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Genes within 1Mb (chr6:132957740:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -994430 sc-eQTL 3.80e-01 -0.083 0.0944 0.675 B L1
ENSG00000079931 MOXD1 556265 sc-eQTL 4.88e-01 0.0693 0.0998 0.675 B L1
ENSG00000079950 STX7 444542 sc-eQTL 5.33e-01 -0.0235 0.0376 0.675 B L1
ENSG00000112303 VNN2 194281 sc-eQTL 4.06e-01 0.0588 0.0707 0.675 B L1
ENSG00000112306 RPS12 143171 sc-eQTL 2.83e-01 0.046 0.0427 0.675 B L1
ENSG00000146409 SLC18B1 144401 sc-eQTL 1.15e-01 0.142 0.0896 0.675 B L1
ENSG00000228495 LINC01013 825852 sc-eQTL 8.48e-01 -0.0114 0.0591 0.675 B L1
ENSG00000028839 TBPL1 -994430 sc-eQTL 3.51e-01 0.0647 0.0692 0.675 CD4T L1
ENSG00000079950 STX7 444542 sc-eQTL 7.29e-01 0.025 0.0721 0.675 CD4T L1
ENSG00000112303 VNN2 194281 sc-eQTL 9.63e-01 -0.00292 0.0624 0.675 CD4T L1
ENSG00000112306 RPS12 143171 sc-eQTL 6.18e-02 0.079 0.0421 0.675 CD4T L1
ENSG00000146409 SLC18B1 144401 sc-eQTL 4.54e-02 0.171 0.085 0.675 CD4T L1
ENSG00000028839 TBPL1 -994430 sc-eQTL 6.18e-01 0.0346 0.0693 0.675 CD8T L1
ENSG00000079950 STX7 444542 sc-eQTL 7.08e-01 -0.0271 0.0724 0.675 CD8T L1
ENSG00000112303 VNN2 194281 sc-eQTL 1.80e-02 0.199 0.0834 0.675 CD8T L1
ENSG00000112306 RPS12 143171 sc-eQTL 2.42e-01 0.0338 0.0288 0.675 CD8T L1
ENSG00000146409 SLC18B1 144401 sc-eQTL 2.31e-01 0.105 0.087 0.675 CD8T L1
ENSG00000028839 TBPL1 -994430 sc-eQTL 5.68e-01 -0.0581 0.102 0.671 DC L1
ENSG00000079950 STX7 444542 sc-eQTL 1.75e-02 0.149 0.0623 0.671 DC L1
ENSG00000093134 VNN3 222975 sc-eQTL 3.51e-01 -0.0731 0.0782 0.671 DC L1
ENSG00000112299 VNN1 243685 sc-eQTL 3.35e-01 -0.0815 0.0844 0.671 DC L1
ENSG00000112303 VNN2 194281 sc-eQTL 7.53e-01 0.0285 0.0905 0.671 DC L1
ENSG00000112306 RPS12 143171 sc-eQTL 2.64e-01 0.0567 0.0506 0.671 DC L1
ENSG00000146409 SLC18B1 144401 sc-eQTL 8.25e-01 0.0178 0.0803 0.671 DC L1
ENSG00000286438 AL591115.1 -145388 sc-eQTL 8.93e-01 0.00988 0.0731 0.671 DC L1
ENSG00000028839 TBPL1 -994430 sc-eQTL 4.77e-01 0.0521 0.0731 0.675 Mono L1
ENSG00000079950 STX7 444542 sc-eQTL 5.72e-02 0.0928 0.0485 0.675 Mono L1
ENSG00000093134 VNN3 222975 sc-eQTL 9.30e-01 -0.00737 0.084 0.675 Mono L1
ENSG00000112299 VNN1 243685 sc-eQTL 6.25e-02 0.168 0.0897 0.675 Mono L1
ENSG00000112303 VNN2 194281 sc-eQTL 2.84e-01 0.0684 0.0636 0.675 Mono L1
ENSG00000112306 RPS12 143171 sc-eQTL 9.77e-01 0.00108 0.0382 0.675 Mono L1
ENSG00000146409 SLC18B1 144401 sc-eQTL 7.48e-01 0.0244 0.0756 0.675 Mono L1
ENSG00000028839 TBPL1 -994430 sc-eQTL 1.63e-01 -0.111 0.0789 0.674 NK L1
ENSG00000079950 STX7 444542 sc-eQTL 1.02e-01 0.12 0.0728 0.674 NK L1
ENSG00000112303 VNN2 194281 sc-eQTL 2.50e-01 0.105 0.0909 0.674 NK L1
ENSG00000112306 RPS12 143171 sc-eQTL 9.63e-01 -0.00176 0.0377 0.674 NK L1
ENSG00000028839 TBPL1 -994430 sc-eQTL 2.68e-01 -0.103 0.0925 0.675 Other_T L1
ENSG00000079950 STX7 444542 sc-eQTL 2.56e-01 -0.0828 0.0728 0.675 Other_T L1
ENSG00000112303 VNN2 194281 sc-eQTL 3.43e-01 0.0838 0.0881 0.675 Other_T L1
ENSG00000112306 RPS12 143171 sc-eQTL 1.95e-01 0.0454 0.0349 0.675 Other_T L1
ENSG00000146409 SLC18B1 144401 sc-eQTL 4.35e-01 0.0748 0.0957 0.675 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -994430 sc-eQTL 9.37e-01 0.00878 0.11 0.681 B_Activated L2
ENSG00000079931 MOXD1 556265 sc-eQTL 1.21e-01 0.156 0.1 0.681 B_Activated L2
ENSG00000079950 STX7 444542 sc-eQTL 7.09e-01 0.0353 0.0944 0.681 B_Activated L2
ENSG00000112303 VNN2 194281 sc-eQTL 7.64e-01 0.0303 0.101 0.681 B_Activated L2
ENSG00000112306 RPS12 143171 sc-eQTL 4.09e-01 0.0445 0.0538 0.681 B_Activated L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 9.23e-01 0.0091 0.0944 0.681 B_Activated L2
ENSG00000228495 LINC01013 825852 sc-eQTL 1.34e-01 0.135 0.0894 0.681 B_Activated L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 4.82e-01 0.0719 0.102 0.676 B_Intermediate L2
ENSG00000079931 MOXD1 556265 sc-eQTL 2.50e-01 0.103 0.0894 0.676 B_Intermediate L2
ENSG00000079950 STX7 444542 sc-eQTL 7.99e-01 0.015 0.0587 0.676 B_Intermediate L2
ENSG00000112303 VNN2 194281 sc-eQTL 4.09e-01 0.073 0.0882 0.676 B_Intermediate L2
ENSG00000112306 RPS12 143171 sc-eQTL 4.27e-01 0.043 0.054 0.676 B_Intermediate L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 8.20e-01 -0.0222 0.0975 0.676 B_Intermediate L2
ENSG00000228495 LINC01013 825852 sc-eQTL 2.34e-02 -0.187 0.0819 0.676 B_Intermediate L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 4.43e-01 0.0739 0.0962 0.675 B_Memory L2
ENSG00000079931 MOXD1 556265 sc-eQTL 8.79e-01 0.0135 0.0888 0.675 B_Memory L2
ENSG00000079950 STX7 444542 sc-eQTL 6.13e-01 -0.0352 0.0697 0.675 B_Memory L2
ENSG00000112303 VNN2 194281 sc-eQTL 4.73e-01 0.0654 0.091 0.675 B_Memory L2
ENSG00000112306 RPS12 143171 sc-eQTL 8.76e-01 0.00686 0.0439 0.675 B_Memory L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 5.66e-02 0.174 0.0909 0.675 B_Memory L2
ENSG00000228495 LINC01013 825852 sc-eQTL 8.79e-01 0.0131 0.0854 0.675 B_Memory L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 9.69e-01 0.00369 0.0945 0.675 B_Naive1 L2
ENSG00000079931 MOXD1 556265 sc-eQTL 6.18e-01 -0.0519 0.104 0.675 B_Naive1 L2
ENSG00000079950 STX7 444542 sc-eQTL 9.37e-01 0.00361 0.0454 0.675 B_Naive1 L2
ENSG00000112303 VNN2 194281 sc-eQTL 3.61e-01 -0.0805 0.088 0.675 B_Naive1 L2
ENSG00000112306 RPS12 143171 sc-eQTL 3.63e-01 0.0457 0.0501 0.675 B_Naive1 L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 9.07e-01 0.0114 0.0969 0.675 B_Naive1 L2
ENSG00000228495 LINC01013 825852 sc-eQTL 9.09e-01 -0.00736 0.0642 0.675 B_Naive1 L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 4.47e-01 -0.0747 0.098 0.676 B_Naive2 L2
ENSG00000079931 MOXD1 556265 sc-eQTL 2.40e-01 -0.112 0.0954 0.676 B_Naive2 L2
ENSG00000079950 STX7 444542 sc-eQTL 4.91e-01 -0.0359 0.0521 0.676 B_Naive2 L2
ENSG00000112303 VNN2 194281 sc-eQTL 4.02e-01 -0.0802 0.0955 0.676 B_Naive2 L2
ENSG00000112306 RPS12 143171 sc-eQTL 6.04e-01 0.0263 0.0506 0.676 B_Naive2 L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 1.14e-02 0.243 0.0952 0.676 B_Naive2 L2
ENSG00000228495 LINC01013 825852 sc-eQTL 2.92e-01 -0.0706 0.0668 0.676 B_Naive2 L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 7.60e-01 0.0298 0.0976 0.68 CD4_CTL L2
ENSG00000079950 STX7 444542 sc-eQTL 5.02e-01 -0.0652 0.0969 0.68 CD4_CTL L2
ENSG00000112303 VNN2 194281 sc-eQTL 9.63e-01 0.00454 0.0978 0.68 CD4_CTL L2
ENSG00000112306 RPS12 143171 sc-eQTL 1.64e-01 0.0628 0.045 0.68 CD4_CTL L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 5.83e-01 -0.05 0.0911 0.68 CD4_CTL L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 2.95e-01 0.0827 0.0787 0.675 CD4_Naive L2
ENSG00000079950 STX7 444542 sc-eQTL 8.29e-01 0.0168 0.0773 0.675 CD4_Naive L2
ENSG00000112303 VNN2 194281 sc-eQTL 8.53e-01 -0.0133 0.0717 0.675 CD4_Naive L2
ENSG00000112306 RPS12 143171 sc-eQTL 1.59e-01 0.0655 0.0463 0.675 CD4_Naive L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 3.28e-02 0.19 0.0885 0.675 CD4_Naive L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 5.22e-01 -0.0549 0.0857 0.675 CD4_TCM L2
ENSG00000079950 STX7 444542 sc-eQTL 5.70e-01 0.0491 0.0863 0.675 CD4_TCM L2
ENSG00000112303 VNN2 194281 sc-eQTL 8.32e-01 0.0181 0.0851 0.675 CD4_TCM L2
ENSG00000112306 RPS12 143171 sc-eQTL 1.38e-01 0.0653 0.0439 0.675 CD4_TCM L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 5.18e-01 0.0661 0.102 0.675 CD4_TCM L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 2.60e-01 0.11 0.097 0.675 CD4_TEM L2
ENSG00000079950 STX7 444542 sc-eQTL 6.87e-01 0.0393 0.0974 0.675 CD4_TEM L2
ENSG00000112303 VNN2 194281 sc-eQTL 4.86e-01 -0.0652 0.0934 0.675 CD4_TEM L2
ENSG00000112306 RPS12 143171 sc-eQTL 6.80e-02 0.0698 0.0381 0.675 CD4_TEM L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 6.37e-01 0.045 0.0953 0.675 CD4_TEM L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 3.24e-01 -0.0856 0.0866 0.675 CD8_CTL L2
ENSG00000079950 STX7 444542 sc-eQTL 1.97e-01 -0.105 0.0809 0.675 CD8_CTL L2
ENSG00000112303 VNN2 194281 sc-eQTL 1.61e-04 0.343 0.0892 0.675 CD8_CTL L2
ENSG00000112306 RPS12 143171 sc-eQTL 4.48e-01 0.0374 0.0493 0.675 CD8_CTL L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 7.08e-02 0.172 0.0949 0.675 CD8_CTL L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 5.88e-02 0.178 0.0935 0.675 CD8_Naive L2
ENSG00000079950 STX7 444542 sc-eQTL 1.74e-01 0.137 0.1 0.675 CD8_Naive L2
ENSG00000112303 VNN2 194281 sc-eQTL 3.16e-01 0.0869 0.0865 0.675 CD8_Naive L2
ENSG00000112306 RPS12 143171 sc-eQTL 1.33e-01 0.0745 0.0494 0.675 CD8_Naive L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 6.31e-01 0.0479 0.0995 0.675 CD8_Naive L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 9.82e-01 -0.00239 0.106 0.685 CD8_TCM L2
ENSG00000079950 STX7 444542 sc-eQTL 3.98e-01 -0.0828 0.0976 0.685 CD8_TCM L2
ENSG00000112303 VNN2 194281 sc-eQTL 4.80e-01 0.0686 0.0969 0.685 CD8_TCM L2
ENSG00000112306 RPS12 143171 sc-eQTL 2.16e-02 0.108 0.0467 0.685 CD8_TCM L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 2.37e-01 -0.123 0.103 0.685 CD8_TCM L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 8.11e-01 0.0219 0.0917 0.676 CD8_TEM L2
ENSG00000079950 STX7 444542 sc-eQTL 4.21e-01 0.0807 0.0999 0.676 CD8_TEM L2
ENSG00000112303 VNN2 194281 sc-eQTL 3.74e-01 0.0885 0.0993 0.676 CD8_TEM L2
ENSG00000112306 RPS12 143171 sc-eQTL 4.09e-01 0.0443 0.0535 0.676 CD8_TEM L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 1.20e-01 0.157 0.101 0.676 CD8_TEM L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 6.50e-01 -0.0443 0.0973 0.675 MAIT L2
ENSG00000079950 STX7 444542 sc-eQTL 1.19e-01 -0.144 0.0919 0.675 MAIT L2
ENSG00000112303 VNN2 194281 sc-eQTL 2.57e-01 -0.107 0.0938 0.675 MAIT L2
ENSG00000112306 RPS12 143171 sc-eQTL 4.52e-02 0.0923 0.0458 0.675 MAIT L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 6.53e-01 -0.0436 0.0969 0.675 MAIT L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 4.07e-01 -0.0851 0.102 0.673 NK_CD56bright L2
ENSG00000079950 STX7 444542 sc-eQTL 6.27e-01 0.0462 0.0951 0.673 NK_CD56bright L2
ENSG00000112303 VNN2 194281 sc-eQTL 1.45e-01 0.141 0.0961 0.673 NK_CD56bright L2
ENSG00000112306 RPS12 143171 sc-eQTL 4.13e-01 0.0441 0.0538 0.673 NK_CD56bright L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 1.10e-01 -0.134 0.0834 0.675 NK_CD56dim L2
ENSG00000079950 STX7 444542 sc-eQTL 1.75e-01 0.104 0.0765 0.675 NK_CD56dim L2
ENSG00000112303 VNN2 194281 sc-eQTL 1.97e-01 0.124 0.0957 0.675 NK_CD56dim L2
ENSG00000112306 RPS12 143171 sc-eQTL 7.17e-01 -0.0138 0.0381 0.675 NK_CD56dim L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 5.49e-01 0.0616 0.103 0.669 NK_HLA L2
ENSG00000079950 STX7 444542 sc-eQTL 4.98e-01 0.0635 0.0935 0.669 NK_HLA L2
ENSG00000112303 VNN2 194281 sc-eQTL 6.87e-01 0.0382 0.0948 0.669 NK_HLA L2
ENSG00000112306 RPS12 143171 sc-eQTL 2.56e-01 -0.0501 0.044 0.669 NK_HLA L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 7.06e-01 -0.0335 0.0886 0.675 NK_cytokine L2
ENSG00000079950 STX7 444542 sc-eQTL 5.60e-01 0.0501 0.0858 0.675 NK_cytokine L2
ENSG00000112303 VNN2 194281 sc-eQTL 2.62e-01 0.108 0.0962 0.675 NK_cytokine L2
ENSG00000112306 RPS12 143171 sc-eQTL 3.14e-01 -0.0527 0.0523 0.675 NK_cytokine L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 4.40e-01 -0.097 0.125 0.685 PB L2
ENSG00000079931 MOXD1 556265 sc-eQTL 3.53e-01 0.0994 0.107 0.685 PB L2
ENSG00000079950 STX7 444542 sc-eQTL 3.18e-01 -0.0892 0.089 0.685 PB L2
ENSG00000112303 VNN2 194281 sc-eQTL 6.58e-01 -0.0484 0.109 0.685 PB L2
ENSG00000112306 RPS12 143171 sc-eQTL 6.07e-01 -0.032 0.0619 0.685 PB L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 1.56e-01 0.165 0.115 0.685 PB L2
ENSG00000228495 LINC01013 825852 sc-eQTL 7.60e-01 -0.0234 0.0764 0.685 PB L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 9.09e-01 0.011 0.0966 0.678 Pro_T L2
ENSG00000079950 STX7 444542 sc-eQTL 5.31e-01 0.0541 0.0862 0.678 Pro_T L2
ENSG00000112303 VNN2 194281 sc-eQTL 7.19e-01 0.0333 0.0925 0.678 Pro_T L2
ENSG00000112306 RPS12 143171 sc-eQTL 2.83e-01 0.0376 0.0349 0.678 Pro_T L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 1.50e-02 0.219 0.0893 0.678 Pro_T L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 9.94e-01 -0.000736 0.0999 0.675 Treg L2
ENSG00000079950 STX7 444542 sc-eQTL 7.84e-01 -0.0259 0.0942 0.675 Treg L2
ENSG00000112303 VNN2 194281 sc-eQTL 9.25e-01 -0.00751 0.0793 0.675 Treg L2
ENSG00000112306 RPS12 143171 sc-eQTL 1.52e-01 0.0501 0.0349 0.675 Treg L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 1.55e-01 0.141 0.0986 0.675 Treg L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 6.51e-01 -0.0473 0.105 0.673 cDC L2
ENSG00000079950 STX7 444542 sc-eQTL 3.69e-01 0.0739 0.082 0.673 cDC L2
ENSG00000093134 VNN3 222975 sc-eQTL 5.76e-01 -0.0456 0.0815 0.673 cDC L2
ENSG00000112299 VNN1 243685 sc-eQTL 6.95e-01 -0.0377 0.0959 0.673 cDC L2
ENSG00000112303 VNN2 194281 sc-eQTL 5.56e-01 0.055 0.0933 0.673 cDC L2
ENSG00000112306 RPS12 143171 sc-eQTL 2.60e-01 0.0519 0.046 0.673 cDC L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 9.03e-01 -0.0112 0.0914 0.673 cDC L2
ENSG00000286438 AL591115.1 -145388 sc-eQTL 6.65e-01 -0.0317 0.073 0.673 cDC L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 7.80e-01 0.0231 0.0824 0.675 cMono_IL1B L2
ENSG00000079950 STX7 444542 sc-eQTL 8.35e-02 0.108 0.0621 0.675 cMono_IL1B L2
ENSG00000093134 VNN3 222975 sc-eQTL 4.38e-01 -0.0686 0.0882 0.675 cMono_IL1B L2
ENSG00000112299 VNN1 243685 sc-eQTL 2.11e-01 0.111 0.0888 0.675 cMono_IL1B L2
ENSG00000112303 VNN2 194281 sc-eQTL 9.74e-01 0.00233 0.0713 0.675 cMono_IL1B L2
ENSG00000112306 RPS12 143171 sc-eQTL 7.96e-01 -0.0103 0.0396 0.675 cMono_IL1B L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 6.74e-01 -0.0322 0.0763 0.675 cMono_IL1B L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 3.78e-01 0.0825 0.0934 0.675 cMono_S100A L2
ENSG00000079950 STX7 444542 sc-eQTL 2.32e-01 0.0806 0.0673 0.675 cMono_S100A L2
ENSG00000093134 VNN3 222975 sc-eQTL 7.72e-01 0.0245 0.0844 0.675 cMono_S100A L2
ENSG00000112299 VNN1 243685 sc-eQTL 1.35e-01 0.137 0.0911 0.675 cMono_S100A L2
ENSG00000112303 VNN2 194281 sc-eQTL 2.96e-01 0.0626 0.0598 0.675 cMono_S100A L2
ENSG00000112306 RPS12 143171 sc-eQTL 6.37e-01 0.0204 0.0432 0.675 cMono_S100A L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 2.44e-01 0.0931 0.0797 0.675 cMono_S100A L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 2.58e-01 -0.14 0.124 0.685 gdT L2
ENSG00000079950 STX7 444542 sc-eQTL 6.64e-01 -0.0466 0.107 0.685 gdT L2
ENSG00000112303 VNN2 194281 sc-eQTL 1.91e-01 0.155 0.118 0.685 gdT L2
ENSG00000112306 RPS12 143171 sc-eQTL 4.97e-01 0.0306 0.045 0.685 gdT L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 1.64e-01 0.162 0.116 0.685 gdT L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 9.81e-01 0.00225 0.0942 0.676 intMono L2
ENSG00000079950 STX7 444542 sc-eQTL 8.14e-01 0.0212 0.0899 0.676 intMono L2
ENSG00000093134 VNN3 222975 sc-eQTL 4.15e-02 0.184 0.0899 0.676 intMono L2
ENSG00000112299 VNN1 243685 sc-eQTL 9.28e-03 0.232 0.0883 0.676 intMono L2
ENSG00000112303 VNN2 194281 sc-eQTL 4.90e-01 0.063 0.0911 0.676 intMono L2
ENSG00000112306 RPS12 143171 sc-eQTL 4.36e-01 -0.031 0.0396 0.676 intMono L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 6.95e-01 -0.0379 0.0966 0.676 intMono L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 1.09e-01 0.158 0.0982 0.67 ncMono L2
ENSG00000079950 STX7 444542 sc-eQTL 4.87e-01 -0.0464 0.0668 0.67 ncMono L2
ENSG00000093134 VNN3 222975 sc-eQTL 6.09e-01 -0.0483 0.0943 0.67 ncMono L2
ENSG00000112299 VNN1 243685 sc-eQTL 4.73e-02 0.185 0.0927 0.67 ncMono L2
ENSG00000112303 VNN2 194281 sc-eQTL 2.94e-01 0.0945 0.0898 0.67 ncMono L2
ENSG00000112306 RPS12 143171 sc-eQTL 5.54e-01 -0.0268 0.0451 0.67 ncMono L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 7.36e-01 -0.0269 0.0798 0.67 ncMono L2
ENSG00000028839 TBPL1 -994430 sc-eQTL 8.35e-01 -0.0239 0.115 0.675 pDC L2
ENSG00000079950 STX7 444542 sc-eQTL 1.16e-01 0.12 0.0756 0.675 pDC L2
ENSG00000093134 VNN3 222975 sc-eQTL 7.71e-01 -0.0224 0.0767 0.675 pDC L2
ENSG00000112299 VNN1 243685 sc-eQTL 8.79e-01 -0.0119 0.0781 0.675 pDC L2
ENSG00000112303 VNN2 194281 sc-eQTL 8.78e-01 0.0143 0.093 0.675 pDC L2
ENSG00000112306 RPS12 143171 sc-eQTL 9.33e-01 0.00541 0.064 0.675 pDC L2
ENSG00000146409 SLC18B1 144401 sc-eQTL 3.73e-01 0.0845 0.0946 0.675 pDC L2
ENSG00000286438 AL591115.1 -145388 sc-eQTL 8.43e-01 -0.018 0.0907 0.675 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028839 TBPL1 -994430 sc-eQTL 3.19e-01 0.0976 0.0978 0.675 B_Memory LOneK1K
ENSG00000079931 MOXD1 556265 sc-eQTL 1.90e-01 0.125 0.0948 0.675 B_Memory LOneK1K
ENSG00000079950 STX7 444542 sc-eQTL 7.75e-01 -0.0154 0.0539 0.675 B_Memory LOneK1K
ENSG00000112303 VNN2 194281 sc-eQTL 3.29e-01 0.0834 0.0851 0.675 B_Memory LOneK1K
ENSG00000112306 RPS12 143171 sc-eQTL 7.22e-01 0.0173 0.0486 0.675 B_Memory LOneK1K
ENSG00000146409 SLC18B1 144401 sc-eQTL 9.05e-01 0.0107 0.0892 0.675 B_Memory LOneK1K
ENSG00000228495 LINC01013 825852 sc-eQTL 7.99e-01 -0.022 0.0861 0.675 B_Memory LOneK1K
ENSG00000028839 TBPL1 -994430 sc-eQTL 6.94e-01 -0.0374 0.0948 0.675 B_Naive LOneK1K
ENSG00000079931 MOXD1 556265 sc-eQTL 3.28e-01 -0.102 0.104 0.675 B_Naive LOneK1K
ENSG00000079950 STX7 444542 sc-eQTL 7.72e-01 -0.0124 0.0427 0.675 B_Naive LOneK1K
ENSG00000112303 VNN2 194281 sc-eQTL 2.49e-01 -0.0956 0.0827 0.675 B_Naive LOneK1K
ENSG00000112306 RPS12 143171 sc-eQTL 5.22e-01 0.0322 0.0502 0.675 B_Naive LOneK1K
ENSG00000146409 SLC18B1 144401 sc-eQTL 1.37e-01 0.141 0.0942 0.675 B_Naive LOneK1K
ENSG00000228495 LINC01013 825852 sc-eQTL 5.41e-01 -0.0368 0.0601 0.675 B_Naive LOneK1K
ENSG00000028839 TBPL1 -994430 sc-eQTL 4.92e-01 0.0519 0.0754 0.675 CD14_Mono LOneK1K
ENSG00000079950 STX7 444542 sc-eQTL 3.36e-02 0.111 0.052 0.675 CD14_Mono LOneK1K
ENSG00000093134 VNN3 222975 sc-eQTL 7.63e-01 -0.0258 0.0856 0.675 CD14_Mono LOneK1K
ENSG00000112299 VNN1 243685 sc-eQTL 1.26e-01 0.136 0.0888 0.675 CD14_Mono LOneK1K
ENSG00000112303 VNN2 194281 sc-eQTL 4.67e-01 0.0429 0.0589 0.675 CD14_Mono LOneK1K
ENSG00000112306 RPS12 143171 sc-eQTL 7.56e-01 0.0126 0.0405 0.675 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 144401 sc-eQTL 9.61e-01 0.00356 0.072 0.675 CD14_Mono LOneK1K
ENSG00000028839 TBPL1 -994430 sc-eQTL 4.79e-01 0.0673 0.0949 0.672 CD16_Mono LOneK1K
ENSG00000079950 STX7 444542 sc-eQTL 7.44e-01 0.0205 0.0627 0.672 CD16_Mono LOneK1K
ENSG00000093134 VNN3 222975 sc-eQTL 4.28e-01 0.0732 0.0921 0.672 CD16_Mono LOneK1K
ENSG00000112299 VNN1 243685 sc-eQTL 8.06e-02 0.159 0.0907 0.672 CD16_Mono LOneK1K
ENSG00000112303 VNN2 194281 sc-eQTL 2.47e-01 0.0998 0.0859 0.672 CD16_Mono LOneK1K
ENSG00000112306 RPS12 143171 sc-eQTL 4.73e-01 -0.0262 0.0365 0.672 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 144401 sc-eQTL 8.65e-01 -0.0151 0.0888 0.672 CD16_Mono LOneK1K
ENSG00000028839 TBPL1 -994430 sc-eQTL 8.48e-02 -0.135 0.0777 0.675 NK_CD56dim LOneK1K
ENSG00000079950 STX7 444542 sc-eQTL 1.10e-01 0.117 0.0731 0.675 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 194281 sc-eQTL 3.37e-01 0.0894 0.0929 0.675 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 143171 sc-eQTL 9.83e-01 0.000803 0.038 0.675 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000093134 VNN3 222975 eQTL 0.00577 0.042 0.0152 0.0 0.0 0.315
ENSG00000112303 VNN2 194281 eQTL 0.0206 0.0313 0.0135 0.0 0.0 0.315
ENSG00000146409 SLC18B1 144401 eQTL 4.65e-15 0.18 0.0226 0.0 0.0 0.315
ENSG00000234484 AL032821.1 205065 eQTL 5.73e-06 -0.147 0.0321 0.00151 0.0 0.315

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000093134 VNN3 222975 1.29e-06 1.03e-06 2.79e-07 1.16e-06 2.31e-07 6.01e-07 1.55e-06 3.31e-07 1.28e-06 3.82e-07 1.84e-06 5.64e-07 2.45e-06 2.87e-07 4.91e-07 6.89e-07 8.3e-07 5.76e-07 7.4e-07 6.87e-07 3.07e-07 1.35e-06 8.91e-07 5.91e-07 2.23e-06 3.47e-07 7.55e-07 6.83e-07 1.31e-06 1.23e-06 6.68e-07 5.3e-08 1.95e-07 6.83e-07 5.46e-07 3.38e-07 5.32e-07 1.53e-07 2.32e-07 9.67e-09 1.22e-07 1.6e-06 5.53e-08 6.53e-08 1.91e-07 7.64e-08 1.46e-07 2.41e-08 5.93e-08
ENSG00000146409 SLC18B1 144401 2.82e-06 2.53e-06 2.86e-07 1.68e-06 4.75e-07 8.16e-07 2.07e-06 4.27e-07 1.65e-06 7.65e-07 2.49e-06 1.45e-06 3.83e-06 1.35e-06 5.03e-07 1.07e-06 1.12e-06 1.55e-06 7.31e-07 8.21e-07 6.34e-07 2.51e-06 2.02e-06 8.48e-07 3.89e-06 1.07e-06 1.15e-06 1.05e-06 1.95e-06 2.65e-06 1.64e-06 2.1e-07 3.85e-07 1.08e-06 9.16e-07 6.22e-07 7.71e-07 3.46e-07 6.91e-07 2.31e-07 2.79e-07 3.49e-06 4.1e-07 1.74e-07 2.84e-07 3.02e-07 2.45e-07 2.77e-08 1.23e-07
ENSG00000234484 AL032821.1 205065 1.4e-06 1.36e-06 3.58e-07 1.29e-06 2.93e-07 6.25e-07 1.52e-06 3.31e-07 1.49e-06 4.31e-07 2.06e-06 6.43e-07 2.7e-06 3.07e-07 5.22e-07 8.25e-07 9e-07 6.94e-07 8.67e-07 6.34e-07 4.19e-07 1.72e-06 9.11e-07 6.42e-07 2.46e-06 4.36e-07 8.99e-07 7.01e-07 1.48e-06 1.38e-06 8e-07 4.28e-08 2.19e-07 6.93e-07 5.21e-07 4.34e-07 6.17e-07 1.36e-07 3.73e-07 7.66e-08 2.11e-07 1.86e-06 8.26e-08 9.69e-08 1.73e-07 1.11e-07 1.97e-07 4.47e-08 5.86e-08