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Genes within 1Mb (chr6:132562610:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 161135 sc-eQTL 9.08e-01 0.0118 0.103 0.707 B L1
ENSG00000079950 STX7 49412 sc-eQTL 2.49e-01 -0.0447 0.0387 0.707 B L1
ENSG00000112282 MED23 934368 sc-eQTL 3.18e-01 -0.0772 0.0771 0.707 B L1
ENSG00000112303 VNN2 -200849 sc-eQTL 7.44e-01 -0.0238 0.0729 0.707 B L1
ENSG00000112306 RPS12 -251959 sc-eQTL 4.07e-01 0.0366 0.044 0.707 B L1
ENSG00000146409 SLC18B1 -250729 sc-eQTL 9.18e-01 -0.00957 0.0927 0.707 B L1
ENSG00000228495 LINC01013 430722 sc-eQTL 1.76e-01 0.0823 0.0606 0.707 B L1
ENSG00000079950 STX7 49412 sc-eQTL 3.32e-03 -0.225 0.0757 0.707 CD4T L1
ENSG00000112282 MED23 934368 sc-eQTL 7.49e-01 -0.0197 0.0613 0.707 CD4T L1
ENSG00000112303 VNN2 -200849 sc-eQTL 5.48e-01 0.0403 0.0669 0.707 CD4T L1
ENSG00000112306 RPS12 -251959 sc-eQTL 8.74e-01 0.00724 0.0455 0.707 CD4T L1
ENSG00000146409 SLC18B1 -250729 sc-eQTL 8.85e-01 0.0133 0.092 0.707 CD4T L1
ENSG00000079950 STX7 49412 sc-eQTL 6.40e-02 -0.141 0.0757 0.707 CD8T L1
ENSG00000112282 MED23 934368 sc-eQTL 7.20e-01 0.0269 0.0752 0.707 CD8T L1
ENSG00000112303 VNN2 -200849 sc-eQTL 7.21e-03 -0.238 0.0876 0.707 CD8T L1
ENSG00000112306 RPS12 -251959 sc-eQTL 5.43e-01 0.0185 0.0304 0.707 CD8T L1
ENSG00000146409 SLC18B1 -250729 sc-eQTL 5.83e-01 0.0506 0.092 0.707 CD8T L1
ENSG00000079950 STX7 49412 sc-eQTL 8.07e-01 -0.0165 0.0674 0.709 DC L1
ENSG00000093134 VNN3 -172155 sc-eQTL 7.55e-01 -0.0261 0.0835 0.709 DC L1
ENSG00000112282 MED23 934368 sc-eQTL 1.46e-01 -0.142 0.0975 0.709 DC L1
ENSG00000112299 VNN1 -151445 sc-eQTL 4.91e-01 -0.0622 0.0901 0.709 DC L1
ENSG00000112303 VNN2 -200849 sc-eQTL 3.52e-01 -0.0899 0.0963 0.709 DC L1
ENSG00000112306 RPS12 -251959 sc-eQTL 9.92e-01 -0.000516 0.0541 0.709 DC L1
ENSG00000146409 SLC18B1 -250729 sc-eQTL 4.01e-01 -0.072 0.0855 0.709 DC L1
ENSG00000286438 AL591115.1 -540518 sc-eQTL 7.50e-03 0.207 0.0765 0.709 DC L1
ENSG00000079950 STX7 49412 sc-eQTL 6.37e-01 0.0241 0.051 0.707 Mono L1
ENSG00000093134 VNN3 -172155 sc-eQTL 7.82e-01 0.0243 0.0875 0.707 Mono L1
ENSG00000112282 MED23 934368 sc-eQTL 1.16e-01 -0.13 0.0826 0.707 Mono L1
ENSG00000112299 VNN1 -151445 sc-eQTL 7.44e-03 -0.25 0.0926 0.707 Mono L1
ENSG00000112303 VNN2 -200849 sc-eQTL 4.73e-02 -0.131 0.0658 0.707 Mono L1
ENSG00000112306 RPS12 -251959 sc-eQTL 1.14e-01 -0.0629 0.0396 0.707 Mono L1
ENSG00000146409 SLC18B1 -250729 sc-eQTL 3.87e-01 -0.0682 0.0786 0.707 Mono L1
ENSG00000079950 STX7 49412 sc-eQTL 2.08e-02 -0.179 0.0767 0.706 NK L1
ENSG00000112282 MED23 934368 sc-eQTL 2.26e-01 0.086 0.0708 0.706 NK L1
ENSG00000112303 VNN2 -200849 sc-eQTL 6.24e-01 -0.0475 0.0966 0.706 NK L1
ENSG00000112306 RPS12 -251959 sc-eQTL 5.40e-01 0.0245 0.04 0.706 NK L1
ENSG00000079950 STX7 49412 sc-eQTL 6.83e-01 0.0312 0.0764 0.707 Other_T L1
ENSG00000112282 MED23 934368 sc-eQTL 3.95e-01 -0.0813 0.0953 0.707 Other_T L1
ENSG00000112303 VNN2 -200849 sc-eQTL 8.29e-01 -0.0199 0.0925 0.707 Other_T L1
ENSG00000112306 RPS12 -251959 sc-eQTL 9.66e-01 -0.00155 0.0367 0.707 Other_T L1
ENSG00000146409 SLC18B1 -250729 sc-eQTL 8.73e-01 -0.0161 0.1 0.707 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 161135 sc-eQTL 6.81e-01 0.0442 0.107 0.722 B_Activated L2
ENSG00000079950 STX7 49412 sc-eQTL 5.49e-01 0.0604 0.101 0.722 B_Activated L2
ENSG00000112282 MED23 934368 sc-eQTL 1.34e-01 0.167 0.111 0.722 B_Activated L2
ENSG00000112303 VNN2 -200849 sc-eQTL 7.22e-01 0.0383 0.107 0.722 B_Activated L2
ENSG00000112306 RPS12 -251959 sc-eQTL 6.89e-01 0.023 0.0574 0.722 B_Activated L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 9.43e-01 -0.00726 0.101 0.722 B_Activated L2
ENSG00000228495 LINC01013 430722 sc-eQTL 8.13e-01 -0.0228 0.096 0.722 B_Activated L2
ENSG00000079931 MOXD1 161135 sc-eQTL 6.63e-01 0.0411 0.0941 0.708 B_Intermediate L2
ENSG00000079950 STX7 49412 sc-eQTL 8.08e-01 -0.015 0.0616 0.708 B_Intermediate L2
ENSG00000112282 MED23 934368 sc-eQTL 3.23e-01 -0.0926 0.0935 0.708 B_Intermediate L2
ENSG00000112303 VNN2 -200849 sc-eQTL 8.12e-01 0.0221 0.0928 0.708 B_Intermediate L2
ENSG00000112306 RPS12 -251959 sc-eQTL 2.30e-01 0.0681 0.0566 0.708 B_Intermediate L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 1.30e-01 -0.155 0.102 0.708 B_Intermediate L2
ENSG00000228495 LINC01013 430722 sc-eQTL 2.65e-01 0.097 0.0867 0.708 B_Intermediate L2
ENSG00000079931 MOXD1 161135 sc-eQTL 6.33e-01 -0.0452 0.0946 0.707 B_Memory L2
ENSG00000079950 STX7 49412 sc-eQTL 1.09e-01 -0.119 0.0738 0.707 B_Memory L2
ENSG00000112282 MED23 934368 sc-eQTL 4.98e-02 0.187 0.0948 0.707 B_Memory L2
ENSG00000112303 VNN2 -200849 sc-eQTL 1.79e-01 -0.131 0.0967 0.707 B_Memory L2
ENSG00000112306 RPS12 -251959 sc-eQTL 4.18e-01 0.0379 0.0467 0.707 B_Memory L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 2.61e-01 0.11 0.0974 0.707 B_Memory L2
ENSG00000228495 LINC01013 430722 sc-eQTL 2.33e-01 0.108 0.0907 0.707 B_Memory L2
ENSG00000079931 MOXD1 161135 sc-eQTL 5.98e-01 0.0567 0.107 0.707 B_Naive1 L2
ENSG00000079950 STX7 49412 sc-eQTL 6.72e-01 -0.0199 0.0469 0.707 B_Naive1 L2
ENSG00000112282 MED23 934368 sc-eQTL 5.51e-01 -0.0501 0.084 0.707 B_Naive1 L2
ENSG00000112303 VNN2 -200849 sc-eQTL 1.28e-01 0.138 0.0907 0.707 B_Naive1 L2
ENSG00000112306 RPS12 -251959 sc-eQTL 5.08e-01 0.0344 0.0519 0.707 B_Naive1 L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 9.65e-01 0.00444 0.1 0.707 B_Naive1 L2
ENSG00000228495 LINC01013 430722 sc-eQTL 6.16e-02 0.124 0.0658 0.707 B_Naive1 L2
ENSG00000079931 MOXD1 161135 sc-eQTL 6.87e-01 0.0411 0.102 0.706 B_Naive2 L2
ENSG00000079950 STX7 49412 sc-eQTL 2.03e-01 -0.0706 0.0553 0.706 B_Naive2 L2
ENSG00000112282 MED23 934368 sc-eQTL 6.97e-03 -0.275 0.101 0.706 B_Naive2 L2
ENSG00000112303 VNN2 -200849 sc-eQTL 3.36e-01 0.0979 0.102 0.706 B_Naive2 L2
ENSG00000112306 RPS12 -251959 sc-eQTL 7.30e-01 0.0186 0.0539 0.706 B_Naive2 L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 4.09e-01 0.0851 0.103 0.706 B_Naive2 L2
ENSG00000228495 LINC01013 430722 sc-eQTL 2.27e-01 0.0862 0.0711 0.706 B_Naive2 L2
ENSG00000079950 STX7 49412 sc-eQTL 7.82e-01 -0.0285 0.103 0.709 CD4_CTL L2
ENSG00000112282 MED23 934368 sc-eQTL 8.92e-01 0.0145 0.107 0.709 CD4_CTL L2
ENSG00000112303 VNN2 -200849 sc-eQTL 6.59e-01 -0.0458 0.104 0.709 CD4_CTL L2
ENSG00000112306 RPS12 -251959 sc-eQTL 1.50e-01 0.0688 0.0476 0.709 CD4_CTL L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 1.07e-02 -0.245 0.0949 0.709 CD4_CTL L2
ENSG00000079950 STX7 49412 sc-eQTL 2.83e-02 -0.18 0.0817 0.707 CD4_Naive L2
ENSG00000112282 MED23 934368 sc-eQTL 8.35e-01 -0.0147 0.0705 0.707 CD4_Naive L2
ENSG00000112303 VNN2 -200849 sc-eQTL 9.54e-01 -0.0044 0.0765 0.707 CD4_Naive L2
ENSG00000112306 RPS12 -251959 sc-eQTL 7.35e-01 0.0168 0.0496 0.707 CD4_Naive L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 3.24e-01 0.0943 0.0953 0.707 CD4_Naive L2
ENSG00000079950 STX7 49412 sc-eQTL 9.54e-04 -0.299 0.0891 0.707 CD4_TCM L2
ENSG00000112282 MED23 934368 sc-eQTL 6.26e-01 0.0375 0.0768 0.707 CD4_TCM L2
ENSG00000112303 VNN2 -200849 sc-eQTL 7.76e-01 0.0257 0.0901 0.707 CD4_TCM L2
ENSG00000112306 RPS12 -251959 sc-eQTL 6.58e-01 0.0207 0.0467 0.707 CD4_TCM L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 3.55e-01 0.1 0.108 0.707 CD4_TCM L2
ENSG00000079950 STX7 49412 sc-eQTL 1.06e-01 -0.169 0.104 0.707 CD4_TEM L2
ENSG00000112282 MED23 934368 sc-eQTL 9.90e-01 -0.00126 0.0964 0.707 CD4_TEM L2
ENSG00000112303 VNN2 -200849 sc-eQTL 7.57e-01 -0.0311 0.1 0.707 CD4_TEM L2
ENSG00000112306 RPS12 -251959 sc-eQTL 3.71e-01 0.0368 0.0411 0.707 CD4_TEM L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 1.06e-01 -0.165 0.102 0.707 CD4_TEM L2
ENSG00000079950 STX7 49412 sc-eQTL 7.15e-02 -0.157 0.0864 0.707 CD8_CTL L2
ENSG00000112282 MED23 934368 sc-eQTL 6.70e-01 -0.0381 0.0892 0.707 CD8_CTL L2
ENSG00000112303 VNN2 -200849 sc-eQTL 6.93e-02 -0.179 0.0982 0.707 CD8_CTL L2
ENSG00000112306 RPS12 -251959 sc-eQTL 3.01e-01 0.0547 0.0528 0.707 CD8_CTL L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 8.26e-01 0.0226 0.103 0.707 CD8_CTL L2
ENSG00000079950 STX7 49412 sc-eQTL 7.85e-01 0.0287 0.105 0.707 CD8_Naive L2
ENSG00000112282 MED23 934368 sc-eQTL 8.14e-01 0.0199 0.0847 0.707 CD8_Naive L2
ENSG00000112303 VNN2 -200849 sc-eQTL 1.31e-01 -0.137 0.0904 0.707 CD8_Naive L2
ENSG00000112306 RPS12 -251959 sc-eQTL 5.29e-01 0.0327 0.052 0.707 CD8_Naive L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 4.14e-01 0.0854 0.104 0.707 CD8_Naive L2
ENSG00000079950 STX7 49412 sc-eQTL 2.73e-01 -0.114 0.104 0.704 CD8_TCM L2
ENSG00000112282 MED23 934368 sc-eQTL 5.40e-01 -0.0639 0.104 0.704 CD8_TCM L2
ENSG00000112303 VNN2 -200849 sc-eQTL 9.92e-01 -0.00103 0.103 0.704 CD8_TCM L2
ENSG00000112306 RPS12 -251959 sc-eQTL 5.67e-01 -0.0288 0.0502 0.704 CD8_TCM L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 2.62e-01 -0.124 0.11 0.704 CD8_TCM L2
ENSG00000079950 STX7 49412 sc-eQTL 7.11e-01 -0.0404 0.109 0.719 CD8_TEM L2
ENSG00000112282 MED23 934368 sc-eQTL 8.33e-01 0.0221 0.105 0.719 CD8_TEM L2
ENSG00000112303 VNN2 -200849 sc-eQTL 6.33e-01 -0.0517 0.108 0.719 CD8_TEM L2
ENSG00000112306 RPS12 -251959 sc-eQTL 2.97e-01 0.0606 0.058 0.719 CD8_TEM L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 3.45e-01 -0.104 0.11 0.719 CD8_TEM L2
ENSG00000079950 STX7 49412 sc-eQTL 3.27e-01 0.0957 0.0975 0.71 MAIT L2
ENSG00000112282 MED23 934368 sc-eQTL 2.06e-01 -0.129 0.102 0.71 MAIT L2
ENSG00000112303 VNN2 -200849 sc-eQTL 3.12e-01 0.1 0.0992 0.71 MAIT L2
ENSG00000112306 RPS12 -251959 sc-eQTL 9.80e-01 0.00125 0.0489 0.71 MAIT L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 3.14e-01 -0.103 0.102 0.71 MAIT L2
ENSG00000079950 STX7 49412 sc-eQTL 1.88e-01 -0.132 0.0999 0.702 NK_CD56bright L2
ENSG00000112282 MED23 934368 sc-eQTL 4.12e-01 0.087 0.106 0.702 NK_CD56bright L2
ENSG00000112303 VNN2 -200849 sc-eQTL 5.72e-01 -0.0575 0.102 0.702 NK_CD56bright L2
ENSG00000112306 RPS12 -251959 sc-eQTL 7.05e-01 0.0215 0.0567 0.702 NK_CD56bright L2
ENSG00000079950 STX7 49412 sc-eQTL 3.22e-01 -0.0823 0.0828 0.705 NK_CD56dim L2
ENSG00000112282 MED23 934368 sc-eQTL 4.68e-01 0.0619 0.0852 0.705 NK_CD56dim L2
ENSG00000112303 VNN2 -200849 sc-eQTL 6.54e-01 0.0466 0.104 0.705 NK_CD56dim L2
ENSG00000112306 RPS12 -251959 sc-eQTL 6.84e-01 0.0168 0.0412 0.705 NK_CD56dim L2
ENSG00000079950 STX7 49412 sc-eQTL 8.92e-01 -0.0137 0.101 0.701 NK_HLA L2
ENSG00000112282 MED23 934368 sc-eQTL 6.14e-01 0.0515 0.102 0.701 NK_HLA L2
ENSG00000112303 VNN2 -200849 sc-eQTL 6.55e-01 -0.0456 0.102 0.701 NK_HLA L2
ENSG00000112306 RPS12 -251959 sc-eQTL 8.64e-02 0.0814 0.0472 0.701 NK_HLA L2
ENSG00000079950 STX7 49412 sc-eQTL 2.83e-04 -0.32 0.0866 0.705 NK_cytokine L2
ENSG00000112282 MED23 934368 sc-eQTL 2.56e-01 0.105 0.0921 0.705 NK_cytokine L2
ENSG00000112303 VNN2 -200849 sc-eQTL 9.59e-02 -0.167 0.0998 0.705 NK_cytokine L2
ENSG00000112306 RPS12 -251959 sc-eQTL 2.82e-01 0.0587 0.0543 0.705 NK_cytokine L2
ENSG00000079931 MOXD1 161135 sc-eQTL 3.45e-01 0.101 0.106 0.681 PB L2
ENSG00000079950 STX7 49412 sc-eQTL 3.42e-01 0.0847 0.0888 0.681 PB L2
ENSG00000112282 MED23 934368 sc-eQTL 7.48e-02 0.215 0.12 0.681 PB L2
ENSG00000112303 VNN2 -200849 sc-eQTL 4.21e-01 -0.0878 0.109 0.681 PB L2
ENSG00000112306 RPS12 -251959 sc-eQTL 1.59e-01 0.0868 0.0613 0.681 PB L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 1.00e+00 -8.54e-06 0.116 0.681 PB L2
ENSG00000228495 LINC01013 430722 sc-eQTL 3.27e-01 0.0748 0.0759 0.681 PB L2
ENSG00000079950 STX7 49412 sc-eQTL 6.28e-01 -0.0442 0.0912 0.702 Pro_T L2
ENSG00000112282 MED23 934368 sc-eQTL 4.25e-01 -0.0819 0.102 0.702 Pro_T L2
ENSG00000112303 VNN2 -200849 sc-eQTL 5.51e-01 -0.0583 0.0977 0.702 Pro_T L2
ENSG00000112306 RPS12 -251959 sc-eQTL 7.57e-01 0.0115 0.037 0.702 Pro_T L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 7.88e-01 -0.0258 0.0958 0.702 Pro_T L2
ENSG00000079950 STX7 49412 sc-eQTL 7.98e-01 -0.0254 0.099 0.707 Treg L2
ENSG00000112282 MED23 934368 sc-eQTL 8.74e-01 0.0161 0.102 0.707 Treg L2
ENSG00000112303 VNN2 -200849 sc-eQTL 9.97e-01 -0.000321 0.0833 0.707 Treg L2
ENSG00000112306 RPS12 -251959 sc-eQTL 6.12e-01 -0.0187 0.0368 0.707 Treg L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 2.80e-01 -0.112 0.104 0.707 Treg L2
ENSG00000079950 STX7 49412 sc-eQTL 1.44e-01 -0.124 0.0843 0.705 cDC L2
ENSG00000093134 VNN3 -172155 sc-eQTL 2.70e-01 0.0929 0.0839 0.705 cDC L2
ENSG00000112282 MED23 934368 sc-eQTL 1.51e-01 -0.157 0.109 0.705 cDC L2
ENSG00000112299 VNN1 -151445 sc-eQTL 8.93e-01 -0.0133 0.099 0.705 cDC L2
ENSG00000112303 VNN2 -200849 sc-eQTL 5.52e-01 -0.0574 0.0964 0.705 cDC L2
ENSG00000112306 RPS12 -251959 sc-eQTL 8.62e-01 0.00829 0.0476 0.705 cDC L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 1.07e-01 -0.152 0.0937 0.705 cDC L2
ENSG00000286438 AL591115.1 -540518 sc-eQTL 6.26e-04 0.254 0.073 0.705 cDC L2
ENSG00000079950 STX7 49412 sc-eQTL 6.32e-01 -0.0315 0.0658 0.707 cMono_IL1B L2
ENSG00000093134 VNN3 -172155 sc-eQTL 2.34e-01 0.111 0.0927 0.707 cMono_IL1B L2
ENSG00000112282 MED23 934368 sc-eQTL 2.80e-01 -0.0993 0.0917 0.707 cMono_IL1B L2
ENSG00000112299 VNN1 -151445 sc-eQTL 2.06e-02 -0.216 0.0926 0.707 cMono_IL1B L2
ENSG00000112303 VNN2 -200849 sc-eQTL 3.67e-02 -0.156 0.0742 0.707 cMono_IL1B L2
ENSG00000112306 RPS12 -251959 sc-eQTL 1.62e-01 -0.0582 0.0415 0.707 cMono_IL1B L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 7.95e-01 -0.021 0.0804 0.707 cMono_IL1B L2
ENSG00000079950 STX7 49412 sc-eQTL 6.42e-01 0.033 0.0708 0.707 cMono_S100A L2
ENSG00000093134 VNN3 -172155 sc-eQTL 5.25e-01 -0.0563 0.0884 0.707 cMono_S100A L2
ENSG00000112282 MED23 934368 sc-eQTL 7.19e-01 -0.0346 0.0961 0.707 cMono_S100A L2
ENSG00000112299 VNN1 -151445 sc-eQTL 4.71e-02 -0.19 0.0952 0.707 cMono_S100A L2
ENSG00000112303 VNN2 -200849 sc-eQTL 2.42e-01 -0.0737 0.0628 0.707 cMono_S100A L2
ENSG00000112306 RPS12 -251959 sc-eQTL 9.15e-01 -0.00486 0.0453 0.707 cMono_S100A L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 8.49e-01 -0.016 0.0839 0.707 cMono_S100A L2
ENSG00000079950 STX7 49412 sc-eQTL 3.54e-01 -0.106 0.114 0.73 gdT L2
ENSG00000112282 MED23 934368 sc-eQTL 4.47e-01 0.0934 0.122 0.73 gdT L2
ENSG00000112303 VNN2 -200849 sc-eQTL 5.18e-01 -0.0819 0.126 0.73 gdT L2
ENSG00000112306 RPS12 -251959 sc-eQTL 2.02e-01 0.0614 0.0479 0.73 gdT L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 4.98e-01 0.0846 0.124 0.73 gdT L2
ENSG00000079950 STX7 49412 sc-eQTL 5.76e-01 -0.0527 0.0941 0.704 intMono L2
ENSG00000093134 VNN3 -172155 sc-eQTL 1.47e-01 0.138 0.0945 0.704 intMono L2
ENSG00000112282 MED23 934368 sc-eQTL 1.44e-01 -0.152 0.104 0.704 intMono L2
ENSG00000112299 VNN1 -151445 sc-eQTL 2.06e-03 -0.286 0.0918 0.704 intMono L2
ENSG00000112303 VNN2 -200849 sc-eQTL 2.17e-02 -0.218 0.0942 0.704 intMono L2
ENSG00000112306 RPS12 -251959 sc-eQTL 9.71e-01 0.00149 0.0416 0.704 intMono L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 8.68e-01 0.0169 0.101 0.704 intMono L2
ENSG00000079950 STX7 49412 sc-eQTL 8.34e-01 0.015 0.0714 0.706 ncMono L2
ENSG00000093134 VNN3 -172155 sc-eQTL 8.02e-01 -0.0252 0.101 0.706 ncMono L2
ENSG00000112282 MED23 934368 sc-eQTL 7.65e-01 -0.0305 0.102 0.706 ncMono L2
ENSG00000112299 VNN1 -151445 sc-eQTL 1.72e-02 -0.237 0.0986 0.706 ncMono L2
ENSG00000112303 VNN2 -200849 sc-eQTL 6.57e-01 -0.0427 0.0961 0.706 ncMono L2
ENSG00000112306 RPS12 -251959 sc-eQTL 2.57e-01 -0.0546 0.0481 0.706 ncMono L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 7.58e-01 -0.0263 0.0851 0.706 ncMono L2
ENSG00000079950 STX7 49412 sc-eQTL 3.51e-01 0.0733 0.0783 0.689 pDC L2
ENSG00000093134 VNN3 -172155 sc-eQTL 7.76e-01 -0.0225 0.079 0.689 pDC L2
ENSG00000112282 MED23 934368 sc-eQTL 8.05e-01 -0.0272 0.11 0.689 pDC L2
ENSG00000112299 VNN1 -151445 sc-eQTL 9.71e-01 -0.0029 0.0804 0.689 pDC L2
ENSG00000112303 VNN2 -200849 sc-eQTL 2.17e-01 -0.118 0.0953 0.689 pDC L2
ENSG00000112306 RPS12 -251959 sc-eQTL 9.76e-01 0.00198 0.066 0.689 pDC L2
ENSG00000146409 SLC18B1 -250729 sc-eQTL 3.34e-01 0.0943 0.0973 0.689 pDC L2
ENSG00000286438 AL591115.1 -540518 sc-eQTL 9.57e-02 0.155 0.0926 0.689 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 161135 sc-eQTL 5.35e-01 -0.0617 0.0993 0.707 B_Memory LOneK1K
ENSG00000079950 STX7 49412 sc-eQTL 2.98e-01 -0.0586 0.0561 0.707 B_Memory LOneK1K
ENSG00000112282 MED23 934368 sc-eQTL 8.60e-01 -0.0152 0.0861 0.707 B_Memory LOneK1K
ENSG00000112303 VNN2 -200849 sc-eQTL 4.55e-01 -0.0666 0.0889 0.707 B_Memory LOneK1K
ENSG00000112306 RPS12 -251959 sc-eQTL 3.94e-01 0.0433 0.0506 0.707 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -250729 sc-eQTL 4.69e-01 -0.0674 0.093 0.707 B_Memory LOneK1K
ENSG00000228495 LINC01013 430722 sc-eQTL 3.53e-01 0.0834 0.0896 0.707 B_Memory LOneK1K
ENSG00000079931 MOXD1 161135 sc-eQTL 5.61e-01 0.0628 0.108 0.707 B_Naive LOneK1K
ENSG00000079950 STX7 49412 sc-eQTL 3.81e-01 -0.0388 0.0442 0.707 B_Naive LOneK1K
ENSG00000112282 MED23 934368 sc-eQTL 9.40e-02 -0.139 0.0826 0.707 B_Naive LOneK1K
ENSG00000112303 VNN2 -200849 sc-eQTL 2.38e-01 0.101 0.0858 0.707 B_Naive LOneK1K
ENSG00000112306 RPS12 -251959 sc-eQTL 5.18e-01 0.0337 0.052 0.707 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -250729 sc-eQTL 7.09e-01 0.0367 0.0982 0.707 B_Naive LOneK1K
ENSG00000228495 LINC01013 430722 sc-eQTL 1.12e-01 0.0991 0.062 0.707 B_Naive LOneK1K
ENSG00000079950 STX7 49412 sc-eQTL 9.61e-01 -0.00266 0.0549 0.707 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -172155 sc-eQTL 6.29e-01 0.0433 0.0894 0.707 CD14_Mono LOneK1K
ENSG00000112282 MED23 934368 sc-eQTL 1.66e-01 -0.119 0.0856 0.707 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -151445 sc-eQTL 9.93e-03 -0.239 0.0919 0.707 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -200849 sc-eQTL 3.43e-02 -0.13 0.061 0.707 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -251959 sc-eQTL 2.91e-01 -0.0447 0.0422 0.707 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -250729 sc-eQTL 6.94e-01 -0.0297 0.0753 0.707 CD14_Mono LOneK1K
ENSG00000079950 STX7 49412 sc-eQTL 7.44e-01 -0.0218 0.0665 0.707 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -172155 sc-eQTL 4.38e-01 0.0759 0.0977 0.707 CD16_Mono LOneK1K
ENSG00000112282 MED23 934368 sc-eQTL 1.21e-01 -0.147 0.0947 0.707 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -151445 sc-eQTL 4.25e-03 -0.275 0.0951 0.707 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -200849 sc-eQTL 2.65e-01 -0.102 0.0912 0.707 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -251959 sc-eQTL 4.94e-01 -0.0265 0.0388 0.707 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -250729 sc-eQTL 5.63e-01 -0.0545 0.0941 0.707 CD16_Mono LOneK1K
ENSG00000079950 STX7 49412 sc-eQTL 1.37e-02 -0.192 0.0772 0.705 NK_CD56dim LOneK1K
ENSG00000112282 MED23 934368 sc-eQTL 1.95e-01 0.0985 0.0758 0.705 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -200849 sc-eQTL 5.35e-01 -0.0616 0.0991 0.705 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -251959 sc-eQTL 4.05e-01 0.0337 0.0404 0.705 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 49412 eQTL 2.44e-07 -0.0899 0.0173 0.0 0.0 0.276
ENSG00000112282 MED23 934368 eQTL 0.0445 -0.0369 0.0183 0.0 0.0 0.276
ENSG00000112303 VNN2 -200849 pQTL 0.011 -0.0709 0.0278 0.0 0.0 0.281
ENSG00000118520 ARG1 989466 eQTL 0.0355 -0.0427 0.0203 0.0 0.0 0.276

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079950 STX7 49412 7.77e-06 9.04e-06 1.36e-06 3.95e-06 2.1e-06 3.9e-06 9.57e-06 1.36e-06 5.94e-06 4.2e-06 8.91e-06 4.15e-06 1.13e-05 3.61e-06 1.87e-06 5.31e-06 3.64e-06 4.84e-06 2.55e-06 2.62e-06 3.83e-06 7.66e-06 6.69e-06 3.08e-06 1.08e-05 2.8e-06 3.93e-06 2.51e-06 7.53e-06 7.87e-06 4.13e-06 7.91e-07 1.05e-06 2.85e-06 2.82e-06 2.07e-06 1.57e-06 1.56e-06 1.57e-06 1.02e-06 1.02e-06 8.29e-06 9.1e-07 1.56e-07 6.87e-07 1.2e-06 9.16e-07 7.07e-07 4.78e-07