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Genes within 1Mb (chr6:133212931:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -739239 sc-eQTL 4.71e-01 0.0625 0.0866 0.543 B L1
ENSG00000079931 MOXD1 811456 sc-eQTL 5.50e-01 0.0548 0.0915 0.543 B L1
ENSG00000079950 STX7 699733 sc-eQTL 9.79e-01 0.000892 0.0345 0.543 B L1
ENSG00000112303 VNN2 449472 sc-eQTL 8.53e-01 0.0121 0.0649 0.543 B L1
ENSG00000112306 RPS12 398362 sc-eQTL 7.79e-01 0.011 0.0393 0.543 B L1
ENSG00000146409 SLC18B1 399592 sc-eQTL 7.70e-01 0.0242 0.0826 0.543 B L1
ENSG00000028839 TBPL1 -739239 sc-eQTL 3.63e-01 0.0589 0.0646 0.543 CD4T L1
ENSG00000079950 STX7 699733 sc-eQTL 8.06e-01 0.0165 0.0673 0.543 CD4T L1
ENSG00000112303 VNN2 449472 sc-eQTL 1.97e-01 0.0752 0.058 0.543 CD4T L1
ENSG00000112306 RPS12 398362 sc-eQTL 3.32e-01 0.0384 0.0395 0.543 CD4T L1
ENSG00000146409 SLC18B1 399592 sc-eQTL 4.79e-01 -0.0567 0.08 0.543 CD4T L1
ENSG00000028839 TBPL1 -739239 sc-eQTL 1.92e-01 0.0828 0.0633 0.543 CD8T L1
ENSG00000079950 STX7 699733 sc-eQTL 9.39e-02 0.111 0.0659 0.543 CD8T L1
ENSG00000112303 VNN2 449472 sc-eQTL 8.59e-01 0.0138 0.0774 0.543 CD8T L1
ENSG00000112306 RPS12 398362 sc-eQTL 1.73e-01 0.036 0.0264 0.543 CD8T L1
ENSG00000146409 SLC18B1 399592 sc-eQTL 3.10e-01 -0.0812 0.0798 0.543 CD8T L1
ENSG00000028839 TBPL1 -739239 sc-eQTL 2.82e-01 0.107 0.099 0.543 DC L1
ENSG00000079950 STX7 699733 sc-eQTL 7.80e-01 -0.0173 0.0617 0.543 DC L1
ENSG00000093134 VNN3 478166 sc-eQTL 7.76e-02 0.135 0.0759 0.543 DC L1
ENSG00000112299 VNN1 498876 sc-eQTL 5.68e-01 -0.0472 0.0825 0.543 DC L1
ENSG00000112303 VNN2 449472 sc-eQTL 9.43e-01 0.00635 0.0884 0.543 DC L1
ENSG00000112306 RPS12 398362 sc-eQTL 2.34e-01 0.0589 0.0494 0.543 DC L1
ENSG00000146409 SLC18B1 399592 sc-eQTL 1.99e-01 -0.101 0.0781 0.543 DC L1
ENSG00000286438 AL591115.1 109803 sc-eQTL 7.20e-01 0.0256 0.0713 0.543 DC L1
ENSG00000028839 TBPL1 -739239 sc-eQTL 4.69e-01 -0.0495 0.0682 0.543 Mono L1
ENSG00000079950 STX7 699733 sc-eQTL 6.02e-01 -0.0238 0.0457 0.543 Mono L1
ENSG00000093134 VNN3 478166 sc-eQTL 7.75e-01 -0.0224 0.0784 0.543 Mono L1
ENSG00000112299 VNN1 498876 sc-eQTL 5.16e-02 -0.164 0.0837 0.543 Mono L1
ENSG00000112303 VNN2 449472 sc-eQTL 7.88e-02 0.104 0.0591 0.543 Mono L1
ENSG00000112306 RPS12 398362 sc-eQTL 6.30e-01 -0.0172 0.0357 0.543 Mono L1
ENSG00000146409 SLC18B1 399592 sc-eQTL 2.65e-01 -0.0787 0.0704 0.543 Mono L1
ENSG00000028839 TBPL1 -739239 sc-eQTL 7.08e-01 -0.0281 0.075 0.545 NK L1
ENSG00000079950 STX7 699733 sc-eQTL 2.51e-01 0.0797 0.0692 0.545 NK L1
ENSG00000112303 VNN2 449472 sc-eQTL 5.96e-01 -0.0459 0.0863 0.545 NK L1
ENSG00000112306 RPS12 398362 sc-eQTL 8.15e-01 -0.00838 0.0357 0.545 NK L1
ENSG00000028839 TBPL1 -739239 sc-eQTL 7.31e-01 -0.03 0.0874 0.543 Other_T L1
ENSG00000079950 STX7 699733 sc-eQTL 8.43e-01 0.0136 0.0688 0.543 Other_T L1
ENSG00000112303 VNN2 449472 sc-eQTL 6.62e-01 0.0364 0.0831 0.543 Other_T L1
ENSG00000112306 RPS12 398362 sc-eQTL 7.92e-01 0.0087 0.033 0.543 Other_T L1
ENSG00000146409 SLC18B1 399592 sc-eQTL 8.94e-01 -0.012 0.0903 0.543 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -739239 sc-eQTL 7.34e-01 -0.0347 0.102 0.536 B_Activated L2
ENSG00000079931 MOXD1 811456 sc-eQTL 9.15e-01 0.00993 0.0931 0.536 B_Activated L2
ENSG00000079950 STX7 699733 sc-eQTL 9.87e-01 -0.0014 0.0873 0.536 B_Activated L2
ENSG00000112303 VNN2 449472 sc-eQTL 4.55e-01 0.0694 0.0927 0.536 B_Activated L2
ENSG00000112306 RPS12 398362 sc-eQTL 6.51e-02 0.0915 0.0493 0.536 B_Activated L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 4.87e-01 0.0607 0.0871 0.536 B_Activated L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 3.12e-01 -0.0974 0.0961 0.541 B_Intermediate L2
ENSG00000079931 MOXD1 811456 sc-eQTL 2.74e-02 0.186 0.0836 0.541 B_Intermediate L2
ENSG00000079950 STX7 699733 sc-eQTL 5.96e-01 0.0294 0.0553 0.541 B_Intermediate L2
ENSG00000112303 VNN2 449472 sc-eQTL 1.55e-01 0.118 0.0829 0.541 B_Intermediate L2
ENSG00000112306 RPS12 398362 sc-eQTL 9.79e-01 0.00136 0.051 0.541 B_Intermediate L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 2.94e-01 -0.0964 0.0917 0.541 B_Intermediate L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 6.07e-01 -0.0478 0.0927 0.545 B_Memory L2
ENSG00000079931 MOXD1 811456 sc-eQTL 6.14e-01 0.0431 0.0855 0.545 B_Memory L2
ENSG00000079950 STX7 699733 sc-eQTL 4.68e-01 0.0487 0.067 0.545 B_Memory L2
ENSG00000112303 VNN2 449472 sc-eQTL 4.92e-01 0.0604 0.0877 0.545 B_Memory L2
ENSG00000112306 RPS12 398362 sc-eQTL 9.22e-01 0.00417 0.0423 0.545 B_Memory L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 2.94e-01 -0.0926 0.088 0.545 B_Memory L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 8.09e-01 0.021 0.0865 0.543 B_Naive1 L2
ENSG00000079931 MOXD1 811456 sc-eQTL 2.19e-01 0.117 0.0948 0.543 B_Naive1 L2
ENSG00000079950 STX7 699733 sc-eQTL 4.42e-01 -0.032 0.0415 0.543 B_Naive1 L2
ENSG00000112303 VNN2 449472 sc-eQTL 1.03e-01 -0.132 0.0803 0.543 B_Naive1 L2
ENSG00000112306 RPS12 398362 sc-eQTL 9.19e-01 0.00467 0.046 0.543 B_Naive1 L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 9.03e-01 0.0109 0.0888 0.543 B_Naive1 L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 1.98e-02 0.212 0.0903 0.545 B_Naive2 L2
ENSG00000079931 MOXD1 811456 sc-eQTL 8.23e-01 -0.02 0.0892 0.545 B_Naive2 L2
ENSG00000079950 STX7 699733 sc-eQTL 9.07e-01 0.00566 0.0486 0.545 B_Naive2 L2
ENSG00000112303 VNN2 449472 sc-eQTL 3.10e-01 0.0906 0.089 0.545 B_Naive2 L2
ENSG00000112306 RPS12 398362 sc-eQTL 4.17e-01 0.0383 0.0472 0.545 B_Naive2 L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 6.27e-02 0.167 0.0894 0.545 B_Naive2 L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 2.27e-01 0.111 0.0919 0.541 CD4_CTL L2
ENSG00000079950 STX7 699733 sc-eQTL 5.38e-01 0.0565 0.0915 0.541 CD4_CTL L2
ENSG00000112303 VNN2 449472 sc-eQTL 3.27e-01 0.0905 0.0922 0.541 CD4_CTL L2
ENSG00000112306 RPS12 398362 sc-eQTL 7.91e-02 0.0748 0.0424 0.541 CD4_CTL L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 2.89e-01 0.0913 0.0858 0.541 CD4_CTL L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 2.88e-01 0.0783 0.0735 0.543 CD4_Naive L2
ENSG00000079950 STX7 699733 sc-eQTL 3.76e-01 -0.064 0.0721 0.543 CD4_Naive L2
ENSG00000112303 VNN2 449472 sc-eQTL 5.34e-01 0.0416 0.0669 0.543 CD4_Naive L2
ENSG00000112306 RPS12 398362 sc-eQTL 4.18e-01 0.0352 0.0434 0.543 CD4_Naive L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 7.53e-01 -0.0263 0.0836 0.543 CD4_Naive L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 7.79e-01 0.0222 0.079 0.543 CD4_TCM L2
ENSG00000079950 STX7 699733 sc-eQTL 8.03e-02 0.139 0.079 0.543 CD4_TCM L2
ENSG00000112303 VNN2 449472 sc-eQTL 1.55e-01 0.111 0.078 0.543 CD4_TCM L2
ENSG00000112306 RPS12 398362 sc-eQTL 1.14e-01 0.0642 0.0404 0.543 CD4_TCM L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 7.18e-01 -0.034 0.0941 0.543 CD4_TCM L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 9.86e-01 0.00161 0.0919 0.543 CD4_TEM L2
ENSG00000079950 STX7 699733 sc-eQTL 5.68e-01 0.0526 0.092 0.543 CD4_TEM L2
ENSG00000112303 VNN2 449472 sc-eQTL 8.05e-01 0.0218 0.0883 0.543 CD4_TEM L2
ENSG00000112306 RPS12 398362 sc-eQTL 4.74e-01 0.026 0.0362 0.543 CD4_TEM L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 8.44e-01 -0.0178 0.09 0.543 CD4_TEM L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 6.53e-01 0.0365 0.0812 0.543 CD8_CTL L2
ENSG00000079950 STX7 699733 sc-eQTL 4.66e-02 0.151 0.0753 0.543 CD8_CTL L2
ENSG00000112303 VNN2 449472 sc-eQTL 6.57e-01 -0.0384 0.0863 0.543 CD8_CTL L2
ENSG00000112306 RPS12 398362 sc-eQTL 9.30e-01 0.00406 0.0462 0.543 CD8_CTL L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 7.17e-01 0.0325 0.0895 0.543 CD8_CTL L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 9.13e-01 0.00937 0.0861 0.543 CD8_Naive L2
ENSG00000079950 STX7 699733 sc-eQTL 2.56e-01 0.104 0.0915 0.543 CD8_Naive L2
ENSG00000112303 VNN2 449472 sc-eQTL 4.28e-01 0.0629 0.0791 0.543 CD8_Naive L2
ENSG00000112306 RPS12 398362 sc-eQTL 8.23e-01 0.0102 0.0453 0.543 CD8_Naive L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 7.04e-01 -0.0346 0.0909 0.543 CD8_Naive L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 5.75e-01 -0.0559 0.0995 0.549 CD8_TCM L2
ENSG00000079950 STX7 699733 sc-eQTL 6.35e-01 0.0438 0.0921 0.549 CD8_TCM L2
ENSG00000112303 VNN2 449472 sc-eQTL 6.12e-01 -0.0464 0.0914 0.549 CD8_TCM L2
ENSG00000112306 RPS12 398362 sc-eQTL 6.04e-01 0.0231 0.0446 0.549 CD8_TCM L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 5.52e-02 0.187 0.0968 0.549 CD8_TCM L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 4.68e-01 -0.0637 0.0877 0.534 CD8_TEM L2
ENSG00000079950 STX7 699733 sc-eQTL 3.71e-01 -0.0858 0.0957 0.534 CD8_TEM L2
ENSG00000112303 VNN2 449472 sc-eQTL 1.88e-01 -0.125 0.0949 0.534 CD8_TEM L2
ENSG00000112306 RPS12 398362 sc-eQTL 3.41e-01 0.0489 0.0512 0.534 CD8_TEM L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 3.74e-01 -0.0862 0.0968 0.534 CD8_TEM L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 8.42e-01 -0.0186 0.0934 0.543 MAIT L2
ENSG00000079950 STX7 699733 sc-eQTL 5.97e-01 -0.0469 0.0887 0.543 MAIT L2
ENSG00000112303 VNN2 449472 sc-eQTL 6.10e-01 0.0461 0.0902 0.543 MAIT L2
ENSG00000112306 RPS12 398362 sc-eQTL 6.93e-01 0.0176 0.0444 0.543 MAIT L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 9.32e-01 -0.00791 0.0931 0.543 MAIT L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 7.96e-01 0.0254 0.0982 0.542 NK_CD56bright L2
ENSG00000079950 STX7 699733 sc-eQTL 5.91e-01 0.049 0.091 0.542 NK_CD56bright L2
ENSG00000112303 VNN2 449472 sc-eQTL 2.15e-01 0.115 0.0922 0.542 NK_CD56bright L2
ENSG00000112306 RPS12 398362 sc-eQTL 1.15e-01 0.0812 0.0512 0.542 NK_CD56bright L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 6.78e-01 -0.0336 0.0808 0.545 NK_CD56dim L2
ENSG00000079950 STX7 699733 sc-eQTL 6.46e-01 0.034 0.074 0.545 NK_CD56dim L2
ENSG00000112303 VNN2 449472 sc-eQTL 3.45e-01 -0.0874 0.0924 0.545 NK_CD56dim L2
ENSG00000112306 RPS12 398362 sc-eQTL 9.92e-01 -0.000363 0.0367 0.545 NK_CD56dim L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 7.98e-01 0.0256 0.1 0.548 NK_HLA L2
ENSG00000079950 STX7 699733 sc-eQTL 2.30e-01 0.109 0.0906 0.548 NK_HLA L2
ENSG00000112303 VNN2 449472 sc-eQTL 3.01e-01 -0.0952 0.0918 0.548 NK_HLA L2
ENSG00000112306 RPS12 398362 sc-eQTL 6.22e-01 0.0212 0.0429 0.548 NK_HLA L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 7.45e-01 -0.0274 0.084 0.545 NK_cytokine L2
ENSG00000079950 STX7 699733 sc-eQTL 3.86e-01 0.0705 0.0812 0.545 NK_cytokine L2
ENSG00000112303 VNN2 449472 sc-eQTL 6.41e-01 -0.0427 0.0915 0.545 NK_cytokine L2
ENSG00000112306 RPS12 398362 sc-eQTL 4.55e-01 0.0371 0.0496 0.545 NK_cytokine L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 5.80e-01 0.0643 0.116 0.548 PB L2
ENSG00000079931 MOXD1 811456 sc-eQTL 5.38e-01 -0.0611 0.0989 0.548 PB L2
ENSG00000079950 STX7 699733 sc-eQTL 6.81e-01 0.034 0.0827 0.548 PB L2
ENSG00000112303 VNN2 449472 sc-eQTL 4.95e-01 0.0691 0.101 0.548 PB L2
ENSG00000112306 RPS12 398362 sc-eQTL 9.23e-02 -0.0962 0.0567 0.548 PB L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 5.22e-01 -0.069 0.107 0.548 PB L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 6.97e-01 0.0361 0.0926 0.543 Pro_T L2
ENSG00000079950 STX7 699733 sc-eQTL 7.82e-02 0.145 0.0821 0.543 Pro_T L2
ENSG00000112303 VNN2 449472 sc-eQTL 5.36e-01 0.055 0.0887 0.543 Pro_T L2
ENSG00000112306 RPS12 398362 sc-eQTL 7.76e-01 -0.00955 0.0336 0.543 Pro_T L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 4.96e-01 0.0592 0.0868 0.543 Pro_T L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 7.57e-01 0.0296 0.0957 0.543 Treg L2
ENSG00000079950 STX7 699733 sc-eQTL 5.88e-01 -0.0489 0.0902 0.543 Treg L2
ENSG00000112303 VNN2 449472 sc-eQTL 5.74e-01 0.0427 0.0759 0.543 Treg L2
ENSG00000112306 RPS12 398362 sc-eQTL 6.55e-01 0.015 0.0336 0.543 Treg L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 5.81e-01 -0.0524 0.0948 0.543 Treg L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 8.52e-02 0.171 0.0989 0.539 cDC L2
ENSG00000079950 STX7 699733 sc-eQTL 3.07e-01 -0.0799 0.0781 0.539 cDC L2
ENSG00000093134 VNN3 478166 sc-eQTL 1.49e-02 0.188 0.0765 0.539 cDC L2
ENSG00000112299 VNN1 498876 sc-eQTL 7.59e-01 -0.0281 0.0914 0.539 cDC L2
ENSG00000112303 VNN2 449472 sc-eQTL 5.27e-01 -0.0564 0.089 0.539 cDC L2
ENSG00000112306 RPS12 398362 sc-eQTL 6.97e-01 0.0171 0.044 0.539 cDC L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 2.17e-01 0.107 0.0867 0.539 cDC L2
ENSG00000286438 AL591115.1 109803 sc-eQTL 8.88e-01 0.00978 0.0696 0.539 cDC L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 2.15e-01 -0.0968 0.0779 0.543 cMono_IL1B L2
ENSG00000079950 STX7 699733 sc-eQTL 9.01e-01 -0.00739 0.0593 0.543 cMono_IL1B L2
ENSG00000093134 VNN3 478166 sc-eQTL 7.81e-01 -0.0234 0.0838 0.543 cMono_IL1B L2
ENSG00000112299 VNN1 498876 sc-eQTL 6.59e-02 -0.155 0.0839 0.543 cMono_IL1B L2
ENSG00000112303 VNN2 449472 sc-eQTL 6.47e-02 0.125 0.0671 0.543 cMono_IL1B L2
ENSG00000112306 RPS12 398362 sc-eQTL 8.20e-01 -0.00853 0.0375 0.543 cMono_IL1B L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 7.07e-02 -0.131 0.0719 0.543 cMono_IL1B L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 7.94e-01 -0.0232 0.0886 0.543 cMono_S100A L2
ENSG00000079950 STX7 699733 sc-eQTL 6.54e-02 -0.118 0.0635 0.543 cMono_S100A L2
ENSG00000093134 VNN3 478166 sc-eQTL 6.87e-01 -0.0323 0.0799 0.543 cMono_S100A L2
ENSG00000112299 VNN1 498876 sc-eQTL 2.50e-01 -0.0998 0.0865 0.543 cMono_S100A L2
ENSG00000112303 VNN2 449472 sc-eQTL 3.30e-01 0.0553 0.0567 0.543 cMono_S100A L2
ENSG00000112306 RPS12 398362 sc-eQTL 2.69e-01 -0.0452 0.0408 0.543 cMono_S100A L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 6.78e-01 0.0314 0.0757 0.543 cMono_S100A L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 1.54e-01 -0.177 0.124 0.524 gdT L2
ENSG00000079950 STX7 699733 sc-eQTL 8.41e-01 0.0215 0.107 0.524 gdT L2
ENSG00000112303 VNN2 449472 sc-eQTL 7.99e-02 -0.207 0.117 0.524 gdT L2
ENSG00000112306 RPS12 398362 sc-eQTL 1.60e-01 0.0633 0.0448 0.524 gdT L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 6.13e-01 0.0591 0.117 0.524 gdT L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 8.02e-01 0.0227 0.0903 0.542 intMono L2
ENSG00000079950 STX7 699733 sc-eQTL 6.49e-01 -0.0393 0.0862 0.542 intMono L2
ENSG00000093134 VNN3 478166 sc-eQTL 1.93e-02 0.203 0.0859 0.542 intMono L2
ENSG00000112299 VNN1 498876 sc-eQTL 2.47e-01 -0.0997 0.0858 0.542 intMono L2
ENSG00000112303 VNN2 449472 sc-eQTL 4.64e-01 0.0641 0.0874 0.542 intMono L2
ENSG00000112306 RPS12 398362 sc-eQTL 5.42e-01 0.0233 0.0381 0.542 intMono L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 9.08e-01 -0.0107 0.0927 0.542 intMono L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 7.45e-01 0.0314 0.0962 0.545 ncMono L2
ENSG00000079950 STX7 699733 sc-eQTL 4.53e-01 0.0488 0.065 0.545 ncMono L2
ENSG00000093134 VNN3 478166 sc-eQTL 4.55e-01 0.0686 0.0917 0.545 ncMono L2
ENSG00000112299 VNN1 498876 sc-eQTL 7.66e-02 -0.161 0.0904 0.545 ncMono L2
ENSG00000112303 VNN2 449472 sc-eQTL 4.27e-01 0.0697 0.0875 0.545 ncMono L2
ENSG00000112306 RPS12 398362 sc-eQTL 6.66e-01 -0.019 0.0439 0.545 ncMono L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 8.85e-01 -0.0112 0.0776 0.545 ncMono L2
ENSG00000028839 TBPL1 -739239 sc-eQTL 4.47e-01 -0.0869 0.114 0.54 pDC L2
ENSG00000079950 STX7 699733 sc-eQTL 9.30e-01 0.0067 0.0759 0.54 pDC L2
ENSG00000093134 VNN3 478166 sc-eQTL 3.15e-01 0.0768 0.0762 0.54 pDC L2
ENSG00000112299 VNN1 498876 sc-eQTL 7.61e-01 0.0237 0.0778 0.54 pDC L2
ENSG00000112303 VNN2 449472 sc-eQTL 2.72e-01 0.102 0.0922 0.54 pDC L2
ENSG00000112306 RPS12 398362 sc-eQTL 3.12e-01 0.0645 0.0636 0.54 pDC L2
ENSG00000146409 SLC18B1 399592 sc-eQTL 4.96e-02 -0.185 0.0932 0.54 pDC L2
ENSG00000286438 AL591115.1 109803 sc-eQTL 6.23e-01 0.0444 0.0903 0.54 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -739239 sc-eQTL 3.35e-01 -0.0889 0.092 0.543 B_Memory LOneK1K
ENSG00000079931 MOXD1 811456 sc-eQTL 7.28e-02 0.16 0.0889 0.543 B_Memory LOneK1K
ENSG00000079950 STX7 699733 sc-eQTL 5.40e-01 0.0311 0.0507 0.543 B_Memory LOneK1K
ENSG00000112303 VNN2 449472 sc-eQTL 2.36e-01 0.095 0.08 0.543 B_Memory LOneK1K
ENSG00000112306 RPS12 398362 sc-eQTL 8.20e-01 0.0104 0.0457 0.543 B_Memory LOneK1K
ENSG00000146409 SLC18B1 399592 sc-eQTL 5.06e-01 -0.0559 0.0839 0.543 B_Memory LOneK1K
ENSG00000028839 TBPL1 -739239 sc-eQTL 8.05e-02 0.152 0.0868 0.543 B_Naive LOneK1K
ENSG00000079931 MOXD1 811456 sc-eQTL 3.44e-01 0.0909 0.0958 0.543 B_Naive LOneK1K
ENSG00000079950 STX7 699733 sc-eQTL 7.55e-01 -0.0123 0.0394 0.543 B_Naive LOneK1K
ENSG00000112303 VNN2 449472 sc-eQTL 6.93e-01 -0.0302 0.0765 0.543 B_Naive LOneK1K
ENSG00000112306 RPS12 398362 sc-eQTL 5.75e-01 0.026 0.0463 0.543 B_Naive LOneK1K
ENSG00000146409 SLC18B1 399592 sc-eQTL 2.29e-01 0.105 0.087 0.543 B_Naive LOneK1K
ENSG00000028839 TBPL1 -739239 sc-eQTL 3.84e-01 -0.0619 0.071 0.543 CD14_Mono LOneK1K
ENSG00000079950 STX7 699733 sc-eQTL 3.75e-01 -0.0439 0.0494 0.543 CD14_Mono LOneK1K
ENSG00000093134 VNN3 478166 sc-eQTL 7.04e-01 -0.0307 0.0806 0.543 CD14_Mono LOneK1K
ENSG00000112299 VNN1 498876 sc-eQTL 9.27e-02 -0.141 0.0835 0.543 CD14_Mono LOneK1K
ENSG00000112303 VNN2 449472 sc-eQTL 9.70e-02 0.0921 0.0552 0.543 CD14_Mono LOneK1K
ENSG00000112306 RPS12 398362 sc-eQTL 6.40e-01 -0.0178 0.0381 0.543 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 399592 sc-eQTL 2.80e-01 -0.0733 0.0676 0.543 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -739239 sc-eQTL 8.98e-01 -0.0119 0.0925 0.545 CD16_Mono LOneK1K
ENSG00000079950 STX7 699733 sc-eQTL 8.03e-01 0.0152 0.061 0.545 CD16_Mono LOneK1K
ENSG00000093134 VNN3 478166 sc-eQTL 7.51e-02 0.159 0.0891 0.545 CD16_Mono LOneK1K
ENSG00000112299 VNN1 498876 sc-eQTL 1.53e-01 -0.127 0.0885 0.545 CD16_Mono LOneK1K
ENSG00000112303 VNN2 449472 sc-eQTL 3.59e-01 0.077 0.0837 0.545 CD16_Mono LOneK1K
ENSG00000112306 RPS12 398362 sc-eQTL 7.53e-01 -0.0112 0.0356 0.545 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 399592 sc-eQTL 6.45e-01 -0.0398 0.0864 0.545 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -739239 sc-eQTL 6.74e-01 -0.0313 0.0744 0.545 NK_CD56dim LOneK1K
ENSG00000079950 STX7 699733 sc-eQTL 3.24e-01 0.0689 0.0697 0.545 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 449472 sc-eQTL 4.24e-01 -0.0708 0.0883 0.545 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 398362 sc-eQTL 7.02e-01 -0.0138 0.0361 0.545 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 498876 pQTL 0.0141 -0.0836 0.034 0.0 0.0 0.463

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000028839 \N -739239 3.21e-07 2.5e-07 5.35e-08 2.62e-07 1.1e-07 1.32e-07 2.5e-07 5.62e-08 1.86e-07 9.72e-08 2.18e-07 1.46e-07 3.18e-07 9.15e-08 7.79e-08 7.23e-08 4.31e-08 1.91e-07 7.42e-08 6.16e-08 1.18e-07 1.47e-07 1.62e-07 4.27e-08 2.37e-07 1.26e-07 1.2e-07 1.1e-07 1.32e-07 1.69e-07 1.39e-07 5.32e-08 3.29e-08 1.24e-07 6.87e-08 5.32e-08 5.54e-08 7.63e-08 6.35e-08 5.45e-08 4.64e-08 1.6e-07 3.26e-08 7.28e-09 3.4e-08 1.32e-08 1.19e-07 2.13e-09 4.69e-08