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Genes within 1Mb (chr6:132626253:G:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 224778 sc-eQTL 4.96e-01 -0.0852 0.125 0.872 B L1
ENSG00000079950 STX7 113055 sc-eQTL 1.83e-01 -0.0628 0.047 0.872 B L1
ENSG00000112282 MED23 998011 sc-eQTL 6.44e-01 0.0435 0.0941 0.872 B L1
ENSG00000112303 VNN2 -137206 sc-eQTL 5.05e-03 0.247 0.0871 0.872 B L1
ENSG00000112306 RPS12 -188316 sc-eQTL 4.16e-02 0.109 0.0532 0.872 B L1
ENSG00000146409 SLC18B1 -187086 sc-eQTL 4.44e-01 0.0865 0.113 0.872 B L1
ENSG00000228495 LINC01013 494365 sc-eQTL 5.12e-02 0.144 0.0735 0.872 B L1
ENSG00000079950 STX7 113055 sc-eQTL 6.85e-01 -0.0371 0.0915 0.872 CD4T L1
ENSG00000112282 MED23 998011 sc-eQTL 9.32e-01 0.00625 0.0726 0.872 CD4T L1
ENSG00000112303 VNN2 -137206 sc-eQTL 9.66e-01 0.00335 0.0793 0.872 CD4T L1
ENSG00000112306 RPS12 -188316 sc-eQTL 9.69e-02 0.0893 0.0536 0.872 CD4T L1
ENSG00000146409 SLC18B1 -187086 sc-eQTL 8.49e-01 -0.0207 0.109 0.872 CD4T L1
ENSG00000079950 STX7 113055 sc-eQTL 7.75e-01 0.0259 0.0903 0.872 CD8T L1
ENSG00000112282 MED23 998011 sc-eQTL 1.29e-01 0.135 0.0885 0.872 CD8T L1
ENSG00000112303 VNN2 -137206 sc-eQTL 7.09e-01 0.0394 0.105 0.872 CD8T L1
ENSG00000112306 RPS12 -188316 sc-eQTL 1.42e-02 0.0878 0.0355 0.872 CD8T L1
ENSG00000146409 SLC18B1 -187086 sc-eQTL 6.87e-01 0.0439 0.109 0.872 CD8T L1
ENSG00000079950 STX7 113055 sc-eQTL 7.11e-01 0.0303 0.0815 0.865 DC L1
ENSG00000093134 VNN3 -108512 sc-eQTL 6.23e-01 -0.0498 0.101 0.865 DC L1
ENSG00000112282 MED23 998011 sc-eQTL 9.39e-01 0.00916 0.119 0.865 DC L1
ENSG00000112299 VNN1 -87802 sc-eQTL 2.16e-02 -0.249 0.108 0.865 DC L1
ENSG00000112303 VNN2 -137206 sc-eQTL 9.43e-01 0.0084 0.117 0.865 DC L1
ENSG00000112306 RPS12 -188316 sc-eQTL 1.90e-01 0.0857 0.0651 0.865 DC L1
ENSG00000146409 SLC18B1 -187086 sc-eQTL 5.12e-01 0.0679 0.103 0.865 DC L1
ENSG00000286438 AL591115.1 -476875 sc-eQTL 7.50e-01 0.03 0.0942 0.865 DC L1
ENSG00000079950 STX7 113055 sc-eQTL 4.26e-02 -0.125 0.0612 0.872 Mono L1
ENSG00000093134 VNN3 -108512 sc-eQTL 5.39e-03 -0.293 0.104 0.872 Mono L1
ENSG00000112282 MED23 998011 sc-eQTL 2.14e-01 0.125 0.1 0.872 Mono L1
ENSG00000112299 VNN1 -87802 sc-eQTL 2.81e-08 -0.612 0.106 0.872 Mono L1
ENSG00000112303 VNN2 -137206 sc-eQTL 9.73e-02 0.133 0.08 0.872 Mono L1
ENSG00000112306 RPS12 -188316 sc-eQTL 4.46e-01 0.0368 0.0482 0.872 Mono L1
ENSG00000146409 SLC18B1 -187086 sc-eQTL 3.54e-01 0.0885 0.0953 0.872 Mono L1
ENSG00000079950 STX7 113055 sc-eQTL 3.87e-01 -0.0819 0.0946 0.871 NK L1
ENSG00000112282 MED23 998011 sc-eQTL 4.40e-01 -0.067 0.0865 0.871 NK L1
ENSG00000112303 VNN2 -137206 sc-eQTL 6.26e-01 -0.0575 0.118 0.871 NK L1
ENSG00000112306 RPS12 -188316 sc-eQTL 1.26e-02 0.121 0.0481 0.871 NK L1
ENSG00000079950 STX7 113055 sc-eQTL 4.43e-01 -0.0728 0.0946 0.872 Other_T L1
ENSG00000112282 MED23 998011 sc-eQTL 4.59e-01 0.0877 0.118 0.872 Other_T L1
ENSG00000112303 VNN2 -137206 sc-eQTL 3.63e-01 -0.104 0.114 0.872 Other_T L1
ENSG00000112306 RPS12 -188316 sc-eQTL 1.52e-01 0.065 0.0452 0.872 Other_T L1
ENSG00000146409 SLC18B1 -187086 sc-eQTL 5.77e-01 0.0695 0.124 0.872 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 224778 sc-eQTL 9.29e-01 -0.0119 0.134 0.88 B_Activated L2
ENSG00000079950 STX7 113055 sc-eQTL 4.76e-01 -0.0894 0.125 0.88 B_Activated L2
ENSG00000112282 MED23 998011 sc-eQTL 8.43e-01 0.0275 0.139 0.88 B_Activated L2
ENSG00000112303 VNN2 -137206 sc-eQTL 9.73e-01 0.00445 0.133 0.88 B_Activated L2
ENSG00000112306 RPS12 -188316 sc-eQTL 3.81e-01 0.0626 0.0713 0.88 B_Activated L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 3.61e-01 0.114 0.125 0.88 B_Activated L2
ENSG00000228495 LINC01013 494365 sc-eQTL 4.85e-01 0.0834 0.119 0.88 B_Activated L2
ENSG00000079931 MOXD1 224778 sc-eQTL 4.60e-01 -0.0845 0.114 0.871 B_Intermediate L2
ENSG00000079950 STX7 113055 sc-eQTL 9.57e-01 0.00405 0.0749 0.871 B_Intermediate L2
ENSG00000112282 MED23 998011 sc-eQTL 6.21e-01 -0.0564 0.114 0.871 B_Intermediate L2
ENSG00000112303 VNN2 -137206 sc-eQTL 1.90e-01 0.148 0.112 0.871 B_Intermediate L2
ENSG00000112306 RPS12 -188316 sc-eQTL 4.73e-02 0.136 0.0684 0.871 B_Intermediate L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 4.22e-01 0.1 0.124 0.871 B_Intermediate L2
ENSG00000228495 LINC01013 494365 sc-eQTL 3.86e-01 0.0916 0.106 0.871 B_Intermediate L2
ENSG00000079931 MOXD1 224778 sc-eQTL 1.80e-01 -0.156 0.116 0.873 B_Memory L2
ENSG00000079950 STX7 113055 sc-eQTL 3.99e-01 -0.0773 0.0914 0.873 B_Memory L2
ENSG00000112282 MED23 998011 sc-eQTL 2.32e-01 -0.141 0.118 0.873 B_Memory L2
ENSG00000112303 VNN2 -137206 sc-eQTL 9.51e-01 -0.00736 0.12 0.873 B_Memory L2
ENSG00000112306 RPS12 -188316 sc-eQTL 1.68e-01 0.0794 0.0574 0.873 B_Memory L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 3.78e-02 -0.249 0.119 0.873 B_Memory L2
ENSG00000228495 LINC01013 494365 sc-eQTL 2.03e-01 0.143 0.112 0.873 B_Memory L2
ENSG00000079931 MOXD1 224778 sc-eQTL 1.12e-01 -0.211 0.132 0.872 B_Naive1 L2
ENSG00000079950 STX7 113055 sc-eQTL 4.83e-02 -0.114 0.0576 0.872 B_Naive1 L2
ENSG00000112282 MED23 998011 sc-eQTL 7.16e-01 0.0379 0.104 0.872 B_Naive1 L2
ENSG00000112303 VNN2 -137206 sc-eQTL 2.68e-02 0.249 0.112 0.872 B_Naive1 L2
ENSG00000112306 RPS12 -188316 sc-eQTL 7.45e-03 0.171 0.0632 0.872 B_Naive1 L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 3.68e-01 0.112 0.124 0.872 B_Naive1 L2
ENSG00000228495 LINC01013 494365 sc-eQTL 1.66e-01 0.114 0.0818 0.872 B_Naive1 L2
ENSG00000079931 MOXD1 224778 sc-eQTL 7.16e-01 -0.0458 0.125 0.873 B_Naive2 L2
ENSG00000079950 STX7 113055 sc-eQTL 8.05e-02 -0.119 0.0679 0.873 B_Naive2 L2
ENSG00000112282 MED23 998011 sc-eQTL 7.36e-01 0.0425 0.126 0.873 B_Naive2 L2
ENSG00000112303 VNN2 -137206 sc-eQTL 1.16e-01 0.197 0.125 0.873 B_Naive2 L2
ENSG00000112306 RPS12 -188316 sc-eQTL 2.14e-02 0.152 0.0656 0.873 B_Naive2 L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 9.23e-01 0.0123 0.127 0.873 B_Naive2 L2
ENSG00000228495 LINC01013 494365 sc-eQTL 2.61e-01 0.0988 0.0876 0.873 B_Naive2 L2
ENSG00000079950 STX7 113055 sc-eQTL 9.79e-02 -0.209 0.126 0.873 CD4_CTL L2
ENSG00000112282 MED23 998011 sc-eQTL 5.23e-01 0.0841 0.131 0.873 CD4_CTL L2
ENSG00000112303 VNN2 -137206 sc-eQTL 4.22e-01 -0.103 0.127 0.873 CD4_CTL L2
ENSG00000112306 RPS12 -188316 sc-eQTL 8.89e-02 0.1 0.0586 0.873 CD4_CTL L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 5.60e-01 0.0695 0.119 0.873 CD4_CTL L2
ENSG00000079950 STX7 113055 sc-eQTL 6.59e-01 0.0439 0.0994 0.872 CD4_Naive L2
ENSG00000112282 MED23 998011 sc-eQTL 2.69e-01 0.0938 0.0846 0.872 CD4_Naive L2
ENSG00000112303 VNN2 -137206 sc-eQTL 7.71e-01 -0.0268 0.0921 0.872 CD4_Naive L2
ENSG00000112306 RPS12 -188316 sc-eQTL 5.03e-02 0.117 0.0592 0.872 CD4_Naive L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 9.59e-01 0.00591 0.115 0.872 CD4_Naive L2
ENSG00000079950 STX7 113055 sc-eQTL 1.55e-01 -0.154 0.108 0.872 CD4_TCM L2
ENSG00000112282 MED23 998011 sc-eQTL 5.28e-02 -0.177 0.0908 0.872 CD4_TCM L2
ENSG00000112303 VNN2 -137206 sc-eQTL 5.21e-01 0.069 0.107 0.872 CD4_TCM L2
ENSG00000112306 RPS12 -188316 sc-eQTL 6.57e-03 0.15 0.0547 0.872 CD4_TCM L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 6.24e-01 -0.0633 0.129 0.872 CD4_TCM L2
ENSG00000079950 STX7 113055 sc-eQTL 8.59e-01 0.0222 0.125 0.872 CD4_TEM L2
ENSG00000112282 MED23 998011 sc-eQTL 1.74e-01 0.156 0.115 0.872 CD4_TEM L2
ENSG00000112303 VNN2 -137206 sc-eQTL 3.52e-01 0.112 0.12 0.872 CD4_TEM L2
ENSG00000112306 RPS12 -188316 sc-eQTL 2.14e-02 0.113 0.0486 0.872 CD4_TEM L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 1.88e-01 -0.161 0.122 0.872 CD4_TEM L2
ENSG00000079950 STX7 113055 sc-eQTL 8.19e-01 0.0243 0.106 0.872 CD8_CTL L2
ENSG00000112282 MED23 998011 sc-eQTL 5.28e-02 0.209 0.107 0.872 CD8_CTL L2
ENSG00000112303 VNN2 -137206 sc-eQTL 9.77e-01 0.0035 0.12 0.872 CD8_CTL L2
ENSG00000112306 RPS12 -188316 sc-eQTL 4.00e-04 0.225 0.0624 0.872 CD8_CTL L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 1.60e-01 -0.175 0.124 0.872 CD8_CTL L2
ENSG00000079950 STX7 113055 sc-eQTL 2.71e-01 0.137 0.124 0.872 CD8_Naive L2
ENSG00000112282 MED23 998011 sc-eQTL 7.64e-01 0.0301 0.1 0.872 CD8_Naive L2
ENSG00000112303 VNN2 -137206 sc-eQTL 6.03e-01 0.0559 0.107 0.872 CD8_Naive L2
ENSG00000112306 RPS12 -188316 sc-eQTL 4.42e-02 0.123 0.061 0.872 CD8_Naive L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 1.29e-01 0.187 0.123 0.872 CD8_Naive L2
ENSG00000079950 STX7 113055 sc-eQTL 4.88e-01 -0.0882 0.127 0.87 CD8_TCM L2
ENSG00000112282 MED23 998011 sc-eQTL 5.22e-01 0.0819 0.127 0.87 CD8_TCM L2
ENSG00000112303 VNN2 -137206 sc-eQTL 2.20e-01 -0.155 0.126 0.87 CD8_TCM L2
ENSG00000112306 RPS12 -188316 sc-eQTL 6.52e-02 0.113 0.061 0.87 CD8_TCM L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 7.26e-01 -0.0473 0.135 0.87 CD8_TCM L2
ENSG00000079950 STX7 113055 sc-eQTL 6.64e-01 -0.0585 0.134 0.87 CD8_TEM L2
ENSG00000112282 MED23 998011 sc-eQTL 2.48e-01 0.15 0.129 0.87 CD8_TEM L2
ENSG00000112303 VNN2 -137206 sc-eQTL 5.92e-01 0.0716 0.134 0.87 CD8_TEM L2
ENSG00000112306 RPS12 -188316 sc-eQTL 1.61e-01 0.101 0.0715 0.87 CD8_TEM L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 4.80e-01 -0.0962 0.136 0.87 CD8_TEM L2
ENSG00000079950 STX7 113055 sc-eQTL 4.49e-01 -0.0909 0.12 0.87 MAIT L2
ENSG00000112282 MED23 998011 sc-eQTL 1.29e-03 0.4 0.123 0.87 MAIT L2
ENSG00000112303 VNN2 -137206 sc-eQTL 2.50e-02 -0.273 0.121 0.87 MAIT L2
ENSG00000112306 RPS12 -188316 sc-eQTL 4.95e-03 0.168 0.059 0.87 MAIT L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 3.24e-01 -0.124 0.126 0.87 MAIT L2
ENSG00000079950 STX7 113055 sc-eQTL 1.56e-01 0.183 0.129 0.876 NK_CD56bright L2
ENSG00000112282 MED23 998011 sc-eQTL 7.74e-02 0.241 0.136 0.876 NK_CD56bright L2
ENSG00000112303 VNN2 -137206 sc-eQTL 1.91e-01 0.172 0.131 0.876 NK_CD56bright L2
ENSG00000112306 RPS12 -188316 sc-eQTL 2.41e-01 0.0857 0.0729 0.876 NK_CD56bright L2
ENSG00000079950 STX7 113055 sc-eQTL 1.11e-01 -0.16 0.1 0.875 NK_CD56dim L2
ENSG00000112282 MED23 998011 sc-eQTL 2.32e-01 -0.124 0.103 0.875 NK_CD56dim L2
ENSG00000112303 VNN2 -137206 sc-eQTL 2.28e-01 0.152 0.126 0.875 NK_CD56dim L2
ENSG00000112306 RPS12 -188316 sc-eQTL 4.94e-03 0.139 0.0491 0.875 NK_CD56dim L2
ENSG00000079950 STX7 113055 sc-eQTL 2.89e-02 0.292 0.133 0.884 NK_HLA L2
ENSG00000112282 MED23 998011 sc-eQTL 7.85e-01 -0.037 0.136 0.884 NK_HLA L2
ENSG00000112303 VNN2 -137206 sc-eQTL 3.28e-01 -0.133 0.136 0.884 NK_HLA L2
ENSG00000112306 RPS12 -188316 sc-eQTL 4.01e-01 0.0531 0.0632 0.884 NK_HLA L2
ENSG00000079950 STX7 113055 sc-eQTL 2.24e-01 -0.135 0.111 0.875 NK_cytokine L2
ENSG00000112282 MED23 998011 sc-eQTL 6.09e-01 0.0588 0.115 0.875 NK_cytokine L2
ENSG00000112303 VNN2 -137206 sc-eQTL 9.52e-03 -0.321 0.123 0.875 NK_cytokine L2
ENSG00000112306 RPS12 -188316 sc-eQTL 1.25e-01 0.104 0.0673 0.875 NK_cytokine L2
ENSG00000079931 MOXD1 224778 sc-eQTL 9.27e-01 -0.0117 0.126 0.867 PB L2
ENSG00000079950 STX7 113055 sc-eQTL 9.36e-01 -0.00852 0.106 0.867 PB L2
ENSG00000112282 MED23 998011 sc-eQTL 2.74e-01 0.157 0.143 0.867 PB L2
ENSG00000112303 VNN2 -137206 sc-eQTL 9.28e-01 0.0116 0.129 0.867 PB L2
ENSG00000112306 RPS12 -188316 sc-eQTL 5.39e-02 0.14 0.072 0.867 PB L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 1.76e-01 -0.185 0.136 0.867 PB L2
ENSG00000228495 LINC01013 494365 sc-eQTL 8.52e-01 -0.0168 0.0903 0.867 PB L2
ENSG00000079950 STX7 113055 sc-eQTL 4.33e-01 0.0886 0.113 0.87 Pro_T L2
ENSG00000112282 MED23 998011 sc-eQTL 2.41e-02 -0.285 0.126 0.87 Pro_T L2
ENSG00000112303 VNN2 -137206 sc-eQTL 7.85e-01 -0.0331 0.121 0.87 Pro_T L2
ENSG00000112306 RPS12 -188316 sc-eQTL 1.05e-02 0.117 0.0451 0.87 Pro_T L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 3.94e-01 0.101 0.118 0.87 Pro_T L2
ENSG00000079950 STX7 113055 sc-eQTL 7.28e-01 -0.0429 0.123 0.872 Treg L2
ENSG00000112282 MED23 998011 sc-eQTL 7.78e-01 -0.0357 0.127 0.872 Treg L2
ENSG00000112303 VNN2 -137206 sc-eQTL 8.83e-01 0.0152 0.104 0.872 Treg L2
ENSG00000112306 RPS12 -188316 sc-eQTL 9.97e-01 -0.000189 0.0459 0.872 Treg L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 3.38e-01 0.124 0.129 0.872 Treg L2
ENSG00000079950 STX7 113055 sc-eQTL 5.06e-01 -0.07 0.105 0.868 cDC L2
ENSG00000093134 VNN3 -108512 sc-eQTL 3.75e-01 -0.0928 0.104 0.868 cDC L2
ENSG00000112282 MED23 998011 sc-eQTL 9.48e-01 0.00879 0.136 0.868 cDC L2
ENSG00000112299 VNN1 -87802 sc-eQTL 2.47e-02 -0.274 0.121 0.868 cDC L2
ENSG00000112303 VNN2 -137206 sc-eQTL 6.27e-01 0.0582 0.12 0.868 cDC L2
ENSG00000112306 RPS12 -188316 sc-eQTL 9.43e-02 0.0986 0.0586 0.868 cDC L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 7.11e-01 -0.0435 0.117 0.868 cDC L2
ENSG00000286438 AL591115.1 -476875 sc-eQTL 3.18e-01 0.0934 0.0933 0.868 cDC L2
ENSG00000079950 STX7 113055 sc-eQTL 2.45e-01 -0.0924 0.0793 0.872 cMono_IL1B L2
ENSG00000093134 VNN3 -108512 sc-eQTL 1.69e-02 -0.267 0.111 0.872 cMono_IL1B L2
ENSG00000112282 MED23 998011 sc-eQTL 6.84e-01 0.0453 0.111 0.872 cMono_IL1B L2
ENSG00000112299 VNN1 -87802 sc-eQTL 2.35e-06 -0.522 0.108 0.872 cMono_IL1B L2
ENSG00000112303 VNN2 -137206 sc-eQTL 1.04e-01 0.147 0.0901 0.872 cMono_IL1B L2
ENSG00000112306 RPS12 -188316 sc-eQTL 4.34e-01 0.0394 0.0503 0.872 cMono_IL1B L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 1.09e-01 0.155 0.0966 0.872 cMono_IL1B L2
ENSG00000079950 STX7 113055 sc-eQTL 8.35e-01 -0.0179 0.0856 0.872 cMono_S100A L2
ENSG00000093134 VNN3 -108512 sc-eQTL 1.68e-02 -0.254 0.105 0.872 cMono_S100A L2
ENSG00000112282 MED23 998011 sc-eQTL 3.56e-01 0.107 0.116 0.872 cMono_S100A L2
ENSG00000112299 VNN1 -87802 sc-eQTL 1.28e-06 -0.547 0.11 0.872 cMono_S100A L2
ENSG00000112303 VNN2 -137206 sc-eQTL 1.95e-01 0.0984 0.0757 0.872 cMono_S100A L2
ENSG00000112306 RPS12 -188316 sc-eQTL 4.47e-01 -0.0416 0.0547 0.872 cMono_S100A L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 9.37e-02 -0.169 0.101 0.872 cMono_S100A L2
ENSG00000079950 STX7 113055 sc-eQTL 8.86e-01 0.0199 0.139 0.864 gdT L2
ENSG00000112282 MED23 998011 sc-eQTL 1.86e-01 -0.196 0.148 0.864 gdT L2
ENSG00000112303 VNN2 -137206 sc-eQTL 6.08e-01 0.0788 0.153 0.864 gdT L2
ENSG00000112306 RPS12 -188316 sc-eQTL 1.14e-01 0.0922 0.0579 0.864 gdT L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 9.85e-03 0.386 0.147 0.864 gdT L2
ENSG00000079950 STX7 113055 sc-eQTL 4.28e-01 -0.0926 0.117 0.867 intMono L2
ENSG00000093134 VNN3 -108512 sc-eQTL 5.38e-01 -0.0726 0.118 0.867 intMono L2
ENSG00000112282 MED23 998011 sc-eQTL 2.40e-02 0.291 0.128 0.867 intMono L2
ENSG00000112299 VNN1 -87802 sc-eQTL 3.42e-02 -0.246 0.115 0.867 intMono L2
ENSG00000112303 VNN2 -137206 sc-eQTL 3.05e-01 0.121 0.118 0.867 intMono L2
ENSG00000112306 RPS12 -188316 sc-eQTL 2.36e-01 0.061 0.0513 0.867 intMono L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 4.50e-01 0.0947 0.125 0.867 intMono L2
ENSG00000079950 STX7 113055 sc-eQTL 1.19e-01 -0.136 0.087 0.871 ncMono L2
ENSG00000093134 VNN3 -108512 sc-eQTL 2.28e-01 -0.149 0.123 0.871 ncMono L2
ENSG00000112282 MED23 998011 sc-eQTL 7.12e-01 -0.0463 0.125 0.871 ncMono L2
ENSG00000112299 VNN1 -87802 sc-eQTL 8.65e-05 -0.473 0.118 0.871 ncMono L2
ENSG00000112303 VNN2 -137206 sc-eQTL 8.98e-01 0.0152 0.118 0.871 ncMono L2
ENSG00000112306 RPS12 -188316 sc-eQTL 1.42e-01 0.0867 0.0588 0.871 ncMono L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 8.35e-02 0.18 0.104 0.871 ncMono L2
ENSG00000079950 STX7 113055 sc-eQTL 7.66e-01 0.0313 0.105 0.881 pDC L2
ENSG00000093134 VNN3 -108512 sc-eQTL 7.98e-01 0.0271 0.105 0.881 pDC L2
ENSG00000112282 MED23 998011 sc-eQTL 6.19e-01 -0.0732 0.147 0.881 pDC L2
ENSG00000112299 VNN1 -87802 sc-eQTL 3.17e-01 -0.107 0.107 0.881 pDC L2
ENSG00000112303 VNN2 -137206 sc-eQTL 1.18e-01 -0.199 0.127 0.881 pDC L2
ENSG00000112306 RPS12 -188316 sc-eQTL 4.20e-01 0.071 0.0878 0.881 pDC L2
ENSG00000146409 SLC18B1 -187086 sc-eQTL 1.76e-01 0.176 0.13 0.881 pDC L2
ENSG00000286438 AL591115.1 -476875 sc-eQTL 8.58e-01 0.0223 0.125 0.881 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 224778 sc-eQTL 3.02e-01 -0.128 0.123 0.872 B_Memory LOneK1K
ENSG00000079950 STX7 113055 sc-eQTL 7.56e-01 -0.0218 0.0701 0.872 B_Memory LOneK1K
ENSG00000112282 MED23 998011 sc-eQTL 3.99e-01 -0.0906 0.107 0.872 B_Memory LOneK1K
ENSG00000112303 VNN2 -137206 sc-eQTL 4.56e-01 0.0827 0.111 0.872 B_Memory LOneK1K
ENSG00000112306 RPS12 -188316 sc-eQTL 8.90e-02 0.107 0.0628 0.872 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -187086 sc-eQTL 9.22e-01 0.0114 0.116 0.872 B_Memory LOneK1K
ENSG00000228495 LINC01013 494365 sc-eQTL 2.44e-01 0.13 0.112 0.872 B_Memory LOneK1K
ENSG00000079931 MOXD1 224778 sc-eQTL 4.63e-01 -0.0975 0.132 0.872 B_Naive LOneK1K
ENSG00000079950 STX7 113055 sc-eQTL 3.10e-02 -0.117 0.0538 0.872 B_Naive LOneK1K
ENSG00000112282 MED23 998011 sc-eQTL 7.68e-01 0.0301 0.102 0.872 B_Naive LOneK1K
ENSG00000112303 VNN2 -137206 sc-eQTL 6.11e-03 0.287 0.104 0.872 B_Naive LOneK1K
ENSG00000112306 RPS12 -188316 sc-eQTL 4.41e-03 0.18 0.0627 0.872 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -187086 sc-eQTL 4.61e-01 0.089 0.12 0.872 B_Naive LOneK1K
ENSG00000228495 LINC01013 494365 sc-eQTL 6.30e-02 0.142 0.076 0.872 B_Naive LOneK1K
ENSG00000079950 STX7 113055 sc-eQTL 2.07e-01 -0.0837 0.0662 0.872 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -108512 sc-eQTL 4.10e-03 -0.308 0.106 0.872 CD14_Mono LOneK1K
ENSG00000112282 MED23 998011 sc-eQTL 3.01e-01 0.108 0.104 0.872 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -87802 sc-eQTL 1.87e-07 -0.571 0.106 0.872 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -137206 sc-eQTL 1.02e-01 0.122 0.0742 0.872 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -188316 sc-eQTL 7.88e-01 0.0138 0.0512 0.872 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -187086 sc-eQTL 7.98e-01 0.0233 0.0911 0.872 CD14_Mono LOneK1K
ENSG00000079950 STX7 113055 sc-eQTL 1.04e-01 -0.132 0.081 0.871 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -108512 sc-eQTL 8.02e-02 -0.209 0.119 0.871 CD16_Mono LOneK1K
ENSG00000112282 MED23 998011 sc-eQTL 1.75e-01 0.158 0.116 0.871 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -87802 sc-eQTL 3.85e-06 -0.536 0.113 0.871 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -137206 sc-eQTL 6.48e-01 0.0512 0.112 0.871 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -188316 sc-eQTL 1.25e-01 0.0728 0.0473 0.871 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -187086 sc-eQTL 1.72e-02 0.273 0.114 0.871 CD16_Mono LOneK1K
ENSG00000079950 STX7 113055 sc-eQTL 1.26e-01 -0.146 0.0951 0.875 NK_CD56dim LOneK1K
ENSG00000112282 MED23 998011 sc-eQTL 4.29e-01 -0.0735 0.0927 0.875 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -137206 sc-eQTL 4.70e-01 -0.0876 0.121 0.875 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -188316 sc-eQTL 4.60e-03 0.139 0.0485 0.875 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 113055 eQTL 7.23e-19 -0.217 0.0239 0.0 0.0 0.107
ENSG00000112299 VNN1 -87802 pQTL 7.370000000000001e-27 -0.558 0.0508 0.0 0.0 0.113
ENSG00000112299 VNN1 -87802 eQTL 5.97e-17 -0.28 0.0329 0.014 0.0 0.107
ENSG00000112303 VNN2 -137206 pQTL 0.000577 0.131 0.0381 0.0 0.0 0.113

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079950 STX7 113055 4.54e-06 4.77e-06 8.35e-07 2.65e-06 1.62e-06 1.63e-06 4.48e-06 9.8e-07 4.99e-06 2.42e-06 5.26e-06 3.31e-06 7.03e-06 2.4e-06 1.49e-06 3.41e-06 1.78e-06 3.49e-06 1.5e-06 1.16e-06 3.04e-06 4.79e-06 4.37e-06 1.39e-06 6.48e-06 1.95e-06 2.49e-06 1.77e-06 4.47e-06 4.3e-06 2.7e-06 5.42e-07 5.21e-07 1.59e-06 2.22e-06 9.86e-07 9.48e-07 4.57e-07 8.68e-07 4.23e-07 7.35e-07 5.7e-06 3.83e-07 1.53e-07 5.94e-07 7.78e-07 1.03e-06 5.52e-07 4.23e-07
ENSG00000112299 VNN1 -87802 4.85e-06 5.49e-06 6.33e-07 3.5e-06 1.66e-06 1.52e-06 7.75e-06 1.26e-06 4.8e-06 2.92e-06 7.34e-06 2.9e-06 9.33e-06 2.13e-06 9.73e-07 3.77e-06 2.75e-06 3.74e-06 1.65e-06 1.72e-06 2.55e-06 5.63e-06 4.66e-06 2.06e-06 9.05e-06 2.12e-06 2.65e-06 1.73e-06 6.27e-06 6.7e-06 2.6e-06 4.43e-07 8.01e-07 2.38e-06 2.01e-06 1.3e-06 1.12e-06 5.24e-07 1.12e-06 7.42e-07 8.61e-07 7.37e-06 6.3e-07 1.66e-07 7.77e-07 1.1e-06 1.07e-06 6.8e-07 5.92e-07