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Genes within 1Mb (chr6:133309194:A:AT):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -642976 sc-eQTL 5.33e-01 0.0507 0.0811 0.44 B L1
ENSG00000079931 MOXD1 907719 sc-eQTL 5.72e-01 0.0485 0.0857 0.44 B L1
ENSG00000079950 STX7 795996 sc-eQTL 8.53e-01 0.00598 0.0323 0.44 B L1
ENSG00000112303 VNN2 545735 sc-eQTL 5.12e-01 -0.0399 0.0607 0.44 B L1
ENSG00000112306 RPS12 494625 sc-eQTL 8.87e-01 -0.00523 0.0368 0.44 B L1
ENSG00000146409 SLC18B1 495855 sc-eQTL 6.76e-01 0.0324 0.0773 0.44 B L1
ENSG00000028839 TBPL1 -642976 sc-eQTL 6.36e-01 -0.0283 0.0596 0.44 CD4T L1
ENSG00000079950 STX7 795996 sc-eQTL 1.12e-01 -0.0983 0.0616 0.44 CD4T L1
ENSG00000112303 VNN2 545735 sc-eQTL 4.06e-01 0.0446 0.0536 0.44 CD4T L1
ENSG00000112306 RPS12 494625 sc-eQTL 4.49e-01 -0.0277 0.0365 0.44 CD4T L1
ENSG00000146409 SLC18B1 495855 sc-eQTL 8.59e-01 -0.0131 0.0738 0.44 CD4T L1
ENSG00000028839 TBPL1 -642976 sc-eQTL 8.32e-01 0.0126 0.0592 0.44 CD8T L1
ENSG00000079950 STX7 795996 sc-eQTL 1.19e-02 0.154 0.0609 0.44 CD8T L1
ENSG00000112303 VNN2 545735 sc-eQTL 2.08e-01 0.0909 0.0719 0.44 CD8T L1
ENSG00000112306 RPS12 494625 sc-eQTL 4.75e-01 0.0176 0.0246 0.44 CD8T L1
ENSG00000146409 SLC18B1 495855 sc-eQTL 3.74e-01 0.0662 0.0744 0.44 CD8T L1
ENSG00000028839 TBPL1 -642976 sc-eQTL 7.02e-01 0.0345 0.0901 0.437 DC L1
ENSG00000079950 STX7 795996 sc-eQTL 7.42e-01 -0.0184 0.056 0.437 DC L1
ENSG00000093134 VNN3 574429 sc-eQTL 7.19e-02 0.125 0.0689 0.437 DC L1
ENSG00000112299 VNN1 595139 sc-eQTL 8.95e-01 -0.00991 0.0749 0.437 DC L1
ENSG00000112303 VNN2 545735 sc-eQTL 8.83e-01 0.0118 0.0802 0.437 DC L1
ENSG00000112306 RPS12 494625 sc-eQTL 1.01e-01 0.0737 0.0447 0.437 DC L1
ENSG00000146409 SLC18B1 495855 sc-eQTL 4.22e-01 -0.0572 0.071 0.437 DC L1
ENSG00000286438 AL591115.1 206066 sc-eQTL 4.23e-01 0.0519 0.0647 0.437 DC L1
ENSG00000286887 AL355881.1 -987107 sc-eQTL 6.04e-01 -0.0419 0.0807 0.437 DC L1
ENSG00000028839 TBPL1 -642976 sc-eQTL 5.18e-02 -0.122 0.0625 0.44 Mono L1
ENSG00000079950 STX7 795996 sc-eQTL 6.60e-01 -0.0186 0.0422 0.44 Mono L1
ENSG00000093134 VNN3 574429 sc-eQTL 2.53e-01 0.0827 0.0722 0.44 Mono L1
ENSG00000112299 VNN1 595139 sc-eQTL 2.46e-01 -0.0902 0.0776 0.44 Mono L1
ENSG00000112303 VNN2 545735 sc-eQTL 5.03e-02 0.107 0.0545 0.44 Mono L1
ENSG00000112306 RPS12 494625 sc-eQTL 5.40e-01 -0.0202 0.0329 0.44 Mono L1
ENSG00000146409 SLC18B1 495855 sc-eQTL 9.39e-01 -0.00497 0.0652 0.44 Mono L1
ENSG00000286887 AL355881.1 -987107 sc-eQTL 9.70e-01 -0.00245 0.064 0.44 Mono L1
ENSG00000028839 TBPL1 -642976 sc-eQTL 3.67e-02 -0.144 0.0684 0.44 NK L1
ENSG00000079950 STX7 795996 sc-eQTL 4.67e-01 0.0465 0.0638 0.44 NK L1
ENSG00000112303 VNN2 545735 sc-eQTL 6.57e-01 0.0353 0.0795 0.44 NK L1
ENSG00000112306 RPS12 494625 sc-eQTL 7.25e-01 -0.0116 0.0329 0.44 NK L1
ENSG00000028839 TBPL1 -642976 sc-eQTL 1.06e-01 0.13 0.0801 0.44 Other_T L1
ENSG00000079950 STX7 795996 sc-eQTL 9.19e-02 0.107 0.063 0.44 Other_T L1
ENSG00000112303 VNN2 545735 sc-eQTL 3.72e-01 -0.0685 0.0766 0.44 Other_T L1
ENSG00000112306 RPS12 494625 sc-eQTL 9.16e-01 0.00321 0.0304 0.44 Other_T L1
ENSG00000146409 SLC18B1 495855 sc-eQTL 9.45e-01 0.00574 0.0833 0.44 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -642976 sc-eQTL 9.26e-01 -0.00871 0.0935 0.429 B_Activated L2
ENSG00000079931 MOXD1 907719 sc-eQTL 9.14e-01 0.00918 0.0853 0.429 B_Activated L2
ENSG00000079950 STX7 795996 sc-eQTL 5.91e-01 0.043 0.08 0.429 B_Activated L2
ENSG00000112303 VNN2 545735 sc-eQTL 4.03e-01 -0.0712 0.085 0.429 B_Activated L2
ENSG00000112306 RPS12 494625 sc-eQTL 5.78e-01 0.0254 0.0456 0.429 B_Activated L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 8.33e-01 -0.0169 0.0799 0.429 B_Activated L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 1.28e-01 -0.136 0.089 0.44 B_Intermediate L2
ENSG00000079931 MOXD1 907719 sc-eQTL 4.30e-01 0.0621 0.0784 0.44 B_Intermediate L2
ENSG00000079950 STX7 795996 sc-eQTL 6.43e-01 0.0238 0.0514 0.44 B_Intermediate L2
ENSG00000112303 VNN2 545735 sc-eQTL 8.27e-01 0.0169 0.0774 0.44 B_Intermediate L2
ENSG00000112306 RPS12 494625 sc-eQTL 5.90e-01 -0.0256 0.0474 0.44 B_Intermediate L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 6.20e-01 -0.0423 0.0854 0.44 B_Intermediate L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 4.84e-01 0.0608 0.0868 0.442 B_Memory L2
ENSG00000079931 MOXD1 907719 sc-eQTL 9.45e-01 0.00556 0.0801 0.442 B_Memory L2
ENSG00000079950 STX7 795996 sc-eQTL 3.97e-01 0.0533 0.0628 0.442 B_Memory L2
ENSG00000112303 VNN2 545735 sc-eQTL 6.04e-01 0.0427 0.0822 0.442 B_Memory L2
ENSG00000112306 RPS12 494625 sc-eQTL 9.06e-01 -0.0047 0.0396 0.442 B_Memory L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 5.15e-01 -0.0538 0.0826 0.442 B_Memory L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 8.35e-01 0.0167 0.0801 0.44 B_Naive1 L2
ENSG00000079931 MOXD1 907719 sc-eQTL 5.39e-01 0.0542 0.088 0.44 B_Naive1 L2
ENSG00000079950 STX7 795996 sc-eQTL 7.18e-01 -0.0139 0.0385 0.44 B_Naive1 L2
ENSG00000112303 VNN2 545735 sc-eQTL 5.54e-01 -0.0443 0.0747 0.44 B_Naive1 L2
ENSG00000112306 RPS12 494625 sc-eQTL 2.10e-01 -0.0533 0.0424 0.44 B_Naive1 L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 1.70e-01 0.113 0.0818 0.44 B_Naive1 L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 5.00e-02 0.168 0.0852 0.442 B_Naive2 L2
ENSG00000079931 MOXD1 907719 sc-eQTL 5.68e-01 0.0478 0.0838 0.442 B_Naive2 L2
ENSG00000079950 STX7 795996 sc-eQTL 1.35e-01 0.0682 0.0454 0.442 B_Naive2 L2
ENSG00000112303 VNN2 545735 sc-eQTL 8.41e-01 -0.0168 0.0838 0.442 B_Naive2 L2
ENSG00000112306 RPS12 494625 sc-eQTL 2.82e-01 -0.0477 0.0443 0.442 B_Naive2 L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 4.89e-01 0.0586 0.0846 0.442 B_Naive2 L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 3.08e-01 -0.088 0.0861 0.441 CD4_CTL L2
ENSG00000079950 STX7 795996 sc-eQTL 1.47e-01 -0.124 0.0853 0.441 CD4_CTL L2
ENSG00000112303 VNN2 545735 sc-eQTL 5.33e-01 0.054 0.0864 0.441 CD4_CTL L2
ENSG00000112306 RPS12 494625 sc-eQTL 3.80e-01 -0.0351 0.0399 0.441 CD4_CTL L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 5.75e-01 -0.0452 0.0805 0.441 CD4_CTL L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 2.79e-01 0.0738 0.068 0.44 CD4_Naive L2
ENSG00000079950 STX7 795996 sc-eQTL 7.59e-02 -0.118 0.0664 0.44 CD4_Naive L2
ENSG00000112303 VNN2 545735 sc-eQTL 9.47e-01 0.00413 0.0619 0.44 CD4_Naive L2
ENSG00000112306 RPS12 494625 sc-eQTL 2.50e-01 -0.0462 0.0401 0.44 CD4_Naive L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 9.35e-01 -0.00632 0.0773 0.44 CD4_Naive L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 7.39e-01 -0.0244 0.0733 0.44 CD4_TCM L2
ENSG00000079950 STX7 795996 sc-eQTL 9.40e-01 0.00556 0.0739 0.44 CD4_TCM L2
ENSG00000112303 VNN2 545735 sc-eQTL 8.38e-02 0.126 0.0723 0.44 CD4_TCM L2
ENSG00000112306 RPS12 494625 sc-eQTL 5.59e-01 0.0221 0.0377 0.44 CD4_TCM L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 9.88e-01 0.00133 0.0874 0.44 CD4_TCM L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 7.43e-01 -0.0283 0.0861 0.44 CD4_TEM L2
ENSG00000079950 STX7 795996 sc-eQTL 1.79e-01 0.116 0.0858 0.44 CD4_TEM L2
ENSG00000112303 VNN2 545735 sc-eQTL 5.68e-01 -0.0473 0.0827 0.44 CD4_TEM L2
ENSG00000112306 RPS12 494625 sc-eQTL 3.97e-01 -0.0288 0.0339 0.44 CD4_TEM L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 8.61e-01 0.0148 0.0843 0.44 CD4_TEM L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 9.78e-01 0.00206 0.0749 0.44 CD8_CTL L2
ENSG00000079950 STX7 795996 sc-eQTL 2.94e-02 0.152 0.0692 0.44 CD8_CTL L2
ENSG00000112303 VNN2 545735 sc-eQTL 3.52e-01 0.074 0.0793 0.44 CD8_CTL L2
ENSG00000112306 RPS12 494625 sc-eQTL 6.68e-01 0.0183 0.0425 0.44 CD8_CTL L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 1.47e-01 0.119 0.082 0.44 CD8_CTL L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 2.62e-01 -0.0897 0.0798 0.44 CD8_Naive L2
ENSG00000079950 STX7 795996 sc-eQTL 9.09e-02 0.144 0.0847 0.44 CD8_Naive L2
ENSG00000112303 VNN2 545735 sc-eQTL 2.74e-01 0.0804 0.0734 0.44 CD8_Naive L2
ENSG00000112306 RPS12 494625 sc-eQTL 8.96e-01 -0.00554 0.0421 0.44 CD8_Naive L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 7.69e-01 0.0249 0.0845 0.44 CD8_Naive L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 6.06e-01 -0.0473 0.0915 0.451 CD8_TCM L2
ENSG00000079950 STX7 795996 sc-eQTL 5.84e-01 0.0465 0.0847 0.451 CD8_TCM L2
ENSG00000112303 VNN2 545735 sc-eQTL 8.67e-01 0.0141 0.0842 0.451 CD8_TCM L2
ENSG00000112306 RPS12 494625 sc-eQTL 1.56e-01 -0.0581 0.0408 0.451 CD8_TCM L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 1.91e-01 0.118 0.0895 0.451 CD8_TCM L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 2.59e-01 -0.0927 0.0819 0.432 CD8_TEM L2
ENSG00000079950 STX7 795996 sc-eQTL 8.07e-01 -0.022 0.0897 0.432 CD8_TEM L2
ENSG00000112303 VNN2 545735 sc-eQTL 2.66e-01 -0.0991 0.0889 0.432 CD8_TEM L2
ENSG00000112306 RPS12 494625 sc-eQTL 6.93e-01 -0.019 0.048 0.432 CD8_TEM L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 7.65e-01 -0.0272 0.0907 0.432 CD8_TEM L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 8.77e-01 0.0132 0.0852 0.442 MAIT L2
ENSG00000079950 STX7 795996 sc-eQTL 8.46e-01 0.0158 0.081 0.442 MAIT L2
ENSG00000112303 VNN2 545735 sc-eQTL 8.55e-01 0.015 0.0823 0.442 MAIT L2
ENSG00000112306 RPS12 494625 sc-eQTL 6.44e-01 -0.0188 0.0405 0.442 MAIT L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 7.19e-01 -0.0305 0.0849 0.442 MAIT L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 2.27e-01 0.11 0.0907 0.438 NK_CD56bright L2
ENSG00000079950 STX7 795996 sc-eQTL 8.86e-01 -0.0121 0.0844 0.438 NK_CD56bright L2
ENSG00000112303 VNN2 545735 sc-eQTL 9.20e-01 0.00858 0.0857 0.438 NK_CD56bright L2
ENSG00000112306 RPS12 494625 sc-eQTL 2.80e-01 0.0515 0.0476 0.438 NK_CD56bright L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 1.42e-02 -0.181 0.0731 0.44 NK_CD56dim L2
ENSG00000079950 STX7 795996 sc-eQTL 5.98e-01 0.0359 0.0678 0.44 NK_CD56dim L2
ENSG00000112303 VNN2 545735 sc-eQTL 4.69e-01 0.0616 0.0848 0.44 NK_CD56dim L2
ENSG00000112306 RPS12 494625 sc-eQTL 8.77e-01 -0.00524 0.0337 0.44 NK_CD56dim L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 9.23e-01 0.00895 0.0929 0.434 NK_HLA L2
ENSG00000079950 STX7 795996 sc-eQTL 6.47e-02 0.156 0.0838 0.434 NK_HLA L2
ENSG00000112303 VNN2 545735 sc-eQTL 1.52e-01 -0.123 0.0851 0.434 NK_HLA L2
ENSG00000112306 RPS12 494625 sc-eQTL 8.02e-01 0.00998 0.0399 0.434 NK_HLA L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 1.24e-01 -0.118 0.0767 0.44 NK_cytokine L2
ENSG00000079950 STX7 795996 sc-eQTL 5.59e-01 -0.0437 0.0747 0.44 NK_cytokine L2
ENSG00000112303 VNN2 545735 sc-eQTL 8.72e-01 -0.0135 0.084 0.44 NK_cytokine L2
ENSG00000112306 RPS12 494625 sc-eQTL 7.86e-01 0.0124 0.0456 0.44 NK_cytokine L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 7.94e-01 -0.0285 0.109 0.441 PB L2
ENSG00000079931 MOXD1 907719 sc-eQTL 4.00e-01 0.0785 0.0928 0.441 PB L2
ENSG00000079950 STX7 795996 sc-eQTL 3.29e-02 0.165 0.0762 0.441 PB L2
ENSG00000112303 VNN2 545735 sc-eQTL 7.74e-01 0.0273 0.0949 0.441 PB L2
ENSG00000112306 RPS12 494625 sc-eQTL 7.56e-01 -0.0168 0.0539 0.441 PB L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 2.71e-01 0.111 0.101 0.441 PB L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 7.15e-01 0.0319 0.0873 0.439 Pro_T L2
ENSG00000079950 STX7 795996 sc-eQTL 1.05e-01 0.126 0.0774 0.439 Pro_T L2
ENSG00000112303 VNN2 545735 sc-eQTL 6.68e-01 0.0359 0.0836 0.439 Pro_T L2
ENSG00000112306 RPS12 494625 sc-eQTL 8.17e-01 0.00732 0.0316 0.439 Pro_T L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 7.39e-01 -0.0273 0.0818 0.439 Pro_T L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 6.88e-01 -0.0354 0.088 0.44 Treg L2
ENSG00000079950 STX7 795996 sc-eQTL 5.34e-02 -0.16 0.0822 0.44 Treg L2
ENSG00000112303 VNN2 545735 sc-eQTL 6.90e-01 0.0279 0.0698 0.44 Treg L2
ENSG00000112306 RPS12 494625 sc-eQTL 8.58e-01 -0.00552 0.0309 0.44 Treg L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 1.74e-01 -0.118 0.0868 0.44 Treg L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 3.47e-01 0.086 0.0912 0.437 cDC L2
ENSG00000079950 STX7 795996 sc-eQTL 9.06e-01 -0.00844 0.0718 0.437 cDC L2
ENSG00000093134 VNN3 574429 sc-eQTL 7.87e-02 0.125 0.0707 0.437 cDC L2
ENSG00000112299 VNN1 595139 sc-eQTL 9.10e-01 -0.00951 0.0838 0.437 cDC L2
ENSG00000112303 VNN2 545735 sc-eQTL 8.31e-01 0.0175 0.0816 0.437 cDC L2
ENSG00000112306 RPS12 494625 sc-eQTL 6.03e-02 0.0755 0.0399 0.437 cDC L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 9.58e-01 0.0042 0.0798 0.437 cDC L2
ENSG00000286438 AL591115.1 206066 sc-eQTL 2.67e-01 0.0708 0.0636 0.437 cDC L2
ENSG00000286887 AL355881.1 -987107 sc-eQTL 2.80e-01 -0.0847 0.0783 0.437 cDC L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 1.84e-01 -0.0954 0.0716 0.44 cMono_IL1B L2
ENSG00000079950 STX7 795996 sc-eQTL 9.24e-01 0.00522 0.0546 0.44 cMono_IL1B L2
ENSG00000093134 VNN3 574429 sc-eQTL 3.58e-01 0.071 0.077 0.44 cMono_IL1B L2
ENSG00000112299 VNN1 595139 sc-eQTL 4.99e-01 -0.0526 0.0777 0.44 cMono_IL1B L2
ENSG00000112303 VNN2 545735 sc-eQTL 2.09e-01 0.0781 0.062 0.44 cMono_IL1B L2
ENSG00000112306 RPS12 494625 sc-eQTL 5.20e-01 -0.0223 0.0345 0.44 cMono_IL1B L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 2.66e-01 -0.0741 0.0665 0.44 cMono_IL1B L2
ENSG00000286887 AL355881.1 -987107 sc-eQTL 8.91e-01 -0.00949 0.0694 0.44 cMono_IL1B L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 2.65e-01 -0.0914 0.0818 0.44 cMono_S100A L2
ENSG00000079950 STX7 795996 sc-eQTL 4.74e-01 -0.0424 0.0592 0.44 cMono_S100A L2
ENSG00000093134 VNN3 574429 sc-eQTL 7.91e-01 -0.0196 0.074 0.44 cMono_S100A L2
ENSG00000112299 VNN1 595139 sc-eQTL 1.52e-01 -0.115 0.0799 0.44 cMono_S100A L2
ENSG00000112303 VNN2 545735 sc-eQTL 1.40e-01 0.0776 0.0523 0.44 cMono_S100A L2
ENSG00000112306 RPS12 494625 sc-eQTL 2.75e-01 -0.0413 0.0378 0.44 cMono_S100A L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 2.45e-01 0.0815 0.0699 0.44 cMono_S100A L2
ENSG00000286887 AL355881.1 -987107 sc-eQTL 5.66e-01 0.0394 0.0685 0.44 cMono_S100A L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 5.43e-01 0.069 0.113 0.427 gdT L2
ENSG00000079950 STX7 795996 sc-eQTL 7.15e-01 0.0357 0.0974 0.427 gdT L2
ENSG00000112303 VNN2 545735 sc-eQTL 3.49e-01 -0.101 0.107 0.427 gdT L2
ENSG00000112306 RPS12 494625 sc-eQTL 6.62e-01 0.018 0.041 0.427 gdT L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 4.35e-01 0.0829 0.106 0.427 gdT L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 4.86e-01 -0.058 0.0831 0.444 intMono L2
ENSG00000079950 STX7 795996 sc-eQTL 4.83e-01 -0.0558 0.0794 0.444 intMono L2
ENSG00000093134 VNN3 574429 sc-eQTL 2.22e-02 0.183 0.0792 0.444 intMono L2
ENSG00000112299 VNN1 595139 sc-eQTL 3.53e-01 -0.0737 0.0791 0.444 intMono L2
ENSG00000112303 VNN2 545735 sc-eQTL 6.64e-01 -0.035 0.0806 0.444 intMono L2
ENSG00000112306 RPS12 494625 sc-eQTL 7.76e-01 0.00997 0.0351 0.444 intMono L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 6.63e-01 0.0373 0.0854 0.444 intMono L2
ENSG00000286887 AL355881.1 -987107 sc-eQTL 2.98e-01 -0.0849 0.0815 0.444 intMono L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 5.78e-01 -0.0493 0.0885 0.441 ncMono L2
ENSG00000079950 STX7 795996 sc-eQTL 3.78e-01 0.0528 0.0598 0.441 ncMono L2
ENSG00000093134 VNN3 574429 sc-eQTL 1.70e-01 0.116 0.0841 0.441 ncMono L2
ENSG00000112299 VNN1 595139 sc-eQTL 5.84e-01 -0.046 0.0838 0.441 ncMono L2
ENSG00000112303 VNN2 545735 sc-eQTL 5.11e-01 0.0531 0.0806 0.441 ncMono L2
ENSG00000112306 RPS12 494625 sc-eQTL 9.68e-01 -0.0016 0.0405 0.441 ncMono L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 4.08e-01 0.0591 0.0713 0.441 ncMono L2
ENSG00000286887 AL355881.1 -987107 sc-eQTL 7.42e-01 0.0249 0.0755 0.441 ncMono L2
ENSG00000028839 TBPL1 -642976 sc-eQTL 5.55e-01 -0.0607 0.102 0.435 pDC L2
ENSG00000079950 STX7 795996 sc-eQTL 3.34e-01 0.066 0.0681 0.435 pDC L2
ENSG00000093134 VNN3 574429 sc-eQTL 4.41e-01 0.053 0.0686 0.435 pDC L2
ENSG00000112299 VNN1 595139 sc-eQTL 6.32e-01 -0.0336 0.0699 0.435 pDC L2
ENSG00000112303 VNN2 545735 sc-eQTL 4.19e-01 0.0673 0.0831 0.435 pDC L2
ENSG00000112306 RPS12 494625 sc-eQTL 1.25e-01 0.0879 0.0569 0.435 pDC L2
ENSG00000146409 SLC18B1 495855 sc-eQTL 8.00e-01 0.0215 0.0849 0.435 pDC L2
ENSG00000286438 AL591115.1 206066 sc-eQTL 2.37e-01 0.0959 0.0809 0.435 pDC L2
ENSG00000286887 AL355881.1 -987107 sc-eQTL 8.87e-01 -0.0102 0.0721 0.435 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -642976 sc-eQTL 2.41e-01 -0.102 0.0865 0.44 B_Memory LOneK1K
ENSG00000079931 MOXD1 907719 sc-eQTL 3.74e-01 0.075 0.0842 0.44 B_Memory LOneK1K
ENSG00000079950 STX7 795996 sc-eQTL 5.86e-01 0.026 0.0477 0.44 B_Memory LOneK1K
ENSG00000112303 VNN2 545735 sc-eQTL 9.47e-01 0.00502 0.0756 0.44 B_Memory LOneK1K
ENSG00000112306 RPS12 494625 sc-eQTL 7.15e-01 -0.0157 0.043 0.44 B_Memory LOneK1K
ENSG00000146409 SLC18B1 495855 sc-eQTL 7.73e-01 -0.0228 0.079 0.44 B_Memory LOneK1K
ENSG00000028839 TBPL1 -642976 sc-eQTL 2.16e-01 0.1 0.0806 0.44 B_Naive LOneK1K
ENSG00000079931 MOXD1 907719 sc-eQTL 5.14e-01 0.058 0.0887 0.44 B_Naive LOneK1K
ENSG00000079950 STX7 795996 sc-eQTL 7.09e-01 0.0136 0.0364 0.44 B_Naive LOneK1K
ENSG00000112303 VNN2 545735 sc-eQTL 6.74e-01 -0.0298 0.0708 0.44 B_Naive LOneK1K
ENSG00000112306 RPS12 494625 sc-eQTL 3.43e-01 -0.0406 0.0427 0.44 B_Naive LOneK1K
ENSG00000146409 SLC18B1 495855 sc-eQTL 1.94e-01 0.105 0.0805 0.44 B_Naive LOneK1K
ENSG00000028839 TBPL1 -642976 sc-eQTL 6.21e-02 -0.122 0.0649 0.44 CD14_Mono LOneK1K
ENSG00000079950 STX7 795996 sc-eQTL 5.75e-01 -0.0255 0.0455 0.44 CD14_Mono LOneK1K
ENSG00000093134 VNN3 574429 sc-eQTL 4.42e-01 0.057 0.0741 0.44 CD14_Mono LOneK1K
ENSG00000112299 VNN1 595139 sc-eQTL 2.02e-01 -0.0986 0.0771 0.44 CD14_Mono LOneK1K
ENSG00000112303 VNN2 545735 sc-eQTL 1.80e-01 0.0686 0.051 0.44 CD14_Mono LOneK1K
ENSG00000112306 RPS12 494625 sc-eQTL 5.97e-01 -0.0186 0.0351 0.44 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 495855 sc-eQTL 8.14e-01 -0.0147 0.0624 0.44 CD14_Mono LOneK1K
ENSG00000286887 AL355881.1 -987107 sc-eQTL 6.65e-01 0.0284 0.0655 0.44 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -642976 sc-eQTL 4.81e-01 -0.0602 0.0853 0.44 CD16_Mono LOneK1K
ENSG00000079950 STX7 795996 sc-eQTL 8.36e-01 0.0117 0.0563 0.44 CD16_Mono LOneK1K
ENSG00000093134 VNN3 574429 sc-eQTL 1.65e-03 0.258 0.0809 0.44 CD16_Mono LOneK1K
ENSG00000112299 VNN1 595139 sc-eQTL 9.72e-01 -0.00285 0.0821 0.44 CD16_Mono LOneK1K
ENSG00000112303 VNN2 545735 sc-eQTL 4.34e-01 0.0606 0.0773 0.44 CD16_Mono LOneK1K
ENSG00000112306 RPS12 494625 sc-eQTL 5.07e-01 -0.0218 0.0328 0.44 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 495855 sc-eQTL 4.10e-01 0.0658 0.0796 0.44 CD16_Mono LOneK1K
ENSG00000286887 AL355881.1 -987107 sc-eQTL 1.50e-01 -0.104 0.0718 0.44 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -642976 sc-eQTL 9.93e-03 -0.175 0.0672 0.44 NK_CD56dim LOneK1K
ENSG00000079950 STX7 795996 sc-eQTL 5.63e-01 0.0371 0.0641 0.44 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 545735 sc-eQTL 6.51e-01 0.0367 0.0812 0.44 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 494625 sc-eQTL 8.89e-01 -0.00465 0.0331 0.44 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 595139 pQTL 0.000142 -0.135 0.0355 0.0 0.0 0.397
ENSG00000112299 VNN1 595139 eQTL 0.00308 -0.0647 0.0218 0.0 0.0 0.401
ENSG00000112303 VNN2 545735 pQTL 0.00697 0.0692 0.0256 0.0 0.0 0.397
ENSG00000112303 VNN2 545735 eQTL 0.0115 0.033 0.013 0.0 0.0 0.401
ENSG00000146409 SLC18B1 495855 eQTL 0.00276 0.0671 0.0224 0.0 0.0 0.401
ENSG00000234484 AL032821.1 556519 eQTL 0.0417 -0.0638 0.0313 0.0 0.0 0.401

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000112299 VNN1 595139 3.62e-07 4.24e-07 6.57e-08 2.92e-07 1.05e-07 1.44e-07 4.42e-07 5.43e-08 3.03e-07 1.03e-07 2.68e-07 2.33e-07 4.54e-07 9.18e-08 6.2e-08 1.01e-07 4.45e-08 2.33e-07 1.56e-07 5.61e-08 1.24e-07 2.7e-07 2.63e-07 3.83e-08 2.37e-07 1.76e-07 1.29e-07 1.42e-07 1.48e-07 2.19e-07 1.35e-07 3.98e-08 3.74e-08 1.24e-07 4.41e-08 2.69e-08 6.29e-08 5.25e-08 5.77e-08 5.72e-08 4.92e-08 1.64e-07 1.67e-08 1.05e-08 5.43e-08 1.81e-08 9.29e-08 2.02e-09 4.81e-08