logo

Genes within 1Mb (chr6:133280550:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -671620 sc-eQTL 6.13e-01 0.0429 0.0846 0.434 B L1
ENSG00000079931 MOXD1 879075 sc-eQTL 3.59e-01 0.082 0.0892 0.434 B L1
ENSG00000079950 STX7 767352 sc-eQTL 4.97e-01 -0.0229 0.0337 0.434 B L1
ENSG00000112303 VNN2 517091 sc-eQTL 9.24e-01 0.00608 0.0634 0.434 B L1
ENSG00000112306 RPS12 465981 sc-eQTL 9.58e-01 -0.00202 0.0383 0.434 B L1
ENSG00000146409 SLC18B1 467211 sc-eQTL 6.53e-01 0.0363 0.0806 0.434 B L1
ENSG00000028839 TBPL1 -671620 sc-eQTL 7.04e-01 -0.0236 0.0622 0.434 CD4T L1
ENSG00000079950 STX7 767352 sc-eQTL 1.21e-01 -0.1 0.0643 0.434 CD4T L1
ENSG00000112303 VNN2 517091 sc-eQTL 3.22e-01 0.0554 0.0559 0.434 CD4T L1
ENSG00000112306 RPS12 465981 sc-eQTL 7.89e-01 -0.0102 0.0381 0.434 CD4T L1
ENSG00000146409 SLC18B1 467211 sc-eQTL 8.17e-01 -0.0178 0.077 0.434 CD4T L1
ENSG00000028839 TBPL1 -671620 sc-eQTL 7.80e-01 0.0174 0.062 0.434 CD8T L1
ENSG00000079950 STX7 767352 sc-eQTL 1.13e-02 0.163 0.0638 0.434 CD8T L1
ENSG00000112303 VNN2 517091 sc-eQTL 1.01e-01 0.124 0.0751 0.434 CD8T L1
ENSG00000112306 RPS12 465981 sc-eQTL 2.50e-01 0.0297 0.0257 0.434 CD8T L1
ENSG00000146409 SLC18B1 467211 sc-eQTL 6.25e-01 0.0383 0.078 0.434 CD8T L1
ENSG00000028839 TBPL1 -671620 sc-eQTL 3.32e-01 0.0924 0.095 0.428 DC L1
ENSG00000079950 STX7 767352 sc-eQTL 9.12e-01 -0.00653 0.0592 0.428 DC L1
ENSG00000093134 VNN3 545785 sc-eQTL 2.57e-01 0.0831 0.0731 0.428 DC L1
ENSG00000112299 VNN1 566495 sc-eQTL 9.49e-01 0.00504 0.0792 0.428 DC L1
ENSG00000112303 VNN2 517091 sc-eQTL 7.65e-01 0.0253 0.0847 0.428 DC L1
ENSG00000112306 RPS12 465981 sc-eQTL 1.81e-01 0.0635 0.0473 0.428 DC L1
ENSG00000146409 SLC18B1 467211 sc-eQTL 8.42e-01 -0.015 0.0752 0.428 DC L1
ENSG00000286438 AL591115.1 177422 sc-eQTL 1.27e-01 0.104 0.068 0.428 DC L1
ENSG00000028839 TBPL1 -671620 sc-eQTL 5.11e-02 -0.129 0.0658 0.434 Mono L1
ENSG00000079950 STX7 767352 sc-eQTL 7.22e-01 -0.0158 0.0444 0.434 Mono L1
ENSG00000093134 VNN3 545785 sc-eQTL 2.69e-01 0.0843 0.076 0.434 Mono L1
ENSG00000112299 VNN1 566495 sc-eQTL 7.41e-02 -0.146 0.0814 0.434 Mono L1
ENSG00000112303 VNN2 517091 sc-eQTL 1.18e-02 0.145 0.057 0.434 Mono L1
ENSG00000112306 RPS12 465981 sc-eQTL 9.71e-01 -0.00128 0.0347 0.434 Mono L1
ENSG00000146409 SLC18B1 467211 sc-eQTL 9.10e-01 -0.0078 0.0686 0.434 Mono L1
ENSG00000028839 TBPL1 -671620 sc-eQTL 4.37e-02 -0.147 0.0723 0.433 NK L1
ENSG00000079950 STX7 767352 sc-eQTL 3.39e-01 0.0646 0.0674 0.433 NK L1
ENSG00000112303 VNN2 517091 sc-eQTL 4.22e-01 0.0675 0.0839 0.433 NK L1
ENSG00000112306 RPS12 465981 sc-eQTL 7.59e-01 0.0107 0.0348 0.433 NK L1
ENSG00000028839 TBPL1 -671620 sc-eQTL 2.41e-01 0.0987 0.0839 0.434 Other_T L1
ENSG00000079950 STX7 767352 sc-eQTL 5.84e-01 0.0363 0.0662 0.434 Other_T L1
ENSG00000112303 VNN2 517091 sc-eQTL 6.29e-01 -0.0388 0.0801 0.434 Other_T L1
ENSG00000112306 RPS12 465981 sc-eQTL 7.28e-01 0.0111 0.0318 0.434 Other_T L1
ENSG00000146409 SLC18B1 467211 sc-eQTL 8.21e-01 0.0197 0.087 0.434 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -671620 sc-eQTL 7.69e-01 0.0284 0.0968 0.421 B_Activated L2
ENSG00000079931 MOXD1 879075 sc-eQTL 5.25e-01 -0.0563 0.0884 0.421 B_Activated L2
ENSG00000079950 STX7 767352 sc-eQTL 6.30e-01 0.0399 0.0829 0.421 B_Activated L2
ENSG00000112303 VNN2 517091 sc-eQTL 7.74e-01 -0.0254 0.0883 0.421 B_Activated L2
ENSG00000112306 RPS12 465981 sc-eQTL 3.99e-01 0.0399 0.0472 0.421 B_Activated L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 4.41e-01 -0.0638 0.0827 0.421 B_Activated L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 2.38e-01 -0.112 0.0943 0.433 B_Intermediate L2
ENSG00000079931 MOXD1 879075 sc-eQTL 6.36e-01 0.0393 0.083 0.433 B_Intermediate L2
ENSG00000079950 STX7 767352 sc-eQTL 9.79e-01 -0.00145 0.0544 0.433 B_Intermediate L2
ENSG00000112303 VNN2 517091 sc-eQTL 5.09e-01 0.0541 0.0818 0.433 B_Intermediate L2
ENSG00000112306 RPS12 465981 sc-eQTL 3.59e-01 -0.046 0.0501 0.433 B_Intermediate L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 7.05e-01 -0.0342 0.0903 0.433 B_Intermediate L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 3.73e-01 0.0823 0.0921 0.435 B_Memory L2
ENSG00000079931 MOXD1 879075 sc-eQTL 8.24e-01 -0.0189 0.0851 0.435 B_Memory L2
ENSG00000079950 STX7 767352 sc-eQTL 8.63e-01 0.0116 0.0668 0.435 B_Memory L2
ENSG00000112303 VNN2 517091 sc-eQTL 2.52e-01 0.1 0.0871 0.435 B_Memory L2
ENSG00000112306 RPS12 465981 sc-eQTL 7.60e-01 0.0129 0.0421 0.435 B_Memory L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 2.86e-01 -0.0937 0.0876 0.435 B_Memory L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 5.65e-01 0.0481 0.0836 0.434 B_Naive1 L2
ENSG00000079931 MOXD1 879075 sc-eQTL 1.97e-01 0.119 0.0916 0.434 B_Naive1 L2
ENSG00000079950 STX7 767352 sc-eQTL 3.25e-01 -0.0396 0.0401 0.434 B_Naive1 L2
ENSG00000112303 VNN2 517091 sc-eQTL 5.51e-01 -0.0466 0.078 0.434 B_Naive1 L2
ENSG00000112306 RPS12 465981 sc-eQTL 3.45e-01 -0.042 0.0444 0.434 B_Naive1 L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 3.69e-01 0.0772 0.0857 0.434 B_Naive1 L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 1.95e-01 0.117 0.0897 0.436 B_Naive2 L2
ENSG00000079931 MOXD1 879075 sc-eQTL 7.26e-01 0.0308 0.0878 0.436 B_Naive2 L2
ENSG00000079950 STX7 767352 sc-eQTL 3.78e-01 0.0422 0.0478 0.436 B_Naive2 L2
ENSG00000112303 VNN2 517091 sc-eQTL 7.49e-01 0.0282 0.0878 0.436 B_Naive2 L2
ENSG00000112306 RPS12 465981 sc-eQTL 4.35e-01 -0.0363 0.0465 0.436 B_Naive2 L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 4.04e-01 0.0741 0.0886 0.436 B_Naive2 L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 8.25e-01 -0.02 0.0903 0.434 CD4_CTL L2
ENSG00000079950 STX7 767352 sc-eQTL 4.98e-01 -0.0609 0.0896 0.434 CD4_CTL L2
ENSG00000112303 VNN2 517091 sc-eQTL 4.91e-01 0.0624 0.0904 0.434 CD4_CTL L2
ENSG00000112306 RPS12 465981 sc-eQTL 8.58e-01 0.00747 0.0418 0.434 CD4_CTL L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 9.13e-01 0.00927 0.0843 0.434 CD4_CTL L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 3.72e-01 0.0635 0.0709 0.434 CD4_Naive L2
ENSG00000079950 STX7 767352 sc-eQTL 4.26e-02 -0.141 0.069 0.434 CD4_Naive L2
ENSG00000112303 VNN2 517091 sc-eQTL 9.74e-01 -0.00214 0.0646 0.434 CD4_Naive L2
ENSG00000112306 RPS12 465981 sc-eQTL 3.48e-01 -0.0393 0.0418 0.434 CD4_Naive L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 9.66e-01 -0.00349 0.0806 0.434 CD4_Naive L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 7.94e-01 -0.02 0.0766 0.434 CD4_TCM L2
ENSG00000079950 STX7 767352 sc-eQTL 8.68e-01 -0.0128 0.0772 0.434 CD4_TCM L2
ENSG00000112303 VNN2 517091 sc-eQTL 7.55e-02 0.135 0.0755 0.434 CD4_TCM L2
ENSG00000112306 RPS12 465981 sc-eQTL 3.03e-01 0.0406 0.0393 0.434 CD4_TCM L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 9.46e-01 0.00618 0.0913 0.434 CD4_TCM L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 8.88e-01 -0.0126 0.0894 0.434 CD4_TEM L2
ENSG00000079950 STX7 767352 sc-eQTL 1.46e-01 0.13 0.0891 0.434 CD4_TEM L2
ENSG00000112303 VNN2 517091 sc-eQTL 8.71e-01 -0.014 0.0859 0.434 CD4_TEM L2
ENSG00000112306 RPS12 465981 sc-eQTL 4.10e-01 -0.0291 0.0352 0.434 CD4_TEM L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 9.01e-01 0.011 0.0876 0.434 CD4_TEM L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 8.49e-01 -0.0149 0.0784 0.434 CD8_CTL L2
ENSG00000079950 STX7 767352 sc-eQTL 1.89e-02 0.171 0.0723 0.434 CD8_CTL L2
ENSG00000112303 VNN2 517091 sc-eQTL 3.78e-01 0.0733 0.0831 0.434 CD8_CTL L2
ENSG00000112306 RPS12 465981 sc-eQTL 9.82e-01 0.00103 0.0445 0.434 CD8_CTL L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 3.33e-01 0.0836 0.0861 0.434 CD8_CTL L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 4.84e-01 -0.0585 0.0835 0.434 CD8_Naive L2
ENSG00000079950 STX7 767352 sc-eQTL 1.35e-01 0.133 0.0886 0.434 CD8_Naive L2
ENSG00000112303 VNN2 517091 sc-eQTL 2.77e-01 0.0834 0.0766 0.434 CD8_Naive L2
ENSG00000112306 RPS12 465981 sc-eQTL 8.31e-01 0.00938 0.044 0.434 CD8_Naive L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 7.92e-01 0.0233 0.0882 0.434 CD8_Naive L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 9.21e-01 -0.00957 0.0964 0.444 CD8_TCM L2
ENSG00000079950 STX7 767352 sc-eQTL 3.72e-01 0.0797 0.089 0.444 CD8_TCM L2
ENSG00000112303 VNN2 517091 sc-eQTL 8.33e-01 0.0186 0.0885 0.444 CD8_TCM L2
ENSG00000112306 RPS12 465981 sc-eQTL 3.65e-01 -0.0391 0.0431 0.444 CD8_TCM L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 4.24e-01 0.0756 0.0944 0.444 CD8_TCM L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 3.31e-01 -0.0845 0.0867 0.427 CD8_TEM L2
ENSG00000079950 STX7 767352 sc-eQTL 6.06e-01 -0.049 0.0948 0.427 CD8_TEM L2
ENSG00000112303 VNN2 517091 sc-eQTL 3.87e-01 -0.0817 0.0942 0.427 CD8_TEM L2
ENSG00000112306 RPS12 465981 sc-eQTL 7.75e-01 0.0145 0.0507 0.427 CD8_TEM L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 8.74e-01 -0.0152 0.096 0.427 CD8_TEM L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 8.42e-01 0.0179 0.0897 0.433 MAIT L2
ENSG00000079950 STX7 767352 sc-eQTL 5.10e-01 -0.0563 0.0852 0.433 MAIT L2
ENSG00000112303 VNN2 517091 sc-eQTL 6.74e-01 -0.0365 0.0867 0.433 MAIT L2
ENSG00000112306 RPS12 465981 sc-eQTL 8.78e-01 -0.00653 0.0426 0.433 MAIT L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 9.32e-01 -0.00769 0.0894 0.433 MAIT L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 3.07e-01 0.0979 0.0957 0.433 NK_CD56bright L2
ENSG00000079950 STX7 767352 sc-eQTL 4.26e-01 -0.0709 0.0888 0.433 NK_CD56bright L2
ENSG00000112303 VNN2 517091 sc-eQTL 8.61e-01 -0.0158 0.0903 0.433 NK_CD56bright L2
ENSG00000112306 RPS12 465981 sc-eQTL 5.16e-02 0.0976 0.0499 0.433 NK_CD56bright L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 2.61e-02 -0.173 0.0773 0.433 NK_CD56dim L2
ENSG00000079950 STX7 767352 sc-eQTL 4.15e-01 0.0585 0.0715 0.433 NK_CD56dim L2
ENSG00000112303 VNN2 517091 sc-eQTL 2.98e-01 0.0933 0.0894 0.433 NK_CD56dim L2
ENSG00000112306 RPS12 465981 sc-eQTL 8.32e-01 0.00756 0.0356 0.433 NK_CD56dim L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 8.67e-01 0.0163 0.0968 0.427 NK_HLA L2
ENSG00000079950 STX7 767352 sc-eQTL 2.23e-01 0.107 0.0878 0.427 NK_HLA L2
ENSG00000112303 VNN2 517091 sc-eQTL 2.49e-01 -0.103 0.0889 0.427 NK_HLA L2
ENSG00000112306 RPS12 465981 sc-eQTL 4.98e-01 0.0282 0.0415 0.427 NK_HLA L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 8.13e-02 -0.141 0.0806 0.433 NK_cytokine L2
ENSG00000079950 STX7 767352 sc-eQTL 7.82e-01 -0.0217 0.0786 0.433 NK_cytokine L2
ENSG00000112303 VNN2 517091 sc-eQTL 7.45e-01 0.0287 0.0883 0.433 NK_cytokine L2
ENSG00000112306 RPS12 465981 sc-eQTL 2.39e-01 0.0565 0.0478 0.433 NK_cytokine L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 9.60e-01 -0.00581 0.115 0.43 PB L2
ENSG00000079931 MOXD1 879075 sc-eQTL 7.09e-01 0.0367 0.0978 0.43 PB L2
ENSG00000079950 STX7 767352 sc-eQTL 3.34e-01 0.079 0.0814 0.43 PB L2
ENSG00000112303 VNN2 517091 sc-eQTL 8.50e-01 0.019 0.0998 0.43 PB L2
ENSG00000112306 RPS12 465981 sc-eQTL 9.87e-01 0.000904 0.0567 0.43 PB L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 9.03e-01 0.013 0.106 0.43 PB L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 9.80e-01 -0.00225 0.0907 0.433 Pro_T L2
ENSG00000079950 STX7 767352 sc-eQTL 1.02e-01 0.132 0.0804 0.433 Pro_T L2
ENSG00000112303 VNN2 517091 sc-eQTL 3.77e-01 0.0768 0.0867 0.433 Pro_T L2
ENSG00000112306 RPS12 465981 sc-eQTL 6.54e-01 0.0147 0.0328 0.433 Pro_T L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 6.96e-01 -0.0333 0.085 0.433 Pro_T L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 3.88e-01 -0.0798 0.0923 0.434 Treg L2
ENSG00000079950 STX7 767352 sc-eQTL 9.20e-02 -0.147 0.0866 0.434 Treg L2
ENSG00000112303 VNN2 517091 sc-eQTL 3.66e-01 0.0664 0.0732 0.434 Treg L2
ENSG00000112306 RPS12 465981 sc-eQTL 7.16e-01 0.0118 0.0324 0.434 Treg L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 8.91e-01 -0.0125 0.0916 0.434 Treg L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 2.54e-01 0.109 0.0953 0.424 cDC L2
ENSG00000079950 STX7 767352 sc-eQTL 8.05e-01 -0.0186 0.0751 0.424 cDC L2
ENSG00000093134 VNN3 545785 sc-eQTL 3.78e-01 0.0658 0.0744 0.424 cDC L2
ENSG00000112299 VNN1 566495 sc-eQTL 8.41e-01 -0.0176 0.0877 0.424 cDC L2
ENSG00000112303 VNN2 517091 sc-eQTL 8.55e-01 -0.0156 0.0855 0.424 cDC L2
ENSG00000112306 RPS12 465981 sc-eQTL 2.67e-01 0.0469 0.042 0.424 cDC L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 6.02e-01 0.0437 0.0835 0.424 cDC L2
ENSG00000286438 AL591115.1 177422 sc-eQTL 2.24e-01 0.0812 0.0665 0.424 cDC L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 9.64e-02 -0.125 0.0747 0.434 cMono_IL1B L2
ENSG00000079950 STX7 767352 sc-eQTL 3.69e-01 0.0513 0.057 0.434 cMono_IL1B L2
ENSG00000093134 VNN3 545785 sc-eQTL 3.44e-01 0.0763 0.0805 0.434 cMono_IL1B L2
ENSG00000112299 VNN1 566495 sc-eQTL 2.00e-01 -0.104 0.0811 0.434 cMono_IL1B L2
ENSG00000112303 VNN2 517091 sc-eQTL 1.08e-01 0.104 0.0647 0.434 cMono_IL1B L2
ENSG00000112306 RPS12 465981 sc-eQTL 9.98e-01 0.000109 0.0361 0.434 cMono_IL1B L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 3.22e-01 -0.0691 0.0696 0.434 cMono_IL1B L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 8.29e-01 -0.0186 0.0862 0.434 cMono_S100A L2
ENSG00000079950 STX7 767352 sc-eQTL 3.82e-01 -0.0545 0.0622 0.434 cMono_S100A L2
ENSG00000093134 VNN3 545785 sc-eQTL 9.26e-01 -0.00723 0.0778 0.434 cMono_S100A L2
ENSG00000112299 VNN1 566495 sc-eQTL 3.20e-02 -0.18 0.0836 0.434 cMono_S100A L2
ENSG00000112303 VNN2 517091 sc-eQTL 2.41e-02 0.124 0.0547 0.434 cMono_S100A L2
ENSG00000112306 RPS12 465981 sc-eQTL 5.59e-01 -0.0233 0.0398 0.434 cMono_S100A L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 3.06e-01 0.0755 0.0736 0.434 cMono_S100A L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 6.88e-01 0.0469 0.116 0.421 gdT L2
ENSG00000079950 STX7 767352 sc-eQTL 8.38e-01 -0.0204 0.1 0.421 gdT L2
ENSG00000112303 VNN2 517091 sc-eQTL 6.30e-01 -0.0535 0.111 0.421 gdT L2
ENSG00000112306 RPS12 465981 sc-eQTL 9.14e-01 0.00454 0.0422 0.421 gdT L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 3.65e-01 0.0987 0.109 0.421 gdT L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 5.62e-01 -0.0509 0.0878 0.438 intMono L2
ENSG00000079950 STX7 767352 sc-eQTL 2.66e-01 -0.0934 0.0836 0.438 intMono L2
ENSG00000093134 VNN3 545785 sc-eQTL 1.39e-02 0.207 0.0834 0.438 intMono L2
ENSG00000112299 VNN1 566495 sc-eQTL 2.70e-01 -0.0924 0.0835 0.438 intMono L2
ENSG00000112303 VNN2 517091 sc-eQTL 1.95e-01 -0.11 0.0848 0.438 intMono L2
ENSG00000112306 RPS12 465981 sc-eQTL 5.58e-01 0.0217 0.037 0.438 intMono L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 6.20e-01 0.0448 0.0901 0.438 intMono L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 6.72e-01 -0.0396 0.0935 0.434 ncMono L2
ENSG00000079950 STX7 767352 sc-eQTL 3.83e-01 0.0552 0.0631 0.434 ncMono L2
ENSG00000093134 VNN3 545785 sc-eQTL 4.10e-01 0.0736 0.0891 0.434 ncMono L2
ENSG00000112299 VNN1 566495 sc-eQTL 3.89e-01 -0.0764 0.0885 0.434 ncMono L2
ENSG00000112303 VNN2 517091 sc-eQTL 4.60e-01 0.063 0.0851 0.434 ncMono L2
ENSG00000112306 RPS12 465981 sc-eQTL 8.29e-01 0.00927 0.0427 0.434 ncMono L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 3.14e-01 0.0761 0.0753 0.434 ncMono L2
ENSG00000028839 TBPL1 -671620 sc-eQTL 9.60e-01 -0.0054 0.108 0.427 pDC L2
ENSG00000079950 STX7 767352 sc-eQTL 3.68e-01 0.0645 0.0715 0.427 pDC L2
ENSG00000093134 VNN3 545785 sc-eQTL 9.58e-01 -0.00382 0.0722 0.427 pDC L2
ENSG00000112299 VNN1 566495 sc-eQTL 9.31e-01 -0.00637 0.0735 0.427 pDC L2
ENSG00000112303 VNN2 517091 sc-eQTL 1.55e-01 0.124 0.0869 0.427 pDC L2
ENSG00000112306 RPS12 465981 sc-eQTL 8.02e-02 0.105 0.0596 0.427 pDC L2
ENSG00000146409 SLC18B1 467211 sc-eQTL 4.38e-01 0.0692 0.089 0.427 pDC L2
ENSG00000286438 AL591115.1 177422 sc-eQTL 1.00e-01 0.14 0.0846 0.427 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -671620 sc-eQTL 3.21e-01 -0.0906 0.0911 0.434 B_Memory LOneK1K
ENSG00000079931 MOXD1 879075 sc-eQTL 6.11e-01 0.0451 0.0887 0.434 B_Memory LOneK1K
ENSG00000079950 STX7 767352 sc-eQTL 9.92e-01 0.000483 0.0503 0.434 B_Memory LOneK1K
ENSG00000112303 VNN2 517091 sc-eQTL 2.57e-01 0.09 0.0793 0.434 B_Memory LOneK1K
ENSG00000112306 RPS12 465981 sc-eQTL 5.64e-01 -0.0262 0.0453 0.434 B_Memory LOneK1K
ENSG00000146409 SLC18B1 467211 sc-eQTL 5.50e-01 -0.0498 0.0831 0.434 B_Memory LOneK1K
ENSG00000028839 TBPL1 -671620 sc-eQTL 2.42e-01 0.0986 0.0841 0.434 B_Naive LOneK1K
ENSG00000079931 MOXD1 879075 sc-eQTL 2.79e-01 0.1 0.0924 0.434 B_Naive LOneK1K
ENSG00000079950 STX7 767352 sc-eQTL 6.08e-01 -0.0195 0.038 0.434 B_Naive LOneK1K
ENSG00000112303 VNN2 517091 sc-eQTL 8.95e-01 -0.00976 0.0738 0.434 B_Naive LOneK1K
ENSG00000112306 RPS12 465981 sc-eQTL 4.59e-01 -0.0331 0.0446 0.434 B_Naive LOneK1K
ENSG00000146409 SLC18B1 467211 sc-eQTL 2.40e-01 0.0988 0.084 0.434 B_Naive LOneK1K
ENSG00000028839 TBPL1 -671620 sc-eQTL 1.02e-01 -0.112 0.0683 0.434 CD14_Mono LOneK1K
ENSG00000079950 STX7 767352 sc-eQTL 8.06e-01 -0.0118 0.0478 0.434 CD14_Mono LOneK1K
ENSG00000093134 VNN3 545785 sc-eQTL 4.05e-01 0.0649 0.0778 0.434 CD14_Mono LOneK1K
ENSG00000112299 VNN1 566495 sc-eQTL 5.32e-02 -0.157 0.0805 0.434 CD14_Mono LOneK1K
ENSG00000112303 VNN2 517091 sc-eQTL 4.54e-02 0.107 0.0532 0.434 CD14_Mono LOneK1K
ENSG00000112306 RPS12 465981 sc-eQTL 9.19e-01 0.00375 0.0368 0.434 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 467211 sc-eQTL 6.86e-01 -0.0266 0.0655 0.434 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -671620 sc-eQTL 4.66e-01 -0.0653 0.0893 0.433 CD16_Mono LOneK1K
ENSG00000079950 STX7 767352 sc-eQTL 9.14e-01 -0.00638 0.059 0.433 CD16_Mono LOneK1K
ENSG00000093134 VNN3 545785 sc-eQTL 3.01e-03 0.255 0.085 0.433 CD16_Mono LOneK1K
ENSG00000112299 VNN1 566495 sc-eQTL 7.14e-01 -0.0315 0.086 0.433 CD16_Mono LOneK1K
ENSG00000112303 VNN2 517091 sc-eQTL 6.75e-01 0.034 0.081 0.433 CD16_Mono LOneK1K
ENSG00000112306 RPS12 465981 sc-eQTL 8.87e-01 -0.00489 0.0344 0.433 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 467211 sc-eQTL 3.39e-01 0.0799 0.0833 0.433 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -671620 sc-eQTL 1.29e-02 -0.178 0.071 0.433 NK_CD56dim LOneK1K
ENSG00000079950 STX7 767352 sc-eQTL 3.26e-01 0.0665 0.0676 0.433 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 517091 sc-eQTL 3.57e-01 0.0789 0.0855 0.433 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 465981 sc-eQTL 6.71e-01 0.0149 0.035 0.433 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000093134 VNN3 545785 eQTL 0.0341 0.0313 0.0147 0.0 0.0 0.38
ENSG00000112299 VNN1 566495 pQTL 5.42e-07 -0.178 0.0353 0.0 0.0 0.378
ENSG00000112299 VNN1 566495 eQTL 5.03e-05 -0.0887 0.0218 0.0 0.0 0.38
ENSG00000112303 VNN2 517091 pQTL 0.000224 0.0945 0.0255 0.0 0.0 0.378
ENSG00000112303 VNN2 517091 eQTL 0.042 0.0266 0.0131 0.0 0.0 0.38
ENSG00000146409 SLC18B1 467211 eQTL 0.006 0.0619 0.0225 0.0 0.0 0.38

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina