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Genes within 1Mb (chr6:133235429:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -716741 sc-eQTL 4.71e-01 0.0631 0.0874 0.389 B L1
ENSG00000079931 MOXD1 833954 sc-eQTL 5.61e-01 0.0538 0.0924 0.389 B L1
ENSG00000079950 STX7 722231 sc-eQTL 5.94e-01 -0.0186 0.0348 0.389 B L1
ENSG00000112303 VNN2 471970 sc-eQTL 9.62e-01 0.00317 0.0655 0.389 B L1
ENSG00000112306 RPS12 420860 sc-eQTL 7.49e-01 0.0127 0.0396 0.389 B L1
ENSG00000146409 SLC18B1 422090 sc-eQTL 6.74e-01 -0.0351 0.0834 0.389 B L1
ENSG00000028839 TBPL1 -716741 sc-eQTL 7.42e-01 0.0215 0.0652 0.389 CD4T L1
ENSG00000079950 STX7 722231 sc-eQTL 4.46e-01 -0.0517 0.0677 0.389 CD4T L1
ENSG00000112303 VNN2 471970 sc-eQTL 4.13e-01 0.0481 0.0587 0.389 CD4T L1
ENSG00000112306 RPS12 420860 sc-eQTL 8.77e-01 0.00618 0.0399 0.389 CD4T L1
ENSG00000146409 SLC18B1 422090 sc-eQTL 3.16e-01 -0.081 0.0806 0.389 CD4T L1
ENSG00000028839 TBPL1 -716741 sc-eQTL 3.07e-01 0.0656 0.0641 0.389 CD8T L1
ENSG00000079950 STX7 722231 sc-eQTL 4.16e-02 0.136 0.0664 0.389 CD8T L1
ENSG00000112303 VNN2 471970 sc-eQTL 2.48e-01 0.0904 0.0781 0.389 CD8T L1
ENSG00000112306 RPS12 420860 sc-eQTL 2.04e-01 0.034 0.0267 0.389 CD8T L1
ENSG00000146409 SLC18B1 422090 sc-eQTL 5.38e-01 -0.0499 0.0809 0.389 CD8T L1
ENSG00000028839 TBPL1 -716741 sc-eQTL 6.84e-01 -0.0402 0.0985 0.387 DC L1
ENSG00000079950 STX7 722231 sc-eQTL 6.25e-01 -0.0299 0.0612 0.387 DC L1
ENSG00000093134 VNN3 500664 sc-eQTL 3.65e-01 0.0688 0.0758 0.387 DC L1
ENSG00000112299 VNN1 521374 sc-eQTL 9.51e-01 0.00505 0.082 0.387 DC L1
ENSG00000112303 VNN2 471970 sc-eQTL 3.68e-01 -0.0789 0.0875 0.387 DC L1
ENSG00000112306 RPS12 420860 sc-eQTL 3.52e-02 0.103 0.0486 0.387 DC L1
ENSG00000146409 SLC18B1 422090 sc-eQTL 4.49e-01 -0.0589 0.0777 0.387 DC L1
ENSG00000286438 AL591115.1 132301 sc-eQTL 4.69e-01 0.0513 0.0707 0.387 DC L1
ENSG00000028839 TBPL1 -716741 sc-eQTL 3.34e-01 -0.0668 0.069 0.389 Mono L1
ENSG00000079950 STX7 722231 sc-eQTL 3.56e-01 -0.0427 0.0462 0.389 Mono L1
ENSG00000093134 VNN3 500664 sc-eQTL 5.95e-01 0.0423 0.0794 0.389 Mono L1
ENSG00000112299 VNN1 521374 sc-eQTL 8.49e-02 -0.147 0.0848 0.389 Mono L1
ENSG00000112303 VNN2 471970 sc-eQTL 4.41e-02 0.121 0.0597 0.389 Mono L1
ENSG00000112306 RPS12 420860 sc-eQTL 7.93e-01 -0.00948 0.0361 0.389 Mono L1
ENSG00000146409 SLC18B1 422090 sc-eQTL 4.85e-01 -0.0499 0.0714 0.389 Mono L1
ENSG00000028839 TBPL1 -716741 sc-eQTL 5.04e-01 -0.0505 0.0755 0.391 NK L1
ENSG00000079950 STX7 722231 sc-eQTL 1.47e-01 0.101 0.0695 0.391 NK L1
ENSG00000112303 VNN2 471970 sc-eQTL 9.36e-01 -0.007 0.087 0.391 NK L1
ENSG00000112306 RPS12 420860 sc-eQTL 6.97e-01 0.014 0.036 0.391 NK L1
ENSG00000028839 TBPL1 -716741 sc-eQTL 7.40e-01 0.0291 0.0878 0.389 Other_T L1
ENSG00000079950 STX7 722231 sc-eQTL 6.90e-01 0.0276 0.0691 0.389 Other_T L1
ENSG00000112303 VNN2 471970 sc-eQTL 9.65e-01 -0.00365 0.0836 0.389 Other_T L1
ENSG00000112306 RPS12 420860 sc-eQTL 4.85e-01 0.0231 0.0331 0.389 Other_T L1
ENSG00000146409 SLC18B1 422090 sc-eQTL 9.74e-01 -0.00301 0.0907 0.389 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -716741 sc-eQTL 8.58e-01 -0.0184 0.102 0.38 B_Activated L2
ENSG00000079931 MOXD1 833954 sc-eQTL 9.95e-01 0.000615 0.0933 0.38 B_Activated L2
ENSG00000079950 STX7 722231 sc-eQTL 2.17e-01 0.108 0.0871 0.38 B_Activated L2
ENSG00000112303 VNN2 471970 sc-eQTL 8.23e-01 0.0208 0.0931 0.38 B_Activated L2
ENSG00000112306 RPS12 420860 sc-eQTL 2.22e-01 0.0609 0.0497 0.38 B_Activated L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 8.67e-01 -0.0147 0.0874 0.38 B_Activated L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 1.97e-01 -0.125 0.0967 0.388 B_Intermediate L2
ENSG00000079931 MOXD1 833954 sc-eQTL 3.44e-01 0.0806 0.0851 0.388 B_Intermediate L2
ENSG00000079950 STX7 722231 sc-eQTL 5.36e-01 0.0345 0.0557 0.388 B_Intermediate L2
ENSG00000112303 VNN2 471970 sc-eQTL 5.09e-01 0.0556 0.0839 0.388 B_Intermediate L2
ENSG00000112306 RPS12 420860 sc-eQTL 7.37e-01 -0.0173 0.0514 0.388 B_Intermediate L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 2.69e-01 -0.102 0.0924 0.388 B_Intermediate L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 3.69e-01 0.0857 0.0952 0.39 B_Memory L2
ENSG00000079931 MOXD1 833954 sc-eQTL 8.82e-01 -0.0131 0.088 0.39 B_Memory L2
ENSG00000079950 STX7 722231 sc-eQTL 8.67e-01 -0.0115 0.069 0.39 B_Memory L2
ENSG00000112303 VNN2 471970 sc-eQTL 2.86e-01 0.0963 0.0901 0.39 B_Memory L2
ENSG00000112306 RPS12 420860 sc-eQTL 5.99e-01 0.0229 0.0435 0.39 B_Memory L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 6.59e-02 -0.167 0.0901 0.39 B_Memory L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 6.04e-01 0.0449 0.0864 0.389 B_Naive1 L2
ENSG00000079931 MOXD1 833954 sc-eQTL 3.71e-01 0.0851 0.0949 0.389 B_Naive1 L2
ENSG00000079950 STX7 722231 sc-eQTL 3.30e-01 -0.0405 0.0415 0.389 B_Naive1 L2
ENSG00000112303 VNN2 471970 sc-eQTL 5.09e-01 -0.0534 0.0806 0.389 B_Naive1 L2
ENSG00000112306 RPS12 420860 sc-eQTL 6.03e-01 -0.0239 0.0459 0.389 B_Naive1 L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 7.49e-01 0.0284 0.0887 0.389 B_Naive1 L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 2.16e-02 0.211 0.0913 0.391 B_Naive2 L2
ENSG00000079931 MOXD1 833954 sc-eQTL 7.74e-01 0.026 0.0901 0.391 B_Naive2 L2
ENSG00000079950 STX7 722231 sc-eQTL 7.13e-01 0.0181 0.0491 0.391 B_Naive2 L2
ENSG00000112303 VNN2 471970 sc-eQTL 6.76e-01 0.0377 0.0901 0.391 B_Naive2 L2
ENSG00000112306 RPS12 420860 sc-eQTL 6.26e-01 -0.0233 0.0477 0.391 B_Naive2 L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 2.85e-01 0.0973 0.0908 0.391 B_Naive2 L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 7.14e-01 -0.0346 0.0941 0.393 CD4_CTL L2
ENSG00000079950 STX7 722231 sc-eQTL 7.24e-01 -0.0331 0.0935 0.393 CD4_CTL L2
ENSG00000112303 VNN2 471970 sc-eQTL 6.20e-01 0.0468 0.0943 0.393 CD4_CTL L2
ENSG00000112306 RPS12 420860 sc-eQTL 5.66e-01 0.0251 0.0436 0.393 CD4_CTL L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 4.91e-01 0.0606 0.0878 0.393 CD4_CTL L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 6.58e-02 0.137 0.0741 0.389 CD4_Naive L2
ENSG00000079950 STX7 722231 sc-eQTL 1.01e-01 -0.12 0.0728 0.389 CD4_Naive L2
ENSG00000112303 VNN2 471970 sc-eQTL 6.51e-01 0.0307 0.0678 0.389 CD4_Naive L2
ENSG00000112306 RPS12 420860 sc-eQTL 6.87e-01 -0.0178 0.044 0.389 CD4_Naive L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 4.19e-01 -0.0686 0.0846 0.389 CD4_Naive L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 7.34e-01 -0.0272 0.0798 0.389 CD4_TCM L2
ENSG00000079950 STX7 722231 sc-eQTL 3.65e-01 0.0728 0.0802 0.389 CD4_TCM L2
ENSG00000112303 VNN2 471970 sc-eQTL 2.05e-01 0.1 0.0789 0.389 CD4_TCM L2
ENSG00000112306 RPS12 420860 sc-eQTL 7.80e-02 0.0722 0.0407 0.389 CD4_TCM L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 4.50e-01 -0.0719 0.0949 0.389 CD4_TCM L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 9.42e-01 -0.00682 0.0937 0.389 CD4_TEM L2
ENSG00000079950 STX7 722231 sc-eQTL 1.91e-01 0.123 0.0934 0.389 CD4_TEM L2
ENSG00000112303 VNN2 471970 sc-eQTL 8.32e-01 -0.0192 0.09 0.389 CD4_TEM L2
ENSG00000112306 RPS12 420860 sc-eQTL 7.84e-01 -0.0101 0.0369 0.389 CD4_TEM L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 7.52e-01 -0.029 0.0917 0.389 CD4_TEM L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 6.15e-01 0.0412 0.0819 0.389 CD8_CTL L2
ENSG00000079950 STX7 722231 sc-eQTL 6.24e-03 0.208 0.0752 0.389 CD8_CTL L2
ENSG00000112303 VNN2 471970 sc-eQTL 5.71e-01 0.0493 0.0869 0.389 CD8_CTL L2
ENSG00000112306 RPS12 420860 sc-eQTL 5.08e-01 -0.0309 0.0465 0.389 CD8_CTL L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 7.99e-01 0.0229 0.0902 0.389 CD8_CTL L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 9.54e-01 0.00504 0.0874 0.389 CD8_Naive L2
ENSG00000079950 STX7 722231 sc-eQTL 3.01e-01 0.0962 0.0929 0.389 CD8_Naive L2
ENSG00000112303 VNN2 471970 sc-eQTL 2.56e-01 0.0912 0.0801 0.389 CD8_Naive L2
ENSG00000112306 RPS12 420860 sc-eQTL 8.17e-01 0.0107 0.046 0.389 CD8_Naive L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 7.74e-01 -0.0265 0.0923 0.389 CD8_Naive L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 2.59e-01 -0.113 0.1 0.403 CD8_TCM L2
ENSG00000079950 STX7 722231 sc-eQTL 2.14e-01 0.115 0.0926 0.403 CD8_TCM L2
ENSG00000112303 VNN2 471970 sc-eQTL 7.90e-01 -0.0246 0.0922 0.403 CD8_TCM L2
ENSG00000112306 RPS12 420860 sc-eQTL 6.60e-01 -0.0198 0.0449 0.403 CD8_TCM L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 1.03e-01 0.16 0.0978 0.403 CD8_TCM L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 6.78e-02 -0.164 0.0891 0.379 CD8_TEM L2
ENSG00000079950 STX7 722231 sc-eQTL 4.52e-01 -0.0737 0.0979 0.379 CD8_TEM L2
ENSG00000112303 VNN2 471970 sc-eQTL 3.50e-01 -0.091 0.0973 0.379 CD8_TEM L2
ENSG00000112306 RPS12 420860 sc-eQTL 9.63e-01 -0.00244 0.0524 0.379 CD8_TEM L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 7.10e-01 -0.0369 0.0991 0.379 CD8_TEM L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 6.47e-01 -0.0429 0.0936 0.39 MAIT L2
ENSG00000079950 STX7 722231 sc-eQTL 4.90e-01 -0.0614 0.0889 0.39 MAIT L2
ENSG00000112303 VNN2 471970 sc-eQTL 8.15e-01 -0.0212 0.0905 0.39 MAIT L2
ENSG00000112306 RPS12 420860 sc-eQTL 5.14e-01 0.0291 0.0445 0.39 MAIT L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 9.37e-01 -0.00739 0.0933 0.39 MAIT L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 6.47e-01 0.0459 0.0999 0.391 NK_CD56bright L2
ENSG00000079950 STX7 722231 sc-eQTL 8.62e-01 -0.0161 0.0926 0.391 NK_CD56bright L2
ENSG00000112303 VNN2 471970 sc-eQTL 8.05e-01 0.0232 0.094 0.391 NK_CD56bright L2
ENSG00000112306 RPS12 420860 sc-eQTL 1.34e-01 0.0784 0.0521 0.391 NK_CD56bright L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 2.86e-01 -0.0869 0.0813 0.392 NK_CD56dim L2
ENSG00000079950 STX7 722231 sc-eQTL 4.29e-01 0.059 0.0745 0.392 NK_CD56dim L2
ENSG00000112303 VNN2 471970 sc-eQTL 9.83e-01 0.00198 0.0933 0.392 NK_CD56dim L2
ENSG00000112306 RPS12 420860 sc-eQTL 9.67e-01 -0.00152 0.037 0.392 NK_CD56dim L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 2.65e-01 0.113 0.101 0.386 NK_HLA L2
ENSG00000079950 STX7 722231 sc-eQTL 1.49e-01 0.133 0.0914 0.386 NK_HLA L2
ENSG00000112303 VNN2 471970 sc-eQTL 3.07e-01 -0.095 0.0928 0.386 NK_HLA L2
ENSG00000112306 RPS12 420860 sc-eQTL 3.90e-01 0.0373 0.0432 0.386 NK_HLA L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 5.39e-01 -0.0517 0.084 0.392 NK_cytokine L2
ENSG00000079950 STX7 722231 sc-eQTL 4.38e-01 0.0632 0.0813 0.392 NK_cytokine L2
ENSG00000112303 VNN2 471970 sc-eQTL 9.55e-01 -0.00518 0.0916 0.392 NK_cytokine L2
ENSG00000112306 RPS12 420860 sc-eQTL 3.35e-01 0.0479 0.0496 0.392 NK_cytokine L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 9.34e-01 0.00939 0.113 0.396 PB L2
ENSG00000079931 MOXD1 833954 sc-eQTL 5.66e-01 0.0555 0.0965 0.396 PB L2
ENSG00000079950 STX7 722231 sc-eQTL 2.02e-01 0.103 0.0801 0.396 PB L2
ENSG00000112303 VNN2 471970 sc-eQTL 8.79e-01 0.015 0.0986 0.396 PB L2
ENSG00000112306 RPS12 420860 sc-eQTL 8.61e-01 0.00981 0.056 0.396 PB L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 7.12e-01 0.0388 0.105 0.396 PB L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 5.78e-01 0.0521 0.0936 0.387 Pro_T L2
ENSG00000079950 STX7 722231 sc-eQTL 2.65e-01 0.0932 0.0834 0.387 Pro_T L2
ENSG00000112303 VNN2 471970 sc-eQTL 4.31e-01 0.0707 0.0896 0.387 Pro_T L2
ENSG00000112306 RPS12 420860 sc-eQTL 8.10e-01 -0.00817 0.0339 0.387 Pro_T L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 8.50e-01 -0.0166 0.0878 0.387 Pro_T L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 3.91e-01 -0.0831 0.0968 0.389 Treg L2
ENSG00000079950 STX7 722231 sc-eQTL 2.32e-01 -0.109 0.0911 0.389 Treg L2
ENSG00000112303 VNN2 471970 sc-eQTL 5.74e-01 0.0433 0.0768 0.389 Treg L2
ENSG00000112306 RPS12 420860 sc-eQTL 3.58e-01 0.0313 0.034 0.389 Treg L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 3.17e-01 -0.0962 0.0959 0.389 Treg L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 6.77e-01 0.0412 0.0988 0.388 cDC L2
ENSG00000079950 STX7 722231 sc-eQTL 4.25e-01 -0.0619 0.0775 0.388 cDC L2
ENSG00000093134 VNN3 500664 sc-eQTL 4.64e-01 0.0565 0.077 0.388 cDC L2
ENSG00000112299 VNN1 521374 sc-eQTL 9.77e-01 -0.00258 0.0906 0.388 cDC L2
ENSG00000112303 VNN2 471970 sc-eQTL 3.00e-01 -0.0914 0.088 0.388 cDC L2
ENSG00000112306 RPS12 420860 sc-eQTL 1.35e-01 0.065 0.0433 0.388 cDC L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 7.88e-01 0.0232 0.0863 0.388 cDC L2
ENSG00000286438 AL591115.1 132301 sc-eQTL 5.07e-01 0.0458 0.0689 0.388 cDC L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 9.77e-02 -0.129 0.0778 0.389 cMono_IL1B L2
ENSG00000079950 STX7 722231 sc-eQTL 9.62e-01 -0.00286 0.0595 0.389 cMono_IL1B L2
ENSG00000093134 VNN3 500664 sc-eQTL 8.01e-01 0.0212 0.084 0.389 cMono_IL1B L2
ENSG00000112299 VNN1 521374 sc-eQTL 2.22e-01 -0.103 0.0845 0.389 cMono_IL1B L2
ENSG00000112303 VNN2 471970 sc-eQTL 1.44e-01 0.0989 0.0675 0.389 cMono_IL1B L2
ENSG00000112306 RPS12 420860 sc-eQTL 9.49e-01 -0.00243 0.0376 0.389 cMono_IL1B L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 2.02e-01 -0.0926 0.0723 0.389 cMono_IL1B L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 4.29e-01 0.0712 0.0898 0.389 cMono_S100A L2
ENSG00000079950 STX7 722231 sc-eQTL 7.85e-02 -0.114 0.0645 0.389 cMono_S100A L2
ENSG00000093134 VNN3 500664 sc-eQTL 9.75e-01 0.00252 0.0812 0.389 cMono_S100A L2
ENSG00000112299 VNN1 521374 sc-eQTL 7.12e-02 -0.159 0.0874 0.389 cMono_S100A L2
ENSG00000112303 VNN2 471970 sc-eQTL 1.36e-01 0.086 0.0574 0.389 cMono_S100A L2
ENSG00000112306 RPS12 420860 sc-eQTL 5.16e-01 -0.027 0.0415 0.389 cMono_S100A L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 8.33e-01 0.0162 0.0769 0.389 cMono_S100A L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 4.42e-01 -0.0947 0.123 0.379 gdT L2
ENSG00000079950 STX7 722231 sc-eQTL 6.38e-01 -0.0498 0.106 0.379 gdT L2
ENSG00000112303 VNN2 471970 sc-eQTL 3.31e-01 -0.114 0.117 0.379 gdT L2
ENSG00000112306 RPS12 420860 sc-eQTL 8.50e-01 -0.00846 0.0446 0.379 gdT L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 1.86e-01 0.152 0.115 0.379 gdT L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 5.69e-01 0.053 0.0928 0.393 intMono L2
ENSG00000079950 STX7 722231 sc-eQTL 2.71e-01 -0.0977 0.0885 0.393 intMono L2
ENSG00000093134 VNN3 500664 sc-eQTL 1.03e-02 0.228 0.0881 0.393 intMono L2
ENSG00000112299 VNN1 521374 sc-eQTL 2.72e-02 -0.195 0.0875 0.393 intMono L2
ENSG00000112303 VNN2 471970 sc-eQTL 3.93e-01 -0.0769 0.0899 0.393 intMono L2
ENSG00000112306 RPS12 420860 sc-eQTL 5.54e-01 0.0232 0.0391 0.393 intMono L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 5.99e-01 0.0502 0.0953 0.393 intMono L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 9.46e-01 0.00663 0.0985 0.391 ncMono L2
ENSG00000079950 STX7 722231 sc-eQTL 4.20e-01 0.0538 0.0665 0.391 ncMono L2
ENSG00000093134 VNN3 500664 sc-eQTL 6.49e-01 0.0428 0.0939 0.391 ncMono L2
ENSG00000112299 VNN1 521374 sc-eQTL 3.23e-01 -0.0921 0.093 0.391 ncMono L2
ENSG00000112303 VNN2 471970 sc-eQTL 5.74e-01 0.0504 0.0896 0.391 ncMono L2
ENSG00000112306 RPS12 420860 sc-eQTL 7.58e-01 0.0138 0.045 0.391 ncMono L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 4.23e-01 0.0637 0.0793 0.391 ncMono L2
ENSG00000028839 TBPL1 -716741 sc-eQTL 4.36e-01 -0.0885 0.113 0.393 pDC L2
ENSG00000079950 STX7 722231 sc-eQTL 7.22e-01 0.0269 0.0755 0.393 pDC L2
ENSG00000093134 VNN3 500664 sc-eQTL 6.74e-01 0.032 0.076 0.393 pDC L2
ENSG00000112299 VNN1 521374 sc-eQTL 8.89e-01 -0.0108 0.0774 0.393 pDC L2
ENSG00000112303 VNN2 471970 sc-eQTL 5.51e-01 0.0551 0.0921 0.393 pDC L2
ENSG00000112306 RPS12 420860 sc-eQTL 6.76e-02 0.116 0.0628 0.393 pDC L2
ENSG00000146409 SLC18B1 422090 sc-eQTL 4.80e-01 -0.0664 0.0938 0.393 pDC L2
ENSG00000286438 AL591115.1 132301 sc-eQTL 2.75e-01 0.098 0.0896 0.393 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -716741 sc-eQTL 2.78e-01 -0.102 0.094 0.389 B_Memory LOneK1K
ENSG00000079931 MOXD1 833954 sc-eQTL 4.49e-01 0.0694 0.0914 0.389 B_Memory LOneK1K
ENSG00000079950 STX7 722231 sc-eQTL 6.87e-01 0.0209 0.0518 0.389 B_Memory LOneK1K
ENSG00000112303 VNN2 471970 sc-eQTL 4.93e-01 0.0562 0.082 0.389 B_Memory LOneK1K
ENSG00000112306 RPS12 420860 sc-eQTL 8.74e-01 -0.00743 0.0467 0.389 B_Memory LOneK1K
ENSG00000146409 SLC18B1 422090 sc-eQTL 2.29e-01 -0.103 0.0855 0.389 B_Memory LOneK1K
ENSG00000028839 TBPL1 -716741 sc-eQTL 5.82e-02 0.164 0.0862 0.389 B_Naive LOneK1K
ENSG00000079931 MOXD1 833954 sc-eQTL 4.00e-01 0.0802 0.0952 0.389 B_Naive LOneK1K
ENSG00000079950 STX7 722231 sc-eQTL 5.63e-01 -0.0226 0.0391 0.389 B_Naive LOneK1K
ENSG00000112303 VNN2 471970 sc-eQTL 9.34e-01 -0.00631 0.076 0.389 B_Naive LOneK1K
ENSG00000112306 RPS12 420860 sc-eQTL 6.63e-01 -0.0201 0.046 0.389 B_Naive LOneK1K
ENSG00000146409 SLC18B1 422090 sc-eQTL 3.42e-01 0.0824 0.0866 0.389 B_Naive LOneK1K
ENSG00000028839 TBPL1 -716741 sc-eQTL 4.45e-01 -0.0545 0.0713 0.389 CD14_Mono LOneK1K
ENSG00000079950 STX7 722231 sc-eQTL 2.61e-01 -0.0557 0.0495 0.389 CD14_Mono LOneK1K
ENSG00000093134 VNN3 500664 sc-eQTL 7.43e-01 0.0265 0.0809 0.389 CD14_Mono LOneK1K
ENSG00000112299 VNN1 521374 sc-eQTL 7.23e-02 -0.151 0.0837 0.389 CD14_Mono LOneK1K
ENSG00000112303 VNN2 471970 sc-eQTL 1.24e-01 0.0856 0.0555 0.389 CD14_Mono LOneK1K
ENSG00000112306 RPS12 420860 sc-eQTL 9.89e-01 -0.000533 0.0383 0.389 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 422090 sc-eQTL 3.09e-01 -0.0692 0.0679 0.389 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -716741 sc-eQTL 8.77e-01 0.0147 0.0948 0.39 CD16_Mono LOneK1K
ENSG00000079950 STX7 722231 sc-eQTL 9.71e-01 0.00231 0.0625 0.39 CD16_Mono LOneK1K
ENSG00000093134 VNN3 500664 sc-eQTL 1.67e-02 0.219 0.0907 0.39 CD16_Mono LOneK1K
ENSG00000112299 VNN1 521374 sc-eQTL 4.46e-01 -0.0694 0.091 0.39 CD16_Mono LOneK1K
ENSG00000112303 VNN2 471970 sc-eQTL 7.70e-01 0.0252 0.0859 0.39 CD16_Mono LOneK1K
ENSG00000112306 RPS12 420860 sc-eQTL 6.90e-01 -0.0146 0.0364 0.39 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 422090 sc-eQTL 4.94e-01 0.0605 0.0884 0.39 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -716741 sc-eQTL 2.87e-01 -0.0797 0.0747 0.392 NK_CD56dim LOneK1K
ENSG00000079950 STX7 722231 sc-eQTL 1.38e-01 0.104 0.07 0.392 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 471970 sc-eQTL 9.92e-01 0.000916 0.089 0.392 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 420860 sc-eQTL 7.10e-01 0.0135 0.0363 0.392 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 521374 pQTL 0.00195 -0.111 0.0357 0.0 0.0 0.348
ENSG00000112303 VNN2 471970 pQTL 0.0177 0.061 0.0257 0.0 0.0 0.348

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina