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Genes within 1Mb (chr6:132105805:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 -295670 sc-eQTL 3.18e-01 -0.0901 0.0901 0.624 B L1
ENSG00000079950 STX7 -407393 sc-eQTL 3.61e-01 0.0312 0.034 0.624 B L1
ENSG00000112282 MED23 477563 sc-eQTL 5.12e-03 -0.189 0.0667 0.624 B L1
ENSG00000112303 VNN2 -657654 sc-eQTL 4.12e-01 0.0526 0.064 0.624 B L1
ENSG00000112306 RPS12 -708764 sc-eQTL 8.56e-03 -0.101 0.0381 0.624 B L1
ENSG00000118507 AKAP7 970338 sc-eQTL 4.90e-01 -0.0555 0.0803 0.624 B L1
ENSG00000146409 SLC18B1 -707534 sc-eQTL 4.67e-01 -0.0594 0.0814 0.624 B L1
ENSG00000228495 LINC01013 -26083 sc-eQTL 5.67e-05 -0.212 0.0515 0.624 B L1
ENSG00000079950 STX7 -407393 sc-eQTL 4.05e-01 -0.0547 0.0654 0.624 CD4T L1
ENSG00000112282 MED23 477563 sc-eQTL 4.96e-01 0.0355 0.052 0.624 CD4T L1
ENSG00000112303 VNN2 -657654 sc-eQTL 1.21e-01 0.0878 0.0564 0.624 CD4T L1
ENSG00000112306 RPS12 -708764 sc-eQTL 6.31e-02 -0.0715 0.0383 0.624 CD4T L1
ENSG00000118507 AKAP7 970338 sc-eQTL 9.89e-01 -0.00097 0.0698 0.624 CD4T L1
ENSG00000146409 SLC18B1 -707534 sc-eQTL 3.20e-01 0.0776 0.0779 0.624 CD4T L1
ENSG00000079950 STX7 -407393 sc-eQTL 9.67e-01 -0.00267 0.0645 0.624 CD8T L1
ENSG00000112282 MED23 477563 sc-eQTL 6.87e-02 0.115 0.0631 0.624 CD8T L1
ENSG00000112303 VNN2 -657654 sc-eQTL 6.44e-01 0.0348 0.0753 0.624 CD8T L1
ENSG00000112306 RPS12 -708764 sc-eQTL 1.39e-01 -0.0381 0.0256 0.624 CD8T L1
ENSG00000118507 AKAP7 970338 sc-eQTL 8.63e-01 -0.0125 0.0724 0.624 CD8T L1
ENSG00000146409 SLC18B1 -707534 sc-eQTL 9.71e-01 -0.00279 0.0779 0.624 CD8T L1
ENSG00000079950 STX7 -407393 sc-eQTL 4.99e-01 0.0403 0.0595 0.631 DC L1
ENSG00000093134 VNN3 -628960 sc-eQTL 3.22e-01 -0.0732 0.0737 0.631 DC L1
ENSG00000112282 MED23 477563 sc-eQTL 4.52e-01 0.0652 0.0866 0.631 DC L1
ENSG00000112299 VNN1 -608250 sc-eQTL 9.05e-01 0.0095 0.0798 0.631 DC L1
ENSG00000112303 VNN2 -657654 sc-eQTL 2.75e-01 -0.0932 0.0851 0.631 DC L1
ENSG00000112306 RPS12 -708764 sc-eQTL 3.16e-01 -0.048 0.0477 0.631 DC L1
ENSG00000118507 AKAP7 970338 sc-eQTL 5.38e-01 0.0526 0.0852 0.631 DC L1
ENSG00000146409 SLC18B1 -707534 sc-eQTL 7.32e-01 0.026 0.0757 0.631 DC L1
ENSG00000286438 AL591115.1 -997323 sc-eQTL 5.89e-01 -0.0372 0.0689 0.631 DC L1
ENSG00000079950 STX7 -407393 sc-eQTL 3.91e-01 0.0386 0.0449 0.624 Mono L1
ENSG00000093134 VNN3 -628960 sc-eQTL 1.11e-01 -0.123 0.0768 0.624 Mono L1
ENSG00000112282 MED23 477563 sc-eQTL 5.46e-01 0.0443 0.0733 0.624 Mono L1
ENSG00000112299 VNN1 -608250 sc-eQTL 1.56e-01 -0.118 0.0827 0.624 Mono L1
ENSG00000112303 VNN2 -657654 sc-eQTL 8.63e-01 0.0101 0.0586 0.624 Mono L1
ENSG00000112306 RPS12 -708764 sc-eQTL 7.54e-01 -0.011 0.0351 0.624 Mono L1
ENSG00000118507 AKAP7 970338 sc-eQTL 2.67e-01 0.0808 0.0726 0.624 Mono L1
ENSG00000146409 SLC18B1 -707534 sc-eQTL 1.77e-01 -0.0937 0.0692 0.624 Mono L1
ENSG00000079950 STX7 -407393 sc-eQTL 1.38e-01 0.0995 0.0668 0.622 NK L1
ENSG00000112282 MED23 477563 sc-eQTL 9.77e-01 0.00176 0.0614 0.622 NK L1
ENSG00000112303 VNN2 -657654 sc-eQTL 9.94e-01 -0.000677 0.0835 0.622 NK L1
ENSG00000112306 RPS12 -708764 sc-eQTL 2.05e-01 -0.0438 0.0344 0.622 NK L1
ENSG00000118507 AKAP7 970338 sc-eQTL 2.17e-01 -0.0906 0.0732 0.622 NK L1
ENSG00000079950 STX7 -407393 sc-eQTL 6.75e-01 0.0279 0.0665 0.624 Other_T L1
ENSG00000112282 MED23 477563 sc-eQTL 9.49e-01 0.00527 0.083 0.624 Other_T L1
ENSG00000112303 VNN2 -657654 sc-eQTL 6.96e-01 -0.0315 0.0804 0.624 Other_T L1
ENSG00000112306 RPS12 -708764 sc-eQTL 2.95e-01 -0.0334 0.0318 0.624 Other_T L1
ENSG00000118507 AKAP7 970338 sc-eQTL 9.67e-01 0.003 0.0726 0.624 Other_T L1
ENSG00000146409 SLC18B1 -707534 sc-eQTL 6.32e-01 -0.0418 0.0872 0.624 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 -295670 sc-eQTL 7.94e-01 0.0242 0.0925 0.63 B_Activated L2
ENSG00000079950 STX7 -407393 sc-eQTL 8.58e-01 0.0156 0.0867 0.63 B_Activated L2
ENSG00000112282 MED23 477563 sc-eQTL 4.00e-01 0.0809 0.0959 0.63 B_Activated L2
ENSG00000112303 VNN2 -657654 sc-eQTL 7.87e-01 0.0249 0.0923 0.63 B_Activated L2
ENSG00000112306 RPS12 -708764 sc-eQTL 4.63e-01 -0.0363 0.0494 0.63 B_Activated L2
ENSG00000118507 AKAP7 970338 sc-eQTL 4.16e-01 -0.078 0.0956 0.63 B_Activated L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 9.59e-01 0.00448 0.0866 0.63 B_Activated L2
ENSG00000228495 LINC01013 -26083 sc-eQTL 9.00e-02 -0.14 0.0819 0.63 B_Activated L2
ENSG00000079931 MOXD1 -295670 sc-eQTL 5.62e-01 -0.0477 0.0822 0.622 B_Intermediate L2
ENSG00000079950 STX7 -407393 sc-eQTL 9.56e-01 -0.00296 0.0538 0.622 B_Intermediate L2
ENSG00000112282 MED23 477563 sc-eQTL 5.48e-01 -0.0493 0.0818 0.622 B_Intermediate L2
ENSG00000112303 VNN2 -657654 sc-eQTL 9.12e-01 -0.009 0.0811 0.622 B_Intermediate L2
ENSG00000112306 RPS12 -708764 sc-eQTL 2.06e-01 -0.0628 0.0495 0.622 B_Intermediate L2
ENSG00000118507 AKAP7 970338 sc-eQTL 2.72e-01 0.0914 0.083 0.622 B_Intermediate L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 5.56e-01 -0.0527 0.0894 0.622 B_Intermediate L2
ENSG00000228495 LINC01013 -26083 sc-eQTL 9.92e-02 -0.125 0.0755 0.622 B_Intermediate L2
ENSG00000079931 MOXD1 -295670 sc-eQTL 5.87e-01 0.0452 0.0831 0.627 B_Memory L2
ENSG00000079950 STX7 -407393 sc-eQTL 1.04e-01 0.106 0.0648 0.627 B_Memory L2
ENSG00000112282 MED23 477563 sc-eQTL 6.55e-02 -0.154 0.0834 0.627 B_Memory L2
ENSG00000112303 VNN2 -657654 sc-eQTL 2.41e-01 -0.0999 0.0851 0.627 B_Memory L2
ENSG00000112306 RPS12 -708764 sc-eQTL 1.09e-01 -0.0658 0.0409 0.627 B_Memory L2
ENSG00000118507 AKAP7 970338 sc-eQTL 4.28e-01 0.0693 0.0874 0.627 B_Memory L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 8.22e-01 0.0193 0.0858 0.627 B_Memory L2
ENSG00000228495 LINC01013 -26083 sc-eQTL 8.75e-01 -0.0126 0.08 0.627 B_Memory L2
ENSG00000079931 MOXD1 -295670 sc-eQTL 1.10e-01 -0.153 0.0951 0.624 B_Naive1 L2
ENSG00000079950 STX7 -407393 sc-eQTL 1.15e-01 0.0658 0.0415 0.624 B_Naive1 L2
ENSG00000112282 MED23 477563 sc-eQTL 6.23e-03 -0.203 0.0736 0.624 B_Naive1 L2
ENSG00000112303 VNN2 -657654 sc-eQTL 6.05e-02 0.152 0.0805 0.624 B_Naive1 L2
ENSG00000112306 RPS12 -708764 sc-eQTL 2.24e-01 -0.0561 0.0461 0.624 B_Naive1 L2
ENSG00000118507 AKAP7 970338 sc-eQTL 4.84e-01 -0.0657 0.0936 0.624 B_Naive1 L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 4.92e-01 -0.0614 0.0891 0.624 B_Naive1 L2
ENSG00000228495 LINC01013 -26083 sc-eQTL 3.29e-03 -0.172 0.0579 0.624 B_Naive1 L2
ENSG00000079931 MOXD1 -295670 sc-eQTL 9.51e-01 -0.00553 0.0899 0.627 B_Naive2 L2
ENSG00000079950 STX7 -407393 sc-eQTL 7.27e-01 -0.0171 0.049 0.627 B_Naive2 L2
ENSG00000112282 MED23 477563 sc-eQTL 6.01e-01 -0.0474 0.0904 0.627 B_Naive2 L2
ENSG00000112303 VNN2 -657654 sc-eQTL 1.47e-01 0.13 0.0895 0.627 B_Naive2 L2
ENSG00000112306 RPS12 -708764 sc-eQTL 7.75e-02 -0.0839 0.0473 0.627 B_Naive2 L2
ENSG00000118507 AKAP7 970338 sc-eQTL 2.38e-01 -0.112 0.0948 0.627 B_Naive2 L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 5.84e-01 -0.0498 0.0908 0.627 B_Naive2 L2
ENSG00000228495 LINC01013 -26083 sc-eQTL 1.55e-04 -0.234 0.0609 0.627 B_Naive2 L2
ENSG00000079950 STX7 -407393 sc-eQTL 2.41e-01 0.102 0.0871 0.625 CD4_CTL L2
ENSG00000112282 MED23 477563 sc-eQTL 2.52e-01 -0.104 0.0905 0.625 CD4_CTL L2
ENSG00000112303 VNN2 -657654 sc-eQTL 9.25e-01 -0.00833 0.0881 0.625 CD4_CTL L2
ENSG00000112306 RPS12 -708764 sc-eQTL 4.21e-02 -0.0825 0.0403 0.625 CD4_CTL L2
ENSG00000118507 AKAP7 970338 sc-eQTL 8.98e-01 0.0111 0.0871 0.625 CD4_CTL L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 9.41e-02 0.137 0.0815 0.625 CD4_CTL L2
ENSG00000079950 STX7 -407393 sc-eQTL 9.55e-01 -0.004 0.0714 0.624 CD4_Naive L2
ENSG00000112282 MED23 477563 sc-eQTL 4.14e-01 0.0498 0.0609 0.624 CD4_Naive L2
ENSG00000112303 VNN2 -657654 sc-eQTL 3.94e-01 0.0564 0.0661 0.624 CD4_Naive L2
ENSG00000112306 RPS12 -708764 sc-eQTL 6.87e-02 -0.0779 0.0426 0.624 CD4_Naive L2
ENSG00000118507 AKAP7 970338 sc-eQTL 7.88e-01 -0.0215 0.0797 0.624 CD4_Naive L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 9.21e-01 0.00825 0.0826 0.624 CD4_Naive L2
ENSG00000079950 STX7 -407393 sc-eQTL 2.43e-01 -0.0908 0.0775 0.624 CD4_TCM L2
ENSG00000112282 MED23 477563 sc-eQTL 3.03e-01 -0.0673 0.0652 0.624 CD4_TCM L2
ENSG00000112303 VNN2 -657654 sc-eQTL 4.47e-01 0.0583 0.0765 0.624 CD4_TCM L2
ENSG00000112306 RPS12 -708764 sc-eQTL 1.01e-01 -0.065 0.0395 0.624 CD4_TCM L2
ENSG00000118507 AKAP7 970338 sc-eQTL 9.19e-01 -0.00772 0.0758 0.624 CD4_TCM L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 4.36e-01 0.0716 0.0918 0.624 CD4_TCM L2
ENSG00000079950 STX7 -407393 sc-eQTL 3.38e-01 -0.0862 0.0898 0.624 CD4_TEM L2
ENSG00000112282 MED23 477563 sc-eQTL 6.76e-01 -0.0347 0.0828 0.624 CD4_TEM L2
ENSG00000112303 VNN2 -657654 sc-eQTL 7.50e-01 -0.0275 0.0863 0.624 CD4_TEM L2
ENSG00000112306 RPS12 -708764 sc-eQTL 8.96e-01 -0.00462 0.0354 0.624 CD4_TEM L2
ENSG00000118507 AKAP7 970338 sc-eQTL 1.83e-01 -0.121 0.0907 0.624 CD4_TEM L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 8.17e-02 0.153 0.0874 0.624 CD4_TEM L2
ENSG00000079950 STX7 -407393 sc-eQTL 6.79e-01 -0.0306 0.0738 0.624 CD8_CTL L2
ENSG00000112282 MED23 477563 sc-eQTL 6.66e-01 0.0327 0.0756 0.624 CD8_CTL L2
ENSG00000112303 VNN2 -657654 sc-eQTL 7.51e-01 0.0266 0.0838 0.624 CD8_CTL L2
ENSG00000112306 RPS12 -708764 sc-eQTL 8.19e-01 0.0103 0.0449 0.624 CD8_CTL L2
ENSG00000118507 AKAP7 970338 sc-eQTL 8.31e-01 0.018 0.0846 0.624 CD8_CTL L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 4.47e-01 0.0662 0.0868 0.624 CD8_CTL L2
ENSG00000079950 STX7 -407393 sc-eQTL 2.42e-01 0.107 0.0915 0.624 CD8_Naive L2
ENSG00000112282 MED23 477563 sc-eQTL 2.40e-01 0.0866 0.0736 0.624 CD8_Naive L2
ENSG00000112303 VNN2 -657654 sc-eQTL 1.26e-01 0.121 0.0788 0.624 CD8_Naive L2
ENSG00000112306 RPS12 -708764 sc-eQTL 2.00e-01 -0.0581 0.0452 0.624 CD8_Naive L2
ENSG00000118507 AKAP7 970338 sc-eQTL 1.74e-01 -0.113 0.083 0.624 CD8_Naive L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 7.24e-01 -0.0322 0.091 0.624 CD8_Naive L2
ENSG00000079950 STX7 -407393 sc-eQTL 5.79e-01 0.0493 0.0888 0.625 CD8_TCM L2
ENSG00000112282 MED23 477563 sc-eQTL 7.10e-02 -0.161 0.0885 0.625 CD8_TCM L2
ENSG00000112303 VNN2 -657654 sc-eQTL 1.38e-02 -0.216 0.0868 0.625 CD8_TCM L2
ENSG00000112306 RPS12 -708764 sc-eQTL 2.88e-01 -0.0457 0.0429 0.625 CD8_TCM L2
ENSG00000118507 AKAP7 970338 sc-eQTL 8.95e-01 0.0126 0.0957 0.625 CD8_TCM L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 8.42e-01 -0.0188 0.0942 0.625 CD8_TCM L2
ENSG00000079950 STX7 -407393 sc-eQTL 7.08e-01 -0.0354 0.0943 0.626 CD8_TEM L2
ENSG00000112282 MED23 477563 sc-eQTL 4.71e-01 0.0655 0.0907 0.626 CD8_TEM L2
ENSG00000112303 VNN2 -657654 sc-eQTL 8.51e-01 0.0176 0.0938 0.626 CD8_TEM L2
ENSG00000112306 RPS12 -708764 sc-eQTL 1.00e+00 1.45e-05 0.0504 0.626 CD8_TEM L2
ENSG00000118507 AKAP7 970338 sc-eQTL 8.68e-01 -0.0153 0.0923 0.626 CD8_TEM L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 6.65e-01 -0.0413 0.0953 0.626 CD8_TEM L2
ENSG00000079950 STX7 -407393 sc-eQTL 8.38e-01 0.0172 0.0843 0.623 MAIT L2
ENSG00000112282 MED23 477563 sc-eQTL 9.90e-01 0.0011 0.0882 0.623 MAIT L2
ENSG00000112303 VNN2 -657654 sc-eQTL 8.73e-02 0.146 0.0852 0.623 MAIT L2
ENSG00000112306 RPS12 -708764 sc-eQTL 7.61e-02 -0.0746 0.0419 0.623 MAIT L2
ENSG00000118507 AKAP7 970338 sc-eQTL 8.43e-01 0.0173 0.0871 0.623 MAIT L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 9.96e-01 0.000395 0.0884 0.623 MAIT L2
ENSG00000079950 STX7 -407393 sc-eQTL 7.38e-01 0.03 0.0894 0.629 NK_CD56bright L2
ENSG00000112282 MED23 477563 sc-eQTL 5.81e-01 0.0522 0.0945 0.629 NK_CD56bright L2
ENSG00000112303 VNN2 -657654 sc-eQTL 7.01e-01 -0.0349 0.0908 0.629 NK_CD56bright L2
ENSG00000112306 RPS12 -708764 sc-eQTL 5.83e-01 -0.0278 0.0505 0.629 NK_CD56bright L2
ENSG00000118507 AKAP7 970338 sc-eQTL 2.85e-02 -0.2 0.0906 0.629 NK_CD56bright L2
ENSG00000079950 STX7 -407393 sc-eQTL 4.67e-01 0.0518 0.071 0.621 NK_CD56dim L2
ENSG00000112282 MED23 477563 sc-eQTL 6.50e-01 0.0332 0.073 0.621 NK_CD56dim L2
ENSG00000112303 VNN2 -657654 sc-eQTL 3.33e-01 -0.086 0.0887 0.621 NK_CD56dim L2
ENSG00000112306 RPS12 -708764 sc-eQTL 7.30e-02 -0.0631 0.035 0.621 NK_CD56dim L2
ENSG00000118507 AKAP7 970338 sc-eQTL 2.24e-01 -0.0943 0.0773 0.621 NK_CD56dim L2
ENSG00000079950 STX7 -407393 sc-eQTL 4.96e-01 -0.0601 0.0881 0.628 NK_HLA L2
ENSG00000112282 MED23 477563 sc-eQTL 8.39e-01 0.0181 0.0891 0.628 NK_HLA L2
ENSG00000112303 VNN2 -657654 sc-eQTL 5.56e-01 0.0526 0.0892 0.628 NK_HLA L2
ENSG00000112306 RPS12 -708764 sc-eQTL 6.92e-01 -0.0165 0.0416 0.628 NK_HLA L2
ENSG00000118507 AKAP7 970338 sc-eQTL 5.60e-01 0.0538 0.0923 0.628 NK_HLA L2
ENSG00000079950 STX7 -407393 sc-eQTL 2.09e-02 0.178 0.0766 0.621 NK_cytokine L2
ENSG00000112282 MED23 477563 sc-eQTL 6.73e-01 -0.0338 0.0802 0.621 NK_cytokine L2
ENSG00000112303 VNN2 -657654 sc-eQTL 3.24e-01 0.086 0.087 0.621 NK_cytokine L2
ENSG00000112306 RPS12 -708764 sc-eQTL 2.46e-01 -0.0549 0.0472 0.621 NK_cytokine L2
ENSG00000118507 AKAP7 970338 sc-eQTL 9.37e-01 -0.00641 0.081 0.621 NK_cytokine L2
ENSG00000079931 MOXD1 -295670 sc-eQTL 9.26e-01 -0.00884 0.0948 0.611 PB L2
ENSG00000079950 STX7 -407393 sc-eQTL 1.56e-01 0.112 0.0785 0.611 PB L2
ENSG00000112282 MED23 477563 sc-eQTL 5.89e-02 -0.202 0.106 0.611 PB L2
ENSG00000112303 VNN2 -657654 sc-eQTL 1.10e-01 0.154 0.0956 0.611 PB L2
ENSG00000112306 RPS12 -708764 sc-eQTL 5.72e-01 -0.031 0.0548 0.611 PB L2
ENSG00000118507 AKAP7 970338 sc-eQTL 4.47e-01 0.0797 0.105 0.611 PB L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 6.82e-01 -0.0422 0.103 0.611 PB L2
ENSG00000228495 LINC01013 -26083 sc-eQTL 5.76e-01 0.0379 0.0676 0.611 PB L2
ENSG00000079950 STX7 -407393 sc-eQTL 1.36e-01 0.12 0.0802 0.624 Pro_T L2
ENSG00000112282 MED23 477563 sc-eQTL 5.55e-01 0.0536 0.0907 0.624 Pro_T L2
ENSG00000112303 VNN2 -657654 sc-eQTL 4.07e-01 -0.0717 0.0864 0.624 Pro_T L2
ENSG00000112306 RPS12 -708764 sc-eQTL 9.50e-01 -0.00207 0.0327 0.624 Pro_T L2
ENSG00000118507 AKAP7 970338 sc-eQTL 7.54e-01 0.0244 0.0778 0.624 Pro_T L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 7.81e-02 -0.149 0.0841 0.624 Pro_T L2
ENSG00000079950 STX7 -407393 sc-eQTL 8.84e-01 0.0128 0.0873 0.624 Treg L2
ENSG00000112282 MED23 477563 sc-eQTL 4.47e-01 0.0683 0.0897 0.624 Treg L2
ENSG00000112303 VNN2 -657654 sc-eQTL 4.16e-01 0.0598 0.0734 0.624 Treg L2
ENSG00000112306 RPS12 -708764 sc-eQTL 7.82e-01 -0.00899 0.0325 0.624 Treg L2
ENSG00000118507 AKAP7 970338 sc-eQTL 7.65e-01 0.0231 0.0774 0.624 Treg L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 3.90e-02 0.189 0.0909 0.624 Treg L2
ENSG00000079950 STX7 -407393 sc-eQTL 8.67e-01 0.0127 0.0759 0.634 cDC L2
ENSG00000093134 VNN3 -628960 sc-eQTL 4.71e-01 -0.0543 0.0753 0.634 cDC L2
ENSG00000112282 MED23 477563 sc-eQTL 6.78e-01 0.0408 0.098 0.634 cDC L2
ENSG00000112299 VNN1 -608250 sc-eQTL 8.63e-01 0.0153 0.0886 0.634 cDC L2
ENSG00000112303 VNN2 -657654 sc-eQTL 7.58e-01 0.0266 0.0863 0.634 cDC L2
ENSG00000112306 RPS12 -708764 sc-eQTL 5.00e-01 -0.0288 0.0426 0.634 cDC L2
ENSG00000118507 AKAP7 970338 sc-eQTL 6.79e-01 -0.0394 0.0951 0.634 cDC L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 7.57e-01 -0.0262 0.0844 0.634 cDC L2
ENSG00000286438 AL591115.1 -997323 sc-eQTL 4.92e-01 -0.0464 0.0674 0.634 cDC L2
ENSG00000079950 STX7 -407393 sc-eQTL 6.66e-01 0.0249 0.0576 0.624 cMono_IL1B L2
ENSG00000093134 VNN3 -628960 sc-eQTL 2.65e-01 -0.0908 0.0812 0.624 cMono_IL1B L2
ENSG00000112282 MED23 477563 sc-eQTL 5.38e-01 0.0497 0.0805 0.624 cMono_IL1B L2
ENSG00000112299 VNN1 -608250 sc-eQTL 2.82e-01 -0.0884 0.082 0.624 cMono_IL1B L2
ENSG00000112303 VNN2 -657654 sc-eQTL 7.09e-01 0.0245 0.0657 0.624 cMono_IL1B L2
ENSG00000112306 RPS12 -708764 sc-eQTL 7.58e-01 0.0112 0.0365 0.624 cMono_IL1B L2
ENSG00000118507 AKAP7 970338 sc-eQTL 2.40e-01 0.0921 0.0782 0.624 cMono_IL1B L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 1.27e-02 -0.174 0.0694 0.624 cMono_IL1B L2
ENSG00000079950 STX7 -407393 sc-eQTL 8.10e-01 -0.015 0.0621 0.624 cMono_S100A L2
ENSG00000093134 VNN3 -628960 sc-eQTL 6.28e-01 -0.0377 0.0776 0.624 cMono_S100A L2
ENSG00000112282 MED23 477563 sc-eQTL 9.08e-01 -0.00979 0.0842 0.624 cMono_S100A L2
ENSG00000112299 VNN1 -608250 sc-eQTL 1.32e-01 -0.127 0.0838 0.624 cMono_S100A L2
ENSG00000112303 VNN2 -657654 sc-eQTL 5.41e-01 0.0337 0.0551 0.624 cMono_S100A L2
ENSG00000112306 RPS12 -708764 sc-eQTL 7.38e-01 0.0133 0.0397 0.624 cMono_S100A L2
ENSG00000118507 AKAP7 970338 sc-eQTL 6.32e-01 0.0396 0.0824 0.624 cMono_S100A L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 4.77e-01 0.0523 0.0735 0.624 cMono_S100A L2
ENSG00000079950 STX7 -407393 sc-eQTL 2.87e-01 -0.106 0.0995 0.642 gdT L2
ENSG00000112282 MED23 477563 sc-eQTL 4.34e-01 -0.084 0.107 0.642 gdT L2
ENSG00000112303 VNN2 -657654 sc-eQTL 9.41e-01 -0.00822 0.111 0.642 gdT L2
ENSG00000112306 RPS12 -708764 sc-eQTL 8.78e-01 0.00646 0.0421 0.642 gdT L2
ENSG00000118507 AKAP7 970338 sc-eQTL 9.51e-01 0.00694 0.112 0.642 gdT L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 1.98e-01 0.14 0.108 0.642 gdT L2
ENSG00000079950 STX7 -407393 sc-eQTL 4.30e-01 0.0665 0.0841 0.624 intMono L2
ENSG00000093134 VNN3 -628960 sc-eQTL 2.21e-01 -0.104 0.0847 0.624 intMono L2
ENSG00000112282 MED23 477563 sc-eQTL 6.08e-02 -0.175 0.0926 0.624 intMono L2
ENSG00000112299 VNN1 -608250 sc-eQTL 4.64e-01 -0.0617 0.084 0.624 intMono L2
ENSG00000112303 VNN2 -657654 sc-eQTL 9.74e-01 -0.00281 0.0855 0.624 intMono L2
ENSG00000112306 RPS12 -708764 sc-eQTL 4.02e-01 -0.0312 0.0371 0.624 intMono L2
ENSG00000118507 AKAP7 970338 sc-eQTL 2.85e-01 0.0975 0.0909 0.624 intMono L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 7.35e-01 0.0307 0.0905 0.624 intMono L2
ENSG00000079950 STX7 -407393 sc-eQTL 1.83e-01 0.0846 0.0633 0.633 ncMono L2
ENSG00000093134 VNN3 -628960 sc-eQTL 7.26e-01 -0.0315 0.0897 0.633 ncMono L2
ENSG00000112282 MED23 477563 sc-eQTL 7.67e-01 0.027 0.0909 0.633 ncMono L2
ENSG00000112299 VNN1 -608250 sc-eQTL 3.23e-01 0.0881 0.0889 0.633 ncMono L2
ENSG00000112303 VNN2 -657654 sc-eQTL 6.01e-01 0.0448 0.0856 0.633 ncMono L2
ENSG00000112306 RPS12 -708764 sc-eQTL 1.98e-03 -0.131 0.0419 0.633 ncMono L2
ENSG00000118507 AKAP7 970338 sc-eQTL 8.47e-01 -0.0171 0.0881 0.633 ncMono L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 8.78e-01 -0.0117 0.0759 0.633 ncMono L2
ENSG00000079950 STX7 -407393 sc-eQTL 3.79e-01 0.0642 0.0727 0.65 pDC L2
ENSG00000093134 VNN3 -628960 sc-eQTL 1.93e-01 -0.0955 0.0729 0.65 pDC L2
ENSG00000112282 MED23 477563 sc-eQTL 5.14e-01 0.0668 0.102 0.65 pDC L2
ENSG00000112299 VNN1 -608250 sc-eQTL 3.82e-01 -0.0653 0.0745 0.65 pDC L2
ENSG00000112303 VNN2 -657654 sc-eQTL 6.46e-01 -0.0409 0.0888 0.65 pDC L2
ENSG00000112306 RPS12 -708764 sc-eQTL 3.11e-01 -0.0619 0.061 0.65 pDC L2
ENSG00000118507 AKAP7 970338 sc-eQTL 4.82e-02 0.164 0.0824 0.65 pDC L2
ENSG00000146409 SLC18B1 -707534 sc-eQTL 4.61e-01 0.0668 0.0904 0.65 pDC L2
ENSG00000286438 AL591115.1 -997323 sc-eQTL 8.75e-01 -0.0137 0.0867 0.65 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 -295670 sc-eQTL 3.96e-01 0.0747 0.0879 0.624 B_Memory LOneK1K
ENSG00000079950 STX7 -407393 sc-eQTL 6.78e-01 0.0207 0.0499 0.624 B_Memory LOneK1K
ENSG00000112282 MED23 477563 sc-eQTL 3.91e-01 -0.0656 0.0762 0.624 B_Memory LOneK1K
ENSG00000112303 VNN2 -657654 sc-eQTL 4.97e-01 -0.0536 0.0788 0.624 B_Memory LOneK1K
ENSG00000112306 RPS12 -708764 sc-eQTL 3.56e-01 -0.0415 0.0449 0.624 B_Memory LOneK1K
ENSG00000118507 AKAP7 970338 sc-eQTL 5.01e-01 0.0523 0.0775 0.624 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -707534 sc-eQTL 8.96e-01 -0.0108 0.0825 0.624 B_Memory LOneK1K
ENSG00000228495 LINC01013 -26083 sc-eQTL 2.80e-02 -0.174 0.0787 0.624 B_Memory LOneK1K
ENSG00000079931 MOXD1 -295670 sc-eQTL 1.30e-01 -0.143 0.0943 0.624 B_Naive LOneK1K
ENSG00000079950 STX7 -407393 sc-eQTL 4.53e-01 0.0292 0.0388 0.624 B_Naive LOneK1K
ENSG00000112282 MED23 477563 sc-eQTL 3.51e-03 -0.211 0.0716 0.624 B_Naive LOneK1K
ENSG00000112303 VNN2 -657654 sc-eQTL 2.13e-02 0.173 0.0746 0.624 B_Naive LOneK1K
ENSG00000112306 RPS12 -708764 sc-eQTL 1.36e-01 -0.0681 0.0455 0.624 B_Naive LOneK1K
ENSG00000118507 AKAP7 970338 sc-eQTL 2.85e-01 -0.0984 0.0918 0.624 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -707534 sc-eQTL 6.37e-01 -0.0407 0.0862 0.624 B_Naive LOneK1K
ENSG00000228495 LINC01013 -26083 sc-eQTL 5.59e-05 -0.217 0.0527 0.624 B_Naive LOneK1K
ENSG00000079950 STX7 -407393 sc-eQTL 7.89e-01 0.013 0.0484 0.624 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -628960 sc-eQTL 2.44e-01 -0.0918 0.0787 0.624 CD14_Mono LOneK1K
ENSG00000112282 MED23 477563 sc-eQTL 4.39e-01 0.0588 0.0757 0.624 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -608250 sc-eQTL 1.34e-01 -0.123 0.0819 0.624 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -657654 sc-eQTL 7.49e-01 0.0175 0.0544 0.624 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -708764 sc-eQTL 7.50e-01 0.0119 0.0373 0.624 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 970338 sc-eQTL 2.97e-01 0.0776 0.0743 0.624 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -707534 sc-eQTL 1.46e-01 -0.0963 0.0661 0.624 CD14_Mono LOneK1K
ENSG00000079950 STX7 -407393 sc-eQTL 5.37e-02 0.114 0.059 0.625 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -628960 sc-eQTL 1.68e-01 -0.12 0.0871 0.625 CD16_Mono LOneK1K
ENSG00000112282 MED23 477563 sc-eQTL 5.63e-01 -0.0493 0.0852 0.625 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -608250 sc-eQTL 7.40e-01 0.0288 0.0867 0.625 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -657654 sc-eQTL 8.73e-01 0.0131 0.0818 0.625 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -708764 sc-eQTL 3.37e-02 -0.0734 0.0343 0.625 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 970338 sc-eQTL 4.65e-01 0.0639 0.0873 0.625 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -707534 sc-eQTL 4.33e-01 0.066 0.0841 0.625 CD16_Mono LOneK1K
ENSG00000079950 STX7 -407393 sc-eQTL 1.33e-01 0.101 0.0669 0.621 NK_CD56dim LOneK1K
ENSG00000112282 MED23 477563 sc-eQTL 7.71e-01 0.019 0.0653 0.621 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -657654 sc-eQTL 9.84e-01 0.00172 0.0852 0.621 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -708764 sc-eQTL 1.68e-01 -0.0479 0.0346 0.621 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 970338 sc-eQTL 5.06e-01 -0.0479 0.072 0.621 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 -608250 eQTL 0.0427 0.0423 0.0209 0.0 0.0 0.416
ENSG00000118523 CCN2 154433 pQTL 7.99e-05 -0.0817 0.0206 0.0 0.0 0.415

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina