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Genes within 1Mb (chr6:133282420:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -669750 sc-eQTL 5.42e-01 0.0507 0.0831 0.423 B L1
ENSG00000079931 MOXD1 880945 sc-eQTL 4.36e-01 0.0684 0.0877 0.423 B L1
ENSG00000079950 STX7 769222 sc-eQTL 5.60e-01 -0.0193 0.0331 0.423 B L1
ENSG00000112303 VNN2 518961 sc-eQTL 9.93e-01 -0.000569 0.0623 0.423 B L1
ENSG00000112306 RPS12 467851 sc-eQTL 8.35e-01 0.00784 0.0376 0.423 B L1
ENSG00000146409 SLC18B1 469081 sc-eQTL 4.45e-01 0.0606 0.0791 0.423 B L1
ENSG00000028839 TBPL1 -669750 sc-eQTL 7.87e-01 -0.0166 0.0613 0.423 CD4T L1
ENSG00000079950 STX7 769222 sc-eQTL 6.15e-02 -0.119 0.0632 0.423 CD4T L1
ENSG00000112303 VNN2 518961 sc-eQTL 3.13e-01 0.0557 0.0551 0.423 CD4T L1
ENSG00000112306 RPS12 467851 sc-eQTL 9.31e-01 0.00326 0.0375 0.423 CD4T L1
ENSG00000146409 SLC18B1 469081 sc-eQTL 8.09e-01 -0.0183 0.0759 0.423 CD4T L1
ENSG00000028839 TBPL1 -669750 sc-eQTL 8.95e-01 0.00806 0.061 0.423 CD8T L1
ENSG00000079950 STX7 769222 sc-eQTL 1.53e-02 0.154 0.0628 0.423 CD8T L1
ENSG00000112303 VNN2 518961 sc-eQTL 1.12e-01 0.118 0.074 0.423 CD8T L1
ENSG00000112306 RPS12 467851 sc-eQTL 1.67e-01 0.0351 0.0253 0.423 CD8T L1
ENSG00000146409 SLC18B1 469081 sc-eQTL 6.27e-01 0.0374 0.0768 0.423 CD8T L1
ENSG00000028839 TBPL1 -669750 sc-eQTL 4.31e-01 0.0738 0.0934 0.419 DC L1
ENSG00000079950 STX7 769222 sc-eQTL 9.56e-01 -0.00319 0.0582 0.419 DC L1
ENSG00000093134 VNN3 547655 sc-eQTL 4.89e-02 0.142 0.0714 0.419 DC L1
ENSG00000112299 VNN1 568365 sc-eQTL 9.28e-01 0.00709 0.0779 0.419 DC L1
ENSG00000112303 VNN2 518961 sc-eQTL 7.90e-01 0.0222 0.0833 0.419 DC L1
ENSG00000112306 RPS12 467851 sc-eQTL 1.86e-01 0.0617 0.0465 0.419 DC L1
ENSG00000146409 SLC18B1 469081 sc-eQTL 5.99e-01 -0.0389 0.0739 0.419 DC L1
ENSG00000286438 AL591115.1 179292 sc-eQTL 2.38e-01 0.0793 0.067 0.419 DC L1
ENSG00000028839 TBPL1 -669750 sc-eQTL 1.87e-02 -0.152 0.0643 0.423 Mono L1
ENSG00000079950 STX7 769222 sc-eQTL 7.60e-01 -0.0134 0.0436 0.423 Mono L1
ENSG00000093134 VNN3 547655 sc-eQTL 2.14e-01 0.0929 0.0745 0.423 Mono L1
ENSG00000112299 VNN1 568365 sc-eQTL 3.45e-01 -0.076 0.0803 0.423 Mono L1
ENSG00000112303 VNN2 518961 sc-eQTL 2.60e-02 0.126 0.0561 0.423 Mono L1
ENSG00000112306 RPS12 467851 sc-eQTL 8.44e-01 0.00672 0.034 0.423 Mono L1
ENSG00000146409 SLC18B1 469081 sc-eQTL 9.05e-01 -0.00807 0.0673 0.423 Mono L1
ENSG00000028839 TBPL1 -669750 sc-eQTL 2.36e-02 -0.161 0.0706 0.423 NK L1
ENSG00000079950 STX7 769222 sc-eQTL 4.94e-01 0.0452 0.066 0.423 NK L1
ENSG00000112303 VNN2 518961 sc-eQTL 4.80e-01 0.0582 0.0821 0.423 NK L1
ENSG00000112306 RPS12 467851 sc-eQTL 5.86e-01 0.0185 0.034 0.423 NK L1
ENSG00000028839 TBPL1 -669750 sc-eQTL 2.83e-01 0.0891 0.0828 0.423 Other_T L1
ENSG00000079950 STX7 769222 sc-eQTL 4.15e-01 0.0533 0.0652 0.423 Other_T L1
ENSG00000112303 VNN2 518961 sc-eQTL 6.95e-01 -0.031 0.079 0.423 Other_T L1
ENSG00000112306 RPS12 467851 sc-eQTL 7.40e-01 0.0104 0.0313 0.423 Other_T L1
ENSG00000146409 SLC18B1 469081 sc-eQTL 8.19e-01 0.0196 0.0857 0.423 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -669750 sc-eQTL 6.51e-01 0.0435 0.096 0.408 B_Activated L2
ENSG00000079931 MOXD1 880945 sc-eQTL 5.28e-01 -0.0555 0.0876 0.408 B_Activated L2
ENSG00000079950 STX7 769222 sc-eQTL 4.29e-01 0.0651 0.0821 0.408 B_Activated L2
ENSG00000112303 VNN2 518961 sc-eQTL 7.57e-01 -0.0271 0.0875 0.408 B_Activated L2
ENSG00000112306 RPS12 467851 sc-eQTL 3.12e-01 0.0474 0.0468 0.408 B_Activated L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 6.43e-01 -0.0382 0.0821 0.408 B_Activated L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 1.25e-01 -0.143 0.0926 0.423 B_Intermediate L2
ENSG00000079931 MOXD1 880945 sc-eQTL 6.34e-01 0.0389 0.0817 0.423 B_Intermediate L2
ENSG00000079950 STX7 769222 sc-eQTL 7.93e-01 -0.0141 0.0535 0.423 B_Intermediate L2
ENSG00000112303 VNN2 518961 sc-eQTL 6.06e-01 0.0416 0.0805 0.423 B_Intermediate L2
ENSG00000112306 RPS12 467851 sc-eQTL 6.58e-01 -0.0219 0.0493 0.423 B_Intermediate L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 6.84e-01 -0.0362 0.0888 0.423 B_Intermediate L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 3.60e-01 0.0831 0.0905 0.425 B_Memory L2
ENSG00000079931 MOXD1 880945 sc-eQTL 8.48e-01 0.016 0.0836 0.425 B_Memory L2
ENSG00000079950 STX7 769222 sc-eQTL 7.59e-01 -0.0202 0.0656 0.425 B_Memory L2
ENSG00000112303 VNN2 518961 sc-eQTL 3.12e-01 0.0868 0.0856 0.425 B_Memory L2
ENSG00000112306 RPS12 467851 sc-eQTL 6.08e-01 0.0212 0.0413 0.425 B_Memory L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 5.08e-01 -0.0571 0.0862 0.425 B_Memory L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 6.30e-01 0.0397 0.0823 0.423 B_Naive1 L2
ENSG00000079931 MOXD1 880945 sc-eQTL 2.52e-01 0.104 0.0902 0.423 B_Naive1 L2
ENSG00000079950 STX7 769222 sc-eQTL 4.05e-01 -0.033 0.0395 0.423 B_Naive1 L2
ENSG00000112303 VNN2 518961 sc-eQTL 6.65e-01 -0.0333 0.0768 0.423 B_Naive1 L2
ENSG00000112306 RPS12 467851 sc-eQTL 5.05e-01 -0.0292 0.0437 0.423 B_Naive1 L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 2.41e-01 0.099 0.0841 0.423 B_Naive1 L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 7.06e-02 0.16 0.0881 0.425 B_Naive2 L2
ENSG00000079931 MOXD1 880945 sc-eQTL 4.03e-01 0.0724 0.0864 0.425 B_Naive2 L2
ENSG00000079950 STX7 769222 sc-eQTL 2.59e-01 0.0532 0.047 0.425 B_Naive2 L2
ENSG00000112303 VNN2 518961 sc-eQTL 9.41e-01 0.00644 0.0866 0.425 B_Naive2 L2
ENSG00000112306 RPS12 467851 sc-eQTL 4.87e-01 -0.0319 0.0458 0.425 B_Naive2 L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 1.91e-01 0.114 0.0871 0.425 B_Naive2 L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 8.19e-01 -0.0204 0.0889 0.425 CD4_CTL L2
ENSG00000079950 STX7 769222 sc-eQTL 4.04e-01 -0.0737 0.0881 0.425 CD4_CTL L2
ENSG00000112303 VNN2 518961 sc-eQTL 6.80e-01 0.0368 0.089 0.425 CD4_CTL L2
ENSG00000112306 RPS12 467851 sc-eQTL 9.37e-01 -0.00324 0.0411 0.425 CD4_CTL L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 8.01e-01 -0.0209 0.0829 0.425 CD4_CTL L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 3.52e-01 0.0654 0.0701 0.423 CD4_Naive L2
ENSG00000079950 STX7 769222 sc-eQTL 2.76e-02 -0.151 0.0681 0.423 CD4_Naive L2
ENSG00000112303 VNN2 518961 sc-eQTL 8.75e-01 0.0101 0.0638 0.423 CD4_Naive L2
ENSG00000112306 RPS12 467851 sc-eQTL 5.20e-01 -0.0266 0.0414 0.423 CD4_Naive L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 9.36e-01 -0.00642 0.0797 0.423 CD4_Naive L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 9.27e-01 0.00693 0.0754 0.423 CD4_TCM L2
ENSG00000079950 STX7 769222 sc-eQTL 8.71e-01 0.0124 0.0759 0.423 CD4_TCM L2
ENSG00000112303 VNN2 518961 sc-eQTL 4.18e-02 0.152 0.0741 0.423 CD4_TCM L2
ENSG00000112306 RPS12 467851 sc-eQTL 1.04e-01 0.0629 0.0385 0.423 CD4_TCM L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 9.52e-01 0.00541 0.0898 0.423 CD4_TCM L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 9.54e-01 -0.0051 0.0884 0.423 CD4_TEM L2
ENSG00000079950 STX7 769222 sc-eQTL 1.79e-01 0.119 0.0882 0.423 CD4_TEM L2
ENSG00000112303 VNN2 518961 sc-eQTL 8.35e-01 -0.0177 0.085 0.423 CD4_TEM L2
ENSG00000112306 RPS12 467851 sc-eQTL 8.27e-01 -0.00761 0.0348 0.423 CD4_TEM L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 8.01e-01 -0.0218 0.0866 0.423 CD4_TEM L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 8.96e-01 0.0101 0.0772 0.423 CD8_CTL L2
ENSG00000079950 STX7 769222 sc-eQTL 4.09e-02 0.147 0.0714 0.423 CD8_CTL L2
ENSG00000112303 VNN2 518961 sc-eQTL 3.20e-01 0.0815 0.0818 0.423 CD8_CTL L2
ENSG00000112306 RPS12 467851 sc-eQTL 9.05e-01 0.00523 0.0439 0.423 CD8_CTL L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 2.08e-01 0.107 0.0847 0.423 CD8_CTL L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 3.43e-01 -0.0782 0.0823 0.423 CD8_Naive L2
ENSG00000079950 STX7 769222 sc-eQTL 1.68e-01 0.121 0.0875 0.423 CD8_Naive L2
ENSG00000112303 VNN2 518961 sc-eQTL 1.86e-01 0.1 0.0755 0.423 CD8_Naive L2
ENSG00000112306 RPS12 467851 sc-eQTL 5.88e-01 0.0236 0.0434 0.423 CD8_Naive L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 8.52e-01 0.0163 0.0871 0.423 CD8_Naive L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 9.03e-01 -0.0116 0.0945 0.435 CD8_TCM L2
ENSG00000079950 STX7 769222 sc-eQTL 3.39e-01 0.0837 0.0873 0.435 CD8_TCM L2
ENSG00000112303 VNN2 518961 sc-eQTL 4.79e-01 0.0615 0.0867 0.435 CD8_TCM L2
ENSG00000112306 RPS12 467851 sc-eQTL 4.17e-01 -0.0343 0.0422 0.435 CD8_TCM L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 3.69e-01 0.0834 0.0925 0.435 CD8_TCM L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 3.89e-01 -0.0733 0.085 0.413 CD8_TEM L2
ENSG00000079950 STX7 769222 sc-eQTL 8.56e-01 -0.0169 0.093 0.413 CD8_TEM L2
ENSG00000112303 VNN2 518961 sc-eQTL 3.12e-01 -0.0935 0.0922 0.413 CD8_TEM L2
ENSG00000112306 RPS12 467851 sc-eQTL 7.86e-01 0.0135 0.0497 0.413 CD8_TEM L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 6.38e-01 -0.0443 0.094 0.413 CD8_TEM L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 9.84e-01 0.0018 0.0885 0.424 MAIT L2
ENSG00000079950 STX7 769222 sc-eQTL 9.27e-01 -0.00777 0.0841 0.424 MAIT L2
ENSG00000112303 VNN2 518961 sc-eQTL 9.37e-01 0.00676 0.0856 0.424 MAIT L2
ENSG00000112306 RPS12 467851 sc-eQTL 8.66e-01 0.00713 0.0421 0.424 MAIT L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 8.51e-01 -0.0166 0.0882 0.424 MAIT L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 3.00e-01 0.0976 0.0938 0.42 NK_CD56bright L2
ENSG00000079950 STX7 769222 sc-eQTL 6.05e-01 -0.0452 0.0872 0.42 NK_CD56bright L2
ENSG00000112303 VNN2 518961 sc-eQTL 7.50e-01 0.0282 0.0885 0.42 NK_CD56bright L2
ENSG00000112306 RPS12 467851 sc-eQTL 4.55e-02 0.0983 0.0489 0.42 NK_CD56bright L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 1.12e-02 -0.193 0.0755 0.422 NK_CD56dim L2
ENSG00000079950 STX7 769222 sc-eQTL 4.92e-01 0.0483 0.0702 0.422 NK_CD56dim L2
ENSG00000112303 VNN2 518961 sc-eQTL 4.49e-01 0.0665 0.0877 0.422 NK_CD56dim L2
ENSG00000112306 RPS12 467851 sc-eQTL 5.36e-01 0.0216 0.0348 0.422 NK_CD56dim L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 8.58e-01 0.017 0.095 0.416 NK_HLA L2
ENSG00000079950 STX7 769222 sc-eQTL 2.87e-01 0.0919 0.0862 0.416 NK_HLA L2
ENSG00000112303 VNN2 518961 sc-eQTL 2.85e-01 -0.0934 0.0872 0.416 NK_HLA L2
ENSG00000112306 RPS12 467851 sc-eQTL 3.50e-01 0.0381 0.0407 0.416 NK_HLA L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 8.74e-02 -0.136 0.079 0.422 NK_cytokine L2
ENSG00000079950 STX7 769222 sc-eQTL 5.58e-01 -0.0451 0.077 0.422 NK_cytokine L2
ENSG00000112303 VNN2 518961 sc-eQTL 7.72e-01 0.0251 0.0866 0.422 NK_cytokine L2
ENSG00000112306 RPS12 467851 sc-eQTL 2.64e-01 0.0524 0.0468 0.422 NK_cytokine L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 9.80e-01 -0.0029 0.114 0.422 PB L2
ENSG00000079931 MOXD1 880945 sc-eQTL 8.16e-01 0.0227 0.0974 0.422 PB L2
ENSG00000079950 STX7 769222 sc-eQTL 2.41e-01 0.0954 0.0808 0.422 PB L2
ENSG00000112303 VNN2 518961 sc-eQTL 7.95e-01 0.0258 0.0993 0.422 PB L2
ENSG00000112306 RPS12 467851 sc-eQTL 9.76e-01 -0.00173 0.0564 0.422 PB L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 8.31e-01 0.0227 0.106 0.422 PB L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 9.57e-01 0.00479 0.0894 0.422 Pro_T L2
ENSG00000079950 STX7 769222 sc-eQTL 1.68e-01 0.11 0.0795 0.422 Pro_T L2
ENSG00000112303 VNN2 518961 sc-eQTL 3.08e-01 0.0872 0.0854 0.422 Pro_T L2
ENSG00000112306 RPS12 467851 sc-eQTL 4.80e-01 0.0229 0.0324 0.422 Pro_T L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 6.79e-01 -0.0347 0.0838 0.422 Pro_T L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 5.82e-01 -0.0502 0.0911 0.423 Treg L2
ENSG00000079950 STX7 769222 sc-eQTL 2.00e-02 -0.199 0.0848 0.423 Treg L2
ENSG00000112303 VNN2 518961 sc-eQTL 4.62e-01 0.0532 0.0722 0.423 Treg L2
ENSG00000112306 RPS12 467851 sc-eQTL 6.38e-01 0.0151 0.032 0.423 Treg L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 4.11e-01 -0.0743 0.0902 0.423 Treg L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 2.97e-01 0.0984 0.0941 0.417 cDC L2
ENSG00000079950 STX7 769222 sc-eQTL 8.60e-01 -0.0131 0.0741 0.417 cDC L2
ENSG00000093134 VNN3 547655 sc-eQTL 1.31e-01 0.111 0.0731 0.417 cDC L2
ENSG00000112299 VNN1 568365 sc-eQTL 9.23e-01 -0.0084 0.0865 0.417 cDC L2
ENSG00000112303 VNN2 518961 sc-eQTL 7.97e-01 -0.0217 0.0843 0.417 cDC L2
ENSG00000112306 RPS12 467851 sc-eQTL 1.21e-01 0.0644 0.0413 0.417 cDC L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 8.23e-01 0.0185 0.0824 0.417 cDC L2
ENSG00000286438 AL591115.1 179292 sc-eQTL 1.21e-01 0.102 0.0655 0.417 cDC L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 8.57e-02 -0.127 0.0735 0.423 cMono_IL1B L2
ENSG00000079950 STX7 769222 sc-eQTL 6.34e-01 0.0267 0.0561 0.423 cMono_IL1B L2
ENSG00000093134 VNN3 547655 sc-eQTL 2.69e-01 0.0877 0.0792 0.423 cMono_IL1B L2
ENSG00000112299 VNN1 568365 sc-eQTL 7.13e-01 -0.0294 0.0801 0.423 cMono_IL1B L2
ENSG00000112303 VNN2 518961 sc-eQTL 1.38e-01 0.095 0.0637 0.423 cMono_IL1B L2
ENSG00000112306 RPS12 467851 sc-eQTL 8.17e-01 0.00823 0.0356 0.423 cMono_IL1B L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 2.66e-01 -0.0764 0.0684 0.423 cMono_IL1B L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 6.22e-01 -0.0418 0.0847 0.423 cMono_S100A L2
ENSG00000079950 STX7 769222 sc-eQTL 4.51e-01 -0.0461 0.0611 0.423 cMono_S100A L2
ENSG00000093134 VNN3 547655 sc-eQTL 9.55e-01 -0.00433 0.0765 0.423 cMono_S100A L2
ENSG00000112299 VNN1 568365 sc-eQTL 1.52e-01 -0.119 0.0826 0.423 cMono_S100A L2
ENSG00000112303 VNN2 518961 sc-eQTL 6.47e-02 0.1 0.0539 0.423 cMono_S100A L2
ENSG00000112306 RPS12 467851 sc-eQTL 6.73e-01 -0.0166 0.0391 0.423 cMono_S100A L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 1.75e-01 0.0983 0.0721 0.423 cMono_S100A L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 8.15e-01 0.0268 0.114 0.406 gdT L2
ENSG00000079950 STX7 769222 sc-eQTL 9.78e-01 0.00275 0.0982 0.406 gdT L2
ENSG00000112303 VNN2 518961 sc-eQTL 5.24e-01 -0.0693 0.108 0.406 gdT L2
ENSG00000112306 RPS12 467851 sc-eQTL 8.73e-01 0.00663 0.0414 0.406 gdT L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 4.88e-01 0.0742 0.107 0.406 gdT L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 3.01e-01 -0.0894 0.0861 0.427 intMono L2
ENSG00000079950 STX7 769222 sc-eQTL 3.89e-01 -0.0711 0.0823 0.427 intMono L2
ENSG00000093134 VNN3 547655 sc-eQTL 4.16e-03 0.236 0.0816 0.427 intMono L2
ENSG00000112299 VNN1 568365 sc-eQTL 5.00e-01 -0.0556 0.0822 0.427 intMono L2
ENSG00000112303 VNN2 518961 sc-eQTL 4.51e-01 -0.0631 0.0836 0.427 intMono L2
ENSG00000112306 RPS12 467851 sc-eQTL 2.28e-01 0.0439 0.0363 0.427 intMono L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 8.64e-01 0.0152 0.0886 0.427 intMono L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 5.42e-01 -0.0562 0.0921 0.423 ncMono L2
ENSG00000079950 STX7 769222 sc-eQTL 1.75e-01 0.0843 0.062 0.423 ncMono L2
ENSG00000093134 VNN3 547655 sc-eQTL 2.26e-01 0.106 0.0876 0.423 ncMono L2
ENSG00000112299 VNN1 568365 sc-eQTL 6.84e-01 -0.0356 0.0872 0.423 ncMono L2
ENSG00000112303 VNN2 518961 sc-eQTL 5.41e-01 0.0513 0.0838 0.423 ncMono L2
ENSG00000112306 RPS12 467851 sc-eQTL 7.40e-01 0.014 0.0421 0.423 ncMono L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 1.92e-01 0.097 0.074 0.423 ncMono L2
ENSG00000028839 TBPL1 -669750 sc-eQTL 8.97e-01 0.0138 0.106 0.412 pDC L2
ENSG00000079950 STX7 769222 sc-eQTL 3.73e-01 0.063 0.0705 0.412 pDC L2
ENSG00000093134 VNN3 547655 sc-eQTL 4.64e-01 0.0522 0.071 0.412 pDC L2
ENSG00000112299 VNN1 568365 sc-eQTL 9.43e-01 -0.00518 0.0724 0.412 pDC L2
ENSG00000112303 VNN2 518961 sc-eQTL 2.56e-01 0.0978 0.0859 0.412 pDC L2
ENSG00000112306 RPS12 467851 sc-eQTL 9.63e-02 0.0985 0.0588 0.412 pDC L2
ENSG00000146409 SLC18B1 469081 sc-eQTL 4.66e-01 0.0641 0.0878 0.412 pDC L2
ENSG00000286438 AL591115.1 179292 sc-eQTL 1.93e-01 0.109 0.0836 0.412 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -669750 sc-eQTL 2.58e-01 -0.102 0.0897 0.423 B_Memory LOneK1K
ENSG00000079931 MOXD1 880945 sc-eQTL 5.43e-01 0.0533 0.0874 0.423 B_Memory LOneK1K
ENSG00000079950 STX7 769222 sc-eQTL 7.39e-01 -0.0165 0.0495 0.423 B_Memory LOneK1K
ENSG00000112303 VNN2 518961 sc-eQTL 4.08e-01 0.0648 0.0782 0.423 B_Memory LOneK1K
ENSG00000112306 RPS12 467851 sc-eQTL 9.85e-01 -0.000834 0.0446 0.423 B_Memory LOneK1K
ENSG00000146409 SLC18B1 469081 sc-eQTL 7.39e-01 -0.0273 0.0819 0.423 B_Memory LOneK1K
ENSG00000028839 TBPL1 -669750 sc-eQTL 1.87e-01 0.109 0.0827 0.423 B_Naive LOneK1K
ENSG00000079931 MOXD1 880945 sc-eQTL 2.41e-01 0.107 0.0908 0.423 B_Naive LOneK1K
ENSG00000079950 STX7 769222 sc-eQTL 8.46e-01 -0.00726 0.0374 0.423 B_Naive LOneK1K
ENSG00000112303 VNN2 518961 sc-eQTL 8.95e-01 -0.00957 0.0726 0.423 B_Naive LOneK1K
ENSG00000112306 RPS12 467851 sc-eQTL 6.35e-01 -0.0209 0.0439 0.423 B_Naive LOneK1K
ENSG00000146409 SLC18B1 469081 sc-eQTL 1.28e-01 0.126 0.0824 0.423 B_Naive LOneK1K
ENSG00000028839 TBPL1 -669750 sc-eQTL 5.74e-02 -0.128 0.0669 0.423 CD14_Mono LOneK1K
ENSG00000079950 STX7 769222 sc-eQTL 6.98e-01 -0.0182 0.0469 0.423 CD14_Mono LOneK1K
ENSG00000093134 VNN3 547655 sc-eQTL 3.13e-01 0.0772 0.0763 0.423 CD14_Mono LOneK1K
ENSG00000112299 VNN1 568365 sc-eQTL 2.77e-01 -0.0867 0.0795 0.423 CD14_Mono LOneK1K
ENSG00000112303 VNN2 518961 sc-eQTL 9.34e-02 0.0883 0.0524 0.423 CD14_Mono LOneK1K
ENSG00000112306 RPS12 467851 sc-eQTL 7.55e-01 0.0113 0.0362 0.423 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 469081 sc-eQTL 7.78e-01 -0.0182 0.0643 0.423 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -669750 sc-eQTL 2.74e-01 -0.0964 0.0879 0.422 CD16_Mono LOneK1K
ENSG00000079950 STX7 769222 sc-eQTL 6.67e-01 0.025 0.0581 0.422 CD16_Mono LOneK1K
ENSG00000093134 VNN3 547655 sc-eQTL 7.81e-04 0.284 0.0833 0.422 CD16_Mono LOneK1K
ENSG00000112299 VNN1 568365 sc-eQTL 8.67e-01 0.0142 0.0848 0.422 CD16_Mono LOneK1K
ENSG00000112303 VNN2 518961 sc-eQTL 6.51e-01 0.0362 0.0799 0.422 CD16_Mono LOneK1K
ENSG00000112306 RPS12 467851 sc-eQTL 7.78e-01 0.00959 0.0339 0.422 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 469081 sc-eQTL 4.38e-01 0.0639 0.0822 0.422 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -669750 sc-eQTL 5.93e-03 -0.193 0.0693 0.422 NK_CD56dim LOneK1K
ENSG00000079950 STX7 769222 sc-eQTL 5.46e-01 0.04 0.0662 0.422 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 518961 sc-eQTL 4.85e-01 0.0586 0.0838 0.422 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 467851 sc-eQTL 5.11e-01 0.0225 0.0342 0.422 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000093134 VNN3 547655 eQTL 0.0271 0.0328 0.0148 0.0 0.0 0.373
ENSG00000112299 VNN1 568365 pQTL 5.01e-07 -0.18 0.0356 0.0 0.0 0.372
ENSG00000112299 VNN1 568365 eQTL 0.000186 -0.0824 0.022 0.0 0.0 0.373
ENSG00000112303 VNN2 518961 pQTL 0.0007 0.0875 0.0258 0.0 0.0 0.372
ENSG00000146409 SLC18B1 469081 eQTL 0.0118 0.0571 0.0226 0.0 0.0 0.373

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000112299 VNN1 568365 7.23e-07 3.35e-07 9.16e-08 2.79e-07 1.08e-07 1.57e-07 4.25e-07 9.91e-08 3.62e-07 2.01e-07 4.64e-07 3.11e-07 5.81e-07 1.01e-07 1.32e-07 1.92e-07 1.62e-07 3.39e-07 1.51e-07 8.11e-08 1.68e-07 2.96e-07 2.81e-07 1.15e-07 5.53e-07 2.4e-07 1.97e-07 1.95e-07 2.66e-07 3.15e-07 2e-07 6.78e-08 5.64e-08 1.25e-07 2.15e-07 6.73e-08 9.52e-08 6.31e-08 5.86e-08 7.39e-08 4.4e-08 3.26e-07 3.14e-08 1.13e-08 8.01e-08 9.49e-09 9.68e-08 2.85e-09 5.69e-08