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Genes within 1Mb (chr6:132746545:C:CT):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 345070 sc-eQTL 9.51e-02 0.156 0.0927 0.308 B L1
ENSG00000079950 STX7 233347 sc-eQTL 3.95e-02 0.0722 0.0349 0.308 B L1
ENSG00000112303 VNN2 -16914 sc-eQTL 7.71e-02 -0.117 0.0657 0.308 B L1
ENSG00000112306 RPS12 -68024 sc-eQTL 6.06e-04 0.136 0.0389 0.308 B L1
ENSG00000146409 SLC18B1 -66794 sc-eQTL 3.51e-01 -0.0785 0.0841 0.308 B L1
ENSG00000228495 LINC01013 614657 sc-eQTL 7.68e-01 -0.0163 0.0553 0.308 B L1
ENSG00000079950 STX7 233347 sc-eQTL 8.59e-01 -0.0121 0.0682 0.308 CD4T L1
ENSG00000112303 VNN2 -16914 sc-eQTL 1.72e-01 -0.0806 0.0588 0.308 CD4T L1
ENSG00000112306 RPS12 -68024 sc-eQTL 4.41e-01 0.031 0.0401 0.308 CD4T L1
ENSG00000146409 SLC18B1 -66794 sc-eQTL 3.27e-01 -0.0796 0.081 0.308 CD4T L1
ENSG00000079950 STX7 233347 sc-eQTL 6.11e-01 -0.0345 0.0676 0.308 CD8T L1
ENSG00000112303 VNN2 -16914 sc-eQTL 9.65e-08 -0.408 0.0738 0.308 CD8T L1
ENSG00000112306 RPS12 -68024 sc-eQTL 9.31e-01 0.00234 0.027 0.308 CD8T L1
ENSG00000146409 SLC18B1 -66794 sc-eQTL 2.31e-02 -0.185 0.0806 0.308 CD8T L1
ENSG00000079950 STX7 233347 sc-eQTL 1.39e-01 -0.09 0.0606 0.315 DC L1
ENSG00000093134 VNN3 11780 sc-eQTL 9.13e-01 0.00825 0.0756 0.315 DC L1
ENSG00000112299 VNN1 32490 sc-eQTL 1.82e-01 -0.109 0.0812 0.315 DC L1
ENSG00000112303 VNN2 -16914 sc-eQTL 1.98e-03 -0.267 0.0852 0.315 DC L1
ENSG00000112306 RPS12 -68024 sc-eQTL 5.48e-01 0.0295 0.0489 0.315 DC L1
ENSG00000146409 SLC18B1 -66794 sc-eQTL 1.24e-02 -0.192 0.0763 0.315 DC L1
ENSG00000286438 AL591115.1 -356583 sc-eQTL 1.26e-01 0.108 0.0701 0.315 DC L1
ENSG00000079950 STX7 233347 sc-eQTL 4.47e-01 0.0352 0.0462 0.308 Mono L1
ENSG00000093134 VNN3 11780 sc-eQTL 1.50e-02 -0.192 0.0783 0.308 Mono L1
ENSG00000112299 VNN1 32490 sc-eQTL 7.99e-01 0.0218 0.0855 0.308 Mono L1
ENSG00000112303 VNN2 -16914 sc-eQTL 2.04e-13 -0.417 0.0531 0.308 Mono L1
ENSG00000112306 RPS12 -68024 sc-eQTL 8.69e-01 0.00595 0.0361 0.308 Mono L1
ENSG00000146409 SLC18B1 -66794 sc-eQTL 6.07e-02 -0.134 0.0709 0.308 Mono L1
ENSG00000079950 STX7 233347 sc-eQTL 4.18e-01 -0.0567 0.07 0.309 NK L1
ENSG00000112303 VNN2 -16914 sc-eQTL 1.03e-01 -0.142 0.0867 0.309 NK L1
ENSG00000112306 RPS12 -68024 sc-eQTL 4.00e-01 0.0304 0.036 0.309 NK L1
ENSG00000079950 STX7 233347 sc-eQTL 4.09e-01 -0.058 0.0702 0.308 Other_T L1
ENSG00000112303 VNN2 -16914 sc-eQTL 1.58e-02 -0.204 0.0839 0.308 Other_T L1
ENSG00000112306 RPS12 -68024 sc-eQTL 6.08e-01 0.0173 0.0337 0.308 Other_T L1
ENSG00000146409 SLC18B1 -66794 sc-eQTL 1.47e-01 -0.134 0.0919 0.308 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 345070 sc-eQTL 9.80e-01 -0.0024 0.0935 0.296 B_Activated L2
ENSG00000079950 STX7 233347 sc-eQTL 2.62e-02 0.194 0.0864 0.296 B_Activated L2
ENSG00000112303 VNN2 -16914 sc-eQTL 1.16e-02 -0.234 0.0916 0.296 B_Activated L2
ENSG00000112306 RPS12 -68024 sc-eQTL 3.39e-01 0.0478 0.0498 0.296 B_Activated L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 2.31e-01 -0.105 0.0872 0.296 B_Activated L2
ENSG00000228495 LINC01013 614657 sc-eQTL 4.33e-01 -0.0655 0.0833 0.296 B_Activated L2
ENSG00000079931 MOXD1 345070 sc-eQTL 4.24e-01 0.0692 0.0863 0.307 B_Intermediate L2
ENSG00000079950 STX7 233347 sc-eQTL 1.64e-01 0.0786 0.0563 0.307 B_Intermediate L2
ENSG00000112303 VNN2 -16914 sc-eQTL 8.07e-01 -0.0209 0.0852 0.307 B_Intermediate L2
ENSG00000112306 RPS12 -68024 sc-eQTL 4.46e-05 0.209 0.0502 0.307 B_Intermediate L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 3.62e-01 -0.0857 0.0938 0.307 B_Intermediate L2
ENSG00000228495 LINC01013 614657 sc-eQTL 2.29e-01 -0.096 0.0796 0.307 B_Intermediate L2
ENSG00000079931 MOXD1 345070 sc-eQTL 3.32e-02 0.185 0.0861 0.304 B_Memory L2
ENSG00000079950 STX7 233347 sc-eQTL 4.95e-02 0.134 0.0677 0.304 B_Memory L2
ENSG00000112303 VNN2 -16914 sc-eQTL 5.84e-01 -0.0489 0.0893 0.304 B_Memory L2
ENSG00000112306 RPS12 -68024 sc-eQTL 3.04e-02 0.0928 0.0426 0.304 B_Memory L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 8.47e-01 0.0174 0.0898 0.304 B_Memory L2
ENSG00000228495 LINC01013 614657 sc-eQTL 3.91e-02 -0.172 0.0829 0.304 B_Memory L2
ENSG00000079931 MOXD1 345070 sc-eQTL 3.92e-01 -0.0844 0.0984 0.308 B_Naive1 L2
ENSG00000079950 STX7 233347 sc-eQTL 4.03e-01 0.036 0.043 0.308 B_Naive1 L2
ENSG00000112303 VNN2 -16914 sc-eQTL 4.35e-01 -0.0654 0.0835 0.308 B_Naive1 L2
ENSG00000112306 RPS12 -68024 sc-eQTL 1.47e-02 0.116 0.047 0.308 B_Naive1 L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 4.23e-01 -0.0737 0.0918 0.308 B_Naive1 L2
ENSG00000228495 LINC01013 614657 sc-eQTL 8.73e-01 -0.00978 0.0609 0.308 B_Naive1 L2
ENSG00000079931 MOXD1 345070 sc-eQTL 3.50e-01 0.0863 0.0922 0.305 B_Naive2 L2
ENSG00000079950 STX7 233347 sc-eQTL 8.60e-02 0.0862 0.05 0.305 B_Naive2 L2
ENSG00000112303 VNN2 -16914 sc-eQTL 7.21e-01 -0.033 0.0923 0.305 B_Naive2 L2
ENSG00000112306 RPS12 -68024 sc-eQTL 2.24e-02 0.111 0.0483 0.305 B_Naive2 L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 1.37e-01 -0.138 0.0928 0.305 B_Naive2 L2
ENSG00000228495 LINC01013 614657 sc-eQTL 5.14e-01 0.0422 0.0646 0.305 B_Naive2 L2
ENSG00000079950 STX7 233347 sc-eQTL 3.07e-01 0.0961 0.0938 0.309 CD4_CTL L2
ENSG00000112303 VNN2 -16914 sc-eQTL 2.98e-01 -0.0988 0.0946 0.309 CD4_CTL L2
ENSG00000112306 RPS12 -68024 sc-eQTL 3.58e-01 -0.0403 0.0437 0.309 CD4_CTL L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 3.81e-01 -0.0775 0.0882 0.309 CD4_CTL L2
ENSG00000079950 STX7 233347 sc-eQTL 9.21e-01 -0.00732 0.0737 0.308 CD4_Naive L2
ENSG00000112303 VNN2 -16914 sc-eQTL 4.54e-01 -0.0512 0.0682 0.308 CD4_Naive L2
ENSG00000112306 RPS12 -68024 sc-eQTL 7.89e-02 0.0776 0.0439 0.308 CD4_Naive L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 8.28e-01 0.0186 0.0852 0.308 CD4_Naive L2
ENSG00000079950 STX7 233347 sc-eQTL 5.33e-01 -0.0505 0.0809 0.308 CD4_TCM L2
ENSG00000112303 VNN2 -16914 sc-eQTL 1.91e-02 -0.186 0.0787 0.308 CD4_TCM L2
ENSG00000112306 RPS12 -68024 sc-eQTL 4.62e-01 0.0304 0.0413 0.308 CD4_TCM L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 4.06e-02 -0.195 0.0948 0.308 CD4_TCM L2
ENSG00000079950 STX7 233347 sc-eQTL 9.06e-01 0.0112 0.0943 0.308 CD4_TEM L2
ENSG00000112303 VNN2 -16914 sc-eQTL 7.90e-01 0.0241 0.0905 0.308 CD4_TEM L2
ENSG00000112306 RPS12 -68024 sc-eQTL 2.68e-01 0.0411 0.037 0.308 CD4_TEM L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 1.18e-02 -0.231 0.0908 0.308 CD4_TEM L2
ENSG00000079950 STX7 233347 sc-eQTL 8.39e-01 -0.016 0.0783 0.308 CD8_CTL L2
ENSG00000112303 VNN2 -16914 sc-eQTL 4.73e-06 -0.398 0.0846 0.308 CD8_CTL L2
ENSG00000112306 RPS12 -68024 sc-eQTL 6.18e-03 -0.129 0.0468 0.308 CD8_CTL L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 2.26e-01 -0.112 0.0919 0.308 CD8_CTL L2
ENSG00000079950 STX7 233347 sc-eQTL 7.71e-01 0.028 0.0962 0.308 CD8_Naive L2
ENSG00000112303 VNN2 -16914 sc-eQTL 1.99e-01 -0.106 0.0827 0.308 CD8_Naive L2
ENSG00000112306 RPS12 -68024 sc-eQTL 3.84e-02 0.098 0.047 0.308 CD8_Naive L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 6.34e-02 -0.176 0.0945 0.308 CD8_Naive L2
ENSG00000079950 STX7 233347 sc-eQTL 3.79e-01 -0.0824 0.0934 0.308 CD8_TCM L2
ENSG00000112303 VNN2 -16914 sc-eQTL 3.58e-01 -0.0854 0.0927 0.308 CD8_TCM L2
ENSG00000112306 RPS12 -68024 sc-eQTL 3.70e-01 0.0406 0.0452 0.308 CD8_TCM L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 1.39e-02 -0.242 0.0977 0.308 CD8_TCM L2
ENSG00000079950 STX7 233347 sc-eQTL 9.54e-01 -0.00584 0.102 0.315 CD8_TEM L2
ENSG00000112303 VNN2 -16914 sc-eQTL 3.11e-02 -0.217 0.0999 0.315 CD8_TEM L2
ENSG00000112306 RPS12 -68024 sc-eQTL 6.95e-02 -0.0984 0.0539 0.315 CD8_TEM L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 9.22e-01 -0.0101 0.103 0.315 CD8_TEM L2
ENSG00000079950 STX7 233347 sc-eQTL 8.78e-01 -0.0138 0.0898 0.312 MAIT L2
ENSG00000112303 VNN2 -16914 sc-eQTL 1.68e-01 -0.126 0.0909 0.312 MAIT L2
ENSG00000112306 RPS12 -68024 sc-eQTL 8.39e-01 -0.00915 0.0449 0.312 MAIT L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 1.36e-01 -0.14 0.0937 0.312 MAIT L2
ENSG00000079950 STX7 233347 sc-eQTL 2.17e-01 -0.115 0.0927 0.309 NK_CD56bright L2
ENSG00000112303 VNN2 -16914 sc-eQTL 5.97e-01 0.05 0.0944 0.309 NK_CD56bright L2
ENSG00000112306 RPS12 -68024 sc-eQTL 6.34e-01 -0.0251 0.0526 0.309 NK_CD56bright L2
ENSG00000079950 STX7 233347 sc-eQTL 8.10e-01 0.0181 0.075 0.308 NK_CD56dim L2
ENSG00000112303 VNN2 -16914 sc-eQTL 8.78e-01 -0.0144 0.0939 0.308 NK_CD56dim L2
ENSG00000112306 RPS12 -68024 sc-eQTL 7.34e-01 0.0127 0.0372 0.308 NK_CD56dim L2
ENSG00000079950 STX7 233347 sc-eQTL 5.97e-01 0.0487 0.0921 0.306 NK_HLA L2
ENSG00000112303 VNN2 -16914 sc-eQTL 1.39e-01 -0.138 0.0927 0.306 NK_HLA L2
ENSG00000112306 RPS12 -68024 sc-eQTL 3.50e-01 -0.0406 0.0433 0.306 NK_HLA L2
ENSG00000079950 STX7 233347 sc-eQTL 6.47e-01 -0.037 0.0808 0.308 NK_cytokine L2
ENSG00000112303 VNN2 -16914 sc-eQTL 7.30e-02 -0.163 0.0902 0.308 NK_cytokine L2
ENSG00000112306 RPS12 -68024 sc-eQTL 3.21e-01 0.0489 0.0492 0.308 NK_cytokine L2
ENSG00000079931 MOXD1 345070 sc-eQTL 8.98e-01 0.013 0.101 0.304 PB L2
ENSG00000079950 STX7 233347 sc-eQTL 9.10e-02 0.143 0.0836 0.304 PB L2
ENSG00000112303 VNN2 -16914 sc-eQTL 7.97e-01 -0.0267 0.103 0.304 PB L2
ENSG00000112306 RPS12 -68024 sc-eQTL 1.96e-01 0.0759 0.0583 0.304 PB L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 5.49e-01 0.0661 0.11 0.304 PB L2
ENSG00000228495 LINC01013 614657 sc-eQTL 5.68e-01 0.0413 0.0723 0.304 PB L2
ENSG00000079950 STX7 233347 sc-eQTL 4.35e-01 -0.0672 0.086 0.3 Pro_T L2
ENSG00000112303 VNN2 -16914 sc-eQTL 3.64e-01 -0.0838 0.0922 0.3 Pro_T L2
ENSG00000112306 RPS12 -68024 sc-eQTL 2.86e-01 0.0372 0.0348 0.3 Pro_T L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 9.69e-01 0.00351 0.0904 0.3 Pro_T L2
ENSG00000079950 STX7 233347 sc-eQTL 5.40e-01 -0.0558 0.091 0.308 Treg L2
ENSG00000112303 VNN2 -16914 sc-eQTL 1.14e-01 -0.121 0.0762 0.308 Treg L2
ENSG00000112306 RPS12 -68024 sc-eQTL 7.89e-01 0.00908 0.0339 0.308 Treg L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 3.30e-01 -0.0934 0.0956 0.308 Treg L2
ENSG00000079950 STX7 233347 sc-eQTL 8.93e-01 0.0105 0.0781 0.322 cDC L2
ENSG00000093134 VNN3 11780 sc-eQTL 8.87e-01 0.011 0.0776 0.322 cDC L2
ENSG00000112299 VNN1 32490 sc-eQTL 2.48e-01 -0.105 0.0909 0.322 cDC L2
ENSG00000112303 VNN2 -16914 sc-eQTL 1.42e-02 -0.216 0.0874 0.322 cDC L2
ENSG00000112306 RPS12 -68024 sc-eQTL 9.18e-01 0.00451 0.0439 0.322 cDC L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 3.55e-02 -0.182 0.0859 0.322 cDC L2
ENSG00000286438 AL591115.1 -356583 sc-eQTL 1.79e-01 0.0932 0.0691 0.322 cDC L2
ENSG00000079950 STX7 233347 sc-eQTL 2.65e-01 0.0661 0.0591 0.308 cMono_IL1B L2
ENSG00000093134 VNN3 11780 sc-eQTL 1.16e-02 -0.21 0.0826 0.308 cMono_IL1B L2
ENSG00000112299 VNN1 32490 sc-eQTL 9.81e-01 0.002 0.0846 0.308 cMono_IL1B L2
ENSG00000112303 VNN2 -16914 sc-eQTL 8.53e-12 -0.438 0.0605 0.308 cMono_IL1B L2
ENSG00000112306 RPS12 -68024 sc-eQTL 4.21e-01 -0.0302 0.0375 0.308 cMono_IL1B L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 4.45e-01 -0.0554 0.0723 0.308 cMono_IL1B L2
ENSG00000079950 STX7 233347 sc-eQTL 2.35e-01 0.0765 0.0643 0.308 cMono_S100A L2
ENSG00000093134 VNN3 11780 sc-eQTL 1.41e-03 -0.254 0.0786 0.308 cMono_S100A L2
ENSG00000112299 VNN1 32490 sc-eQTL 7.19e-01 0.0315 0.0874 0.308 cMono_S100A L2
ENSG00000112303 VNN2 -16914 sc-eQTL 2.33e-08 -0.309 0.0532 0.308 cMono_S100A L2
ENSG00000112306 RPS12 -68024 sc-eQTL 6.05e-01 0.0213 0.0412 0.308 cMono_S100A L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 6.73e-04 -0.256 0.0743 0.308 cMono_S100A L2
ENSG00000079950 STX7 233347 sc-eQTL 5.99e-01 -0.0547 0.104 0.324 gdT L2
ENSG00000112303 VNN2 -16914 sc-eQTL 5.56e-01 -0.0676 0.115 0.324 gdT L2
ENSG00000112306 RPS12 -68024 sc-eQTL 7.86e-01 0.0119 0.0437 0.324 gdT L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 3.64e-01 0.103 0.113 0.324 gdT L2
ENSG00000079950 STX7 233347 sc-eQTL 8.70e-01 0.0142 0.0868 0.307 intMono L2
ENSG00000093134 VNN3 11780 sc-eQTL 9.56e-01 0.00479 0.0877 0.307 intMono L2
ENSG00000112299 VNN1 32490 sc-eQTL 5.49e-01 0.052 0.0866 0.307 intMono L2
ENSG00000112303 VNN2 -16914 sc-eQTL 4.80e-04 -0.303 0.0855 0.307 intMono L2
ENSG00000112306 RPS12 -68024 sc-eQTL 7.20e-01 0.0138 0.0383 0.307 intMono L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 2.58e-02 -0.207 0.0922 0.307 intMono L2
ENSG00000079950 STX7 233347 sc-eQTL 8.41e-01 -0.0132 0.0656 0.312 ncMono L2
ENSG00000093134 VNN3 11780 sc-eQTL 4.09e-01 0.0764 0.0925 0.312 ncMono L2
ENSG00000112299 VNN1 32490 sc-eQTL 3.47e-01 -0.0865 0.0918 0.312 ncMono L2
ENSG00000112303 VNN2 -16914 sc-eQTL 4.09e-06 -0.397 0.0838 0.312 ncMono L2
ENSG00000112306 RPS12 -68024 sc-eQTL 2.63e-02 0.0981 0.0438 0.312 ncMono L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 7.83e-01 0.0216 0.0783 0.312 ncMono L2
ENSG00000079950 STX7 233347 sc-eQTL 9.62e-01 -0.00347 0.0734 0.331 pDC L2
ENSG00000093134 VNN3 11780 sc-eQTL 3.08e-01 -0.0753 0.0736 0.331 pDC L2
ENSG00000112299 VNN1 32490 sc-eQTL 3.29e-02 -0.159 0.0741 0.331 pDC L2
ENSG00000112303 VNN2 -16914 sc-eQTL 7.77e-05 -0.345 0.085 0.331 pDC L2
ENSG00000112306 RPS12 -68024 sc-eQTL 2.88e-02 0.134 0.0607 0.331 pDC L2
ENSG00000146409 SLC18B1 -66794 sc-eQTL 1.52e-01 -0.13 0.0906 0.331 pDC L2
ENSG00000286438 AL591115.1 -356583 sc-eQTL 9.66e-01 0.00377 0.0873 0.331 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 345070 sc-eQTL 8.75e-02 0.156 0.0907 0.308 B_Memory LOneK1K
ENSG00000079950 STX7 233347 sc-eQTL 2.33e-02 0.117 0.0511 0.308 B_Memory LOneK1K
ENSG00000112303 VNN2 -16914 sc-eQTL 5.77e-01 -0.0458 0.0818 0.308 B_Memory LOneK1K
ENSG00000112306 RPS12 -68024 sc-eQTL 1.51e-04 0.174 0.0451 0.308 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -66794 sc-eQTL 4.07e-01 -0.071 0.0855 0.308 B_Memory LOneK1K
ENSG00000228495 LINC01013 614657 sc-eQTL 3.85e-02 -0.17 0.0818 0.308 B_Memory LOneK1K
ENSG00000079931 MOXD1 345070 sc-eQTL 9.53e-01 0.0058 0.0984 0.308 B_Naive LOneK1K
ENSG00000079950 STX7 233347 sc-eQTL 1.50e-01 0.0581 0.0402 0.308 B_Naive LOneK1K
ENSG00000112303 VNN2 -16914 sc-eQTL 2.45e-01 -0.091 0.0782 0.308 B_Naive LOneK1K
ENSG00000112306 RPS12 -68024 sc-eQTL 1.61e-02 0.114 0.0468 0.308 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -66794 sc-eQTL 2.63e-01 -0.1 0.0892 0.308 B_Naive LOneK1K
ENSG00000228495 LINC01013 614657 sc-eQTL 6.65e-01 0.0246 0.0568 0.308 B_Naive LOneK1K
ENSG00000079950 STX7 233347 sc-eQTL 2.27e-01 0.06 0.0495 0.308 CD14_Mono LOneK1K
ENSG00000093134 VNN3 11780 sc-eQTL 2.75e-03 -0.24 0.0793 0.308 CD14_Mono LOneK1K
ENSG00000112299 VNN1 32490 sc-eQTL 6.96e-01 0.033 0.0845 0.308 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -16914 sc-eQTL 1.98e-12 -0.371 0.0497 0.308 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -68024 sc-eQTL 7.75e-01 -0.011 0.0383 0.308 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -66794 sc-eQTL 6.33e-02 -0.126 0.0676 0.308 CD14_Mono LOneK1K
ENSG00000079950 STX7 233347 sc-eQTL 3.56e-01 -0.0566 0.0612 0.308 CD16_Mono LOneK1K
ENSG00000093134 VNN3 11780 sc-eQTL 3.25e-01 0.0888 0.09 0.308 CD16_Mono LOneK1K
ENSG00000112299 VNN1 32490 sc-eQTL 5.54e-01 -0.0529 0.0893 0.308 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -16914 sc-eQTL 1.62e-07 -0.428 0.0789 0.308 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -68024 sc-eQTL 1.76e-01 0.0483 0.0356 0.308 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -66794 sc-eQTL 3.77e-02 -0.18 0.0859 0.308 CD16_Mono LOneK1K
ENSG00000079950 STX7 233347 sc-eQTL 5.78e-01 -0.039 0.0702 0.308 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -16914 sc-eQTL 4.09e-02 -0.181 0.088 0.308 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -68024 sc-eQTL 4.53e-01 0.0273 0.0362 0.308 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000093134 VNN3 11780 eQTL 2.98e-97 -0.301 0.0128 0.227 0.16 0.321
ENSG00000112299 VNN1 32490 pQTL 1.47e-06 0.186 0.0385 0.00187 0.00302 0.313
ENSG00000112299 VNN1 32490 eQTL 7.88e-54 0.348 0.0211 0.0 0.0343 0.321
ENSG00000112303 VNN2 -16914 pQTL 1.21e-130 -0.61 0.0223 0.137 0.128 0.313
ENSG00000112303 VNN2 -16914 eQTL 3.7199999999999998e-81 -0.248 0.0118 0.0 0.0475 0.321
ENSG00000146409 SLC18B1 -66794 eQTL 1.17e-12 -0.172 0.0239 0.0 0.0 0.321
ENSG00000234484 AL032821.1 -6130 eQTL 4.12e-162 0.776 0.0233 0.00428 0.187 0.321

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000093134 VNN3 11780 0.000227 0.000134 1.4e-05 2.29e-05 7.14e-06 3.76e-05 0.000121 5.47e-06 7.87e-05 2.98e-05 0.000119 3.02e-05 0.000155 3.82e-05 1.26e-05 6.77e-05 5.32e-05 7.18e-05 1.35e-05 8.59e-06 3.11e-05 0.000117 0.00014 1.36e-05 8.07e-05 2.26e-05 3.37e-05 2.04e-05 0.000105 3.83e-05 5.58e-05 1.58e-06 4.67e-06 9.48e-06 1.43e-05 8.12e-06 3.43e-06 3.37e-06 5.92e-06 3.24e-06 1.52e-06 0.000168 1.2e-05 2.01e-07 3.69e-06 6.83e-06 5.53e-06 1.42e-06 1.41e-06
ENSG00000112299 VNN1 32490 0.000171 5.18e-05 7.01e-06 1.41e-05 3.05e-06 1.74e-05 5.68e-05 2.14e-06 3.11e-05 1.03e-05 4.09e-05 9.41e-06 6.83e-05 1.1e-05 5.36e-06 2.02e-05 1.73e-05 3.58e-05 5.56e-06 4.23e-06 1.35e-05 4.41e-05 6.72e-05 4.97e-06 3.25e-05 7.46e-06 1.06e-05 8.88e-06 4.74e-05 1.58e-05 1.68e-05 9.77e-07 1.49e-06 5.15e-06 7.8e-06 4.46e-06 1.76e-06 2.45e-06 2.49e-06 2.33e-06 8.81e-07 7.27e-05 3.87e-06 1.59e-07 1.27e-06 3.36e-06 2.6e-06 7.19e-07 4.52e-07
ENSG00000112303 VNN2 -16914 0.00021 0.000106 9.9e-06 1.87e-05 5.54e-06 2.74e-05 0.0001 3.72e-06 6.1e-05 2.1e-05 8.83e-05 2.12e-05 0.000124 2.56e-05 8.74e-06 4.79e-05 3.78e-05 5.73e-05 9.5e-06 6.89e-06 2.48e-05 9.07e-05 0.000111 1.02e-05 5.79e-05 1.6e-05 2.4e-05 1.55e-05 8.47e-05 2.99e-05 4.03e-05 1.24e-06 3.07e-06 7.93e-06 1.2e-05 6.44e-06 2.62e-06 3.12e-06 4.29e-06 2.92e-06 1.12e-06 0.00013 6.88e-06 1.47e-07 2.67e-06 5.28e-06 4.52e-06 8.83e-07 9.21e-07
ENSG00000146409 SLC18B1 -66794 8.27e-05 1.99e-05 6.41e-06 8.21e-06 2.38e-06 6.12e-06 2.08e-05 1.17e-06 1.17e-05 5.16e-06 1.38e-05 5.25e-06 2.86e-05 3.97e-06 3.15e-06 8.83e-06 8.2e-06 1.7e-05 2.99e-06 2.82e-06 7.26e-06 1.44e-05 2.94e-05 3.03e-06 1.6e-05 4.53e-06 4.67e-06 4.8e-06 1.77e-05 7.8e-06 5.48e-06 4.73e-07 7.36e-07 3.37e-06 4.02e-06 2.81e-06 1.71e-06 1.86e-06 1.34e-06 1.15e-06 2.22e-07 2.75e-05 2.52e-06 1.9e-07 6.94e-07 2.45e-06 9.03e-07 4.11e-07 6.01e-07
ENSG00000234484 AL032821.1 -6130 0.000227 0.000192 2.39e-05 3.66e-05 1.41e-05 5.59e-05 0.000182 1.2e-05 0.000125 4.83e-05 0.000183 6.39e-05 0.000232 6.24e-05 2.45e-05 0.000104 7.46e-05 0.000101 2.75e-05 1.74e-05 5.17e-05 0.000167 0.00018 3.01e-05 0.000148 3.84e-05 6.74e-05 3.92e-05 0.000145 6.75e-05 8.99e-05 3.87e-06 8.48e-06 1.88e-05 2.28e-05 1.36e-05 5.7e-06 6.22e-06 9.77e-06 4.91e-06 1.83e-06 0.000254 2.02e-05 4.29e-07 8.55e-06 1.33e-05 1.18e-05 3.73e-06 3.61e-06