc-eQTL 3.64e-01 0.0838 0.092 0.344 NK_CD56bright L2
ENSG00000112306 RPS12 502106 sc-eQTL 6.13e-01 -0.026 0.0513 0.344 NK_CD56bright L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 5.18e-01 0.0522 0.0806 0.343 NK_CD56dim L2
ENSG00000079950 STX7 803477 sc-eQTL 8.63e-02 -0.126 0.0734 0.343 NK_CD56dim L2
ENSG00000112303 VNN2 553216 sc-eQTL 7.46e-01 -0.03 0.0924 0.343 NK_CD56dim L2
ENSG00000112306 RPS12 502106 sc-eQTL 4.32e-01 0.0288 0.0366 0.343 NK_CD56dim L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 4.19e-01 -0.0808 0.0999 0.354 NK_HLA L2
ENSG00000079950 STX7 803477 sc-eQTL 1.96e-01 -0.118 0.0907 0.354 NK_HLA L2
ENSG00000112303 VNN2 553216 sc-eQTL 6.87e-01 -0.0372 0.0921 0.354 NK_HLA L2
ENSG00000112306 RPS12 502106 sc-eQTL 8.42e-01 -0.00859 0.0429 0.354 NK_HLA L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 7.61e-01 0.0251 0.0822 0.343 NK_cytokine L2
ENSG00000079950 STX7 803477 sc-eQTL 3.56e-01 -0.0735 0.0795 0.343 NK_cytokine L2
ENSG00000112303 VNN2 553216 sc-eQTL 8.21e-01 -0.0203 0.0895 0.343 NK_cytokine L2
ENSG00000112306 RPS12 502106 sc-eQTL 9.52e-01 0.00292 0.0486 0.343 NK_cytokine L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 2.90e-01 0.125 0.118 0.363 PB L2
ENSG00000079931 MOXD1 915200 sc-eQTL 2.56e-01 -0.114 0.1 0.363 PB L2
ENSG00000079950 STX7 803477 sc-eQTL 4.63e-01 -0.0618 0.084 0.363 PB L2
ENSG00000112303 VNN2 553216 sc-eQTL 2.02e-01 -0.131 0.102 0.363 PB L2
ENSG00000112306 RPS12 502106 sc-eQTL 5.46e-01 0.0353 0.0583 0.363 PB L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 4.68e-01 -0.0796 0.109 0.363 PB L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 3.19e-01 0.0925 0.0926 0.346 Pro_T L2
ENSG00000079950 STX7 803477 sc-eQTL 6.51e-01 -0.0375 0.0829 0.346 Pro_T L2
ENSG00000112303 VNN2 553216 sc-eQTL 9.71e-01 0.00326 0.0889 0.346 Pro_T L2
ENSG00000112306 RPS12 502106 sc-eQTL 3.04e-01 0.0346 0.0336 0.346 Pro_T L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 3.62e-01 0.0794 0.0869 0.346 Pro_T L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 6.48e-01 0.0432 0.0943 0.344 Treg L2
ENSG00000079950 STX7 803477 sc-eQTL 1.53e-01 0.127 0.0885 0.344 Treg L2
ENSG00000112303 VNN2 553216 sc-eQTL 6.71e-01 -0.0318 0.0748 0.344 Treg L2
ENSG00000112306 RPS12 502106 sc-eQTL 8.28e-01 0.00719 0.0331 0.344 Treg L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 1.34e-02 0.23 0.0921 0.344 Treg L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 3.53e-01 0.0914 0.0981 0.344 cDC L2
ENSG00000079950 STX7 803477 sc-eQTL 4.47e-01 -0.0587 0.0771 0.344 cDC L2
ENSG00000093134 VNN3 581910 sc-eQTL 5.21e-01 -0.0492 0.0766 0.344 cDC L2
ENSG00000112299 VNN1 602620 sc-eQTL 6.93e-01 -0.0356 0.0901 0.344 cDC L2
ENSG00000112303 VNN2 553216 sc-eQTL 2.82e-01 -0.0944 0.0876 0.344 cDC L2
ENSG00000112306 RPS12 502106 sc-eQTL 7.44e-01 -0.0142 0.0434 0.344 cDC L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 2.53e-01 0.0982 0.0856 0.344 cDC L2
ENSG00000286438 AL591115.1 213547 sc-eQTL 1.57e-02 -0.165 0.0676 0.344 cDC L2
ENSG00000286887 AL355881.1 -979626 sc-eQTL 3.87e-01 0.0732 0.0843 0.344 cDC L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 9.12e-01 -0.00873 0.0789 0.344 cMono_IL1B L2
ENSG00000079950 STX7 803477 sc-eQTL 8.77e-01 -0.00928 0.0599 0.344 cMono_IL1B L2
ENSG00000093134 VNN3 581910 sc-eQTL 4.77e-01 -0.0603 0.0845 0.344 cMono_IL1B L2
ENSG00000112299 VNN1 602620 sc-eQTL 9.18e-02 -0.144 0.0848 0.344 cMono_IL1B L2
ENSG00000112303 VNN2 553216 sc-eQTL 5.14e-01 -0.0446 0.0682 0.344 cMono_IL1B L2
ENSG00000112306 RPS12 502106 sc-eQTL 6.40e-01 0.0178 0.0379 0.344 cMono_IL1B L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 9.87e-01 -0.00117 0.0732 0.344 cMono_IL1B L2
ENSG00000286887 AL355881.1 -979626 sc-eQTL 4.98e-01 0.0517 0.0761 0.344 cMono_IL1B L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 2.94e-01 0.095 0.0903 0.344 cMono_S100A L2
ENSG00000079950 STX7 803477 sc-eQTL 9.51e-01 0.00399 0.0654 0.344 cMono_S100A L2
ENSG00000093134 VNN3 581910 sc-eQTL 8.27e-01 0.0178 0.0817 0.344 cMono_S100A L2
ENSG00000112299 VNN1 602620 sc-eQTL 7.70e-01 -0.0259 0.0887 0.344 cMono_S100A L2
ENSG00000112303 VNN2 553216 sc-eQTL 4.30e-01 -0.0459 0.058 0.344 cMono_S100A L2
ENSG00000112306 RPS12 502106 sc-eQTL 4.37e-01 0.0325 0.0418 0.344 cMono_S100A L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 8.38e-01 -0.0159 0.0774 0.344 cMono_S100A L2
ENSG00000286887 AL355881.1 -979626 sc-eQTL 3.00e-01 -0.0786 0.0756 0.344 cMono_S100A L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 4.30e-01 -0.0881 0.111 0.345 gdT L2
ENSG00000079950 STX7 803477 sc-eQTL 1.20e-01 -0.149 0.0952 0.345 gdT L2
ENSG00000112303 VNN2 553216 sc-eQTL 9.17e-01 0.0111 0.106 0.345 gdT L2
ENSG00000112306 RPS12 502106 sc-eQTL 4.73e-01 0.029 0.0404 0.345 gdT L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 5.20e-01 -0.0674 0.104 0.345 gdT L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 6.66e-01 -0.0396 0.0916 0.336 intMono L2
ENSG00000079950 STX7 803477 sc-eQTL 7.29e-01 -0.0303 0.0875 0.336 intMono L2
ENSG00000093134 VNN3 581910 sc-eQTL 3.28e-01 -0.0865 0.0882 0.336 intMono L2
ENSG00000112299 VNN1 602620 sc-eQTL 7.90e-01 0.0233 0.0874 0.336 intMono L2
ENSG00000112303 VNN2 553216 sc-eQTL 7.75e-01 0.0254 0.0888 0.336 intMono L2
ENSG00000112306 RPS12 502106 sc-eQTL 9.24e-01 0.00371 0.0386 0.336 intMono L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 9.26e-01 0.00876 0.0941 0.336 intMono L2
ENSG00000286887 AL355881.1 -979626 sc-eQTL 9.95e-01 0.000531 0.09 0.336 intMono L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 2.63e-01 0.105 0.0931 0.346 ncMono L2
ENSG00000079950 STX7 803477 sc-eQTL 3.81e-01 -0.0554 0.063 0.346 ncMono L2
ENSG00000093134 VNN3 581910 sc-eQTL 7.28e-02 -0.159 0.0884 0.346 ncMono L2
ENSG00000112299 VNN1 602620 sc-eQTL 7.43e-02 -0.158 0.0878 0.346 ncMono L2
ENSG00000112303 VNN2 553216 sc-eQTL 8.14e-01 -0.02 0.0851 0.346 ncMono L2
ENSG00000112306 RPS12 502106 sc-eQTL 4.90e-01 -0.0294 0.0426 0.346 ncMono L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 4.72e-01 -0.0542 0.0753 0.346 ncMono L2
ENSG00000286887 AL355881.1 -979626 sc-eQTL 3.93e-01 0.068 0.0795 0.346 ncMono L2
ENSG00000028839 TBPL1 -635495 sc-eQTL 9.67e-02 0.184 0.11 0.345 pDC L2
ENSG00000079950 STX7 803477 sc-eQTL 3.40e-02 -0.156 0.073 0.345 pDC L2
ENSG00000093134 VNN3 581910 sc-eQTL 2.09e-01 0.0937 0.0742 0.345 pDC L2
ENSG00000112299 VNN1 602620 sc-eQTL 7.48e-01 -0.0244 0.0759 0.345 pDC L2
ENSG00000112303 VNN2 553216 sc-eQTL 6.99e-01 0.035 0.0903 0.345 pDC L2
ENSG00000112306 RPS12 502106 sc-eQTL 9.39e-01 0.0048 0.0622 0.345 pDC L2
ENSG00000146409 SLC18B1 503336 sc-eQTL 2.47e-01 0.107 0.0917 0.345 pDC L2
ENSG00000286438 AL591115.1 213547 sc-eQTL 4.21e-01 -0.0709 0.0879 0.345 pDC L2
ENSG00000286887 AL355881.1 -979626 sc-eQTL 2.02e-01 -0.0995 0.0777 0.345 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -635495 sc-eQTL 7.88e-01 -0.0252 0.0935 0.344 B_Memory LOneK1K
ENSG00000079931 MOXD1 915200 sc-eQTL 6.43e-01 0.0421 0.0908 0.344 B_Memory LOneK1K
ENSG00000079950 STX7 803477 sc-eQTL 3.88e-01 -0.0445 0.0514 0.344 B_Memory LOneK1K
ENSG00000112303 VNN2 553216 sc-eQTL 6.72e-01 0.0345 0.0814 0.344 B_Memory LOneK1K
ENSG00000112306 RPS12 502106 sc-eQTL 3.96e-01 0.0394 0.0463 0.344 B_Memory LOneK1K
ENSG00000146409 SLC18B1 503336 sc-eQTL 9.66e-01 -0.00358 0.0852 0.344 B_Memory LOneK1K
ENSG00000028839 TBPL1 -635495 sc-eQTL 4.40e-01 -0.0679 0.0878 0.344 B_Naive LOneK1K
ENSG00000079931 MOXD1 915200 sc-eQTL 4.48e-01 -0.0733 0.0964 0.344 B_Naive LOneK1K
ENSG00000079950 STX7 803477 sc-eQTL 8.82e-01 -0.00589 0.0396 0.344 B_Naive LOneK1K
ENSG00000112303 VNN2 553216 sc-eQTL 8.62e-01 0.0134 0.0769 0.344 B_Naive LOneK1K
ENSG00000112306 RPS12 502106 sc-eQTL 2.20e-01 0.0571 0.0464 0.344 B_Naive LOneK1K
ENSG00000146409 SLC18B1 503336 sc-eQTL 9.42e-01 -0.00641 0.0878 0.344 B_Naive LOneK1K
ENSG00000028839 TBPL1 -635495 sc-eQTL 3.16e-01 0.0719 0.0716 0.344 CD14_Mono LOneK1K
ENSG00000079950 STX7 803477 sc-eQTL 8.54e-01 0.00921 0.0499 0.344 CD14_Mono LOneK1K
ENSG00000093134 VNN3 581910 sc-eQTL 7.90e-01 -0.0217 0.0813 0.344 CD14_Mono LOneK1K
ENSG00000112299 VNN1 602620 sc-eQTL 3.79e-01 -0.0747 0.0847 0.344 CD14_Mono LOneK1K
ENSG00000112303 VNN2 553216 sc-eQTL 6.16e-01 -0.0282 0.0561 0.344 CD14_Mono LOneK1K
ENSG00000112306 RPS12 502106 sc-eQTL 6.50e-01 0.0175 0.0384 0.344 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 503336 sc-eQTL 1.00e+00 3.25e-05 0.0684 0.344 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -979626 sc-eQTL 8.93e-01 -0.0097 0.0718 0.344 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -635495 sc-eQTL 8.37e-01 0.0189 0.0918 0.343 CD16_Mono LOneK1K
ENSG00000079950 STX7 803477 sc-eQTL 8.12e-01 -0.0144 0.0606 0.343 CD16_Mono LOneK1K
ENSG00000093134 VNN3 581910 sc-eQTL 9.78e-03 -0.229 0.0877 0.343 CD16_Mono LOneK1K
ENSG00000112299 VNN1 602620 sc-eQTL 4.57e-02 -0.176 0.0875 0.343 CD16_Mono LOneK1K
ENSG00000112303 VNN2 553216 sc-eQTL 6.46e-01 -0.0383 0.0832 0.343 CD16_Mono LOneK1K
ENSG00000112306 RPS12 502106 sc-eQTL 9.82e-01 0.000819 0.0353 0.343 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 503336 sc-eQTL 5.53e-01 0.0509 0.0857 0.343 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -979626 sc-eQTL 1.89e-01 0.102 0.0772 0.343 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -635495 sc-eQTL 5.45e-01 0.0449 0.0741 0.343 NK_CD56dim LOneK1K
ENSG00000079950 STX7 803477 sc-eQTL 1.66e-02 -0.166 0.0687 0.343 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 553216 sc-eQTL 4.23e-01 -0.0707 0.088 0.343 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 502106 sc-eQTL 5.44e-01 0.0219 0.0359 0.343 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 602620 pQTL 0.00157 -0.113 0.0357 0.0 0.0 0.362

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina