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Genes within 1Mb (chr6:132572573:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 171098 sc-eQTL 5.67e-03 -0.235 0.0841 0.434 B L1
ENSG00000079950 STX7 59375 sc-eQTL 3.18e-01 -0.0322 0.0322 0.434 B L1
ENSG00000112282 MED23 944331 sc-eQTL 8.82e-01 -0.00958 0.0644 0.434 B L1
ENSG00000112303 VNN2 -190886 sc-eQTL 1.15e-02 0.152 0.0598 0.434 B L1
ENSG00000112306 RPS12 -241996 sc-eQTL 2.62e-01 -0.0411 0.0366 0.434 B L1
ENSG00000146409 SLC18B1 -240766 sc-eQTL 2.62e-01 0.0865 0.077 0.434 B L1
ENSG00000228495 LINC01013 440685 sc-eQTL 7.05e-01 0.0192 0.0507 0.434 B L1
ENSG00000079950 STX7 59375 sc-eQTL 1.51e-01 -0.0892 0.0619 0.434 CD4T L1
ENSG00000112282 MED23 944331 sc-eQTL 2.27e-01 -0.0596 0.0492 0.434 CD4T L1
ENSG00000112303 VNN2 -190886 sc-eQTL 5.48e-01 0.0324 0.0539 0.434 CD4T L1
ENSG00000112306 RPS12 -241996 sc-eQTL 3.59e-01 -0.0336 0.0366 0.434 CD4T L1
ENSG00000146409 SLC18B1 -240766 sc-eQTL 2.20e-01 0.0908 0.0739 0.434 CD4T L1
ENSG00000079950 STX7 59375 sc-eQTL 1.16e-01 -0.0962 0.061 0.434 CD8T L1
ENSG00000112282 MED23 944331 sc-eQTL 1.67e-01 -0.0834 0.0602 0.434 CD8T L1
ENSG00000112303 VNN2 -190886 sc-eQTL 8.01e-02 0.125 0.0711 0.434 CD8T L1
ENSG00000112306 RPS12 -241996 sc-eQTL 5.39e-01 -0.015 0.0245 0.434 CD8T L1
ENSG00000146409 SLC18B1 -240766 sc-eQTL 2.22e-01 0.0903 0.0737 0.434 CD8T L1
ENSG00000079950 STX7 59375 sc-eQTL 1.14e-01 0.0904 0.0569 0.421 DC L1
ENSG00000093134 VNN3 -162192 sc-eQTL 1.84e-01 0.0942 0.0707 0.421 DC L1
ENSG00000112282 MED23 944331 sc-eQTL 2.83e-01 -0.0895 0.0831 0.421 DC L1
ENSG00000112299 VNN1 -141482 sc-eQTL 3.28e-02 -0.163 0.0758 0.421 DC L1
ENSG00000112303 VNN2 -190886 sc-eQTL 1.84e-01 0.109 0.0817 0.421 DC L1
ENSG00000112306 RPS12 -241996 sc-eQTL 2.52e-01 0.0526 0.0458 0.421 DC L1
ENSG00000146409 SLC18B1 -240766 sc-eQTL 9.67e-01 0.00302 0.0728 0.421 DC L1
ENSG00000286438 AL591115.1 -530555 sc-eQTL 9.87e-01 -0.00111 0.0662 0.421 DC L1
ENSG00000079950 STX7 59375 sc-eQTL 9.41e-01 0.00316 0.0424 0.434 Mono L1
ENSG00000093134 VNN3 -162192 sc-eQTL 8.72e-01 -0.0117 0.0728 0.434 Mono L1
ENSG00000112282 MED23 944331 sc-eQTL 1.02e-01 -0.113 0.0687 0.434 Mono L1
ENSG00000112299 VNN1 -141482 sc-eQTL 1.48e-01 -0.113 0.0779 0.434 Mono L1
ENSG00000112303 VNN2 -190886 sc-eQTL 1.58e-01 0.078 0.055 0.434 Mono L1
ENSG00000112306 RPS12 -241996 sc-eQTL 8.00e-01 -0.00841 0.0331 0.434 Mono L1
ENSG00000146409 SLC18B1 -240766 sc-eQTL 7.59e-01 -0.0201 0.0655 0.434 Mono L1
ENSG00000079950 STX7 59375 sc-eQTL 7.60e-02 -0.113 0.0635 0.431 NK L1
ENSG00000112282 MED23 944331 sc-eQTL 8.17e-01 0.0135 0.0585 0.431 NK L1
ENSG00000112303 VNN2 -190886 sc-eQTL 3.00e-01 0.0825 0.0794 0.431 NK L1
ENSG00000112306 RPS12 -241996 sc-eQTL 9.01e-01 -0.00411 0.033 0.431 NK L1
ENSG00000079950 STX7 59375 sc-eQTL 1.62e-01 0.088 0.0627 0.434 Other_T L1
ENSG00000112282 MED23 944331 sc-eQTL 8.61e-01 0.0138 0.0787 0.434 Other_T L1
ENSG00000112303 VNN2 -190886 sc-eQTL 4.30e-01 0.0601 0.0761 0.434 Other_T L1
ENSG00000112306 RPS12 -241996 sc-eQTL 5.32e-01 -0.0189 0.0302 0.434 Other_T L1
ENSG00000146409 SLC18B1 -240766 sc-eQTL 8.45e-01 0.0162 0.0827 0.434 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 171098 sc-eQTL 1.69e-01 -0.124 0.0895 0.439 B_Activated L2
ENSG00000079950 STX7 59375 sc-eQTL 1.97e-01 -0.109 0.084 0.439 B_Activated L2
ENSG00000112282 MED23 944331 sc-eQTL 9.21e-01 0.00924 0.0935 0.439 B_Activated L2
ENSG00000112303 VNN2 -190886 sc-eQTL 7.28e-02 0.161 0.089 0.439 B_Activated L2
ENSG00000112306 RPS12 -241996 sc-eQTL 7.30e-01 -0.0166 0.0481 0.439 B_Activated L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 5.19e-02 0.163 0.0834 0.439 B_Activated L2
ENSG00000228495 LINC01013 440685 sc-eQTL 2.58e-01 -0.0908 0.0801 0.439 B_Activated L2
ENSG00000079931 MOXD1 171098 sc-eQTL 5.45e-02 -0.153 0.0793 0.436 B_Intermediate L2
ENSG00000079950 STX7 59375 sc-eQTL 1.13e-01 -0.0829 0.052 0.436 B_Intermediate L2
ENSG00000112282 MED23 944331 sc-eQTL 8.13e-01 0.0189 0.0796 0.436 B_Intermediate L2
ENSG00000112303 VNN2 -190886 sc-eQTL 3.32e-01 0.0765 0.0787 0.436 B_Intermediate L2
ENSG00000112306 RPS12 -241996 sc-eQTL 5.66e-01 -0.0278 0.0482 0.436 B_Intermediate L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 7.13e-01 0.032 0.0869 0.436 B_Intermediate L2
ENSG00000228495 LINC01013 440685 sc-eQTL 3.19e-01 0.0736 0.0737 0.436 B_Intermediate L2
ENSG00000079931 MOXD1 171098 sc-eQTL 6.08e-01 -0.0408 0.0793 0.431 B_Memory L2
ENSG00000079950 STX7 59375 sc-eQTL 6.65e-02 -0.114 0.0618 0.431 B_Memory L2
ENSG00000112282 MED23 944331 sc-eQTL 7.68e-01 -0.0237 0.0802 0.431 B_Memory L2
ENSG00000112303 VNN2 -190886 sc-eQTL 2.91e-01 0.086 0.0812 0.431 B_Memory L2
ENSG00000112306 RPS12 -241996 sc-eQTL 3.29e-01 -0.0383 0.0392 0.431 B_Memory L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 8.67e-01 0.0138 0.0819 0.431 B_Memory L2
ENSG00000228495 LINC01013 440685 sc-eQTL 8.41e-01 0.0154 0.0763 0.431 B_Memory L2
ENSG00000079931 MOXD1 171098 sc-eQTL 1.25e-03 -0.286 0.0874 0.434 B_Naive1 L2
ENSG00000079950 STX7 59375 sc-eQTL 4.72e-01 -0.0282 0.0391 0.434 B_Naive1 L2
ENSG00000112282 MED23 944331 sc-eQTL 7.76e-01 0.02 0.0701 0.434 B_Naive1 L2
ENSG00000112303 VNN2 -190886 sc-eQTL 4.56e-01 0.0567 0.0759 0.434 B_Naive1 L2
ENSG00000112306 RPS12 -241996 sc-eQTL 6.33e-01 -0.0207 0.0433 0.434 B_Naive1 L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 1.63e-01 0.116 0.0831 0.434 B_Naive1 L2
ENSG00000228495 LINC01013 440685 sc-eQTL 4.40e-01 0.0427 0.0552 0.434 B_Naive1 L2
ENSG00000079931 MOXD1 171098 sc-eQTL 9.72e-01 0.003 0.0844 0.431 B_Naive2 L2
ENSG00000079950 STX7 59375 sc-eQTL 5.19e-01 -0.0297 0.0459 0.431 B_Naive2 L2
ENSG00000112282 MED23 944331 sc-eQTL 7.80e-01 -0.0238 0.0849 0.431 B_Naive2 L2
ENSG00000112303 VNN2 -190886 sc-eQTL 6.96e-02 0.153 0.0838 0.431 B_Naive2 L2
ENSG00000112306 RPS12 -241996 sc-eQTL 4.05e-01 -0.0372 0.0446 0.431 B_Naive2 L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 5.03e-01 0.0572 0.0852 0.431 B_Naive2 L2
ENSG00000228495 LINC01013 440685 sc-eQTL 9.13e-01 -0.00648 0.0591 0.431 B_Naive2 L2
ENSG00000079950 STX7 59375 sc-eQTL 1.64e-01 -0.121 0.0864 0.425 CD4_CTL L2
ENSG00000112282 MED23 944331 sc-eQTL 8.99e-01 -0.0115 0.0902 0.425 CD4_CTL L2
ENSG00000112303 VNN2 -190886 sc-eQTL 5.64e-02 0.166 0.0867 0.425 CD4_CTL L2
ENSG00000112306 RPS12 -241996 sc-eQTL 6.75e-01 0.017 0.0404 0.425 CD4_CTL L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 1.50e-02 -0.197 0.0803 0.425 CD4_CTL L2
ENSG00000079950 STX7 59375 sc-eQTL 5.97e-01 -0.0355 0.0671 0.434 CD4_Naive L2
ENSG00000112282 MED23 944331 sc-eQTL 4.77e-01 -0.0407 0.0572 0.434 CD4_Naive L2
ENSG00000112303 VNN2 -190886 sc-eQTL 3.77e-01 0.0549 0.0621 0.434 CD4_Naive L2
ENSG00000112306 RPS12 -241996 sc-eQTL 4.38e-01 -0.0313 0.0403 0.434 CD4_Naive L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 4.74e-01 0.0556 0.0775 0.434 CD4_Naive L2
ENSG00000079950 STX7 59375 sc-eQTL 2.33e-01 -0.0885 0.074 0.434 CD4_TCM L2
ENSG00000112282 MED23 944331 sc-eQTL 3.29e-01 -0.0609 0.0623 0.434 CD4_TCM L2
ENSG00000112303 VNN2 -190886 sc-eQTL 8.77e-01 -0.0114 0.0732 0.434 CD4_TCM L2
ENSG00000112306 RPS12 -241996 sc-eQTL 3.38e-01 -0.0364 0.0379 0.434 CD4_TCM L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 6.01e-02 0.165 0.0871 0.434 CD4_TCM L2
ENSG00000079950 STX7 59375 sc-eQTL 8.71e-01 -0.0141 0.0863 0.434 CD4_TEM L2
ENSG00000112282 MED23 944331 sc-eQTL 5.63e-01 -0.046 0.0794 0.434 CD4_TEM L2
ENSG00000112303 VNN2 -190886 sc-eQTL 8.48e-02 -0.142 0.0823 0.434 CD4_TEM L2
ENSG00000112306 RPS12 -241996 sc-eQTL 2.64e-01 -0.0379 0.0339 0.434 CD4_TEM L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 8.76e-01 0.0132 0.0844 0.434 CD4_TEM L2
ENSG00000079950 STX7 59375 sc-eQTL 7.24e-01 -0.025 0.0706 0.434 CD8_CTL L2
ENSG00000112282 MED23 944331 sc-eQTL 4.58e-01 -0.0537 0.0723 0.434 CD8_CTL L2
ENSG00000112303 VNN2 -190886 sc-eQTL 6.10e-02 0.15 0.0796 0.434 CD8_CTL L2
ENSG00000112306 RPS12 -241996 sc-eQTL 1.56e-01 -0.0608 0.0427 0.434 CD8_CTL L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 1.65e-01 0.115 0.0828 0.434 CD8_CTL L2
ENSG00000079950 STX7 59375 sc-eQTL 2.22e-02 -0.197 0.0855 0.434 CD8_Naive L2
ENSG00000112282 MED23 944331 sc-eQTL 2.42e-01 -0.0815 0.0694 0.434 CD8_Naive L2
ENSG00000112303 VNN2 -190886 sc-eQTL 5.22e-01 0.0479 0.0746 0.434 CD8_Naive L2
ENSG00000112306 RPS12 -241996 sc-eQTL 3.63e-01 -0.0389 0.0427 0.434 CD8_Naive L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 5.20e-01 0.0553 0.0857 0.434 CD8_Naive L2
ENSG00000079950 STX7 59375 sc-eQTL 6.99e-01 -0.0328 0.0846 0.431 CD8_TCM L2
ENSG00000112282 MED23 944331 sc-eQTL 4.15e-01 -0.0693 0.0848 0.431 CD8_TCM L2
ENSG00000112303 VNN2 -190886 sc-eQTL 7.89e-01 0.0225 0.084 0.431 CD8_TCM L2
ENSG00000112306 RPS12 -241996 sc-eQTL 8.76e-01 -0.00641 0.041 0.431 CD8_TCM L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 3.06e-02 0.193 0.0887 0.431 CD8_TCM L2
ENSG00000079950 STX7 59375 sc-eQTL 5.71e-01 -0.0504 0.0889 0.429 CD8_TEM L2
ENSG00000112282 MED23 944331 sc-eQTL 4.03e-01 -0.0716 0.0855 0.429 CD8_TEM L2
ENSG00000112303 VNN2 -190886 sc-eQTL 5.58e-02 0.169 0.0876 0.429 CD8_TEM L2
ENSG00000112306 RPS12 -241996 sc-eQTL 9.05e-01 -0.00569 0.0476 0.429 CD8_TEM L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 3.73e-01 0.0801 0.0898 0.429 CD8_TEM L2
ENSG00000079950 STX7 59375 sc-eQTL 6.91e-01 -0.0324 0.0814 0.429 MAIT L2
ENSG00000112282 MED23 944331 sc-eQTL 7.65e-01 -0.0255 0.0852 0.429 MAIT L2
ENSG00000112303 VNN2 -190886 sc-eQTL 6.76e-01 0.0346 0.0828 0.429 MAIT L2
ENSG00000112306 RPS12 -241996 sc-eQTL 2.25e-01 0.0494 0.0406 0.429 MAIT L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 6.87e-01 -0.0345 0.0854 0.429 MAIT L2
ENSG00000079950 STX7 59375 sc-eQTL 5.57e-01 -0.0497 0.0845 0.424 NK_CD56bright L2
ENSG00000112282 MED23 944331 sc-eQTL 7.53e-01 -0.0282 0.0895 0.424 NK_CD56bright L2
ENSG00000112303 VNN2 -190886 sc-eQTL 4.73e-01 0.0616 0.0858 0.424 NK_CD56bright L2
ENSG00000112306 RPS12 -241996 sc-eQTL 2.01e-01 -0.0612 0.0477 0.424 NK_CD56bright L2
ENSG00000079950 STX7 59375 sc-eQTL 9.41e-02 -0.115 0.0685 0.431 NK_CD56dim L2
ENSG00000112282 MED23 944331 sc-eQTL 4.96e-01 0.0483 0.0708 0.431 NK_CD56dim L2
ENSG00000112303 VNN2 -190886 sc-eQTL 7.63e-02 0.153 0.0856 0.431 NK_CD56dim L2
ENSG00000112306 RPS12 -241996 sc-eQTL 7.34e-01 0.0117 0.0342 0.431 NK_CD56dim L2
ENSG00000079950 STX7 59375 sc-eQTL 9.28e-01 0.00762 0.0846 0.438 NK_HLA L2
ENSG00000112282 MED23 944331 sc-eQTL 6.99e-01 0.0331 0.0854 0.438 NK_HLA L2
ENSG00000112303 VNN2 -190886 sc-eQTL 1.58e-01 0.121 0.0852 0.438 NK_HLA L2
ENSG00000112306 RPS12 -241996 sc-eQTL 7.86e-01 0.0109 0.0399 0.438 NK_HLA L2
ENSG00000079950 STX7 59375 sc-eQTL 3.02e-02 -0.16 0.0734 0.431 NK_cytokine L2
ENSG00000112282 MED23 944331 sc-eQTL 8.99e-01 0.0098 0.0767 0.431 NK_cytokine L2
ENSG00000112303 VNN2 -190886 sc-eQTL 1.85e-01 -0.11 0.0831 0.431 NK_cytokine L2
ENSG00000112306 RPS12 -241996 sc-eQTL 9.50e-01 -0.00285 0.0453 0.431 NK_cytokine L2
ENSG00000079931 MOXD1 171098 sc-eQTL 3.54e-01 -0.0859 0.0924 0.419 PB L2
ENSG00000079950 STX7 59375 sc-eQTL 6.41e-01 0.0362 0.0773 0.419 PB L2
ENSG00000112282 MED23 944331 sc-eQTL 9.41e-01 -0.0078 0.105 0.419 PB L2
ENSG00000112303 VNN2 -190886 sc-eQTL 9.02e-01 0.0117 0.0946 0.419 PB L2
ENSG00000112306 RPS12 -241996 sc-eQTL 9.57e-01 0.00293 0.0537 0.419 PB L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 8.80e-01 0.0152 0.101 0.419 PB L2
ENSG00000228495 LINC01013 440685 sc-eQTL 7.51e-01 -0.021 0.0661 0.419 PB L2
ENSG00000079950 STX7 59375 sc-eQTL 1.02e-01 0.123 0.0752 0.437 Pro_T L2
ENSG00000112282 MED23 944331 sc-eQTL 9.95e-01 -0.000489 0.0851 0.437 Pro_T L2
ENSG00000112303 VNN2 -190886 sc-eQTL 3.73e-01 -0.0723 0.081 0.437 Pro_T L2
ENSG00000112306 RPS12 -241996 sc-eQTL 6.23e-01 -0.0151 0.0307 0.437 Pro_T L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 8.86e-01 0.0114 0.0795 0.437 Pro_T L2
ENSG00000079950 STX7 59375 sc-eQTL 4.48e-01 0.0631 0.083 0.434 Treg L2
ENSG00000112282 MED23 944331 sc-eQTL 3.02e-01 -0.0881 0.0852 0.434 Treg L2
ENSG00000112303 VNN2 -190886 sc-eQTL 7.41e-01 -0.0231 0.0699 0.434 Treg L2
ENSG00000112306 RPS12 -241996 sc-eQTL 5.06e-01 -0.0206 0.0309 0.434 Treg L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 5.85e-01 0.0477 0.0873 0.434 Treg L2
ENSG00000079950 STX7 59375 sc-eQTL 1.30e-01 0.111 0.0733 0.427 cDC L2
ENSG00000093134 VNN3 -162192 sc-eQTL 3.14e-01 0.0738 0.073 0.427 cDC L2
ENSG00000112282 MED23 944331 sc-eQTL 8.85e-01 0.0138 0.0953 0.427 cDC L2
ENSG00000112299 VNN1 -141482 sc-eQTL 9.36e-04 -0.281 0.0836 0.427 cDC L2
ENSG00000112303 VNN2 -190886 sc-eQTL 3.90e-01 0.0722 0.0837 0.427 cDC L2
ENSG00000112306 RPS12 -241996 sc-eQTL 2.00e-01 0.053 0.0412 0.427 cDC L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 4.30e-01 0.0648 0.0819 0.427 cDC L2
ENSG00000286438 AL591115.1 -530555 sc-eQTL 8.51e-01 -0.0123 0.0656 0.427 cDC L2
ENSG00000079950 STX7 59375 sc-eQTL 7.13e-01 0.0201 0.0547 0.434 cMono_IL1B L2
ENSG00000093134 VNN3 -162192 sc-eQTL 8.20e-01 0.0176 0.0773 0.434 cMono_IL1B L2
ENSG00000112282 MED23 944331 sc-eQTL 2.36e-01 -0.0905 0.0762 0.434 cMono_IL1B L2
ENSG00000112299 VNN1 -141482 sc-eQTL 2.68e-01 -0.0863 0.0778 0.434 cMono_IL1B L2
ENSG00000112303 VNN2 -190886 sc-eQTL 2.18e-01 0.0767 0.0621 0.434 cMono_IL1B L2
ENSG00000112306 RPS12 -241996 sc-eQTL 8.81e-01 0.00519 0.0346 0.434 cMono_IL1B L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 7.27e-01 -0.0234 0.0668 0.434 cMono_IL1B L2
ENSG00000079950 STX7 59375 sc-eQTL 7.80e-01 -0.0165 0.0591 0.434 cMono_S100A L2
ENSG00000093134 VNN3 -162192 sc-eQTL 9.93e-01 -0.000651 0.0738 0.434 cMono_S100A L2
ENSG00000112282 MED23 944331 sc-eQTL 4.67e-01 -0.0583 0.08 0.434 cMono_S100A L2
ENSG00000112299 VNN1 -141482 sc-eQTL 2.54e-01 -0.0914 0.0798 0.434 cMono_S100A L2
ENSG00000112303 VNN2 -190886 sc-eQTL 7.09e-01 0.0196 0.0524 0.434 cMono_S100A L2
ENSG00000112306 RPS12 -241996 sc-eQTL 2.85e-01 0.0404 0.0377 0.434 cMono_S100A L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 4.20e-01 -0.0564 0.0698 0.434 cMono_S100A L2
ENSG00000079950 STX7 59375 sc-eQTL 1.01e-01 0.162 0.0978 0.43 gdT L2
ENSG00000112282 MED23 944331 sc-eQTL 5.09e-01 -0.0699 0.106 0.43 gdT L2
ENSG00000112303 VNN2 -190886 sc-eQTL 2.04e-01 0.139 0.109 0.43 gdT L2
ENSG00000112306 RPS12 -241996 sc-eQTL 8.48e-01 -0.008 0.0416 0.43 gdT L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 2.58e-01 0.121 0.107 0.43 gdT L2
ENSG00000079950 STX7 59375 sc-eQTL 5.87e-01 -0.0437 0.0803 0.431 intMono L2
ENSG00000093134 VNN3 -162192 sc-eQTL 6.80e-01 -0.0335 0.0811 0.431 intMono L2
ENSG00000112282 MED23 944331 sc-eQTL 7.47e-01 -0.0288 0.0891 0.431 intMono L2
ENSG00000112299 VNN1 -141482 sc-eQTL 5.81e-01 -0.0443 0.0802 0.431 intMono L2
ENSG00000112303 VNN2 -190886 sc-eQTL 2.39e-01 0.0959 0.0813 0.431 intMono L2
ENSG00000112306 RPS12 -241996 sc-eQTL 6.72e-01 0.015 0.0355 0.431 intMono L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 5.40e-01 0.0529 0.0863 0.431 intMono L2
ENSG00000079950 STX7 59375 sc-eQTL 5.06e-01 -0.039 0.0585 0.425 ncMono L2
ENSG00000093134 VNN3 -162192 sc-eQTL 3.20e-01 -0.0823 0.0825 0.425 ncMono L2
ENSG00000112282 MED23 944331 sc-eQTL 8.67e-02 -0.143 0.0831 0.425 ncMono L2
ENSG00000112299 VNN1 -141482 sc-eQTL 2.85e-01 -0.0878 0.0818 0.425 ncMono L2
ENSG00000112303 VNN2 -190886 sc-eQTL 6.47e-01 0.0362 0.0789 0.425 ncMono L2
ENSG00000112306 RPS12 -241996 sc-eQTL 8.90e-01 0.00548 0.0396 0.425 ncMono L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 9.85e-01 0.00129 0.0699 0.425 ncMono L2
ENSG00000079950 STX7 59375 sc-eQTL 8.08e-01 0.0168 0.0691 0.429 pDC L2
ENSG00000093134 VNN3 -162192 sc-eQTL 3.77e-01 0.0615 0.0694 0.429 pDC L2
ENSG00000112282 MED23 944331 sc-eQTL 2.21e-02 -0.221 0.0954 0.429 pDC L2
ENSG00000112299 VNN1 -141482 sc-eQTL 2.67e-01 0.0785 0.0705 0.429 pDC L2
ENSG00000112303 VNN2 -190886 sc-eQTL 8.53e-01 -0.0157 0.0843 0.429 pDC L2
ENSG00000112306 RPS12 -241996 sc-eQTL 2.13e-01 0.0723 0.0578 0.429 pDC L2
ENSG00000146409 SLC18B1 -240766 sc-eQTL 7.99e-01 -0.0219 0.0859 0.429 pDC L2
ENSG00000286438 AL591115.1 -530555 sc-eQTL 8.64e-01 0.0141 0.0822 0.429 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 171098 sc-eQTL 2.29e-01 -0.101 0.0836 0.434 B_Memory LOneK1K
ENSG00000079950 STX7 59375 sc-eQTL 1.41e-02 -0.116 0.0468 0.434 B_Memory LOneK1K
ENSG00000112282 MED23 944331 sc-eQTL 8.28e-01 -0.0158 0.0727 0.434 B_Memory LOneK1K
ENSG00000112303 VNN2 -190886 sc-eQTL 7.01e-02 0.136 0.0746 0.434 B_Memory LOneK1K
ENSG00000112306 RPS12 -241996 sc-eQTL 4.20e-01 -0.0345 0.0428 0.434 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -240766 sc-eQTL 3.81e-01 0.0688 0.0785 0.434 B_Memory LOneK1K
ENSG00000228495 LINC01013 440685 sc-eQTL 8.77e-01 0.0118 0.0758 0.434 B_Memory LOneK1K
ENSG00000079931 MOXD1 171098 sc-eQTL 3.37e-02 -0.189 0.0884 0.434 B_Naive LOneK1K
ENSG00000079950 STX7 59375 sc-eQTL 4.32e-01 -0.0288 0.0366 0.434 B_Naive LOneK1K
ENSG00000112282 MED23 944331 sc-eQTL 8.96e-01 0.00901 0.0689 0.434 B_Naive LOneK1K
ENSG00000112303 VNN2 -190886 sc-eQTL 6.06e-02 0.133 0.0706 0.434 B_Naive LOneK1K
ENSG00000112306 RPS12 -241996 sc-eQTL 4.44e-01 -0.033 0.043 0.434 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -240766 sc-eQTL 1.13e-01 0.129 0.0808 0.434 B_Naive LOneK1K
ENSG00000228495 LINC01013 440685 sc-eQTL 5.65e-01 0.0298 0.0516 0.434 B_Naive LOneK1K
ENSG00000079950 STX7 59375 sc-eQTL 6.31e-01 0.0219 0.0455 0.434 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -162192 sc-eQTL 8.76e-01 0.0115 0.0742 0.434 CD14_Mono LOneK1K
ENSG00000112282 MED23 944331 sc-eQTL 2.20e-01 -0.0874 0.071 0.434 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -141482 sc-eQTL 1.45e-01 -0.113 0.077 0.434 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -190886 sc-eQTL 3.33e-01 0.0495 0.051 0.434 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -241996 sc-eQTL 7.55e-01 0.0109 0.0351 0.434 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -240766 sc-eQTL 3.91e-01 -0.0535 0.0623 0.434 CD14_Mono LOneK1K
ENSG00000079950 STX7 59375 sc-eQTL 4.51e-01 -0.042 0.0556 0.431 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -162192 sc-eQTL 7.77e-02 -0.144 0.0813 0.431 CD16_Mono LOneK1K
ENSG00000112282 MED23 944331 sc-eQTL 1.22e-01 -0.123 0.0793 0.431 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -141482 sc-eQTL 4.81e-01 -0.0573 0.0811 0.431 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -190886 sc-eQTL 2.59e-01 0.0864 0.0763 0.431 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -241996 sc-eQTL 5.58e-01 -0.019 0.0324 0.431 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -240766 sc-eQTL 9.23e-01 0.00761 0.0788 0.431 CD16_Mono LOneK1K
ENSG00000079950 STX7 59375 sc-eQTL 3.88e-02 -0.133 0.0638 0.431 NK_CD56dim LOneK1K
ENSG00000112282 MED23 944331 sc-eQTL 5.69e-01 0.0357 0.0625 0.431 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -190886 sc-eQTL 3.38e-01 0.0782 0.0814 0.431 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -241996 sc-eQTL 7.34e-01 0.0113 0.0333 0.431 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000093134 VNN3 -162192 eQTL 0.0203 0.0337 0.0145 0.0 0.0 0.429
ENSG00000112303 VNN2 -190886 pQTL 4.09e-05 0.103 0.025 0.0 0.0 0.434
ENSG00000112303 VNN2 -190886 eQTL 0.00754 0.0345 0.0129 0.0 0.0 0.429
ENSG00000234484 AL032821.1 -180102 eQTL 0.000279 -0.112 0.0308 0.0 0.0 0.429

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000093134 VNN3 -162192 3.58e-06 3.65e-06 7.57e-07 1.96e-06 9.11e-07 7.84e-07 2.49e-06 9.93e-07 2.76e-06 1.61e-06 3.2e-06 2.28e-06 5.39e-06 1.24e-06 1.03e-06 2.07e-06 1.72e-06 2.03e-06 1.42e-06 9.54e-07 1.96e-06 3.51e-06 3.44e-06 1.9e-06 4.32e-06 1.22e-06 1.77e-06 1.5e-06 3.79e-06 2.94e-06 1.91e-06 5.42e-07 8.14e-07 1.68e-06 1.73e-06 8.52e-07 9.24e-07 4.2e-07 1.39e-06 3.82e-07 3.75e-07 3.83e-06 4.6e-07 1.93e-07 3.69e-07 3.7e-07 6.79e-07 2.26e-07 3.18e-07
ENSG00000234484 AL032821.1 -180102 2.96e-06 2.62e-06 5.59e-07 1.85e-06 7.88e-07 8.08e-07 2.03e-06 8.47e-07 2.25e-06 1.21e-06 2.52e-06 1.66e-06 3.61e-06 1.35e-06 9.23e-07 1.95e-06 1.57e-06 2.2e-06 1.51e-06 1.28e-06 1.39e-06 3.18e-06 2.68e-06 1.46e-06 3.8e-06 1.13e-06 1.47e-06 1.78e-06 2.71e-06 2.23e-06 1.86e-06 4.53e-07 6.64e-07 1.35e-06 1.54e-06 8.93e-07 8.88e-07 4.09e-07 1.34e-06 3.63e-07 2.08e-07 3.32e-06 5.79e-07 1.89e-07 3.44e-07 3.72e-07 9e-07 2.35e-07 1.76e-07