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Genes within 1Mb (chr6:133033737:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -918433 sc-eQTL 1.45e-01 -0.131 0.0897 0.425 B L1
ENSG00000079931 MOXD1 632262 sc-eQTL 1.56e-01 0.135 0.0947 0.425 B L1
ENSG00000079950 STX7 520539 sc-eQTL 3.70e-02 0.0746 0.0355 0.425 B L1
ENSG00000112303 VNN2 270278 sc-eQTL 4.82e-01 -0.0475 0.0674 0.425 B L1
ENSG00000112306 RPS12 219168 sc-eQTL 1.92e-01 0.0532 0.0406 0.425 B L1
ENSG00000146409 SLC18B1 220398 sc-eQTL 1.36e-01 -0.128 0.0854 0.425 B L1
ENSG00000228495 LINC01013 901849 sc-eQTL 1.90e-01 0.0738 0.0561 0.425 B L1
ENSG00000028839 TBPL1 -918433 sc-eQTL 5.02e-01 0.0446 0.0663 0.425 CD4T L1
ENSG00000079950 STX7 520539 sc-eQTL 5.04e-02 0.135 0.0684 0.425 CD4T L1
ENSG00000112303 VNN2 270278 sc-eQTL 4.33e-01 0.0469 0.0597 0.425 CD4T L1
ENSG00000112306 RPS12 219168 sc-eQTL 5.35e-01 0.0252 0.0406 0.425 CD4T L1
ENSG00000146409 SLC18B1 220398 sc-eQTL 2.26e-01 -0.0994 0.0819 0.425 CD4T L1
ENSG00000028839 TBPL1 -918433 sc-eQTL 8.68e-01 0.0107 0.0644 0.425 CD8T L1
ENSG00000079950 STX7 520539 sc-eQTL 1.71e-02 0.159 0.0663 0.425 CD8T L1
ENSG00000112303 VNN2 270278 sc-eQTL 1.60e-01 0.11 0.0781 0.425 CD8T L1
ENSG00000112306 RPS12 219168 sc-eQTL 5.23e-01 0.0171 0.0268 0.425 CD8T L1
ENSG00000146409 SLC18B1 220398 sc-eQTL 2.70e-01 -0.0893 0.0808 0.425 CD8T L1
ENSG00000028839 TBPL1 -918433 sc-eQTL 3.75e-01 -0.0867 0.0975 0.43 DC L1
ENSG00000079950 STX7 520539 sc-eQTL 4.17e-01 0.0493 0.0606 0.43 DC L1
ENSG00000093134 VNN3 298972 sc-eQTL 2.14e-01 -0.0935 0.075 0.43 DC L1
ENSG00000112299 VNN1 319682 sc-eQTL 4.60e-01 -0.0601 0.0811 0.43 DC L1
ENSG00000112303 VNN2 270278 sc-eQTL 3.26e-01 -0.0854 0.0867 0.43 DC L1
ENSG00000112306 RPS12 219168 sc-eQTL 3.39e-01 0.0466 0.0486 0.43 DC L1
ENSG00000146409 SLC18B1 220398 sc-eQTL 5.04e-01 0.0515 0.077 0.43 DC L1
ENSG00000286438 AL591115.1 -69391 sc-eQTL 6.85e-02 0.127 0.0696 0.43 DC L1
ENSG00000028839 TBPL1 -918433 sc-eQTL 4.11e-01 -0.0581 0.0706 0.425 Mono L1
ENSG00000079950 STX7 520539 sc-eQTL 1.04e-02 0.12 0.0466 0.425 Mono L1
ENSG00000093134 VNN3 298972 sc-eQTL 8.40e-01 -0.0164 0.0812 0.425 Mono L1
ENSG00000112299 VNN1 319682 sc-eQTL 8.00e-01 0.0221 0.0873 0.425 Mono L1
ENSG00000112303 VNN2 270278 sc-eQTL 8.41e-01 -0.0124 0.0616 0.425 Mono L1
ENSG00000112306 RPS12 219168 sc-eQTL 9.51e-02 0.0615 0.0367 0.425 Mono L1
ENSG00000146409 SLC18B1 220398 sc-eQTL 7.87e-01 0.0198 0.0731 0.425 Mono L1
ENSG00000028839 TBPL1 -918433 sc-eQTL 8.71e-01 -0.0121 0.0747 0.425 NK L1
ENSG00000079950 STX7 520539 sc-eQTL 2.49e-02 0.154 0.0682 0.425 NK L1
ENSG00000112303 VNN2 270278 sc-eQTL 2.76e-01 0.0937 0.0857 0.425 NK L1
ENSG00000112306 RPS12 219168 sc-eQTL 1.59e-01 -0.0501 0.0354 0.425 NK L1
ENSG00000028839 TBPL1 -918433 sc-eQTL 9.84e-01 0.00173 0.0874 0.425 Other_T L1
ENSG00000079950 STX7 520539 sc-eQTL 6.53e-01 0.0309 0.0687 0.425 Other_T L1
ENSG00000112303 VNN2 270278 sc-eQTL 8.52e-01 -0.0156 0.0831 0.425 Other_T L1
ENSG00000112306 RPS12 219168 sc-eQTL 1.04e-01 -0.0535 0.0328 0.425 Other_T L1
ENSG00000146409 SLC18B1 220398 sc-eQTL 8.12e-01 0.0215 0.0902 0.425 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -918433 sc-eQTL 5.21e-02 -0.204 0.104 0.413 B_Activated L2
ENSG00000079931 MOXD1 632262 sc-eQTL 5.72e-02 0.182 0.0952 0.413 B_Activated L2
ENSG00000079950 STX7 520539 sc-eQTL 1.22e-02 0.224 0.0886 0.413 B_Activated L2
ENSG00000112303 VNN2 270278 sc-eQTL 7.23e-02 -0.172 0.0951 0.413 B_Activated L2
ENSG00000112306 RPS12 219168 sc-eQTL 3.50e-01 0.0481 0.0513 0.413 B_Activated L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 4.55e-01 0.0674 0.0899 0.413 B_Activated L2
ENSG00000228495 LINC01013 901849 sc-eQTL 2.10e-02 0.197 0.0846 0.413 B_Activated L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 9.34e-01 -0.00815 0.0982 0.423 B_Intermediate L2
ENSG00000079931 MOXD1 632262 sc-eQTL 8.98e-01 -0.011 0.0862 0.423 B_Intermediate L2
ENSG00000079950 STX7 520539 sc-eQTL 1.18e-02 0.141 0.0556 0.423 B_Intermediate L2
ENSG00000112303 VNN2 270278 sc-eQTL 4.73e-01 0.061 0.0849 0.423 B_Intermediate L2
ENSG00000112306 RPS12 219168 sc-eQTL 9.88e-01 -0.000802 0.052 0.423 B_Intermediate L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 7.07e-02 -0.169 0.093 0.423 B_Intermediate L2
ENSG00000228495 LINC01013 901849 sc-eQTL 3.09e-01 -0.0811 0.0795 0.423 B_Intermediate L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 2.36e-02 0.211 0.0925 0.425 B_Memory L2
ENSG00000079931 MOXD1 632262 sc-eQTL 1.04e-01 0.14 0.0859 0.425 B_Memory L2
ENSG00000079950 STX7 520539 sc-eQTL 3.64e-01 0.0615 0.0677 0.425 B_Memory L2
ENSG00000112303 VNN2 270278 sc-eQTL 4.76e-01 0.0632 0.0886 0.425 B_Memory L2
ENSG00000112306 RPS12 219168 sc-eQTL 5.78e-01 0.0238 0.0427 0.425 B_Memory L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 6.07e-01 -0.0459 0.0891 0.425 B_Memory L2
ENSG00000228495 LINC01013 901849 sc-eQTL 7.75e-01 0.0238 0.0831 0.425 B_Memory L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 2.58e-01 -0.101 0.0888 0.425 B_Naive1 L2
ENSG00000079931 MOXD1 632262 sc-eQTL 9.28e-01 0.00889 0.0979 0.425 B_Naive1 L2
ENSG00000079950 STX7 520539 sc-eQTL 2.85e-01 0.0458 0.0427 0.425 B_Naive1 L2
ENSG00000112303 VNN2 270278 sc-eQTL 6.13e-01 -0.042 0.0831 0.425 B_Naive1 L2
ENSG00000112306 RPS12 219168 sc-eQTL 9.21e-01 -0.00472 0.0473 0.425 B_Naive1 L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 5.62e-01 0.053 0.0913 0.425 B_Naive1 L2
ENSG00000228495 LINC01013 901849 sc-eQTL 1.82e-01 0.0806 0.0602 0.425 B_Naive1 L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 1.02e-01 -0.154 0.0939 0.425 B_Naive2 L2
ENSG00000079931 MOXD1 632262 sc-eQTL 4.74e-01 0.0659 0.092 0.425 B_Naive2 L2
ENSG00000079950 STX7 520539 sc-eQTL 6.16e-02 0.0935 0.0498 0.425 B_Naive2 L2
ENSG00000112303 VNN2 270278 sc-eQTL 7.44e-01 -0.0301 0.0921 0.425 B_Naive2 L2
ENSG00000112306 RPS12 219168 sc-eQTL 9.86e-01 -0.000841 0.0488 0.425 B_Naive2 L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 1.87e-01 -0.123 0.0927 0.425 B_Naive2 L2
ENSG00000228495 LINC01013 901849 sc-eQTL 7.37e-01 0.0217 0.0645 0.425 B_Naive2 L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 5.94e-01 0.0495 0.0926 0.43 CD4_CTL L2
ENSG00000079950 STX7 520539 sc-eQTL 9.13e-01 0.0101 0.0921 0.43 CD4_CTL L2
ENSG00000112303 VNN2 270278 sc-eQTL 1.19e-01 0.145 0.0923 0.43 CD4_CTL L2
ENSG00000112306 RPS12 219168 sc-eQTL 5.53e-01 -0.0255 0.0429 0.43 CD4_CTL L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 5.97e-01 0.0458 0.0865 0.43 CD4_CTL L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 3.99e-01 0.0644 0.0762 0.425 CD4_Naive L2
ENSG00000079950 STX7 520539 sc-eQTL 4.09e-01 0.0618 0.0747 0.425 CD4_Naive L2
ENSG00000112303 VNN2 270278 sc-eQTL 9.73e-01 -0.00233 0.0693 0.425 CD4_Naive L2
ENSG00000112306 RPS12 219168 sc-eQTL 6.23e-01 0.0221 0.0449 0.425 CD4_Naive L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 3.80e-01 -0.076 0.0864 0.425 CD4_Naive L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 8.82e-01 0.012 0.0805 0.425 CD4_TCM L2
ENSG00000079950 STX7 520539 sc-eQTL 2.89e-02 0.176 0.0801 0.425 CD4_TCM L2
ENSG00000112303 VNN2 270278 sc-eQTL 4.15e-01 0.0651 0.0798 0.425 CD4_TCM L2
ENSG00000112306 RPS12 219168 sc-eQTL 7.79e-01 0.0116 0.0414 0.425 CD4_TCM L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 8.51e-02 -0.165 0.0953 0.425 CD4_TCM L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 9.71e-01 0.00339 0.0919 0.425 CD4_TEM L2
ENSG00000079950 STX7 520539 sc-eQTL 2.61e-01 0.103 0.0917 0.425 CD4_TEM L2
ENSG00000112303 VNN2 270278 sc-eQTL 5.91e-01 -0.0475 0.0882 0.425 CD4_TEM L2
ENSG00000112306 RPS12 219168 sc-eQTL 6.82e-01 -0.0149 0.0362 0.425 CD4_TEM L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 5.90e-01 -0.0486 0.0899 0.425 CD4_TEM L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 3.84e-01 -0.0719 0.0824 0.425 CD8_CTL L2
ENSG00000079950 STX7 520539 sc-eQTL 3.55e-01 0.0714 0.077 0.425 CD8_CTL L2
ENSG00000112303 VNN2 270278 sc-eQTL 3.73e-02 0.182 0.0867 0.425 CD8_CTL L2
ENSG00000112306 RPS12 219168 sc-eQTL 2.95e-01 -0.0491 0.0468 0.425 CD8_CTL L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 1.79e-01 -0.122 0.0905 0.425 CD8_CTL L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 5.71e-01 0.0492 0.0867 0.425 CD8_Naive L2
ENSG00000079950 STX7 520539 sc-eQTL 3.76e-02 0.191 0.0915 0.425 CD8_Naive L2
ENSG00000112303 VNN2 270278 sc-eQTL 5.25e-01 0.0507 0.0797 0.425 CD8_Naive L2
ENSG00000112306 RPS12 219168 sc-eQTL 9.55e-01 -0.0026 0.0457 0.425 CD8_Naive L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 1.29e-01 -0.139 0.0911 0.425 CD8_Naive L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 9.27e-01 -0.00899 0.0983 0.433 CD8_TCM L2
ENSG00000079950 STX7 520539 sc-eQTL 8.31e-01 0.0195 0.091 0.433 CD8_TCM L2
ENSG00000112303 VNN2 270278 sc-eQTL 9.34e-01 0.00747 0.0903 0.433 CD8_TCM L2
ENSG00000112306 RPS12 219168 sc-eQTL 6.79e-01 -0.0182 0.044 0.433 CD8_TCM L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 3.12e-01 -0.0975 0.0962 0.433 CD8_TCM L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 8.39e-01 -0.0183 0.09 0.42 CD8_TEM L2
ENSG00000079950 STX7 520539 sc-eQTL 2.49e-01 0.113 0.098 0.42 CD8_TEM L2
ENSG00000112303 VNN2 270278 sc-eQTL 9.69e-01 0.00384 0.0977 0.42 CD8_TEM L2
ENSG00000112306 RPS12 219168 sc-eQTL 7.15e-01 -0.0192 0.0525 0.42 CD8_TEM L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 4.04e-01 0.0829 0.0992 0.42 CD8_TEM L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 4.93e-01 -0.064 0.0933 0.429 MAIT L2
ENSG00000079950 STX7 520539 sc-eQTL 3.30e-01 -0.0864 0.0885 0.429 MAIT L2
ENSG00000112303 VNN2 270278 sc-eQTL 2.74e-01 -0.0987 0.09 0.429 MAIT L2
ENSG00000112306 RPS12 219168 sc-eQTL 8.34e-01 -0.00931 0.0444 0.429 MAIT L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 7.98e-01 0.0239 0.0931 0.429 MAIT L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 1.01e-01 -0.164 0.0994 0.427 NK_CD56bright L2
ENSG00000079950 STX7 520539 sc-eQTL 4.25e-01 -0.074 0.0926 0.427 NK_CD56bright L2
ENSG00000112303 VNN2 270278 sc-eQTL 4.93e-01 -0.0647 0.0941 0.427 NK_CD56bright L2
ENSG00000112306 RPS12 219168 sc-eQTL 3.54e-01 -0.0487 0.0524 0.427 NK_CD56bright L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 5.37e-01 -0.0492 0.0796 0.425 NK_CD56dim L2
ENSG00000079950 STX7 520539 sc-eQTL 3.74e-03 0.21 0.0715 0.425 NK_CD56dim L2
ENSG00000112303 VNN2 270278 sc-eQTL 1.30e-01 0.138 0.0907 0.425 NK_CD56dim L2
ENSG00000112306 RPS12 219168 sc-eQTL 3.26e-02 -0.077 0.0358 0.425 NK_CD56dim L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 8.34e-01 0.0209 0.0994 0.42 NK_HLA L2
ENSG00000079950 STX7 520539 sc-eQTL 2.40e-01 0.106 0.0901 0.42 NK_HLA L2
ENSG00000112303 VNN2 270278 sc-eQTL 2.03e-01 -0.116 0.0912 0.42 NK_HLA L2
ENSG00000112306 RPS12 219168 sc-eQTL 3.61e-01 -0.039 0.0426 0.42 NK_HLA L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 4.69e-01 0.0595 0.0819 0.425 NK_cytokine L2
ENSG00000079950 STX7 520539 sc-eQTL 5.76e-01 0.0444 0.0793 0.425 NK_cytokine L2
ENSG00000112303 VNN2 270278 sc-eQTL 1.98e-01 0.115 0.0889 0.425 NK_cytokine L2
ENSG00000112306 RPS12 219168 sc-eQTL 1.86e-01 -0.064 0.0482 0.425 NK_cytokine L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 8.06e-01 -0.0293 0.119 0.441 PB L2
ENSG00000079931 MOXD1 632262 sc-eQTL 2.26e-03 0.305 0.0975 0.441 PB L2
ENSG00000079950 STX7 520539 sc-eQTL 8.11e-01 0.0203 0.0849 0.441 PB L2
ENSG00000112303 VNN2 270278 sc-eQTL 7.96e-01 0.0269 0.104 0.441 PB L2
ENSG00000112306 RPS12 219168 sc-eQTL 7.09e-01 0.022 0.0588 0.441 PB L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 8.88e-01 -0.0156 0.11 0.441 PB L2
ENSG00000228495 LINC01013 901849 sc-eQTL 4.60e-01 -0.0537 0.0724 0.441 PB L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 7.04e-01 0.0352 0.0926 0.422 Pro_T L2
ENSG00000079950 STX7 520539 sc-eQTL 6.85e-01 -0.0336 0.0827 0.422 Pro_T L2
ENSG00000112303 VNN2 270278 sc-eQTL 1.30e-02 0.219 0.0874 0.422 Pro_T L2
ENSG00000112306 RPS12 219168 sc-eQTL 3.07e-01 -0.0343 0.0335 0.422 Pro_T L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 2.79e-01 0.0941 0.0867 0.422 Pro_T L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 9.84e-01 -0.00195 0.0952 0.425 Treg L2
ENSG00000079950 STX7 520539 sc-eQTL 7.42e-01 -0.0296 0.0898 0.425 Treg L2
ENSG00000112303 VNN2 270278 sc-eQTL 8.93e-01 0.0101 0.0755 0.425 Treg L2
ENSG00000112306 RPS12 219168 sc-eQTL 7.87e-01 -0.00905 0.0334 0.425 Treg L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 9.54e-01 -0.0054 0.0944 0.425 Treg L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 6.09e-01 -0.0504 0.0984 0.424 cDC L2
ENSG00000079950 STX7 520539 sc-eQTL 2.00e-01 0.0989 0.077 0.424 cDC L2
ENSG00000093134 VNN3 298972 sc-eQTL 3.61e-01 -0.0702 0.0766 0.424 cDC L2
ENSG00000112299 VNN1 319682 sc-eQTL 9.55e-01 0.00512 0.0903 0.424 cDC L2
ENSG00000112303 VNN2 270278 sc-eQTL 6.77e-02 -0.16 0.0872 0.424 cDC L2
ENSG00000112306 RPS12 219168 sc-eQTL 9.76e-01 0.0013 0.0434 0.424 cDC L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 1.57e-01 -0.122 0.0856 0.424 cDC L2
ENSG00000286438 AL591115.1 -69391 sc-eQTL 6.24e-01 0.0337 0.0687 0.424 cDC L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 9.97e-02 -0.13 0.0785 0.425 cMono_IL1B L2
ENSG00000079950 STX7 520539 sc-eQTL 2.52e-02 0.134 0.0593 0.425 cMono_IL1B L2
ENSG00000093134 VNN3 298972 sc-eQTL 4.77e-01 -0.0603 0.0847 0.425 cMono_IL1B L2
ENSG00000112299 VNN1 319682 sc-eQTL 9.74e-01 -0.00284 0.0855 0.425 cMono_IL1B L2
ENSG00000112303 VNN2 270278 sc-eQTL 5.58e-01 -0.0401 0.0683 0.425 cMono_IL1B L2
ENSG00000112306 RPS12 219168 sc-eQTL 4.00e-01 0.032 0.0379 0.425 cMono_IL1B L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 3.22e-01 0.0726 0.0731 0.425 cMono_IL1B L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 6.99e-01 0.0348 0.09 0.425 cMono_S100A L2
ENSG00000079950 STX7 520539 sc-eQTL 1.82e-02 0.153 0.0642 0.425 cMono_S100A L2
ENSG00000093134 VNN3 298972 sc-eQTL 9.20e-01 0.00817 0.0812 0.425 cMono_S100A L2
ENSG00000112299 VNN1 319682 sc-eQTL 6.45e-01 0.0407 0.0881 0.425 cMono_S100A L2
ENSG00000112303 VNN2 270278 sc-eQTL 8.92e-01 -0.00786 0.0578 0.425 cMono_S100A L2
ENSG00000112306 RPS12 219168 sc-eQTL 1.66e-01 0.0576 0.0414 0.425 cMono_S100A L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 2.40e-01 -0.0904 0.0767 0.425 cMono_S100A L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 9.95e-01 -0.000814 0.118 0.415 gdT L2
ENSG00000079950 STX7 520539 sc-eQTL 2.37e-01 0.12 0.101 0.415 gdT L2
ENSG00000112303 VNN2 270278 sc-eQTL 6.25e-02 -0.208 0.111 0.415 gdT L2
ENSG00000112306 RPS12 219168 sc-eQTL 6.37e-01 0.0202 0.0427 0.415 gdT L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 3.02e-01 0.114 0.11 0.415 gdT L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 9.98e-01 0.000194 0.0907 0.424 intMono L2
ENSG00000079950 STX7 520539 sc-eQTL 2.69e-01 0.0957 0.0864 0.424 intMono L2
ENSG00000093134 VNN3 298972 sc-eQTL 4.65e-01 0.064 0.0873 0.424 intMono L2
ENSG00000112299 VNN1 319682 sc-eQTL 4.73e-01 0.0621 0.0864 0.424 intMono L2
ENSG00000112303 VNN2 270278 sc-eQTL 2.16e-02 -0.201 0.0867 0.424 intMono L2
ENSG00000112306 RPS12 219168 sc-eQTL 4.35e-01 0.0299 0.0382 0.424 intMono L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 4.90e-01 -0.0644 0.093 0.424 intMono L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 8.36e-01 -0.0198 0.0952 0.423 ncMono L2
ENSG00000079950 STX7 520539 sc-eQTL 6.39e-01 0.0302 0.0644 0.423 ncMono L2
ENSG00000093134 VNN3 298972 sc-eQTL 8.40e-01 0.0184 0.0909 0.423 ncMono L2
ENSG00000112299 VNN1 319682 sc-eQTL 2.52e-01 0.103 0.0899 0.423 ncMono L2
ENSG00000112303 VNN2 270278 sc-eQTL 8.10e-01 0.0208 0.0867 0.423 ncMono L2
ENSG00000112306 RPS12 219168 sc-eQTL 9.71e-01 -0.0016 0.0435 0.423 ncMono L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 2.33e-01 0.0916 0.0766 0.423 ncMono L2
ENSG00000028839 TBPL1 -918433 sc-eQTL 7.48e-01 -0.0358 0.111 0.435 pDC L2
ENSG00000079950 STX7 520539 sc-eQTL 6.95e-01 0.0291 0.074 0.435 pDC L2
ENSG00000093134 VNN3 298972 sc-eQTL 8.00e-02 -0.13 0.0738 0.435 pDC L2
ENSG00000112299 VNN1 319682 sc-eQTL 3.96e-01 -0.0645 0.0757 0.435 pDC L2
ENSG00000112303 VNN2 270278 sc-eQTL 6.03e-01 -0.047 0.0903 0.435 pDC L2
ENSG00000112306 RPS12 219168 sc-eQTL 8.63e-01 0.0108 0.0622 0.435 pDC L2
ENSG00000146409 SLC18B1 220398 sc-eQTL 2.92e-02 0.2 0.0907 0.435 pDC L2
ENSG00000286438 AL591115.1 -69391 sc-eQTL 6.47e-02 0.162 0.0872 0.435 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -918433 sc-eQTL 7.49e-01 0.0301 0.094 0.425 B_Memory LOneK1K
ENSG00000079931 MOXD1 632262 sc-eQTL 3.24e-01 0.0901 0.0912 0.425 B_Memory LOneK1K
ENSG00000079950 STX7 520539 sc-eQTL 3.75e-04 0.182 0.0502 0.425 B_Memory LOneK1K
ENSG00000112303 VNN2 270278 sc-eQTL 8.09e-01 -0.0198 0.0819 0.425 B_Memory LOneK1K
ENSG00000112306 RPS12 219168 sc-eQTL 7.43e-01 -0.0153 0.0467 0.425 B_Memory LOneK1K
ENSG00000146409 SLC18B1 220398 sc-eQTL 1.18e-01 -0.134 0.0852 0.425 B_Memory LOneK1K
ENSG00000228495 LINC01013 901849 sc-eQTL 7.33e-01 -0.0282 0.0826 0.425 B_Memory LOneK1K
ENSG00000028839 TBPL1 -918433 sc-eQTL 4.97e-02 -0.175 0.0885 0.425 B_Naive LOneK1K
ENSG00000079931 MOXD1 632262 sc-eQTL 6.11e-01 0.0499 0.098 0.425 B_Naive LOneK1K
ENSG00000079950 STX7 520539 sc-eQTL 2.61e-01 0.0453 0.0401 0.425 B_Naive LOneK1K
ENSG00000112303 VNN2 270278 sc-eQTL 3.66e-01 -0.0706 0.078 0.425 B_Naive LOneK1K
ENSG00000112306 RPS12 219168 sc-eQTL 9.45e-01 -0.00325 0.0473 0.425 B_Naive LOneK1K
ENSG00000146409 SLC18B1 220398 sc-eQTL 6.15e-01 -0.0449 0.0892 0.425 B_Naive LOneK1K
ENSG00000228495 LINC01013 901849 sc-eQTL 2.03e-01 0.072 0.0565 0.425 B_Naive LOneK1K
ENSG00000028839 TBPL1 -918433 sc-eQTL 3.68e-01 -0.065 0.072 0.425 CD14_Mono LOneK1K
ENSG00000079950 STX7 520539 sc-eQTL 6.29e-03 0.136 0.0493 0.425 CD14_Mono LOneK1K
ENSG00000093134 VNN3 298972 sc-eQTL 4.88e-01 -0.0567 0.0816 0.425 CD14_Mono LOneK1K
ENSG00000112299 VNN1 319682 sc-eQTL 9.57e-01 -0.00455 0.0853 0.425 CD14_Mono LOneK1K
ENSG00000112303 VNN2 270278 sc-eQTL 6.75e-01 -0.0236 0.0563 0.425 CD14_Mono LOneK1K
ENSG00000112306 RPS12 219168 sc-eQTL 1.89e-01 0.0507 0.0385 0.425 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 220398 sc-eQTL 9.71e-01 0.00253 0.0688 0.425 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -918433 sc-eQTL 8.99e-01 -0.0116 0.0918 0.425 CD16_Mono LOneK1K
ENSG00000079950 STX7 520539 sc-eQTL 4.19e-01 0.0489 0.0604 0.425 CD16_Mono LOneK1K
ENSG00000093134 VNN3 298972 sc-eQTL 8.38e-02 0.154 0.0884 0.425 CD16_Mono LOneK1K
ENSG00000112299 VNN1 319682 sc-eQTL 3.02e-01 0.0911 0.088 0.425 CD16_Mono LOneK1K
ENSG00000112303 VNN2 270278 sc-eQTL 7.78e-01 0.0235 0.0832 0.425 CD16_Mono LOneK1K
ENSG00000112306 RPS12 219168 sc-eQTL 7.78e-01 -0.00999 0.0353 0.425 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 220398 sc-eQTL 9.23e-01 0.00832 0.0857 0.425 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -918433 sc-eQTL 7.30e-01 -0.0254 0.0736 0.425 NK_CD56dim LOneK1K
ENSG00000079950 STX7 520539 sc-eQTL 6.37e-03 0.187 0.068 0.425 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 270278 sc-eQTL 1.88e-01 0.115 0.0872 0.425 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 219168 sc-eQTL 2.09e-01 -0.0448 0.0356 0.425 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000028839 TBPL1 -918433 eQTL 0.0132 -0.0335 0.0135 0.00112 0.0 0.395
ENSG00000093134 VNN3 298972 eQTL 0.017 -0.0364 0.0152 0.0 0.0 0.395
ENSG00000112299 VNN1 319682 pQTL 5.18e-05 0.149 0.0366 0.0 0.0 0.402
ENSG00000112299 VNN1 319682 eQTL 1.13e-07 0.12 0.0224 0.0 0.0 0.395
ENSG00000112303 VNN2 270278 pQTL 4.92e-05 -0.107 0.0264 0.0 0.0 0.402
ENSG00000112303 VNN2 270278 eQTL 0.0497 -0.0266 0.0135 0.0 0.0 0.395
ENSG00000146409 SLC18B1 220398 eQTL 0.0446 0.0468 0.0233 0.0 0.0 0.395
ENSG00000234484 AL032821.1 281062 eQTL 8.72e-06 0.144 0.0322 0.0 0.0 0.395

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000093134 VNN3 298972 1.24e-06 9.35e-07 2.41e-07 4.03e-07 1.96e-07 3.32e-07 1.07e-06 3.45e-07 1.13e-06 3.24e-07 1.33e-06 5.6e-07 1.62e-06 2.54e-07 4.43e-07 6.35e-07 7.79e-07 5.71e-07 4e-07 4.25e-07 2.93e-07 9.46e-07 7.63e-07 5.25e-07 1.92e-06 2.94e-07 6.16e-07 5.8e-07 9.65e-07 9.73e-07 5.3e-07 4.57e-08 1.34e-07 4.16e-07 3.52e-07 3.59e-07 3.79e-07 1.14e-07 1.46e-07 8.76e-08 2.89e-07 1.5e-06 6.11e-08 1.28e-08 1.7e-07 6.12e-08 1.73e-07 5.73e-08 5.32e-08
ENSG00000112299 VNN1 319682 1.25e-06 9.09e-07 1.59e-07 3.43e-07 1.4e-07 3.41e-07 8.39e-07 2.65e-07 9.42e-07 2.72e-07 1.15e-06 5.81e-07 1.46e-06 2.09e-07 4.12e-07 5.29e-07 6.29e-07 5.27e-07 3.3e-07 3.34e-07 2.62e-07 7.26e-07 6.11e-07 4.09e-07 1.69e-06 2.48e-07 5.24e-07 4.96e-07 8.4e-07 9.08e-07 4.65e-07 3.34e-08 1.04e-07 2.97e-07 3.22e-07 2.94e-07 2.9e-07 1.21e-07 1.24e-07 3.01e-08 2.86e-07 1.26e-06 5.44e-08 1.22e-08 1.89e-07 4.23e-08 1.43e-07 3.05e-08 6.03e-08
ENSG00000112303 VNN2 270278 1.25e-06 9.82e-07 2.81e-07 7e-07 2.71e-07 4.39e-07 1.32e-06 3.38e-07 1.28e-06 3.71e-07 1.39e-06 6.08e-07 1.97e-06 2.78e-07 4.19e-07 8.25e-07 7.74e-07 5.88e-07 5.26e-07 6.44e-07 3.99e-07 1.19e-06 9.29e-07 6.28e-07 2.05e-06 3.71e-07 6.91e-07 7.59e-07 1.28e-06 1.21e-06 6.16e-07 6.15e-08 2.29e-07 5.82e-07 4.34e-07 4.66e-07 4.73e-07 1.56e-07 2.94e-07 2.48e-07 2.83e-07 1.43e-06 5.54e-08 3.38e-08 1.74e-07 8.76e-08 1.9e-07 8.82e-08 8.38e-08
ENSG00000234484 AL032821.1 281062 1.29e-06 9.23e-07 3e-07 5.92e-07 2.46e-07 4.08e-07 1.18e-06 3.31e-07 1.2e-06 3.76e-07 1.35e-06 5.93e-07 1.99e-06 2.54e-07 4.28e-07 7.41e-07 7.7e-07 5.57e-07 4.54e-07 5.57e-07 3.61e-07 1.12e-06 8.26e-07 5.6e-07 1.94e-06 3.17e-07 6.53e-07 7.25e-07 1.15e-06 1.08e-06 5.45e-07 3.86e-08 1.78e-07 5.42e-07 3.92e-07 4.34e-07 4.74e-07 1.41e-07 2.19e-07 1.54e-07 2.89e-07 1.5e-06 6.75e-08 2.64e-08 1.81e-07 7.5e-08 1.8e-07 8.34e-08 6.51e-08