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Genes within 1Mb (chr6:132988578:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -963592 sc-eQTL 3.34e-01 -0.0845 0.0872 0.453 B L1
ENSG00000079931 MOXD1 587103 sc-eQTL 1.48e-01 0.133 0.0919 0.453 B L1
ENSG00000079950 STX7 475380 sc-eQTL 8.79e-02 0.0593 0.0346 0.453 B L1
ENSG00000112303 VNN2 225119 sc-eQTL 7.69e-01 0.0192 0.0655 0.453 B L1
ENSG00000112306 RPS12 174009 sc-eQTL 3.82e-01 0.0346 0.0395 0.453 B L1
ENSG00000146409 SLC18B1 175239 sc-eQTL 2.81e-01 -0.0898 0.0831 0.453 B L1
ENSG00000228495 LINC01013 856690 sc-eQTL 2.09e-01 0.0686 0.0545 0.453 B L1
ENSG00000028839 TBPL1 -963592 sc-eQTL 5.68e-01 0.0369 0.0645 0.453 CD4T L1
ENSG00000079950 STX7 475380 sc-eQTL 2.01e-01 0.0858 0.0669 0.453 CD4T L1
ENSG00000112303 VNN2 225119 sc-eQTL 5.66e-01 0.0334 0.0581 0.453 CD4T L1
ENSG00000112306 RPS12 174009 sc-eQTL 8.44e-01 0.00781 0.0395 0.453 CD4T L1
ENSG00000146409 SLC18B1 175239 sc-eQTL 5.16e-01 -0.052 0.0799 0.453 CD4T L1
ENSG00000028839 TBPL1 -963592 sc-eQTL 8.75e-01 0.00991 0.0629 0.453 CD8T L1
ENSG00000079950 STX7 475380 sc-eQTL 2.28e-02 0.149 0.0648 0.453 CD8T L1
ENSG00000112303 VNN2 225119 sc-eQTL 2.59e-02 0.17 0.0757 0.453 CD8T L1
ENSG00000112306 RPS12 174009 sc-eQTL 5.19e-01 0.0169 0.0262 0.453 CD8T L1
ENSG00000146409 SLC18B1 175239 sc-eQTL 3.05e-01 -0.0812 0.079 0.453 CD8T L1
ENSG00000028839 TBPL1 -963592 sc-eQTL 3.78e-01 -0.0845 0.0957 0.455 DC L1
ENSG00000079950 STX7 475380 sc-eQTL 1.97e-01 0.0768 0.0593 0.455 DC L1
ENSG00000093134 VNN3 253813 sc-eQTL 9.65e-02 -0.122 0.0733 0.455 DC L1
ENSG00000112299 VNN1 274523 sc-eQTL 4.94e-01 -0.0546 0.0796 0.455 DC L1
ENSG00000112303 VNN2 225119 sc-eQTL 3.42e-01 -0.081 0.0851 0.455 DC L1
ENSG00000112306 RPS12 174009 sc-eQTL 5.52e-01 0.0284 0.0478 0.455 DC L1
ENSG00000146409 SLC18B1 175239 sc-eQTL 1.87e-01 0.0999 0.0754 0.455 DC L1
ENSG00000286438 AL591115.1 -114550 sc-eQTL 7.65e-02 0.122 0.0683 0.455 DC L1
ENSG00000028839 TBPL1 -963592 sc-eQTL 2.21e-01 -0.0846 0.0689 0.453 Mono L1
ENSG00000079950 STX7 475380 sc-eQTL 9.44e-03 0.119 0.0456 0.453 Mono L1
ENSG00000093134 VNN3 253813 sc-eQTL 8.89e-01 0.0111 0.0795 0.453 Mono L1
ENSG00000112299 VNN1 274523 sc-eQTL 6.49e-01 0.039 0.0855 0.453 Mono L1
ENSG00000112303 VNN2 225119 sc-eQTL 7.32e-01 0.0207 0.0603 0.453 Mono L1
ENSG00000112306 RPS12 174009 sc-eQTL 2.10e-01 0.0453 0.036 0.453 Mono L1
ENSG00000146409 SLC18B1 175239 sc-eQTL 8.40e-01 0.0144 0.0715 0.453 Mono L1
ENSG00000028839 TBPL1 -963592 sc-eQTL 1.97e-01 -0.0946 0.073 0.453 NK L1
ENSG00000079950 STX7 475380 sc-eQTL 3.29e-02 0.144 0.067 0.453 NK L1
ENSG00000112303 VNN2 225119 sc-eQTL 1.39e-01 0.125 0.0839 0.453 NK L1
ENSG00000112306 RPS12 174009 sc-eQTL 2.71e-01 -0.0384 0.0348 0.453 NK L1
ENSG00000028839 TBPL1 -963592 sc-eQTL 5.49e-01 -0.0515 0.0858 0.453 Other_T L1
ENSG00000079950 STX7 475380 sc-eQTL 5.02e-01 0.0454 0.0675 0.453 Other_T L1
ENSG00000112303 VNN2 225119 sc-eQTL 6.58e-01 -0.0362 0.0817 0.453 Other_T L1
ENSG00000112306 RPS12 174009 sc-eQTL 2.89e-01 -0.0344 0.0323 0.453 Other_T L1
ENSG00000146409 SLC18B1 175239 sc-eQTL 7.50e-01 0.0283 0.0887 0.453 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -963592 sc-eQTL 1.16e-01 -0.163 0.103 0.444 B_Activated L2
ENSG00000079931 MOXD1 587103 sc-eQTL 2.60e-01 0.107 0.0945 0.444 B_Activated L2
ENSG00000079950 STX7 475380 sc-eQTL 1.16e-02 0.223 0.0873 0.444 B_Activated L2
ENSG00000112303 VNN2 225119 sc-eQTL 9.59e-02 -0.157 0.0939 0.444 B_Activated L2
ENSG00000112306 RPS12 174009 sc-eQTL 7.52e-01 0.016 0.0507 0.444 B_Activated L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 4.20e-01 0.0717 0.0887 0.444 B_Activated L2
ENSG00000228495 LINC01013 856690 sc-eQTL 1.05e-01 0.137 0.0841 0.444 B_Activated L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 8.63e-01 0.0167 0.0967 0.453 B_Intermediate L2
ENSG00000079931 MOXD1 587103 sc-eQTL 6.85e-01 -0.0345 0.0849 0.453 B_Intermediate L2
ENSG00000079950 STX7 475380 sc-eQTL 5.39e-02 0.107 0.0551 0.453 B_Intermediate L2
ENSG00000112303 VNN2 225119 sc-eQTL 4.04e-01 0.0699 0.0835 0.453 B_Intermediate L2
ENSG00000112306 RPS12 174009 sc-eQTL 7.33e-01 -0.0175 0.0512 0.453 B_Intermediate L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 1.20e-01 -0.143 0.0918 0.453 B_Intermediate L2
ENSG00000228495 LINC01013 856690 sc-eQTL 3.45e-01 -0.0741 0.0783 0.453 B_Intermediate L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 4.62e-02 0.183 0.0914 0.453 B_Memory L2
ENSG00000079931 MOXD1 587103 sc-eQTL 1.28e-01 0.129 0.0847 0.453 B_Memory L2
ENSG00000079950 STX7 475380 sc-eQTL 6.31e-01 0.0321 0.0668 0.453 B_Memory L2
ENSG00000112303 VNN2 225119 sc-eQTL 8.54e-02 0.15 0.0867 0.453 B_Memory L2
ENSG00000112306 RPS12 174009 sc-eQTL 9.36e-01 0.00336 0.0421 0.453 B_Memory L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 3.54e-01 -0.0814 0.0877 0.453 B_Memory L2
ENSG00000228495 LINC01013 856690 sc-eQTL 5.93e-01 0.0438 0.0818 0.453 B_Memory L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 3.74e-01 -0.0777 0.0871 0.453 B_Naive1 L2
ENSG00000079931 MOXD1 587103 sc-eQTL 8.15e-01 0.0225 0.096 0.453 B_Naive1 L2
ENSG00000079950 STX7 475380 sc-eQTL 2.15e-01 0.052 0.0418 0.453 B_Naive1 L2
ENSG00000112303 VNN2 225119 sc-eQTL 8.96e-01 -0.0106 0.0815 0.453 B_Naive1 L2
ENSG00000112306 RPS12 174009 sc-eQTL 8.50e-01 -0.0088 0.0464 0.453 B_Naive1 L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 5.31e-01 0.0561 0.0894 0.453 B_Naive1 L2
ENSG00000228495 LINC01013 856690 sc-eQTL 1.23e-01 0.0912 0.0589 0.453 B_Naive1 L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 3.03e-01 -0.0952 0.0923 0.453 B_Naive2 L2
ENSG00000079931 MOXD1 587103 sc-eQTL 4.84e-01 0.0632 0.0901 0.453 B_Naive2 L2
ENSG00000079950 STX7 475380 sc-eQTL 8.24e-02 0.0851 0.0488 0.453 B_Naive2 L2
ENSG00000112303 VNN2 225119 sc-eQTL 6.40e-01 -0.0422 0.0902 0.453 B_Naive2 L2
ENSG00000112306 RPS12 174009 sc-eQTL 9.82e-01 -0.00107 0.0478 0.453 B_Naive2 L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 3.67e-01 -0.0822 0.0909 0.453 B_Naive2 L2
ENSG00000228495 LINC01013 856690 sc-eQTL 5.84e-01 0.0346 0.0631 0.453 B_Naive2 L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 9.51e-01 -0.0056 0.0908 0.459 CD4_CTL L2
ENSG00000079950 STX7 475380 sc-eQTL 7.70e-01 -0.0264 0.0901 0.459 CD4_CTL L2
ENSG00000112303 VNN2 225119 sc-eQTL 7.84e-03 0.24 0.0893 0.459 CD4_CTL L2
ENSG00000112306 RPS12 174009 sc-eQTL 5.81e-01 -0.0232 0.042 0.459 CD4_CTL L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 8.99e-01 -0.0107 0.0847 0.459 CD4_CTL L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 4.46e-01 0.0566 0.0741 0.453 CD4_Naive L2
ENSG00000079950 STX7 475380 sc-eQTL 7.27e-01 0.0255 0.0727 0.453 CD4_Naive L2
ENSG00000112303 VNN2 225119 sc-eQTL 9.75e-01 -0.00213 0.0674 0.453 CD4_Naive L2
ENSG00000112306 RPS12 174009 sc-eQTL 9.32e-01 -0.00374 0.0437 0.453 CD4_Naive L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 6.49e-01 -0.0384 0.0841 0.453 CD4_Naive L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 9.85e-01 -0.00145 0.079 0.453 CD4_TCM L2
ENSG00000079950 STX7 475380 sc-eQTL 1.11e-01 0.126 0.079 0.453 CD4_TCM L2
ENSG00000112303 VNN2 225119 sc-eQTL 1.68e-01 0.108 0.078 0.453 CD4_TCM L2
ENSG00000112306 RPS12 174009 sc-eQTL 9.77e-01 0.00119 0.0406 0.453 CD4_TCM L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 1.86e-01 -0.124 0.0937 0.453 CD4_TCM L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 5.78e-01 0.0504 0.0906 0.453 CD4_TEM L2
ENSG00000079950 STX7 475380 sc-eQTL 3.01e-01 0.0939 0.0905 0.453 CD4_TEM L2
ENSG00000112303 VNN2 225119 sc-eQTL 9.19e-02 -0.146 0.0865 0.453 CD4_TEM L2
ENSG00000112306 RPS12 174009 sc-eQTL 7.28e-01 -0.0124 0.0357 0.453 CD4_TEM L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 4.25e-01 -0.0708 0.0886 0.453 CD4_TEM L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 1.46e-01 -0.116 0.0798 0.453 CD8_CTL L2
ENSG00000079950 STX7 475380 sc-eQTL 4.10e-01 0.0617 0.0749 0.453 CD8_CTL L2
ENSG00000112303 VNN2 225119 sc-eQTL 6.18e-03 0.231 0.0837 0.453 CD8_CTL L2
ENSG00000112306 RPS12 174009 sc-eQTL 3.71e-01 -0.0408 0.0455 0.453 CD8_CTL L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 7.50e-01 -0.0282 0.0883 0.453 CD8_CTL L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 6.25e-01 0.0418 0.0853 0.453 CD8_Naive L2
ENSG00000079950 STX7 475380 sc-eQTL 6.89e-02 0.165 0.0903 0.453 CD8_Naive L2
ENSG00000112303 VNN2 225119 sc-eQTL 1.90e-01 0.103 0.0782 0.453 CD8_Naive L2
ENSG00000112306 RPS12 174009 sc-eQTL 7.51e-01 0.0143 0.0449 0.453 CD8_Naive L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 1.06e-01 -0.145 0.0896 0.453 CD8_Naive L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 6.83e-01 0.0395 0.0964 0.465 CD8_TCM L2
ENSG00000079950 STX7 475380 sc-eQTL 5.82e-01 0.0492 0.0892 0.465 CD8_TCM L2
ENSG00000112303 VNN2 225119 sc-eQTL 6.15e-01 0.0447 0.0886 0.465 CD8_TCM L2
ENSG00000112306 RPS12 174009 sc-eQTL 8.40e-01 0.00876 0.0432 0.465 CD8_TCM L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 3.28e-01 -0.0927 0.0944 0.465 CD8_TCM L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 8.35e-01 0.0185 0.0885 0.45 CD8_TEM L2
ENSG00000079950 STX7 475380 sc-eQTL 7.55e-01 0.0301 0.0966 0.45 CD8_TEM L2
ENSG00000112303 VNN2 225119 sc-eQTL 7.45e-01 0.0313 0.096 0.45 CD8_TEM L2
ENSG00000112306 RPS12 174009 sc-eQTL 2.48e-01 -0.0596 0.0515 0.45 CD8_TEM L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 5.43e-01 0.0595 0.0976 0.45 CD8_TEM L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 1.04e-01 -0.149 0.0911 0.457 MAIT L2
ENSG00000079950 STX7 475380 sc-eQTL 5.08e-01 -0.0577 0.087 0.457 MAIT L2
ENSG00000112303 VNN2 225119 sc-eQTL 1.09e-01 -0.141 0.088 0.457 MAIT L2
ENSG00000112306 RPS12 174009 sc-eQTL 9.40e-01 -0.00329 0.0436 0.457 MAIT L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 9.59e-01 0.00473 0.0913 0.457 MAIT L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 1.63e-01 -0.137 0.0979 0.458 NK_CD56bright L2
ENSG00000079950 STX7 475380 sc-eQTL 1.18e-01 -0.142 0.0906 0.458 NK_CD56bright L2
ENSG00000112303 VNN2 225119 sc-eQTL 9.19e-01 -0.00944 0.0926 0.458 NK_CD56bright L2
ENSG00000112306 RPS12 174009 sc-eQTL 3.58e-01 -0.0475 0.0515 0.458 NK_CD56bright L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 6.08e-02 -0.146 0.0774 0.453 NK_CD56dim L2
ENSG00000079950 STX7 475380 sc-eQTL 2.66e-03 0.213 0.07 0.453 NK_CD56dim L2
ENSG00000112303 VNN2 225119 sc-eQTL 6.46e-02 0.165 0.0887 0.453 NK_CD56dim L2
ENSG00000112306 RPS12 174009 sc-eQTL 6.52e-02 -0.0652 0.0352 0.453 NK_CD56dim L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 4.34e-01 -0.0762 0.0972 0.452 NK_HLA L2
ENSG00000079950 STX7 475380 sc-eQTL 1.66e-01 0.123 0.0881 0.452 NK_HLA L2
ENSG00000112303 VNN2 225119 sc-eQTL 4.83e-01 -0.0629 0.0895 0.452 NK_HLA L2
ENSG00000112306 RPS12 174009 sc-eQTL 4.04e-01 -0.0349 0.0417 0.452 NK_HLA L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 9.77e-01 -0.00238 0.0814 0.453 NK_cytokine L2
ENSG00000079950 STX7 475380 sc-eQTL 8.79e-01 -0.012 0.0788 0.453 NK_cytokine L2
ENSG00000112303 VNN2 225119 sc-eQTL 1.34e-01 0.133 0.0882 0.453 NK_cytokine L2
ENSG00000112306 RPS12 174009 sc-eQTL 2.82e-01 -0.0518 0.048 0.453 NK_cytokine L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 6.26e-01 0.0563 0.115 0.459 PB L2
ENSG00000079931 MOXD1 587103 sc-eQTL 3.55e-03 0.282 0.0945 0.459 PB L2
ENSG00000079950 STX7 475380 sc-eQTL 5.34e-01 0.0511 0.0819 0.459 PB L2
ENSG00000112303 VNN2 225119 sc-eQTL 5.49e-01 0.0601 0.1 0.459 PB L2
ENSG00000112306 RPS12 174009 sc-eQTL 7.18e-01 0.0206 0.0569 0.459 PB L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 8.84e-01 -0.0155 0.107 0.459 PB L2
ENSG00000228495 LINC01013 856690 sc-eQTL 9.87e-01 -0.0011 0.0701 0.459 PB L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 6.08e-01 0.0465 0.0906 0.45 Pro_T L2
ENSG00000079950 STX7 475380 sc-eQTL 8.96e-01 0.0106 0.081 0.45 Pro_T L2
ENSG00000112303 VNN2 225119 sc-eQTL 1.28e-02 0.215 0.0856 0.45 Pro_T L2
ENSG00000112306 RPS12 174009 sc-eQTL 2.76e-01 -0.0358 0.0328 0.45 Pro_T L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 5.05e-01 0.0568 0.085 0.45 Pro_T L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 4.66e-01 0.068 0.093 0.453 Treg L2
ENSG00000079950 STX7 475380 sc-eQTL 4.80e-01 -0.062 0.0877 0.453 Treg L2
ENSG00000112303 VNN2 225119 sc-eQTL 8.06e-01 0.0181 0.0739 0.453 Treg L2
ENSG00000112306 RPS12 174009 sc-eQTL 6.92e-01 -0.013 0.0327 0.453 Treg L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 8.40e-01 0.0186 0.0923 0.453 Treg L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 4.54e-01 -0.0724 0.0964 0.454 cDC L2
ENSG00000079950 STX7 475380 sc-eQTL 1.56e-01 0.107 0.0753 0.454 cDC L2
ENSG00000093134 VNN3 253813 sc-eQTL 1.01e-01 -0.123 0.0747 0.454 cDC L2
ENSG00000112299 VNN1 274523 sc-eQTL 7.72e-01 0.0257 0.0884 0.454 cDC L2
ENSG00000112303 VNN2 225119 sc-eQTL 8.44e-02 -0.148 0.0855 0.454 cDC L2
ENSG00000112306 RPS12 174009 sc-eQTL 9.19e-01 -0.00435 0.0426 0.454 cDC L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 8.71e-02 -0.144 0.0836 0.454 cDC L2
ENSG00000286438 AL591115.1 -114550 sc-eQTL 5.58e-01 0.0395 0.0673 0.454 cDC L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 6.97e-02 -0.14 0.077 0.453 cMono_IL1B L2
ENSG00000079950 STX7 475380 sc-eQTL 4.55e-02 0.117 0.0583 0.453 cMono_IL1B L2
ENSG00000093134 VNN3 253813 sc-eQTL 6.73e-01 -0.0352 0.0832 0.453 cMono_IL1B L2
ENSG00000112299 VNN1 274523 sc-eQTL 9.89e-01 -0.00112 0.084 0.453 cMono_IL1B L2
ENSG00000112303 VNN2 225119 sc-eQTL 7.27e-01 -0.0235 0.0671 0.453 cMono_IL1B L2
ENSG00000112306 RPS12 174009 sc-eQTL 6.49e-01 0.017 0.0373 0.453 cMono_IL1B L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 3.22e-01 0.0713 0.0718 0.453 cMono_IL1B L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 7.48e-01 0.0284 0.0882 0.453 cMono_S100A L2
ENSG00000079950 STX7 475380 sc-eQTL 6.95e-03 0.171 0.0626 0.453 cMono_S100A L2
ENSG00000093134 VNN3 253813 sc-eQTL 7.33e-01 0.0272 0.0795 0.453 cMono_S100A L2
ENSG00000112299 VNN1 274523 sc-eQTL 6.40e-01 0.0404 0.0863 0.453 cMono_S100A L2
ENSG00000112303 VNN2 225119 sc-eQTL 4.92e-01 0.0389 0.0565 0.453 cMono_S100A L2
ENSG00000112306 RPS12 174009 sc-eQTL 2.45e-01 0.0473 0.0406 0.453 cMono_S100A L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 1.94e-01 -0.0978 0.0751 0.453 cMono_S100A L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 9.55e-01 -0.00652 0.115 0.455 gdT L2
ENSG00000079950 STX7 475380 sc-eQTL 2.97e-01 0.103 0.0982 0.455 gdT L2
ENSG00000112303 VNN2 225119 sc-eQTL 9.69e-02 -0.18 0.108 0.455 gdT L2
ENSG00000112306 RPS12 174009 sc-eQTL 7.12e-01 0.0154 0.0415 0.455 gdT L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 1.43e-01 0.157 0.107 0.455 gdT L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 7.32e-01 -0.0305 0.0888 0.453 intMono L2
ENSG00000079950 STX7 475380 sc-eQTL 1.78e-01 0.114 0.0844 0.453 intMono L2
ENSG00000093134 VNN3 253813 sc-eQTL 2.84e-01 0.0917 0.0854 0.453 intMono L2
ENSG00000112299 VNN1 274523 sc-eQTL 5.45e-01 0.0513 0.0846 0.453 intMono L2
ENSG00000112303 VNN2 225119 sc-eQTL 1.11e-02 -0.217 0.0847 0.453 intMono L2
ENSG00000112306 RPS12 174009 sc-eQTL 8.61e-01 0.00658 0.0374 0.453 intMono L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 4.07e-01 -0.0757 0.091 0.453 intMono L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 8.17e-01 -0.0218 0.0941 0.45 ncMono L2
ENSG00000079950 STX7 475380 sc-eQTL 2.44e-01 0.0741 0.0634 0.45 ncMono L2
ENSG00000093134 VNN3 253813 sc-eQTL 9.03e-01 0.011 0.0898 0.45 ncMono L2
ENSG00000112299 VNN1 274523 sc-eQTL 4.50e-01 0.0673 0.089 0.45 ncMono L2
ENSG00000112303 VNN2 225119 sc-eQTL 5.75e-01 0.0482 0.0856 0.45 ncMono L2
ENSG00000112306 RPS12 174009 sc-eQTL 9.42e-01 0.00314 0.043 0.45 ncMono L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 1.85e-01 0.101 0.0756 0.45 ncMono L2
ENSG00000028839 TBPL1 -963592 sc-eQTL 9.79e-01 -0.00283 0.109 0.463 pDC L2
ENSG00000079950 STX7 475380 sc-eQTL 4.62e-01 0.0534 0.0724 0.463 pDC L2
ENSG00000093134 VNN3 253813 sc-eQTL 5.87e-02 -0.137 0.0721 0.463 pDC L2
ENSG00000112299 VNN1 274523 sc-eQTL 6.25e-01 -0.0363 0.0742 0.463 pDC L2
ENSG00000112303 VNN2 225119 sc-eQTL 9.23e-01 -0.00861 0.0884 0.463 pDC L2
ENSG00000112306 RPS12 174009 sc-eQTL 6.74e-01 0.0257 0.0609 0.463 pDC L2
ENSG00000146409 SLC18B1 175239 sc-eQTL 9.67e-03 0.231 0.0882 0.463 pDC L2
ENSG00000286438 AL591115.1 -114550 sc-eQTL 3.77e-02 0.178 0.0851 0.463 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -963592 sc-eQTL 6.54e-01 0.0417 0.0929 0.453 B_Memory LOneK1K
ENSG00000079931 MOXD1 587103 sc-eQTL 4.32e-01 0.0709 0.0901 0.453 B_Memory LOneK1K
ENSG00000079950 STX7 475380 sc-eQTL 3.71e-03 0.147 0.0501 0.453 B_Memory LOneK1K
ENSG00000112303 VNN2 225119 sc-eQTL 5.76e-01 0.0452 0.0808 0.453 B_Memory LOneK1K
ENSG00000112306 RPS12 174009 sc-eQTL 4.48e-01 -0.035 0.046 0.453 B_Memory LOneK1K
ENSG00000146409 SLC18B1 175239 sc-eQTL 8.90e-02 -0.144 0.084 0.453 B_Memory LOneK1K
ENSG00000228495 LINC01013 856690 sc-eQTL 4.72e-01 -0.0588 0.0815 0.453 B_Memory LOneK1K
ENSG00000028839 TBPL1 -963592 sc-eQTL 1.51e-01 -0.125 0.0868 0.453 B_Naive LOneK1K
ENSG00000079931 MOXD1 587103 sc-eQTL 4.91e-01 0.0659 0.0957 0.453 B_Naive LOneK1K
ENSG00000079950 STX7 475380 sc-eQTL 1.41e-01 0.0578 0.0391 0.453 B_Naive LOneK1K
ENSG00000112303 VNN2 225119 sc-eQTL 5.81e-01 -0.0421 0.0763 0.453 B_Naive LOneK1K
ENSG00000112306 RPS12 174009 sc-eQTL 9.48e-01 -0.00304 0.0462 0.453 B_Naive LOneK1K
ENSG00000146409 SLC18B1 175239 sc-eQTL 9.03e-01 -0.0106 0.0871 0.453 B_Naive LOneK1K
ENSG00000228495 LINC01013 856690 sc-eQTL 1.02e-01 0.0904 0.055 0.453 B_Naive LOneK1K
ENSG00000028839 TBPL1 -963592 sc-eQTL 2.41e-01 -0.0829 0.0705 0.453 CD14_Mono LOneK1K
ENSG00000079950 STX7 475380 sc-eQTL 8.57e-03 0.128 0.0484 0.453 CD14_Mono LOneK1K
ENSG00000093134 VNN3 253813 sc-eQTL 7.20e-01 -0.0287 0.0801 0.453 CD14_Mono LOneK1K
ENSG00000112299 VNN1 274523 sc-eQTL 9.27e-01 -0.00771 0.0836 0.453 CD14_Mono LOneK1K
ENSG00000112303 VNN2 225119 sc-eQTL 9.90e-01 -0.000667 0.0553 0.453 CD14_Mono LOneK1K
ENSG00000112306 RPS12 174009 sc-eQTL 3.34e-01 0.0366 0.0378 0.453 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 175239 sc-eQTL 9.95e-01 -0.000398 0.0674 0.453 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -963592 sc-eQTL 6.60e-01 -0.0396 0.0899 0.453 CD16_Mono LOneK1K
ENSG00000079950 STX7 475380 sc-eQTL 1.65e-01 0.0824 0.0591 0.453 CD16_Mono LOneK1K
ENSG00000093134 VNN3 253813 sc-eQTL 5.09e-02 0.17 0.0865 0.453 CD16_Mono LOneK1K
ENSG00000112299 VNN1 274523 sc-eQTL 3.48e-01 0.0812 0.0863 0.453 CD16_Mono LOneK1K
ENSG00000112303 VNN2 225119 sc-eQTL 7.84e-01 0.0224 0.0816 0.453 CD16_Mono LOneK1K
ENSG00000112306 RPS12 174009 sc-eQTL 8.15e-01 -0.00813 0.0346 0.453 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 175239 sc-eQTL 8.78e-01 0.0129 0.084 0.453 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -963592 sc-eQTL 7.00e-02 -0.131 0.0718 0.453 NK_CD56dim LOneK1K
ENSG00000079950 STX7 475380 sc-eQTL 8.97e-03 0.176 0.0669 0.453 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 225119 sc-eQTL 9.76e-02 0.142 0.0855 0.453 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 174009 sc-eQTL 3.98e-01 -0.0297 0.0351 0.453 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 274523 pQTL 0.00119 0.118 0.0362 0.0 0.0 0.436
ENSG00000112299 VNN1 274523 eQTL 1.78e-05 0.0954 0.0221 0.0 0.0 0.432
ENSG00000112303 VNN2 225119 pQTL 0.000605 -0.0896 0.0261 0.0 0.0 0.436
ENSG00000112303 VNN2 225119 eQTL 0.0229 -0.0303 0.0133 0.0 0.0 0.432
ENSG00000234484 AL032821.1 235903 eQTL 0.00022 0.118 0.0318 0.0 0.0 0.432

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079950 \N 475380 5.37e-07 2.67e-07 6.57e-08 2.57e-07 1.06e-07 1.25e-07 3.57e-07 7.56e-08 2.38e-07 1.37e-07 2.98e-07 2.11e-07 4.74e-07 8.55e-08 7.98e-08 1.14e-07 8.64e-08 2.75e-07 7.53e-08 8.1e-08 1.39e-07 2.3e-07 2.2e-07 5.6e-08 4.11e-07 1.82e-07 1.39e-07 1.54e-07 1.6e-07 2.39e-07 1.78e-07 5.32e-08 4.74e-08 1.15e-07 1.31e-07 4.77e-08 5.76e-08 6.78e-08 4.9e-08 8.06e-08 3.46e-08 2.71e-07 3.35e-08 1.43e-08 4.36e-08 1.05e-08 8.21e-08 0.0 4.94e-08
ENSG00000112299 VNN1 274523 1.34e-06 9.25e-07 2.15e-07 5.65e-07 1.96e-07 4.43e-07 1.18e-06 3.34e-07 1.1e-06 3.82e-07 1.35e-06 6.06e-07 1.86e-06 2.72e-07 4.37e-07 6.36e-07 7.73e-07 5.48e-07 3.56e-07 5.57e-07 2.93e-07 9.92e-07 7.96e-07 5.84e-07 1.95e-06 2.9e-07 6.16e-07 5.65e-07 9.73e-07 1.13e-06 5.26e-07 3.9e-08 1.5e-07 5.21e-07 3.98e-07 3.16e-07 3.64e-07 1.41e-07 2.17e-07 4.17e-08 3.01e-07 1.48e-06 6.04e-08 1.23e-08 1.83e-07 7.43e-08 1.97e-07 8.08e-08 6.03e-08
ENSG00000112303 VNN2 225119 1.3e-06 1.08e-06 3.31e-07 1.17e-06 3.36e-07 6.36e-07 1.48e-06 3.56e-07 1.45e-06 5.06e-07 1.89e-06 7.63e-07 2.45e-06 2.89e-07 5.65e-07 9.14e-07 9.01e-07 7.21e-07 8.13e-07 6.36e-07 6.36e-07 1.72e-06 9.35e-07 5.57e-07 2.26e-06 4.39e-07 9.34e-07 7.45e-07 1.45e-06 1.21e-06 7.58e-07 2.05e-07 1.88e-07 6e-07 5.27e-07 4.47e-07 6.1e-07 2.03e-07 5.03e-07 2.91e-07 2.56e-07 1.64e-06 5.45e-08 4.22e-08 1.65e-07 1.38e-07 2.33e-07 8.37e-08 8.28e-08
ENSG00000234484 AL032821.1 235903 1.24e-06 1e-06 3.2e-07 1.11e-06 3.23e-07 5.63e-07 1.58e-06 3.52e-07 1.44e-06 4.31e-07 1.79e-06 7.32e-07 2.34e-06 2.96e-07 5.56e-07 8.25e-07 9.08e-07 6.91e-07 6.96e-07 6.4e-07 4.99e-07 1.56e-06 8.66e-07 6.25e-07 2.23e-06 4.32e-07 8.29e-07 7.08e-07 1.37e-06 1.25e-06 6.68e-07 1.73e-07 2.13e-07 6.93e-07 5.9e-07 4.67e-07 5.1e-07 1.54e-07 4.18e-07 2.51e-07 3.05e-07 1.63e-06 7.6e-08 3.4e-08 1.73e-07 1.3e-07 2.21e-07 7.81e-08 8.83e-08