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Genes within 1Mb (chr6:133247575:T:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -704595 sc-eQTL 5.20e-01 0.056 0.0868 0.404 B L1
ENSG00000079931 MOXD1 846100 sc-eQTL 2.30e-01 0.11 0.0915 0.404 B L1
ENSG00000079950 STX7 734377 sc-eQTL 4.76e-01 -0.0247 0.0346 0.404 B L1
ENSG00000112303 VNN2 484116 sc-eQTL 8.35e-01 0.0136 0.0651 0.404 B L1
ENSG00000112306 RPS12 433006 sc-eQTL 6.01e-01 0.0206 0.0393 0.404 B L1
ENSG00000146409 SLC18B1 434236 sc-eQTL 5.39e-01 -0.0509 0.0828 0.404 B L1
ENSG00000028839 TBPL1 -704595 sc-eQTL 7.42e-01 0.0213 0.0647 0.404 CD4T L1
ENSG00000079950 STX7 734377 sc-eQTL 2.94e-01 -0.0706 0.0671 0.404 CD4T L1
ENSG00000112303 VNN2 484116 sc-eQTL 3.50e-01 0.0544 0.0581 0.404 CD4T L1
ENSG00000112306 RPS12 433006 sc-eQTL 8.82e-01 0.0059 0.0396 0.404 CD4T L1
ENSG00000146409 SLC18B1 434236 sc-eQTL 1.64e-01 -0.111 0.0797 0.404 CD4T L1
ENSG00000028839 TBPL1 -704595 sc-eQTL 2.79e-01 0.069 0.0636 0.404 CD8T L1
ENSG00000079950 STX7 734377 sc-eQTL 2.69e-02 0.147 0.0658 0.404 CD8T L1
ENSG00000112303 VNN2 484116 sc-eQTL 3.37e-01 0.0746 0.0776 0.404 CD8T L1
ENSG00000112306 RPS12 433006 sc-eQTL 1.84e-01 0.0352 0.0265 0.404 CD8T L1
ENSG00000146409 SLC18B1 434236 sc-eQTL 4.21e-01 -0.0647 0.0802 0.404 CD8T L1
ENSG00000028839 TBPL1 -704595 sc-eQTL 9.03e-01 0.0119 0.098 0.403 DC L1
ENSG00000079950 STX7 734377 sc-eQTL 6.78e-01 -0.0253 0.0609 0.403 DC L1
ENSG00000093134 VNN3 512810 sc-eQTL 3.26e-01 0.0742 0.0754 0.403 DC L1
ENSG00000112299 VNN1 533520 sc-eQTL 8.42e-01 -0.0163 0.0815 0.403 DC L1
ENSG00000112303 VNN2 484116 sc-eQTL 3.11e-01 -0.0883 0.087 0.403 DC L1
ENSG00000112306 RPS12 433006 sc-eQTL 7.68e-02 0.0863 0.0485 0.403 DC L1
ENSG00000146409 SLC18B1 434236 sc-eQTL 5.35e-01 -0.0481 0.0773 0.403 DC L1
ENSG00000286438 AL591115.1 144447 sc-eQTL 4.76e-01 0.0502 0.0704 0.403 DC L1
ENSG00000028839 TBPL1 -704595 sc-eQTL 3.35e-01 -0.0666 0.069 0.404 Mono L1
ENSG00000079950 STX7 734377 sc-eQTL 2.48e-01 -0.0534 0.0461 0.404 Mono L1
ENSG00000093134 VNN3 512810 sc-eQTL 4.91e-01 0.0546 0.0793 0.404 Mono L1
ENSG00000112299 VNN1 533520 sc-eQTL 1.28e-02 -0.211 0.0842 0.404 Mono L1
ENSG00000112303 VNN2 484116 sc-eQTL 6.46e-02 0.111 0.0598 0.404 Mono L1
ENSG00000112306 RPS12 433006 sc-eQTL 7.19e-01 -0.013 0.0361 0.404 Mono L1
ENSG00000146409 SLC18B1 434236 sc-eQTL 5.86e-01 -0.039 0.0714 0.404 Mono L1
ENSG00000028839 TBPL1 -704595 sc-eQTL 4.87e-01 -0.0524 0.0752 0.406 NK L1
ENSG00000079950 STX7 734377 sc-eQTL 1.42e-01 0.102 0.0693 0.406 NK L1
ENSG00000112303 VNN2 484116 sc-eQTL 7.43e-01 0.0284 0.0867 0.406 NK L1
ENSG00000112306 RPS12 433006 sc-eQTL 4.60e-01 0.0265 0.0358 0.406 NK L1
ENSG00000028839 TBPL1 -704595 sc-eQTL 9.57e-01 0.00474 0.0874 0.404 Other_T L1
ENSG00000079950 STX7 734377 sc-eQTL 9.73e-01 0.00229 0.0688 0.404 Other_T L1
ENSG00000112303 VNN2 484116 sc-eQTL 6.91e-01 -0.0331 0.0832 0.404 Other_T L1
ENSG00000112306 RPS12 433006 sc-eQTL 4.32e-01 0.0259 0.0329 0.404 Other_T L1
ENSG00000146409 SLC18B1 434236 sc-eQTL 4.24e-01 -0.0723 0.0902 0.404 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -704595 sc-eQTL 9.71e-01 -0.00364 0.101 0.395 B_Activated L2
ENSG00000079931 MOXD1 846100 sc-eQTL 8.81e-01 -0.0138 0.0921 0.395 B_Activated L2
ENSG00000079950 STX7 734377 sc-eQTL 2.69e-01 0.0955 0.0861 0.395 B_Activated L2
ENSG00000112303 VNN2 484116 sc-eQTL 9.55e-01 0.00517 0.0919 0.395 B_Activated L2
ENSG00000112306 RPS12 433006 sc-eQTL 1.67e-01 0.0679 0.049 0.395 B_Activated L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 8.47e-01 -0.0167 0.0863 0.395 B_Activated L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 3.57e-01 -0.089 0.0963 0.403 B_Intermediate L2
ENSG00000079931 MOXD1 846100 sc-eQTL 1.35e-01 0.126 0.0842 0.403 B_Intermediate L2
ENSG00000079950 STX7 734377 sc-eQTL 4.58e-01 0.0411 0.0554 0.403 B_Intermediate L2
ENSG00000112303 VNN2 484116 sc-eQTL 3.78e-01 0.0736 0.0833 0.403 B_Intermediate L2
ENSG00000112306 RPS12 433006 sc-eQTL 9.04e-01 -0.00617 0.0511 0.403 B_Intermediate L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 1.71e-01 -0.126 0.0917 0.403 B_Intermediate L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 3.05e-01 0.0969 0.0942 0.405 B_Memory L2
ENSG00000079931 MOXD1 846100 sc-eQTL 7.85e-01 -0.0238 0.0871 0.405 B_Memory L2
ENSG00000079950 STX7 734377 sc-eQTL 8.21e-01 0.0155 0.0684 0.405 B_Memory L2
ENSG00000112303 VNN2 484116 sc-eQTL 4.20e-01 0.0721 0.0893 0.405 B_Memory L2
ENSG00000112306 RPS12 433006 sc-eQTL 6.57e-01 0.0192 0.0431 0.405 B_Memory L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 3.20e-02 -0.192 0.0889 0.405 B_Memory L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 5.39e-01 0.0528 0.086 0.404 B_Naive1 L2
ENSG00000079931 MOXD1 846100 sc-eQTL 2.30e-01 0.114 0.0943 0.404 B_Naive1 L2
ENSG00000079950 STX7 734377 sc-eQTL 1.86e-01 -0.0547 0.0412 0.404 B_Naive1 L2
ENSG00000112303 VNN2 484116 sc-eQTL 7.31e-01 -0.0277 0.0803 0.404 B_Naive1 L2
ENSG00000112306 RPS12 433006 sc-eQTL 7.65e-01 -0.0137 0.0457 0.404 B_Naive1 L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 8.94e-01 -0.0118 0.0882 0.404 B_Naive1 L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 4.88e-02 0.18 0.0908 0.406 B_Naive2 L2
ENSG00000079931 MOXD1 846100 sc-eQTL 4.21e-01 0.0719 0.0892 0.406 B_Naive2 L2
ENSG00000079950 STX7 734377 sc-eQTL 9.50e-01 -0.00303 0.0487 0.406 B_Naive2 L2
ENSG00000112303 VNN2 484116 sc-eQTL 5.69e-01 0.051 0.0893 0.406 B_Naive2 L2
ENSG00000112306 RPS12 433006 sc-eQTL 8.82e-01 -0.00706 0.0473 0.406 B_Naive2 L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 2.06e-01 0.114 0.0899 0.406 B_Naive2 L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 6.80e-01 -0.0388 0.094 0.409 CD4_CTL L2
ENSG00000079950 STX7 734377 sc-eQTL 2.92e-01 -0.0983 0.0931 0.409 CD4_CTL L2
ENSG00000112303 VNN2 484116 sc-eQTL 7.34e-01 0.0321 0.0942 0.409 CD4_CTL L2
ENSG00000112306 RPS12 433006 sc-eQTL 5.02e-01 0.0293 0.0435 0.409 CD4_CTL L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 5.15e-01 0.0571 0.0877 0.409 CD4_CTL L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 6.36e-02 0.137 0.0733 0.404 CD4_Naive L2
ENSG00000079950 STX7 734377 sc-eQTL 9.72e-02 -0.12 0.072 0.404 CD4_Naive L2
ENSG00000112303 VNN2 484116 sc-eQTL 6.08e-01 0.0345 0.0671 0.404 CD4_Naive L2
ENSG00000112306 RPS12 433006 sc-eQTL 5.99e-01 -0.0229 0.0435 0.404 CD4_Naive L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 3.59e-01 -0.0769 0.0837 0.404 CD4_Naive L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 5.29e-01 -0.05 0.0793 0.404 CD4_TCM L2
ENSG00000079950 STX7 734377 sc-eQTL 7.08e-01 0.03 0.0799 0.404 CD4_TCM L2
ENSG00000112303 VNN2 484116 sc-eQTL 1.79e-01 0.106 0.0785 0.404 CD4_TCM L2
ENSG00000112306 RPS12 433006 sc-eQTL 1.05e-01 0.0661 0.0406 0.404 CD4_TCM L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 1.93e-01 -0.123 0.0942 0.404 CD4_TCM L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 7.70e-01 0.0274 0.0933 0.404 CD4_TEM L2
ENSG00000079950 STX7 734377 sc-eQTL 2.50e-01 0.107 0.0931 0.404 CD4_TEM L2
ENSG00000112303 VNN2 484116 sc-eQTL 9.02e-01 0.0111 0.0896 0.404 CD4_TEM L2
ENSG00000112306 RPS12 433006 sc-eQTL 8.81e-01 -0.00551 0.0368 0.404 CD4_TEM L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 8.00e-01 -0.0232 0.0914 0.404 CD4_TEM L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 5.08e-01 0.0538 0.0812 0.404 CD8_CTL L2
ENSG00000079950 STX7 734377 sc-eQTL 5.56e-03 0.209 0.0746 0.404 CD8_CTL L2
ENSG00000112303 VNN2 484116 sc-eQTL 8.06e-01 0.0212 0.0863 0.404 CD8_CTL L2
ENSG00000112306 RPS12 433006 sc-eQTL 7.07e-01 -0.0174 0.0462 0.404 CD8_CTL L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 8.39e-01 -0.0182 0.0895 0.404 CD8_CTL L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 8.83e-01 -0.0127 0.0865 0.404 CD8_Naive L2
ENSG00000079950 STX7 734377 sc-eQTL 1.68e-01 0.127 0.0918 0.404 CD8_Naive L2
ENSG00000112303 VNN2 484116 sc-eQTL 1.86e-01 0.105 0.0792 0.404 CD8_Naive L2
ENSG00000112306 RPS12 433006 sc-eQTL 9.72e-01 0.0016 0.0456 0.404 CD8_Naive L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 7.20e-01 -0.0329 0.0914 0.404 CD8_Naive L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 2.20e-01 -0.124 0.101 0.417 CD8_TCM L2
ENSG00000079950 STX7 734377 sc-eQTL 2.26e-01 0.113 0.0934 0.417 CD8_TCM L2
ENSG00000112303 VNN2 484116 sc-eQTL 8.06e-01 -0.0229 0.093 0.417 CD8_TCM L2
ENSG00000112306 RPS12 433006 sc-eQTL 8.62e-01 -0.00788 0.0453 0.417 CD8_TCM L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 2.26e-01 0.12 0.099 0.417 CD8_TCM L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 4.61e-02 -0.178 0.0885 0.395 CD8_TEM L2
ENSG00000079950 STX7 734377 sc-eQTL 4.74e-01 -0.0699 0.0974 0.395 CD8_TEM L2
ENSG00000112303 VNN2 484116 sc-eQTL 1.87e-01 -0.128 0.0966 0.395 CD8_TEM L2
ENSG00000112306 RPS12 433006 sc-eQTL 9.75e-01 0.00162 0.0522 0.395 CD8_TEM L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 6.15e-01 -0.0497 0.0986 0.395 CD8_TEM L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 3.73e-01 -0.0828 0.0927 0.405 MAIT L2
ENSG00000079950 STX7 734377 sc-eQTL 2.40e-01 -0.104 0.088 0.405 MAIT L2
ENSG00000112303 VNN2 484116 sc-eQTL 5.35e-01 -0.0557 0.0897 0.405 MAIT L2
ENSG00000112306 RPS12 433006 sc-eQTL 4.91e-01 0.0304 0.0441 0.405 MAIT L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 4.36e-01 -0.0721 0.0924 0.405 MAIT L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 6.17e-01 0.0502 0.1 0.404 NK_CD56bright L2
ENSG00000079950 STX7 734377 sc-eQTL 8.66e-01 -0.0157 0.0929 0.404 NK_CD56bright L2
ENSG00000112303 VNN2 484116 sc-eQTL 7.26e-01 0.0331 0.0943 0.404 NK_CD56bright L2
ENSG00000112306 RPS12 433006 sc-eQTL 9.93e-02 0.0865 0.0522 0.404 NK_CD56bright L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 3.13e-01 -0.0825 0.0815 0.407 NK_CD56dim L2
ENSG00000079950 STX7 734377 sc-eQTL 3.21e-01 0.0742 0.0746 0.407 NK_CD56dim L2
ENSG00000112303 VNN2 484116 sc-eQTL 7.11e-01 0.0346 0.0935 0.407 NK_CD56dim L2
ENSG00000112306 RPS12 433006 sc-eQTL 9.39e-01 0.00282 0.0371 0.407 NK_CD56dim L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 4.72e-01 0.0719 0.0998 0.402 NK_HLA L2
ENSG00000079950 STX7 734377 sc-eQTL 1.98e-01 0.117 0.0906 0.402 NK_HLA L2
ENSG00000112303 VNN2 484116 sc-eQTL 4.28e-01 -0.0731 0.0919 0.402 NK_HLA L2
ENSG00000112306 RPS12 433006 sc-eQTL 1.76e-01 0.0579 0.0427 0.402 NK_HLA L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 3.56e-01 -0.0773 0.0835 0.407 NK_cytokine L2
ENSG00000079950 STX7 734377 sc-eQTL 5.45e-01 0.0492 0.081 0.407 NK_cytokine L2
ENSG00000112303 VNN2 484116 sc-eQTL 9.66e-01 0.00394 0.0911 0.407 NK_cytokine L2
ENSG00000112306 RPS12 433006 sc-eQTL 2.22e-01 0.0604 0.0493 0.407 NK_cytokine L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 9.62e-01 -0.00538 0.113 0.411 PB L2
ENSG00000079931 MOXD1 846100 sc-eQTL 6.76e-01 0.0404 0.0963 0.411 PB L2
ENSG00000079950 STX7 734377 sc-eQTL 1.82e-01 0.107 0.0798 0.411 PB L2
ENSG00000112303 VNN2 484116 sc-eQTL 4.85e-01 0.0687 0.0981 0.411 PB L2
ENSG00000112306 RPS12 433006 sc-eQTL 8.57e-01 0.0101 0.0558 0.411 PB L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 8.32e-01 0.0222 0.105 0.411 PB L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 7.31e-01 0.0324 0.0939 0.4 Pro_T L2
ENSG00000079950 STX7 734377 sc-eQTL 3.53e-01 0.0779 0.0837 0.4 Pro_T L2
ENSG00000112303 VNN2 484116 sc-eQTL 6.19e-01 0.0448 0.0899 0.4 Pro_T L2
ENSG00000112306 RPS12 433006 sc-eQTL 8.91e-01 -0.00468 0.034 0.4 Pro_T L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 7.74e-01 -0.0253 0.0881 0.4 Pro_T L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 2.44e-01 -0.112 0.0962 0.404 Treg L2
ENSG00000079950 STX7 734377 sc-eQTL 2.44e-01 -0.106 0.0907 0.404 Treg L2
ENSG00000112303 VNN2 484116 sc-eQTL 5.34e-01 0.0477 0.0765 0.404 Treg L2
ENSG00000112306 RPS12 433006 sc-eQTL 3.65e-01 0.0307 0.0338 0.404 Treg L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 3.55e-01 -0.0885 0.0954 0.404 Treg L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 3.86e-01 0.0852 0.098 0.405 cDC L2
ENSG00000079950 STX7 734377 sc-eQTL 4.96e-01 -0.0525 0.077 0.405 cDC L2
ENSG00000093134 VNN3 512810 sc-eQTL 3.53e-01 0.0711 0.0764 0.405 cDC L2
ENSG00000112299 VNN1 533520 sc-eQTL 7.56e-01 -0.028 0.09 0.405 cDC L2
ENSG00000112303 VNN2 484116 sc-eQTL 2.91e-01 -0.0926 0.0874 0.405 cDC L2
ENSG00000112306 RPS12 433006 sc-eQTL 3.66e-01 0.0392 0.0432 0.405 cDC L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 6.73e-01 0.0363 0.0857 0.405 cDC L2
ENSG00000286438 AL591115.1 144447 sc-eQTL 5.22e-01 0.044 0.0685 0.405 cDC L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 1.04e-01 -0.127 0.0778 0.404 cMono_IL1B L2
ENSG00000079950 STX7 734377 sc-eQTL 8.25e-01 -0.0132 0.0594 0.404 cMono_IL1B L2
ENSG00000093134 VNN3 512810 sc-eQTL 7.27e-01 0.0293 0.084 0.404 cMono_IL1B L2
ENSG00000112299 VNN1 533520 sc-eQTL 5.84e-02 -0.16 0.084 0.404 cMono_IL1B L2
ENSG00000112303 VNN2 484116 sc-eQTL 2.68e-01 0.0751 0.0676 0.404 cMono_IL1B L2
ENSG00000112306 RPS12 433006 sc-eQTL 7.75e-01 -0.0108 0.0376 0.404 cMono_IL1B L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 1.58e-01 -0.102 0.0723 0.404 cMono_IL1B L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 6.44e-01 0.0415 0.0897 0.404 cMono_S100A L2
ENSG00000079950 STX7 734377 sc-eQTL 6.73e-02 -0.118 0.0643 0.404 cMono_S100A L2
ENSG00000093134 VNN3 512810 sc-eQTL 8.20e-01 0.0185 0.081 0.404 cMono_S100A L2
ENSG00000112299 VNN1 533520 sc-eQTL 1.79e-02 -0.207 0.0868 0.404 cMono_S100A L2
ENSG00000112303 VNN2 484116 sc-eQTL 1.23e-01 0.0886 0.0573 0.404 cMono_S100A L2
ENSG00000112306 RPS12 433006 sc-eQTL 5.31e-01 -0.026 0.0414 0.404 cMono_S100A L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 4.66e-01 0.056 0.0767 0.404 cMono_S100A L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 6.24e-01 -0.0609 0.124 0.397 gdT L2
ENSG00000079950 STX7 734377 sc-eQTL 3.44e-01 -0.101 0.106 0.397 gdT L2
ENSG00000112303 VNN2 484116 sc-eQTL 3.13e-01 -0.119 0.118 0.397 gdT L2
ENSG00000112306 RPS12 433006 sc-eQTL 9.47e-01 0.00298 0.045 0.397 gdT L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 1.72e-01 0.159 0.115 0.397 gdT L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 3.65e-01 0.0845 0.093 0.409 intMono L2
ENSG00000079950 STX7 734377 sc-eQTL 1.58e-01 -0.126 0.0886 0.409 intMono L2
ENSG00000093134 VNN3 512810 sc-eQTL 1.96e-02 0.209 0.0886 0.409 intMono L2
ENSG00000112299 VNN1 533520 sc-eQTL 1.11e-02 -0.224 0.0874 0.409 intMono L2
ENSG00000112303 VNN2 484116 sc-eQTL 4.38e-01 -0.0701 0.0901 0.409 intMono L2
ENSG00000112306 RPS12 433006 sc-eQTL 7.99e-01 0.01 0.0393 0.409 intMono L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 6.70e-01 0.0408 0.0956 0.409 intMono L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 9.97e-01 -0.000407 0.0977 0.407 ncMono L2
ENSG00000079950 STX7 734377 sc-eQTL 5.00e-01 0.0446 0.066 0.407 ncMono L2
ENSG00000093134 VNN3 512810 sc-eQTL 4.66e-01 0.0681 0.0931 0.407 ncMono L2
ENSG00000112299 VNN1 533520 sc-eQTL 1.24e-01 -0.142 0.092 0.407 ncMono L2
ENSG00000112303 VNN2 484116 sc-eQTL 3.53e-01 0.0826 0.0888 0.407 ncMono L2
ENSG00000112306 RPS12 433006 sc-eQTL 7.01e-01 0.0172 0.0446 0.407 ncMono L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 3.62e-01 0.0718 0.0786 0.407 ncMono L2
ENSG00000028839 TBPL1 -704595 sc-eQTL 6.07e-01 -0.0582 0.113 0.41 pDC L2
ENSG00000079950 STX7 734377 sc-eQTL 7.19e-01 0.0271 0.0752 0.41 pDC L2
ENSG00000093134 VNN3 512810 sc-eQTL 9.33e-01 0.00637 0.0757 0.41 pDC L2
ENSG00000112299 VNN1 533520 sc-eQTL 8.86e-01 -0.0111 0.077 0.41 pDC L2
ENSG00000112303 VNN2 484116 sc-eQTL 6.82e-01 0.0376 0.0917 0.41 pDC L2
ENSG00000112306 RPS12 433006 sc-eQTL 7.76e-02 0.111 0.0625 0.41 pDC L2
ENSG00000146409 SLC18B1 434236 sc-eQTL 7.03e-01 -0.0357 0.0935 0.41 pDC L2
ENSG00000286438 AL591115.1 144447 sc-eQTL 2.58e-01 0.101 0.0891 0.41 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -704595 sc-eQTL 4.78e-01 -0.0664 0.0935 0.404 B_Memory LOneK1K
ENSG00000079931 MOXD1 846100 sc-eQTL 3.36e-01 0.0876 0.0907 0.404 B_Memory LOneK1K
ENSG00000079950 STX7 734377 sc-eQTL 6.29e-01 0.0249 0.0515 0.404 B_Memory LOneK1K
ENSG00000112303 VNN2 484116 sc-eQTL 4.65e-01 0.0596 0.0814 0.404 B_Memory LOneK1K
ENSG00000112306 RPS12 433006 sc-eQTL 9.84e-01 -0.000944 0.0464 0.404 B_Memory LOneK1K
ENSG00000146409 SLC18B1 434236 sc-eQTL 1.12e-01 -0.135 0.0847 0.404 B_Memory LOneK1K
ENSG00000028839 TBPL1 -704595 sc-eQTL 7.46e-02 0.153 0.0855 0.404 B_Naive LOneK1K
ENSG00000079931 MOXD1 846100 sc-eQTL 1.88e-01 0.124 0.0942 0.404 B_Naive LOneK1K
ENSG00000079950 STX7 734377 sc-eQTL 2.35e-01 -0.0461 0.0387 0.404 B_Naive LOneK1K
ENSG00000112303 VNN2 484116 sc-eQTL 8.60e-01 0.0133 0.0754 0.404 B_Naive LOneK1K
ENSG00000112306 RPS12 433006 sc-eQTL 8.79e-01 -0.00696 0.0456 0.404 B_Naive LOneK1K
ENSG00000146409 SLC18B1 434236 sc-eQTL 4.26e-01 0.0686 0.0859 0.404 B_Naive LOneK1K
ENSG00000028839 TBPL1 -704595 sc-eQTL 3.83e-01 -0.0623 0.0712 0.404 CD14_Mono LOneK1K
ENSG00000079950 STX7 734377 sc-eQTL 1.77e-01 -0.0669 0.0494 0.404 CD14_Mono LOneK1K
ENSG00000093134 VNN3 512810 sc-eQTL 6.53e-01 0.0364 0.0809 0.404 CD14_Mono LOneK1K
ENSG00000112299 VNN1 533520 sc-eQTL 1.28e-02 -0.209 0.0831 0.404 CD14_Mono LOneK1K
ENSG00000112303 VNN2 484116 sc-eQTL 1.78e-01 0.075 0.0555 0.404 CD14_Mono LOneK1K
ENSG00000112306 RPS12 433006 sc-eQTL 8.78e-01 -0.00586 0.0382 0.404 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 434236 sc-eQTL 3.85e-01 -0.0591 0.0679 0.404 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -704595 sc-eQTL 7.44e-01 0.0308 0.0942 0.405 CD16_Mono LOneK1K
ENSG00000079950 STX7 734377 sc-eQTL 7.80e-01 -0.0174 0.0621 0.405 CD16_Mono LOneK1K
ENSG00000093134 VNN3 512810 sc-eQTL 1.78e-02 0.216 0.0902 0.405 CD16_Mono LOneK1K
ENSG00000112299 VNN1 533520 sc-eQTL 1.62e-01 -0.127 0.0902 0.405 CD16_Mono LOneK1K
ENSG00000112303 VNN2 484116 sc-eQTL 6.39e-01 0.0401 0.0854 0.405 CD16_Mono LOneK1K
ENSG00000112306 RPS12 433006 sc-eQTL 6.28e-01 -0.0176 0.0362 0.405 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 434236 sc-eQTL 5.66e-01 0.0505 0.0879 0.405 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -704595 sc-eQTL 2.49e-01 -0.0859 0.0743 0.407 NK_CD56dim LOneK1K
ENSG00000079950 STX7 734377 sc-eQTL 1.58e-01 0.0988 0.0697 0.407 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 484116 sc-eQTL 7.38e-01 0.0297 0.0887 0.407 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 433006 sc-eQTL 4.98e-01 0.0246 0.0362 0.407 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 533520 pQTL 0.000146 -0.136 0.0357 0.0 0.0 0.355
ENSG00000112299 VNN1 533520 eQTL 0.00798 -0.0588 0.0221 0.0 0.0 0.355
ENSG00000112303 VNN2 484116 pQTL 0.0239 0.0583 0.0258 0.0 0.0 0.355

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina