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Genes within 1Mb (chr6:132226235:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 -175240 sc-eQTL 5.22e-01 -0.0595 0.0928 0.613 B L1
ENSG00000079950 STX7 -286963 sc-eQTL 2.58e-01 0.0396 0.0349 0.613 B L1
ENSG00000112282 MED23 597993 sc-eQTL 6.31e-01 -0.0336 0.0698 0.613 B L1
ENSG00000112303 VNN2 -537224 sc-eQTL 4.12e-01 0.0541 0.0657 0.613 B L1
ENSG00000112306 RPS12 -588334 sc-eQTL 9.10e-02 -0.0671 0.0395 0.613 B L1
ENSG00000146409 SLC18B1 -587104 sc-eQTL 8.36e-01 0.0174 0.0838 0.613 B L1
ENSG00000228495 LINC01013 94347 sc-eQTL 3.48e-01 -0.0516 0.0549 0.613 B L1
ENSG00000079950 STX7 -286963 sc-eQTL 6.81e-01 -0.0269 0.0654 0.613 CD4T L1
ENSG00000112282 MED23 597993 sc-eQTL 7.88e-01 -0.014 0.0519 0.613 CD4T L1
ENSG00000112303 VNN2 -537224 sc-eQTL 9.69e-01 0.00222 0.0566 0.613 CD4T L1
ENSG00000112306 RPS12 -588334 sc-eQTL 1.28e-01 -0.0585 0.0383 0.613 CD4T L1
ENSG00000146409 SLC18B1 -587104 sc-eQTL 6.89e-03 0.209 0.0765 0.613 CD4T L1
ENSG00000079950 STX7 -286963 sc-eQTL 9.99e-01 8.4e-05 0.0647 0.613 CD8T L1
ENSG00000112282 MED23 597993 sc-eQTL 6.52e-01 0.0288 0.0637 0.613 CD8T L1
ENSG00000112303 VNN2 -537224 sc-eQTL 5.13e-02 0.147 0.0749 0.613 CD8T L1
ENSG00000112306 RPS12 -588334 sc-eQTL 3.90e-01 -0.0222 0.0258 0.613 CD8T L1
ENSG00000146409 SLC18B1 -587104 sc-eQTL 2.40e-01 0.0917 0.0778 0.613 CD8T L1
ENSG00000079950 STX7 -286963 sc-eQTL 2.00e-01 0.0768 0.0597 0.613 DC L1
ENSG00000093134 VNN3 -508530 sc-eQTL 9.38e-01 -0.00576 0.0744 0.613 DC L1
ENSG00000112282 MED23 597993 sc-eQTL 3.80e-01 -0.0767 0.0871 0.613 DC L1
ENSG00000112299 VNN1 -487820 sc-eQTL 6.37e-01 -0.0379 0.0802 0.613 DC L1
ENSG00000112303 VNN2 -537224 sc-eQTL 5.68e-01 0.0491 0.0858 0.613 DC L1
ENSG00000112306 RPS12 -588334 sc-eQTL 5.49e-01 -0.0289 0.0481 0.613 DC L1
ENSG00000146409 SLC18B1 -587104 sc-eQTL 6.99e-01 -0.0295 0.0762 0.613 DC L1
ENSG00000286438 AL591115.1 -876893 sc-eQTL 9.68e-01 0.00276 0.0694 0.613 DC L1
ENSG00000079950 STX7 -286963 sc-eQTL 1.32e-01 0.0668 0.0441 0.613 Mono L1
ENSG00000093134 VNN3 -508530 sc-eQTL 2.46e-01 -0.0883 0.0759 0.613 Mono L1
ENSG00000112282 MED23 597993 sc-eQTL 3.75e-01 0.0641 0.0722 0.613 Mono L1
ENSG00000112299 VNN1 -487820 sc-eQTL 2.92e-01 -0.0864 0.0817 0.613 Mono L1
ENSG00000112303 VNN2 -537224 sc-eQTL 4.79e-01 -0.0409 0.0577 0.613 Mono L1
ENSG00000112306 RPS12 -588334 sc-eQTL 1.69e-01 -0.0476 0.0345 0.613 Mono L1
ENSG00000146409 SLC18B1 -587104 sc-eQTL 6.73e-01 0.029 0.0685 0.613 Mono L1
ENSG00000079950 STX7 -286963 sc-eQTL 6.58e-01 0.0294 0.0663 0.612 NK L1
ENSG00000112282 MED23 597993 sc-eQTL 8.02e-01 0.0152 0.0607 0.612 NK L1
ENSG00000112303 VNN2 -537224 sc-eQTL 1.64e-01 -0.115 0.0822 0.612 NK L1
ENSG00000112306 RPS12 -588334 sc-eQTL 6.38e-01 -0.0161 0.0342 0.612 NK L1
ENSG00000079950 STX7 -286963 sc-eQTL 2.58e-01 0.0763 0.0673 0.613 Other_T L1
ENSG00000112282 MED23 597993 sc-eQTL 6.06e-01 0.0434 0.0842 0.613 Other_T L1
ENSG00000112303 VNN2 -537224 sc-eQTL 3.42e-01 0.0776 0.0814 0.613 Other_T L1
ENSG00000112306 RPS12 -588334 sc-eQTL 7.83e-01 0.00891 0.0323 0.613 Other_T L1
ENSG00000146409 SLC18B1 -587104 sc-eQTL 4.55e-01 -0.0662 0.0885 0.613 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 -175240 sc-eQTL 4.26e-01 0.0746 0.0936 0.602 B_Activated L2
ENSG00000079950 STX7 -286963 sc-eQTL 9.98e-01 0.000225 0.0879 0.602 B_Activated L2
ENSG00000112282 MED23 597993 sc-eQTL 5.65e-01 -0.0562 0.0973 0.602 B_Activated L2
ENSG00000112303 VNN2 -537224 sc-eQTL 4.24e-02 -0.189 0.0925 0.602 B_Activated L2
ENSG00000112306 RPS12 -588334 sc-eQTL 9.80e-01 -0.00126 0.0501 0.602 B_Activated L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 7.07e-01 -0.033 0.0878 0.602 B_Activated L2
ENSG00000228495 LINC01013 94347 sc-eQTL 5.70e-02 0.159 0.0829 0.602 B_Activated L2
ENSG00000079931 MOXD1 -175240 sc-eQTL 7.45e-01 0.0276 0.0848 0.614 B_Intermediate L2
ENSG00000079950 STX7 -286963 sc-eQTL 6.63e-01 0.0242 0.0555 0.614 B_Intermediate L2
ENSG00000112282 MED23 597993 sc-eQTL 2.47e-01 -0.0977 0.0842 0.614 B_Intermediate L2
ENSG00000112303 VNN2 -537224 sc-eQTL 3.58e-01 -0.0768 0.0834 0.614 B_Intermediate L2
ENSG00000112306 RPS12 -588334 sc-eQTL 2.45e-01 -0.0594 0.051 0.614 B_Intermediate L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 9.21e-01 0.00917 0.0922 0.614 B_Intermediate L2
ENSG00000228495 LINC01013 94347 sc-eQTL 4.19e-01 -0.0633 0.0782 0.614 B_Intermediate L2
ENSG00000079931 MOXD1 -175240 sc-eQTL 7.08e-01 -0.0315 0.0842 0.614 B_Memory L2
ENSG00000079950 STX7 -286963 sc-eQTL 3.44e-01 0.0626 0.0659 0.614 B_Memory L2
ENSG00000112282 MED23 597993 sc-eQTL 9.31e-01 -0.0074 0.0851 0.614 B_Memory L2
ENSG00000112303 VNN2 -537224 sc-eQTL 6.81e-01 0.0356 0.0864 0.614 B_Memory L2
ENSG00000112306 RPS12 -588334 sc-eQTL 2.11e-01 -0.052 0.0415 0.614 B_Memory L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 9.16e-01 0.0092 0.0869 0.614 B_Memory L2
ENSG00000228495 LINC01013 94347 sc-eQTL 6.63e-02 -0.148 0.0803 0.614 B_Memory L2
ENSG00000079931 MOXD1 -175240 sc-eQTL 1.20e-01 -0.147 0.0942 0.613 B_Naive1 L2
ENSG00000079950 STX7 -286963 sc-eQTL 2.02e-01 0.0528 0.0412 0.613 B_Naive1 L2
ENSG00000112282 MED23 597993 sc-eQTL 7.02e-01 -0.0284 0.0741 0.613 B_Naive1 L2
ENSG00000112303 VNN2 -537224 sc-eQTL 4.96e-01 0.0548 0.0803 0.613 B_Naive1 L2
ENSG00000112306 RPS12 -588334 sc-eQTL 4.11e-02 -0.0932 0.0453 0.613 B_Naive1 L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 5.54e-01 0.0523 0.0883 0.613 B_Naive1 L2
ENSG00000228495 LINC01013 94347 sc-eQTL 5.26e-01 -0.0372 0.0585 0.613 B_Naive1 L2
ENSG00000079931 MOXD1 -175240 sc-eQTL 1.31e-01 -0.133 0.0881 0.612 B_Naive2 L2
ENSG00000079950 STX7 -286963 sc-eQTL 3.78e-01 0.0425 0.0481 0.612 B_Naive2 L2
ENSG00000112282 MED23 597993 sc-eQTL 8.66e-01 -0.0151 0.0891 0.612 B_Naive2 L2
ENSG00000112303 VNN2 -537224 sc-eQTL 9.99e-01 0.000148 0.0886 0.612 B_Naive2 L2
ENSG00000112306 RPS12 -588334 sc-eQTL 1.67e-02 -0.112 0.0463 0.612 B_Naive2 L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 1.12e-01 -0.142 0.0889 0.612 B_Naive2 L2
ENSG00000228495 LINC01013 94347 sc-eQTL 8.38e-02 -0.107 0.0616 0.612 B_Naive2 L2
ENSG00000079950 STX7 -286963 sc-eQTL 6.08e-01 0.0461 0.0896 0.614 CD4_CTL L2
ENSG00000112282 MED23 597993 sc-eQTL 5.97e-01 -0.0493 0.0932 0.614 CD4_CTL L2
ENSG00000112303 VNN2 -537224 sc-eQTL 2.59e-01 0.102 0.0902 0.614 CD4_CTL L2
ENSG00000112306 RPS12 -588334 sc-eQTL 3.52e-01 -0.0389 0.0417 0.614 CD4_CTL L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 5.73e-01 0.0475 0.0842 0.614 CD4_CTL L2
ENSG00000079950 STX7 -286963 sc-eQTL 9.08e-01 -0.00816 0.0705 0.613 CD4_Naive L2
ENSG00000112282 MED23 597993 sc-eQTL 6.04e-01 0.0312 0.0601 0.613 CD4_Naive L2
ENSG00000112303 VNN2 -537224 sc-eQTL 9.19e-01 0.00663 0.0653 0.613 CD4_Naive L2
ENSG00000112306 RPS12 -588334 sc-eQTL 2.24e-01 -0.0515 0.0422 0.613 CD4_Naive L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 1.50e-02 0.197 0.0804 0.613 CD4_Naive L2
ENSG00000079950 STX7 -286963 sc-eQTL 8.66e-01 0.0131 0.0778 0.613 CD4_TCM L2
ENSG00000112282 MED23 597993 sc-eQTL 4.77e-01 -0.0466 0.0654 0.613 CD4_TCM L2
ENSG00000112303 VNN2 -537224 sc-eQTL 7.86e-01 -0.0209 0.0767 0.613 CD4_TCM L2
ENSG00000112306 RPS12 -588334 sc-eQTL 8.81e-02 -0.0677 0.0395 0.613 CD4_TCM L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 1.78e-03 0.285 0.09 0.613 CD4_TCM L2
ENSG00000079950 STX7 -286963 sc-eQTL 1.82e-01 -0.122 0.0911 0.613 CD4_TEM L2
ENSG00000112282 MED23 597993 sc-eQTL 6.42e-01 0.0393 0.0842 0.613 CD4_TEM L2
ENSG00000112303 VNN2 -537224 sc-eQTL 4.71e-01 -0.0633 0.0877 0.613 CD4_TEM L2
ENSG00000112306 RPS12 -588334 sc-eQTL 1.09e-01 -0.0576 0.0358 0.613 CD4_TEM L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 2.09e-01 0.112 0.0892 0.613 CD4_TEM L2
ENSG00000079950 STX7 -286963 sc-eQTL 2.30e-01 0.0895 0.0744 0.613 CD8_CTL L2
ENSG00000112282 MED23 597993 sc-eQTL 9.30e-01 -0.00674 0.0765 0.613 CD8_CTL L2
ENSG00000112303 VNN2 -537224 sc-eQTL 3.25e-01 0.0836 0.0846 0.613 CD8_CTL L2
ENSG00000112306 RPS12 -588334 sc-eQTL 1.59e-01 -0.0638 0.0452 0.613 CD8_CTL L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 2.28e-01 0.106 0.0877 0.613 CD8_CTL L2
ENSG00000079950 STX7 -286963 sc-eQTL 9.45e-01 -0.00626 0.0901 0.613 CD8_Naive L2
ENSG00000112282 MED23 597993 sc-eQTL 4.39e-01 0.056 0.0723 0.613 CD8_Naive L2
ENSG00000112303 VNN2 -537224 sc-eQTL 4.70e-03 0.218 0.0762 0.613 CD8_Naive L2
ENSG00000112306 RPS12 -588334 sc-eQTL 6.25e-01 0.0218 0.0445 0.613 CD8_Naive L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 7.51e-01 -0.0284 0.0892 0.613 CD8_Naive L2
ENSG00000079950 STX7 -286963 sc-eQTL 1.84e-01 -0.122 0.0919 0.609 CD8_TCM L2
ENSG00000112282 MED23 597993 sc-eQTL 5.98e-01 -0.0489 0.0926 0.609 CD8_TCM L2
ENSG00000112303 VNN2 -537224 sc-eQTL 3.21e-01 -0.0908 0.0914 0.609 CD8_TCM L2
ENSG00000112306 RPS12 -588334 sc-eQTL 7.14e-01 -0.0164 0.0446 0.609 CD8_TCM L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 2.61e-01 0.11 0.0975 0.609 CD8_TCM L2
ENSG00000079950 STX7 -286963 sc-eQTL 5.12e-01 -0.0628 0.0956 0.623 CD8_TEM L2
ENSG00000112282 MED23 597993 sc-eQTL 1.46e-01 -0.134 0.0916 0.623 CD8_TEM L2
ENSG00000112303 VNN2 -537224 sc-eQTL 5.27e-01 0.0602 0.095 0.623 CD8_TEM L2
ENSG00000112306 RPS12 -588334 sc-eQTL 4.75e-01 -0.0366 0.0511 0.623 CD8_TEM L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 6.30e-03 0.262 0.0949 0.623 CD8_TEM L2
ENSG00000079950 STX7 -286963 sc-eQTL 8.30e-01 -0.0186 0.0863 0.615 MAIT L2
ENSG00000112282 MED23 597993 sc-eQTL 8.54e-01 0.0167 0.0902 0.615 MAIT L2
ENSG00000112303 VNN2 -537224 sc-eQTL 2.39e-01 0.103 0.0875 0.615 MAIT L2
ENSG00000112306 RPS12 -588334 sc-eQTL 3.97e-01 -0.0365 0.0431 0.615 MAIT L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 9.37e-01 -0.00716 0.0905 0.615 MAIT L2
ENSG00000079950 STX7 -286963 sc-eQTL 2.87e-01 0.0954 0.0893 0.616 NK_CD56bright L2
ENSG00000112282 MED23 597993 sc-eQTL 8.72e-01 0.0153 0.0947 0.616 NK_CD56bright L2
ENSG00000112303 VNN2 -537224 sc-eQTL 8.96e-01 0.0119 0.0909 0.616 NK_CD56bright L2
ENSG00000112306 RPS12 -588334 sc-eQTL 2.98e-01 -0.0528 0.0505 0.616 NK_CD56bright L2
ENSG00000079950 STX7 -286963 sc-eQTL 7.30e-01 0.0247 0.0713 0.61 NK_CD56dim L2
ENSG00000112282 MED23 597993 sc-eQTL 4.78e-01 -0.052 0.0732 0.61 NK_CD56dim L2
ENSG00000112303 VNN2 -537224 sc-eQTL 4.50e-01 -0.0674 0.0891 0.61 NK_CD56dim L2
ENSG00000112306 RPS12 -588334 sc-eQTL 7.16e-01 -0.0129 0.0354 0.61 NK_CD56dim L2
ENSG00000079950 STX7 -286963 sc-eQTL 2.19e-01 -0.107 0.087 0.614 NK_HLA L2
ENSG00000112282 MED23 597993 sc-eQTL 1.49e-01 0.127 0.0878 0.614 NK_HLA L2
ENSG00000112303 VNN2 -537224 sc-eQTL 6.26e-01 -0.0431 0.0883 0.614 NK_HLA L2
ENSG00000112306 RPS12 -588334 sc-eQTL 8.28e-01 -0.00898 0.0412 0.614 NK_HLA L2
ENSG00000079950 STX7 -286963 sc-eQTL 8.63e-01 -0.0134 0.0773 0.61 NK_cytokine L2
ENSG00000112282 MED23 597993 sc-eQTL 3.92e-01 0.0685 0.0798 0.61 NK_cytokine L2
ENSG00000112303 VNN2 -537224 sc-eQTL 2.65e-01 -0.0969 0.0867 0.61 NK_cytokine L2
ENSG00000112306 RPS12 -588334 sc-eQTL 9.99e-01 -4.17e-05 0.0472 0.61 NK_cytokine L2
ENSG00000079931 MOXD1 -175240 sc-eQTL 5.15e-01 0.061 0.0933 0.604 PB L2
ENSG00000079950 STX7 -286963 sc-eQTL 7.35e-01 0.0265 0.078 0.604 PB L2
ENSG00000112282 MED23 597993 sc-eQTL 7.70e-01 0.0312 0.106 0.604 PB L2
ENSG00000112303 VNN2 -537224 sc-eQTL 3.33e-01 0.0923 0.095 0.604 PB L2
ENSG00000112306 RPS12 -588334 sc-eQTL 7.12e-01 -0.0201 0.0541 0.604 PB L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 3.51e-01 0.0946 0.101 0.604 PB L2
ENSG00000228495 LINC01013 94347 sc-eQTL 9.07e-01 0.00777 0.0667 0.604 PB L2
ENSG00000079950 STX7 -286963 sc-eQTL 1.27e-01 0.121 0.079 0.615 Pro_T L2
ENSG00000112282 MED23 597993 sc-eQTL 5.83e-02 -0.169 0.0887 0.615 Pro_T L2
ENSG00000112303 VNN2 -537224 sc-eQTL 6.23e-01 -0.042 0.0852 0.615 Pro_T L2
ENSG00000112306 RPS12 -588334 sc-eQTL 4.11e-02 0.0656 0.0319 0.615 Pro_T L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 4.98e-01 -0.0566 0.0834 0.615 Pro_T L2
ENSG00000079950 STX7 -286963 sc-eQTL 4.03e-01 0.0729 0.087 0.613 Treg L2
ENSG00000112282 MED23 597993 sc-eQTL 5.23e-02 -0.173 0.0888 0.613 Treg L2
ENSG00000112303 VNN2 -537224 sc-eQTL 5.88e-01 0.0397 0.0733 0.613 Treg L2
ENSG00000112306 RPS12 -588334 sc-eQTL 1.36e-01 -0.0483 0.0323 0.613 Treg L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 9.30e-02 0.154 0.091 0.613 Treg L2
ENSG00000079950 STX7 -286963 sc-eQTL 1.13e-01 0.121 0.076 0.61 cDC L2
ENSG00000093134 VNN3 -508530 sc-eQTL 2.99e-01 0.0789 0.0757 0.61 cDC L2
ENSG00000112282 MED23 597993 sc-eQTL 2.85e-01 -0.106 0.0985 0.61 cDC L2
ENSG00000112299 VNN1 -487820 sc-eQTL 3.47e-01 -0.0841 0.0891 0.61 cDC L2
ENSG00000112303 VNN2 -537224 sc-eQTL 2.75e-01 0.095 0.0867 0.61 cDC L2
ENSG00000112306 RPS12 -588334 sc-eQTL 5.10e-01 -0.0283 0.0429 0.61 cDC L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 4.91e-01 -0.0586 0.085 0.61 cDC L2
ENSG00000286438 AL591115.1 -876893 sc-eQTL 4.77e-01 -0.0484 0.0679 0.61 cDC L2
ENSG00000079950 STX7 -286963 sc-eQTL 2.74e-01 0.0626 0.057 0.613 cMono_IL1B L2
ENSG00000093134 VNN3 -508530 sc-eQTL 4.73e-01 -0.058 0.0807 0.613 cMono_IL1B L2
ENSG00000112282 MED23 597993 sc-eQTL 1.35e-01 0.119 0.0795 0.613 cMono_IL1B L2
ENSG00000112299 VNN1 -487820 sc-eQTL 6.27e-01 -0.0397 0.0815 0.613 cMono_IL1B L2
ENSG00000112303 VNN2 -537224 sc-eQTL 8.66e-01 -0.011 0.0652 0.613 cMono_IL1B L2
ENSG00000112306 RPS12 -588334 sc-eQTL 1.63e-01 -0.0504 0.0361 0.613 cMono_IL1B L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 7.38e-01 0.0234 0.0699 0.613 cMono_IL1B L2
ENSG00000079950 STX7 -286963 sc-eQTL 6.54e-01 0.0281 0.0625 0.613 cMono_S100A L2
ENSG00000093134 VNN3 -508530 sc-eQTL 5.82e-01 -0.0431 0.0781 0.613 cMono_S100A L2
ENSG00000112282 MED23 597993 sc-eQTL 7.12e-01 0.0314 0.0848 0.613 cMono_S100A L2
ENSG00000112299 VNN1 -487820 sc-eQTL 1.95e-01 -0.11 0.0845 0.613 cMono_S100A L2
ENSG00000112303 VNN2 -537224 sc-eQTL 5.00e-01 -0.0375 0.0555 0.613 cMono_S100A L2
ENSG00000112306 RPS12 -588334 sc-eQTL 2.55e-01 -0.0456 0.0399 0.613 cMono_S100A L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 7.25e-01 0.0261 0.074 0.613 cMono_S100A L2
ENSG00000079950 STX7 -286963 sc-eQTL 4.32e-01 0.0801 0.102 0.624 gdT L2
ENSG00000112282 MED23 597993 sc-eQTL 7.92e-01 -0.0288 0.109 0.624 gdT L2
ENSG00000112303 VNN2 -537224 sc-eQTL 3.73e-02 0.234 0.111 0.624 gdT L2
ENSG00000112306 RPS12 -588334 sc-eQTL 7.88e-01 -0.0116 0.043 0.624 gdT L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 8.43e-01 -0.022 0.111 0.624 gdT L2
ENSG00000079950 STX7 -286963 sc-eQTL 2.53e-01 0.095 0.0829 0.604 intMono L2
ENSG00000093134 VNN3 -508530 sc-eQTL 7.64e-01 -0.0252 0.084 0.604 intMono L2
ENSG00000112282 MED23 597993 sc-eQTL 1.39e-01 -0.136 0.0917 0.604 intMono L2
ENSG00000112299 VNN1 -487820 sc-eQTL 2.99e-01 -0.0862 0.0828 0.604 intMono L2
ENSG00000112303 VNN2 -537224 sc-eQTL 5.71e-01 -0.0478 0.0843 0.604 intMono L2
ENSG00000112306 RPS12 -588334 sc-eQTL 5.92e-01 -0.0197 0.0367 0.604 intMono L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 6.60e-01 0.0393 0.0893 0.604 intMono L2
ENSG00000079950 STX7 -286963 sc-eQTL 3.01e-01 0.0634 0.0611 0.615 ncMono L2
ENSG00000093134 VNN3 -508530 sc-eQTL 6.80e-01 0.0357 0.0864 0.615 ncMono L2
ENSG00000112282 MED23 597993 sc-eQTL 5.44e-01 -0.0532 0.0875 0.615 ncMono L2
ENSG00000112299 VNN1 -487820 sc-eQTL 8.05e-02 -0.15 0.0852 0.615 ncMono L2
ENSG00000112303 VNN2 -537224 sc-eQTL 6.79e-01 -0.0342 0.0825 0.615 ncMono L2
ENSG00000112306 RPS12 -588334 sc-eQTL 3.58e-01 -0.0381 0.0413 0.615 ncMono L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 5.83e-01 0.0401 0.0731 0.615 ncMono L2
ENSG00000079950 STX7 -286963 sc-eQTL 5.43e-01 0.0443 0.0726 0.633 pDC L2
ENSG00000093134 VNN3 -508530 sc-eQTL 1.40e-02 -0.178 0.0718 0.633 pDC L2
ENSG00000112282 MED23 597993 sc-eQTL 3.72e-01 -0.0911 0.102 0.633 pDC L2
ENSG00000112299 VNN1 -487820 sc-eQTL 9.34e-01 -0.00615 0.0745 0.633 pDC L2
ENSG00000112303 VNN2 -537224 sc-eQTL 6.73e-01 -0.0375 0.0886 0.633 pDC L2
ENSG00000112306 RPS12 -588334 sc-eQTL 9.32e-01 -0.00523 0.0611 0.633 pDC L2
ENSG00000146409 SLC18B1 -587104 sc-eQTL 9.50e-01 -0.00567 0.0904 0.633 pDC L2
ENSG00000286438 AL591115.1 -876893 sc-eQTL 8.15e-01 0.0203 0.0865 0.633 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 -175240 sc-eQTL 5.63e-01 0.0521 0.09 0.613 B_Memory LOneK1K
ENSG00000079950 STX7 -286963 sc-eQTL 7.60e-01 0.0156 0.051 0.613 B_Memory LOneK1K
ENSG00000112282 MED23 597993 sc-eQTL 3.68e-01 -0.0704 0.078 0.613 B_Memory LOneK1K
ENSG00000112303 VNN2 -537224 sc-eQTL 9.72e-01 0.00284 0.0808 0.613 B_Memory LOneK1K
ENSG00000112306 RPS12 -588334 sc-eQTL 3.62e-01 -0.042 0.0459 0.613 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -587104 sc-eQTL 4.48e-01 0.0641 0.0843 0.613 B_Memory LOneK1K
ENSG00000228495 LINC01013 94347 sc-eQTL 6.83e-01 0.0333 0.0814 0.613 B_Memory LOneK1K
ENSG00000079931 MOXD1 -175240 sc-eQTL 4.85e-02 -0.187 0.0944 0.613 B_Naive LOneK1K
ENSG00000079950 STX7 -286963 sc-eQTL 4.06e-01 0.0325 0.039 0.613 B_Naive LOneK1K
ENSG00000112282 MED23 597993 sc-eQTL 5.79e-01 -0.0408 0.0733 0.613 B_Naive LOneK1K
ENSG00000112303 VNN2 -537224 sc-eQTL 4.95e-01 0.0519 0.0758 0.613 B_Naive LOneK1K
ENSG00000112306 RPS12 -588334 sc-eQTL 2.82e-02 -0.1 0.0454 0.613 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -587104 sc-eQTL 7.25e-01 -0.0305 0.0866 0.613 B_Naive LOneK1K
ENSG00000228495 LINC01013 94347 sc-eQTL 2.14e-01 -0.0683 0.0548 0.613 B_Naive LOneK1K
ENSG00000079950 STX7 -286963 sc-eQTL 3.01e-01 0.0493 0.0475 0.613 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -508530 sc-eQTL 4.03e-01 -0.065 0.0775 0.613 CD14_Mono LOneK1K
ENSG00000112282 MED23 597993 sc-eQTL 8.70e-02 0.127 0.0741 0.613 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -487820 sc-eQTL 5.44e-01 -0.0492 0.0809 0.613 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -537224 sc-eQTL 6.02e-01 -0.0279 0.0535 0.613 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -588334 sc-eQTL 4.66e-02 -0.0728 0.0364 0.613 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -587104 sc-eQTL 6.85e-01 0.0265 0.0653 0.613 CD14_Mono LOneK1K
ENSG00000079950 STX7 -286963 sc-eQTL 5.41e-02 0.112 0.0579 0.612 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -508530 sc-eQTL 6.16e-01 -0.0431 0.0858 0.612 CD16_Mono LOneK1K
ENSG00000112282 MED23 597993 sc-eQTL 2.40e-01 -0.0982 0.0834 0.612 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -487820 sc-eQTL 7.87e-02 -0.149 0.0845 0.612 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -537224 sc-eQTL 3.92e-01 -0.0687 0.0801 0.612 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -588334 sc-eQTL 9.33e-01 -0.00287 0.0341 0.612 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -587104 sc-eQTL 3.80e-01 0.0727 0.0825 0.612 CD16_Mono LOneK1K
ENSG00000079950 STX7 -286963 sc-eQTL 8.61e-01 0.0117 0.0668 0.61 NK_CD56dim LOneK1K
ENSG00000112282 MED23 597993 sc-eQTL 4.72e-01 0.0467 0.0647 0.61 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -537224 sc-eQTL 1.62e-01 -0.118 0.0841 0.61 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -588334 sc-eQTL 9.14e-01 -0.00373 0.0345 0.61 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 -487820 eQTL 0.0498 0.0442 0.0225 0.0 0.0 0.352
ENSG00000118523 CCN2 274863 pQTL 0.00104 -0.0701 0.0213 0.0 0.0 0.362

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079950 \N -286963 1.21e-06 9.2e-07 2.75e-07 1.01e-06 3.91e-07 5.92e-07 1.6e-06 4.37e-07 1.5e-06 5.99e-07 1.83e-06 7.63e-07 2.15e-06 2.96e-07 5.34e-07 9.85e-07 9.05e-07 7.89e-07 7.81e-07 5.97e-07 8.18e-07 1.69e-06 8.94e-07 5.65e-07 2.28e-06 7.46e-07 9.3e-07 7.19e-07 1.48e-06 1.27e-06 7.1e-07 2.98e-07 2.64e-07 6.19e-07 5.87e-07 4.82e-07 6.79e-07 2.71e-07 4.74e-07 2.97e-07 2.59e-07 1.46e-06 1.39e-07 6.51e-08 2.84e-07 1.59e-07 2.43e-07 5.98e-08 2.32e-07
ENSG00000093134 \N -508530 7.23e-07 3.47e-07 9.89e-08 2.96e-07 9.82e-08 1.71e-07 4.68e-07 1.55e-07 4.19e-07 2.28e-07 4.97e-07 3.48e-07 5.62e-07 1.07e-07 1.5e-07 2.14e-07 2.48e-07 3.67e-07 1.89e-07 1.17e-07 1.92e-07 3.49e-07 3.11e-07 1.29e-07 5.15e-07 2.55e-07 2.57e-07 1.97e-07 3.27e-07 3.93e-07 2.43e-07 7.59e-08 5.42e-08 1.39e-07 2.35e-07 7.57e-08 1.06e-07 7.98e-08 4.17e-08 5.54e-08 7.16e-08 3.27e-07 2.75e-08 2.04e-08 1.1e-07 1.84e-08 8.24e-08 3.3e-09 4.97e-08
ENSG00000228495 \N 94320 5.2e-06 5.54e-06 9.81e-07 3.49e-06 2.04e-06 1.71e-06 8.08e-06 1.58e-06 4.91e-06 3.41e-06 7.76e-06 2.92e-06 9.9e-06 2.24e-06 1.18e-06 4.63e-06 3e-06 3.78e-06 2.27e-06 2.41e-06 3.46e-06 7e-06 5.05e-06 2.75e-06 9.03e-06 2.8e-06 3.57e-06 1.9e-06 6.75e-06 6.83e-06 3.37e-06 8.14e-07 1.02e-06 2.89e-06 2.22e-06 2.05e-06 1.74e-06 1.46e-06 1.57e-06 1.01e-06 1.05e-06 7.48e-06 8.79e-07 1.97e-07 7.7e-07 1.2e-06 8.9e-07 6.93e-07 4.27e-07