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Genes within 1Mb (chr6:132425283:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 23808 sc-eQTL 2.57e-01 -0.1 0.088 0.404 B L1
ENSG00000079950 STX7 -87915 sc-eQTL 4.00e-02 0.0681 0.033 0.404 B L1
ENSG00000112282 MED23 797041 sc-eQTL 1.72e-01 0.0905 0.0661 0.404 B L1
ENSG00000112303 VNN2 -338176 sc-eQTL 7.91e-01 -0.0166 0.0626 0.404 B L1
ENSG00000112306 RPS12 -389286 sc-eQTL 2.11e-01 -0.0473 0.0377 0.404 B L1
ENSG00000146409 SLC18B1 -388056 sc-eQTL 4.01e-01 -0.0669 0.0795 0.404 B L1
ENSG00000228495 LINC01013 293395 sc-eQTL 4.48e-01 -0.0397 0.0522 0.404 B L1
ENSG00000079950 STX7 -87915 sc-eQTL 1.38e-01 0.0949 0.0637 0.404 CD4T L1
ENSG00000112282 MED23 797041 sc-eQTL 6.34e-01 -0.0242 0.0508 0.404 CD4T L1
ENSG00000112303 VNN2 -338176 sc-eQTL 8.49e-01 -0.0106 0.0555 0.404 CD4T L1
ENSG00000112306 RPS12 -389286 sc-eQTL 4.04e-01 -0.0315 0.0376 0.404 CD4T L1
ENSG00000146409 SLC18B1 -388056 sc-eQTL 9.87e-01 -0.00121 0.0763 0.404 CD4T L1
ENSG00000079950 STX7 -87915 sc-eQTL 4.85e-02 0.126 0.0633 0.404 CD8T L1
ENSG00000112282 MED23 797041 sc-eQTL 7.82e-02 0.111 0.0625 0.404 CD8T L1
ENSG00000112303 VNN2 -338176 sc-eQTL 2.40e-01 -0.0876 0.0744 0.404 CD8T L1
ENSG00000112306 RPS12 -389286 sc-eQTL 3.33e-01 -0.0247 0.0254 0.404 CD8T L1
ENSG00000146409 SLC18B1 -388056 sc-eQTL 8.11e-01 -0.0184 0.0771 0.404 CD8T L1
ENSG00000079950 STX7 -87915 sc-eQTL 7.14e-01 -0.0216 0.0589 0.403 DC L1
ENSG00000093134 VNN3 -309482 sc-eQTL 1.20e-02 -0.182 0.0719 0.403 DC L1
ENSG00000112282 MED23 797041 sc-eQTL 8.66e-03 -0.223 0.0843 0.403 DC L1
ENSG00000112299 VNN1 -288772 sc-eQTL 1.17e-01 -0.123 0.0784 0.403 DC L1
ENSG00000112303 VNN2 -338176 sc-eQTL 2.11e-01 -0.105 0.0841 0.403 DC L1
ENSG00000112306 RPS12 -389286 sc-eQTL 7.47e-01 -0.0153 0.0473 0.403 DC L1
ENSG00000146409 SLC18B1 -388056 sc-eQTL 9.17e-01 0.00782 0.0749 0.403 DC L1
ENSG00000286438 AL591115.1 -677845 sc-eQTL 3.49e-01 -0.0639 0.068 0.403 DC L1
ENSG00000079950 STX7 -87915 sc-eQTL 5.67e-01 -0.0258 0.045 0.404 Mono L1
ENSG00000093134 VNN3 -309482 sc-eQTL 2.35e-02 -0.174 0.0763 0.404 Mono L1
ENSG00000112282 MED23 797041 sc-eQTL 1.80e-01 -0.0984 0.0731 0.404 Mono L1
ENSG00000112299 VNN1 -288772 sc-eQTL 3.51e-01 -0.0776 0.083 0.404 Mono L1
ENSG00000112303 VNN2 -338176 sc-eQTL 6.40e-01 -0.0275 0.0586 0.404 Mono L1
ENSG00000112306 RPS12 -389286 sc-eQTL 6.09e-01 -0.018 0.0351 0.404 Mono L1
ENSG00000146409 SLC18B1 -388056 sc-eQTL 3.16e-01 -0.0697 0.0694 0.404 Mono L1
ENSG00000079950 STX7 -87915 sc-eQTL 9.30e-02 0.109 0.0649 0.406 NK L1
ENSG00000112282 MED23 797041 sc-eQTL 7.04e-01 0.0227 0.0597 0.406 NK L1
ENSG00000112303 VNN2 -338176 sc-eQTL 7.29e-01 -0.0282 0.0812 0.406 NK L1
ENSG00000112306 RPS12 -389286 sc-eQTL 4.96e-01 -0.0229 0.0336 0.406 NK L1
ENSG00000079950 STX7 -87915 sc-eQTL 6.54e-01 -0.0291 0.0647 0.404 Other_T L1
ENSG00000112282 MED23 797041 sc-eQTL 4.65e-01 0.0592 0.0808 0.404 Other_T L1
ENSG00000112303 VNN2 -338176 sc-eQTL 4.45e-01 -0.0598 0.0782 0.404 Other_T L1
ENSG00000112306 RPS12 -389286 sc-eQTL 1.02e-01 -0.0507 0.0309 0.404 Other_T L1
ENSG00000146409 SLC18B1 -388056 sc-eQTL 2.03e-01 0.108 0.0847 0.404 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 23808 sc-eQTL 5.99e-02 0.164 0.0868 0.406 B_Activated L2
ENSG00000079950 STX7 -87915 sc-eQTL 5.29e-01 0.0518 0.0822 0.406 B_Activated L2
ENSG00000112282 MED23 797041 sc-eQTL 2.09e-01 -0.114 0.0907 0.406 B_Activated L2
ENSG00000112303 VNN2 -338176 sc-eQTL 1.24e-01 -0.134 0.0869 0.406 B_Activated L2
ENSG00000112306 RPS12 -389286 sc-eQTL 5.67e-01 -0.0269 0.0469 0.406 B_Activated L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 3.68e-01 -0.074 0.082 0.406 B_Activated L2
ENSG00000228495 LINC01013 293395 sc-eQTL 7.10e-02 0.141 0.0776 0.406 B_Activated L2
ENSG00000079931 MOXD1 23808 sc-eQTL 1.63e-01 -0.113 0.0805 0.401 B_Intermediate L2
ENSG00000079950 STX7 -87915 sc-eQTL 2.13e-03 0.161 0.0518 0.401 B_Intermediate L2
ENSG00000112282 MED23 797041 sc-eQTL 1.19e-01 0.125 0.0801 0.401 B_Intermediate L2
ENSG00000112303 VNN2 -338176 sc-eQTL 8.54e-02 0.137 0.0792 0.401 B_Intermediate L2
ENSG00000112306 RPS12 -389286 sc-eQTL 4.61e-01 -0.0361 0.0488 0.401 B_Intermediate L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 5.66e-01 -0.0506 0.0879 0.401 B_Intermediate L2
ENSG00000228495 LINC01013 293395 sc-eQTL 4.87e-01 -0.052 0.0747 0.401 B_Intermediate L2
ENSG00000079931 MOXD1 23808 sc-eQTL 2.29e-01 -0.0984 0.0816 0.405 B_Memory L2
ENSG00000079950 STX7 -87915 sc-eQTL 7.91e-01 0.017 0.0643 0.405 B_Memory L2
ENSG00000112282 MED23 797041 sc-eQTL 5.95e-01 -0.0441 0.0827 0.405 B_Memory L2
ENSG00000112303 VNN2 -338176 sc-eQTL 1.44e-01 -0.123 0.0836 0.405 B_Memory L2
ENSG00000112306 RPS12 -389286 sc-eQTL 3.47e-01 -0.0381 0.0404 0.405 B_Memory L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 8.84e-01 -0.0123 0.0845 0.405 B_Memory L2
ENSG00000228495 LINC01013 293395 sc-eQTL 9.47e-01 -0.00522 0.0788 0.405 B_Memory L2
ENSG00000079931 MOXD1 23808 sc-eQTL 2.44e-02 -0.207 0.0915 0.404 B_Naive1 L2
ENSG00000079950 STX7 -87915 sc-eQTL 1.42e-01 0.0594 0.0403 0.404 B_Naive1 L2
ENSG00000112282 MED23 797041 sc-eQTL 3.90e-01 0.0623 0.0724 0.404 B_Naive1 L2
ENSG00000112303 VNN2 -338176 sc-eQTL 2.91e-01 -0.0829 0.0784 0.404 B_Naive1 L2
ENSG00000112306 RPS12 -389286 sc-eQTL 5.91e-01 -0.0241 0.0447 0.404 B_Naive1 L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 5.52e-01 -0.0515 0.0863 0.404 B_Naive1 L2
ENSG00000228495 LINC01013 293395 sc-eQTL 7.48e-01 -0.0184 0.0572 0.404 B_Naive1 L2
ENSG00000079931 MOXD1 23808 sc-eQTL 2.50e-01 -0.1 0.087 0.406 B_Naive2 L2
ENSG00000079950 STX7 -87915 sc-eQTL 4.82e-01 0.0334 0.0475 0.406 B_Naive2 L2
ENSG00000112282 MED23 797041 sc-eQTL 5.25e-01 0.0559 0.0877 0.406 B_Naive2 L2
ENSG00000112303 VNN2 -338176 sc-eQTL 1.90e-01 0.114 0.0869 0.406 B_Naive2 L2
ENSG00000112306 RPS12 -389286 sc-eQTL 4.03e-01 -0.0387 0.0461 0.406 B_Naive2 L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 1.89e-01 -0.116 0.0878 0.406 B_Naive2 L2
ENSG00000228495 LINC01013 293395 sc-eQTL 5.48e-01 -0.0368 0.0611 0.406 B_Naive2 L2
ENSG00000079950 STX7 -87915 sc-eQTL 8.76e-02 0.148 0.0859 0.4 CD4_CTL L2
ENSG00000112282 MED23 797041 sc-eQTL 8.04e-01 -0.0223 0.09 0.4 CD4_CTL L2
ENSG00000112303 VNN2 -338176 sc-eQTL 8.14e-01 -0.0206 0.0873 0.4 CD4_CTL L2
ENSG00000112306 RPS12 -389286 sc-eQTL 7.67e-02 -0.0712 0.04 0.4 CD4_CTL L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 8.63e-01 -0.0141 0.0814 0.4 CD4_CTL L2
ENSG00000079950 STX7 -87915 sc-eQTL 5.21e-01 0.0441 0.0686 0.404 CD4_Naive L2
ENSG00000112282 MED23 797041 sc-eQTL 8.12e-01 -0.014 0.0586 0.404 CD4_Naive L2
ENSG00000112303 VNN2 -338176 sc-eQTL 9.63e-01 -0.00298 0.0636 0.404 CD4_Naive L2
ENSG00000112306 RPS12 -389286 sc-eQTL 4.89e-01 -0.0285 0.0412 0.404 CD4_Naive L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 3.94e-01 0.0677 0.0793 0.404 CD4_Naive L2
ENSG00000079950 STX7 -87915 sc-eQTL 8.88e-02 0.131 0.0764 0.404 CD4_TCM L2
ENSG00000112282 MED23 797041 sc-eQTL 8.30e-01 -0.0139 0.0647 0.404 CD4_TCM L2
ENSG00000112303 VNN2 -338176 sc-eQTL 7.40e-01 0.0252 0.0758 0.404 CD4_TCM L2
ENSG00000112306 RPS12 -389286 sc-eQTL 5.62e-01 -0.0228 0.0393 0.404 CD4_TCM L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 8.98e-02 -0.154 0.0905 0.404 CD4_TCM L2
ENSG00000079950 STX7 -87915 sc-eQTL 2.40e-03 0.266 0.0866 0.404 CD4_TEM L2
ENSG00000112282 MED23 797041 sc-eQTL 9.67e-01 -0.00339 0.0815 0.404 CD4_TEM L2
ENSG00000112303 VNN2 -338176 sc-eQTL 1.10e-01 -0.136 0.0844 0.404 CD4_TEM L2
ENSG00000112306 RPS12 -389286 sc-eQTL 8.90e-02 -0.0591 0.0346 0.404 CD4_TEM L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 2.73e-01 0.095 0.0863 0.404 CD4_TEM L2
ENSG00000079950 STX7 -87915 sc-eQTL 1.34e-01 0.109 0.0727 0.404 CD8_CTL L2
ENSG00000112282 MED23 797041 sc-eQTL 1.94e-01 0.0972 0.0746 0.404 CD8_CTL L2
ENSG00000112303 VNN2 -338176 sc-eQTL 7.41e-01 -0.0274 0.083 0.404 CD8_CTL L2
ENSG00000112306 RPS12 -389286 sc-eQTL 4.88e-02 -0.0873 0.044 0.404 CD8_CTL L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 7.55e-01 0.0268 0.0861 0.404 CD8_CTL L2
ENSG00000079950 STX7 -87915 sc-eQTL 1.51e-02 0.218 0.0888 0.404 CD8_Naive L2
ENSG00000112282 MED23 797041 sc-eQTL 5.43e-01 0.0441 0.0723 0.404 CD8_Naive L2
ENSG00000112303 VNN2 -338176 sc-eQTL 6.31e-01 -0.0374 0.0776 0.404 CD8_Naive L2
ENSG00000112306 RPS12 -389286 sc-eQTL 3.28e-01 -0.0435 0.0444 0.404 CD8_Naive L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 4.69e-01 -0.0647 0.0891 0.404 CD8_Naive L2
ENSG00000079950 STX7 -87915 sc-eQTL 2.87e-01 0.0926 0.0868 0.417 CD8_TCM L2
ENSG00000112282 MED23 797041 sc-eQTL 8.94e-01 -0.0117 0.0874 0.417 CD8_TCM L2
ENSG00000112303 VNN2 -338176 sc-eQTL 5.50e-02 -0.165 0.0856 0.417 CD8_TCM L2
ENSG00000112306 RPS12 -389286 sc-eQTL 7.23e-02 -0.0755 0.0418 0.417 CD8_TCM L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 8.84e-01 -0.0135 0.0923 0.417 CD8_TCM L2
ENSG00000079950 STX7 -87915 sc-eQTL 9.80e-01 -0.0023 0.091 0.402 CD8_TEM L2
ENSG00000112282 MED23 797041 sc-eQTL 9.12e-01 0.00968 0.0876 0.402 CD8_TEM L2
ENSG00000112303 VNN2 -338176 sc-eQTL 8.27e-01 -0.0197 0.0905 0.402 CD8_TEM L2
ENSG00000112306 RPS12 -389286 sc-eQTL 1.44e-01 -0.071 0.0484 0.402 CD8_TEM L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 9.40e-01 -0.00689 0.092 0.402 CD8_TEM L2
ENSG00000079950 STX7 -87915 sc-eQTL 7.81e-01 0.0228 0.082 0.407 MAIT L2
ENSG00000112282 MED23 797041 sc-eQTL 1.37e-01 0.127 0.0854 0.407 MAIT L2
ENSG00000112303 VNN2 -338176 sc-eQTL 9.53e-01 0.0049 0.0835 0.407 MAIT L2
ENSG00000112306 RPS12 -389286 sc-eQTL 3.42e-02 -0.0866 0.0406 0.407 MAIT L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 9.01e-01 0.0108 0.0861 0.407 MAIT L2
ENSG00000079950 STX7 -87915 sc-eQTL 5.25e-01 -0.0563 0.0884 0.409 NK_CD56bright L2
ENSG00000112282 MED23 797041 sc-eQTL 3.58e-01 0.086 0.0934 0.409 NK_CD56bright L2
ENSG00000112303 VNN2 -338176 sc-eQTL 6.95e-01 -0.0353 0.0898 0.409 NK_CD56bright L2
ENSG00000112306 RPS12 -389286 sc-eQTL 6.67e-01 -0.0216 0.05 0.409 NK_CD56bright L2
ENSG00000079950 STX7 -87915 sc-eQTL 6.04e-02 0.129 0.0685 0.405 NK_CD56dim L2
ENSG00000112282 MED23 797041 sc-eQTL 4.14e-01 -0.058 0.0709 0.405 NK_CD56dim L2
ENSG00000112303 VNN2 -338176 sc-eQTL 8.16e-01 -0.0201 0.0864 0.405 NK_CD56dim L2
ENSG00000112306 RPS12 -389286 sc-eQTL 2.02e-01 -0.0437 0.0341 0.405 NK_CD56dim L2
ENSG00000079950 STX7 -87915 sc-eQTL 4.10e-01 0.0708 0.0858 0.418 NK_HLA L2
ENSG00000112282 MED23 797041 sc-eQTL 4.05e-01 -0.0724 0.0867 0.418 NK_HLA L2
ENSG00000112303 VNN2 -338176 sc-eQTL 1.20e-01 0.135 0.0865 0.418 NK_HLA L2
ENSG00000112306 RPS12 -389286 sc-eQTL 8.07e-01 0.00988 0.0405 0.418 NK_HLA L2
ENSG00000079950 STX7 -87915 sc-eQTL 9.20e-01 -0.00774 0.0766 0.405 NK_cytokine L2
ENSG00000112282 MED23 797041 sc-eQTL 8.29e-01 0.0171 0.0792 0.405 NK_cytokine L2
ENSG00000112303 VNN2 -338176 sc-eQTL 5.48e-01 -0.0517 0.086 0.405 NK_cytokine L2
ENSG00000112306 RPS12 -389286 sc-eQTL 3.71e-01 -0.0418 0.0466 0.405 NK_cytokine L2
ENSG00000079931 MOXD1 23808 sc-eQTL 4.17e-03 0.263 0.0899 0.407 PB L2
ENSG00000079950 STX7 -87915 sc-eQTL 8.06e-01 0.0191 0.0779 0.407 PB L2
ENSG00000112282 MED23 797041 sc-eQTL 8.11e-01 0.0253 0.106 0.407 PB L2
ENSG00000112303 VNN2 -338176 sc-eQTL 3.43e-01 -0.0902 0.0948 0.407 PB L2
ENSG00000112306 RPS12 -389286 sc-eQTL 4.61e-01 -0.0399 0.0539 0.407 PB L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 5.09e-01 0.0669 0.101 0.407 PB L2
ENSG00000228495 LINC01013 293395 sc-eQTL 9.28e-01 -0.00602 0.0666 0.407 PB L2
ENSG00000079950 STX7 -87915 sc-eQTL 9.66e-01 0.00345 0.0801 0.402 Pro_T L2
ENSG00000112282 MED23 797041 sc-eQTL 2.13e-01 0.112 0.0898 0.402 Pro_T L2
ENSG00000112303 VNN2 -338176 sc-eQTL 5.43e-01 0.0523 0.0859 0.402 Pro_T L2
ENSG00000112306 RPS12 -389286 sc-eQTL 4.97e-01 -0.0221 0.0325 0.402 Pro_T L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 2.83e-01 0.0902 0.0839 0.402 Pro_T L2
ENSG00000079950 STX7 -87915 sc-eQTL 3.86e-01 0.0742 0.0853 0.404 Treg L2
ENSG00000112282 MED23 797041 sc-eQTL 4.10e-01 -0.0723 0.0877 0.404 Treg L2
ENSG00000112303 VNN2 -338176 sc-eQTL 3.52e-01 0.0669 0.0718 0.404 Treg L2
ENSG00000112306 RPS12 -389286 sc-eQTL 2.81e-01 -0.0343 0.0317 0.404 Treg L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 6.61e-01 -0.0395 0.0898 0.404 Treg L2
ENSG00000079950 STX7 -87915 sc-eQTL 3.82e-01 -0.0642 0.0733 0.4 cDC L2
ENSG00000093134 VNN3 -309482 sc-eQTL 9.52e-03 -0.188 0.0716 0.4 cDC L2
ENSG00000112282 MED23 797041 sc-eQTL 1.15e-02 -0.238 0.0932 0.4 cDC L2
ENSG00000112299 VNN1 -288772 sc-eQTL 6.40e-01 -0.0402 0.0857 0.4 cDC L2
ENSG00000112303 VNN2 -338176 sc-eQTL 3.02e-01 -0.0862 0.0833 0.4 cDC L2
ENSG00000112306 RPS12 -389286 sc-eQTL 1.67e-01 -0.057 0.041 0.4 cDC L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 7.65e-01 0.0244 0.0817 0.4 cDC L2
ENSG00000286438 AL591115.1 -677845 sc-eQTL 1.66e-01 -0.0904 0.065 0.4 cDC L2
ENSG00000079950 STX7 -87915 sc-eQTL 8.37e-01 -0.0115 0.0559 0.404 cMono_IL1B L2
ENSG00000093134 VNN3 -309482 sc-eQTL 2.55e-02 -0.176 0.0781 0.404 cMono_IL1B L2
ENSG00000112282 MED23 797041 sc-eQTL 1.78e-02 -0.184 0.077 0.404 cMono_IL1B L2
ENSG00000112299 VNN1 -288772 sc-eQTL 9.50e-02 -0.133 0.0792 0.404 cMono_IL1B L2
ENSG00000112303 VNN2 -338176 sc-eQTL 2.27e-01 -0.077 0.0635 0.404 cMono_IL1B L2
ENSG00000112306 RPS12 -389286 sc-eQTL 4.00e-01 -0.0298 0.0353 0.404 cMono_IL1B L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 1.66e-01 -0.0944 0.068 0.404 cMono_IL1B L2
ENSG00000079950 STX7 -87915 sc-eQTL 5.77e-01 -0.0349 0.0625 0.404 cMono_S100A L2
ENSG00000093134 VNN3 -309482 sc-eQTL 2.21e-02 -0.178 0.0772 0.404 cMono_S100A L2
ENSG00000112282 MED23 797041 sc-eQTL 1.96e-03 0.26 0.0829 0.404 cMono_S100A L2
ENSG00000112299 VNN1 -288772 sc-eQTL 2.41e-01 -0.0993 0.0846 0.404 cMono_S100A L2
ENSG00000112303 VNN2 -338176 sc-eQTL 2.09e-01 -0.0697 0.0554 0.404 cMono_S100A L2
ENSG00000112306 RPS12 -389286 sc-eQTL 8.17e-01 -0.00929 0.04 0.404 cMono_S100A L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 4.54e-01 -0.0555 0.074 0.404 cMono_S100A L2
ENSG00000079950 STX7 -87915 sc-eQTL 3.25e-01 -0.101 0.102 0.412 gdT L2
ENSG00000112282 MED23 797041 sc-eQTL 2.88e-01 -0.117 0.109 0.412 gdT L2
ENSG00000112303 VNN2 -338176 sc-eQTL 9.84e-01 -0.00221 0.113 0.412 gdT L2
ENSG00000112306 RPS12 -389286 sc-eQTL 3.61e-01 -0.0395 0.043 0.412 gdT L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 2.64e-02 0.246 0.11 0.412 gdT L2
ENSG00000079950 STX7 -87915 sc-eQTL 6.74e-01 0.0346 0.0822 0.402 intMono L2
ENSG00000093134 VNN3 -309482 sc-eQTL 7.81e-01 -0.0231 0.083 0.402 intMono L2
ENSG00000112282 MED23 797041 sc-eQTL 2.46e-01 -0.106 0.0909 0.402 intMono L2
ENSG00000112299 VNN1 -288772 sc-eQTL 3.29e-01 -0.0802 0.0819 0.402 intMono L2
ENSG00000112303 VNN2 -338176 sc-eQTL 1.91e-01 -0.109 0.083 0.402 intMono L2
ENSG00000112306 RPS12 -389286 sc-eQTL 8.47e-01 -0.00703 0.0363 0.402 intMono L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 9.70e-01 0.00332 0.0883 0.402 intMono L2
ENSG00000079950 STX7 -87915 sc-eQTL 2.28e-01 -0.0733 0.0606 0.407 ncMono L2
ENSG00000093134 VNN3 -309482 sc-eQTL 5.03e-02 -0.167 0.0851 0.407 ncMono L2
ENSG00000112282 MED23 797041 sc-eQTL 6.90e-01 -0.0347 0.087 0.407 ncMono L2
ENSG00000112299 VNN1 -288772 sc-eQTL 7.11e-01 -0.0316 0.0852 0.407 ncMono L2
ENSG00000112303 VNN2 -338176 sc-eQTL 4.45e-01 -0.0627 0.0818 0.407 ncMono L2
ENSG00000112306 RPS12 -389286 sc-eQTL 2.33e-01 -0.049 0.041 0.407 ncMono L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 8.81e-01 0.0109 0.0726 0.407 ncMono L2
ENSG00000079950 STX7 -87915 sc-eQTL 4.85e-01 -0.0495 0.0707 0.39 pDC L2
ENSG00000093134 VNN3 -309482 sc-eQTL 6.45e-02 -0.131 0.0705 0.39 pDC L2
ENSG00000112282 MED23 797041 sc-eQTL 5.08e-01 -0.0658 0.0993 0.39 pDC L2
ENSG00000112299 VNN1 -288772 sc-eQTL 4.61e-02 -0.144 0.0716 0.39 pDC L2
ENSG00000112303 VNN2 -338176 sc-eQTL 6.13e-01 -0.0437 0.0863 0.39 pDC L2
ENSG00000112306 RPS12 -389286 sc-eQTL 2.47e-01 -0.0689 0.0592 0.39 pDC L2
ENSG00000146409 SLC18B1 -388056 sc-eQTL 8.59e-01 -0.0157 0.0881 0.39 pDC L2
ENSG00000286438 AL591115.1 -677845 sc-eQTL 6.84e-01 0.0343 0.0842 0.39 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 23808 sc-eQTL 6.93e-01 -0.0342 0.0866 0.404 B_Memory LOneK1K
ENSG00000079950 STX7 -87915 sc-eQTL 1.88e-02 0.115 0.0484 0.404 B_Memory LOneK1K
ENSG00000112282 MED23 797041 sc-eQTL 6.54e-01 0.0336 0.075 0.404 B_Memory LOneK1K
ENSG00000112303 VNN2 -338176 sc-eQTL 7.06e-01 -0.0293 0.0776 0.404 B_Memory LOneK1K
ENSG00000112306 RPS12 -389286 sc-eQTL 1.68e-01 -0.0608 0.044 0.404 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -388056 sc-eQTL 5.92e-01 -0.0435 0.0811 0.404 B_Memory LOneK1K
ENSG00000228495 LINC01013 293395 sc-eQTL 9.98e-01 0.000222 0.0783 0.404 B_Memory LOneK1K
ENSG00000079931 MOXD1 23808 sc-eQTL 4.60e-02 -0.183 0.0914 0.404 B_Naive LOneK1K
ENSG00000079950 STX7 -87915 sc-eQTL 1.53e-01 0.0541 0.0377 0.404 B_Naive LOneK1K
ENSG00000112282 MED23 797041 sc-eQTL 2.02e-01 0.0907 0.0708 0.404 B_Naive LOneK1K
ENSG00000112303 VNN2 -338176 sc-eQTL 7.97e-01 -0.0189 0.0735 0.404 B_Naive LOneK1K
ENSG00000112306 RPS12 -389286 sc-eQTL 5.52e-01 -0.0264 0.0444 0.404 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -388056 sc-eQTL 2.33e-01 -0.1 0.0836 0.404 B_Naive LOneK1K
ENSG00000228495 LINC01013 293395 sc-eQTL 7.63e-01 -0.0161 0.0533 0.404 B_Naive LOneK1K
ENSG00000079950 STX7 -87915 sc-eQTL 7.05e-01 -0.0182 0.048 0.404 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -309482 sc-eQTL 2.97e-02 -0.169 0.0774 0.404 CD14_Mono LOneK1K
ENSG00000112282 MED23 797041 sc-eQTL 5.90e-01 -0.0405 0.0752 0.404 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -288772 sc-eQTL 2.34e-01 -0.0971 0.0813 0.404 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -338176 sc-eQTL 5.44e-01 -0.0328 0.0539 0.404 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -389286 sc-eQTL 9.37e-01 -0.0029 0.037 0.404 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -388056 sc-eQTL 2.81e-01 -0.0709 0.0657 0.404 CD14_Mono LOneK1K
ENSG00000079950 STX7 -87915 sc-eQTL 9.09e-01 -0.0067 0.0586 0.403 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -309482 sc-eQTL 1.06e-01 -0.139 0.0856 0.403 CD16_Mono LOneK1K
ENSG00000112282 MED23 797041 sc-eQTL 5.31e-02 -0.162 0.0832 0.403 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -288772 sc-eQTL 4.28e-01 -0.0677 0.0853 0.403 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -338176 sc-eQTL 3.33e-01 -0.0779 0.0803 0.403 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -389286 sc-eQTL 3.20e-01 -0.034 0.0341 0.403 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -388056 sc-eQTL 5.49e-01 0.0497 0.0829 0.403 CD16_Mono LOneK1K
ENSG00000079950 STX7 -87915 sc-eQTL 4.41e-02 0.132 0.0651 0.405 NK_CD56dim LOneK1K
ENSG00000112282 MED23 797041 sc-eQTL 8.28e-01 -0.0139 0.0638 0.405 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -338176 sc-eQTL 8.30e-01 -0.0179 0.0832 0.405 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -389286 sc-eQTL 4.59e-01 -0.0252 0.0339 0.405 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079931 MOXD1 23808 eQTL 2.41e-06 0.138 0.0291 0.0 0.0 0.406
ENSG00000112299 VNN1 -288772 pQTL 0.00129 -0.112 0.0346 0.0 0.0 0.408
ENSG00000112299 VNN1 -288772 eQTL 0.000309 -0.0764 0.0211 0.0 0.0 0.406

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079931 MOXD1 23808 2.31e-05 3.46e-05 3.02e-06 1.28e-05 2.32e-06 7.78e-06 2.48e-05 2.18e-06 1.65e-05 6.78e-06 2.23e-05 6.86e-06 3.48e-05 7.58e-06 5.1e-06 1.01e-05 1.07e-05 1.32e-05 4.21e-06 3.64e-06 7.08e-06 2.01e-05 1.84e-05 4.21e-06 2.96e-05 5.11e-06 7.98e-06 5.53e-06 2.03e-05 1.85e-05 1.18e-05 9.95e-07 1.12e-06 3.72e-06 7.8e-06 2.83e-06 1.71e-06 1.93e-06 2.68e-06 1.1e-06 7.37e-07 4.06e-05 2.39e-06 1.66e-07 9.19e-07 2.36e-06 1.75e-06 7.19e-07 4.52e-07
ENSG00000112299 VNN1 -288772 2.66e-06 5.07e-06 3.08e-07 2.01e-06 4.27e-07 8.22e-07 1.33e-06 4.1e-07 1.77e-06 5.63e-07 1.76e-06 9.12e-07 3.69e-06 1.4e-06 9.13e-07 9.72e-07 1.24e-06 1.17e-06 7.85e-07 5.73e-07 6.67e-07 2.91e-06 1.56e-06 5.57e-07 3.07e-06 7.53e-07 1.02e-06 7.27e-07 1.66e-06 1.66e-06 1.55e-06 4.4e-08 9.26e-08 6.78e-07 1.02e-06 6.79e-07 6.91e-07 1.15e-07 5.07e-07 2.66e-07 4.84e-08 5.03e-06 4.37e-07 4.11e-08 2.47e-07 3.22e-07 1.62e-07 8.96e-08 9.32e-08
ENSG00000112303 \N -338176 1.58e-06 4.35e-06 2.2e-07 1.54e-06 3.47e-07 6.06e-07 1.32e-06 3.26e-07 1.66e-06 3.76e-07 2.01e-06 6.36e-07 3.04e-06 9.31e-07 5.01e-07 8.35e-07 1.13e-06 7.83e-07 5.54e-07 6.25e-07 7.49e-07 1.96e-06 1.04e-06 5.79e-07 2.35e-06 4.17e-07 9.15e-07 4.96e-07 1.61e-06 1.26e-06 7.52e-07 6.42e-08 4.35e-08 4.51e-07 8.31e-07 5.06e-07 4.77e-07 1.11e-07 3.76e-07 4.07e-08 6.14e-08 4.08e-06 3.59e-07 1.26e-08 1.81e-07 1.48e-07 1.29e-07 3.79e-08 5.95e-08
ENSG00000112306 \N -389286 1.3e-06 2.88e-06 2.57e-07 1.23e-06 2.46e-07 5.88e-07 1.55e-06 2.74e-07 1.41e-06 3.17e-07 1.48e-06 5.68e-07 2.63e-06 3.9e-07 4.26e-07 5.87e-07 9.34e-07 5.47e-07 8.34e-07 3.06e-07 4.44e-07 1.82e-06 9.22e-07 3.53e-07 2.19e-06 3.02e-07 6.81e-07 3.24e-07 1.25e-06 1.27e-06 7.64e-07 6.78e-08 5.53e-08 2.17e-07 5.6e-07 4.77e-07 3.1e-07 7.51e-08 1.73e-07 1.6e-08 5.39e-08 2.78e-06 1.22e-07 1.11e-08 1.89e-07 1.11e-07 8.01e-08 1.17e-08 5.54e-08