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Genes within 1Mb (chr6:132024566:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 961244 sc-eQTL 1.46e-02 -0.153 0.0623 0.346 B L1
ENSG00000079931 MOXD1 -376909 sc-eQTL 7.69e-01 -0.0271 0.0922 0.346 B L1
ENSG00000079950 STX7 -488632 sc-eQTL 5.24e-01 -0.0222 0.0347 0.346 B L1
ENSG00000112282 MED23 396324 sc-eQTL 9.08e-03 -0.18 0.0682 0.346 B L1
ENSG00000112303 VNN2 -738893 sc-eQTL 6.84e-01 -0.0266 0.0653 0.346 B L1
ENSG00000112306 RPS12 -790003 sc-eQTL 4.37e-01 -0.0308 0.0395 0.346 B L1
ENSG00000118507 AKAP7 889099 sc-eQTL 9.48e-01 -0.00536 0.0821 0.346 B L1
ENSG00000146409 SLC18B1 -788773 sc-eQTL 4.35e-01 -0.065 0.0831 0.346 B L1
ENSG00000228495 LINC01013 -107322 sc-eQTL 1.88e-01 -0.0718 0.0544 0.346 B L1
ENSG00000079819 EPB41L2 961244 sc-eQTL 4.21e-01 -0.0668 0.0828 0.346 CD4T L1
ENSG00000079950 STX7 -488632 sc-eQTL 1.23e-01 -0.104 0.0673 0.346 CD4T L1
ENSG00000112282 MED23 396324 sc-eQTL 9.79e-01 0.00142 0.0537 0.346 CD4T L1
ENSG00000112303 VNN2 -738893 sc-eQTL 6.10e-02 0.109 0.0581 0.346 CD4T L1
ENSG00000112306 RPS12 -790003 sc-eQTL 6.49e-01 -0.0182 0.0398 0.346 CD4T L1
ENSG00000118507 AKAP7 889099 sc-eQTL 9.87e-02 0.119 0.0715 0.346 CD4T L1
ENSG00000146409 SLC18B1 -788773 sc-eQTL 3.15e-01 0.0809 0.0804 0.346 CD4T L1
ENSG00000079950 STX7 -488632 sc-eQTL 1.87e-01 -0.0873 0.0659 0.346 CD8T L1
ENSG00000112282 MED23 396324 sc-eQTL 8.81e-01 0.00978 0.0652 0.346 CD8T L1
ENSG00000112303 VNN2 -738893 sc-eQTL 6.98e-01 0.03 0.0773 0.346 CD8T L1
ENSG00000112306 RPS12 -790003 sc-eQTL 9.94e-01 0.000205 0.0264 0.346 CD8T L1
ENSG00000118507 AKAP7 889099 sc-eQTL 2.01e-01 0.0949 0.074 0.346 CD8T L1
ENSG00000146409 SLC18B1 -788773 sc-eQTL 5.00e-01 0.0539 0.0798 0.346 CD8T L1
ENSG00000079819 EPB41L2 961244 sc-eQTL 8.90e-01 0.00947 0.0682 0.356 DC L1
ENSG00000079950 STX7 -488632 sc-eQTL 3.68e-01 0.0542 0.0601 0.356 DC L1
ENSG00000093134 VNN3 -710199 sc-eQTL 6.73e-01 0.0315 0.0747 0.356 DC L1
ENSG00000112282 MED23 396324 sc-eQTL 7.44e-01 0.0287 0.0877 0.356 DC L1
ENSG00000112299 VNN1 -689489 sc-eQTL 1.61e-01 0.113 0.0802 0.356 DC L1
ENSG00000112303 VNN2 -738893 sc-eQTL 9.53e-01 0.00513 0.0863 0.356 DC L1
ENSG00000112306 RPS12 -790003 sc-eQTL 5.35e-01 -0.03 0.0483 0.356 DC L1
ENSG00000118507 AKAP7 889099 sc-eQTL 1.21e-01 -0.134 0.0857 0.356 DC L1
ENSG00000146409 SLC18B1 -788773 sc-eQTL 4.34e-01 0.06 0.0764 0.356 DC L1
ENSG00000079819 EPB41L2 961244 sc-eQTL 2.87e-01 0.0806 0.0755 0.346 Mono L1
ENSG00000079950 STX7 -488632 sc-eQTL 7.01e-01 -0.0173 0.0451 0.346 Mono L1
ENSG00000093134 VNN3 -710199 sc-eQTL 9.65e-01 -0.00344 0.0775 0.346 Mono L1
ENSG00000112282 MED23 396324 sc-eQTL 4.39e-01 0.057 0.0735 0.346 Mono L1
ENSG00000112299 VNN1 -689489 sc-eQTL 2.62e-01 0.0935 0.0831 0.346 Mono L1
ENSG00000112303 VNN2 -738893 sc-eQTL 3.28e-01 -0.0576 0.0587 0.346 Mono L1
ENSG00000112306 RPS12 -790003 sc-eQTL 2.87e-01 -0.0375 0.0352 0.346 Mono L1
ENSG00000118507 AKAP7 889099 sc-eQTL 7.45e-01 -0.0238 0.073 0.346 Mono L1
ENSG00000146409 SLC18B1 -788773 sc-eQTL 1.65e-01 -0.0968 0.0694 0.346 Mono L1
ENSG00000079950 STX7 -488632 sc-eQTL 1.80e-01 -0.0909 0.0676 0.345 NK L1
ENSG00000112282 MED23 396324 sc-eQTL 4.78e-01 0.0441 0.062 0.345 NK L1
ENSG00000112303 VNN2 -738893 sc-eQTL 3.33e-01 -0.0818 0.0843 0.345 NK L1
ENSG00000112306 RPS12 -790003 sc-eQTL 9.38e-01 -0.00273 0.035 0.345 NK L1
ENSG00000118507 AKAP7 889099 sc-eQTL 8.80e-01 0.0112 0.0743 0.345 NK L1
ENSG00000079819 EPB41L2 961244 sc-eQTL 7.43e-01 -0.0244 0.0745 0.346 Other_T L1
ENSG00000079950 STX7 -488632 sc-eQTL 4.48e-01 -0.0512 0.0673 0.346 Other_T L1
ENSG00000112282 MED23 396324 sc-eQTL 9.48e-01 -0.00555 0.0842 0.346 Other_T L1
ENSG00000112303 VNN2 -738893 sc-eQTL 2.74e-02 0.179 0.0806 0.346 Other_T L1
ENSG00000112306 RPS12 -790003 sc-eQTL 6.81e-01 0.0133 0.0323 0.346 Other_T L1
ENSG00000118507 AKAP7 889099 sc-eQTL 9.71e-01 -0.00271 0.0736 0.346 Other_T L1
ENSG00000146409 SLC18B1 -788773 sc-eQTL 2.74e-01 -0.0968 0.0882 0.346 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 961244 sc-eQTL 9.18e-01 0.00846 0.0818 0.347 B_Activated L2
ENSG00000079931 MOXD1 -376909 sc-eQTL 4.93e-01 0.0637 0.0927 0.347 B_Activated L2
ENSG00000079950 STX7 -488632 sc-eQTL 4.63e-01 -0.064 0.0869 0.347 B_Activated L2
ENSG00000112282 MED23 396324 sc-eQTL 1.84e-01 -0.128 0.096 0.347 B_Activated L2
ENSG00000112303 VNN2 -738893 sc-eQTL 2.41e-01 0.109 0.0923 0.347 B_Activated L2
ENSG00000112306 RPS12 -790003 sc-eQTL 9.27e-01 0.00458 0.0497 0.347 B_Activated L2
ENSG00000118507 AKAP7 889099 sc-eQTL 3.29e-01 0.0939 0.0959 0.347 B_Activated L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 8.77e-01 -0.0135 0.087 0.347 B_Activated L2
ENSG00000228495 LINC01013 -107322 sc-eQTL 8.97e-01 0.0108 0.0829 0.347 B_Activated L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 2.95e-02 -0.186 0.0851 0.348 B_Intermediate L2
ENSG00000079931 MOXD1 -376909 sc-eQTL 2.63e-01 0.0932 0.083 0.348 B_Intermediate L2
ENSG00000079950 STX7 -488632 sc-eQTL 2.62e-01 -0.0611 0.0543 0.348 B_Intermediate L2
ENSG00000112282 MED23 396324 sc-eQTL 2.64e-02 -0.183 0.0819 0.348 B_Intermediate L2
ENSG00000112303 VNN2 -738893 sc-eQTL 8.76e-01 0.0128 0.0821 0.348 B_Intermediate L2
ENSG00000112306 RPS12 -790003 sc-eQTL 3.17e-01 -0.0503 0.0501 0.348 B_Intermediate L2
ENSG00000118507 AKAP7 889099 sc-eQTL 2.62e-01 0.0945 0.084 0.348 B_Intermediate L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 8.37e-01 0.0186 0.0905 0.348 B_Intermediate L2
ENSG00000228495 LINC01013 -107322 sc-eQTL 1.48e-01 0.111 0.0766 0.348 B_Intermediate L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 1.28e-01 -0.124 0.0809 0.349 B_Memory L2
ENSG00000079931 MOXD1 -376909 sc-eQTL 5.09e-01 0.0557 0.0842 0.349 B_Memory L2
ENSG00000079950 STX7 -488632 sc-eQTL 4.93e-01 0.0454 0.0661 0.349 B_Memory L2
ENSG00000112282 MED23 396324 sc-eQTL 3.09e-01 -0.0867 0.085 0.349 B_Memory L2
ENSG00000112303 VNN2 -738893 sc-eQTL 5.57e-01 -0.0509 0.0865 0.349 B_Memory L2
ENSG00000112306 RPS12 -790003 sc-eQTL 4.96e-01 -0.0284 0.0417 0.349 B_Memory L2
ENSG00000118507 AKAP7 889099 sc-eQTL 2.20e-02 0.202 0.0877 0.349 B_Memory L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 1.41e-01 -0.128 0.0866 0.349 B_Memory L2
ENSG00000228495 LINC01013 -107322 sc-eQTL 9.68e-01 -0.00327 0.0811 0.349 B_Memory L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 1.49e-01 -0.102 0.0707 0.346 B_Naive1 L2
ENSG00000079931 MOXD1 -376909 sc-eQTL 7.23e-01 -0.0342 0.0965 0.346 B_Naive1 L2
ENSG00000079950 STX7 -488632 sc-eQTL 7.84e-01 -0.0116 0.0422 0.346 B_Naive1 L2
ENSG00000112282 MED23 396324 sc-eQTL 1.15e-02 -0.19 0.0744 0.346 B_Naive1 L2
ENSG00000112303 VNN2 -738893 sc-eQTL 8.87e-01 0.0117 0.0819 0.346 B_Naive1 L2
ENSG00000112306 RPS12 -790003 sc-eQTL 1.57e-01 -0.066 0.0464 0.346 B_Naive1 L2
ENSG00000118507 AKAP7 889099 sc-eQTL 7.21e-01 -0.0338 0.0945 0.346 B_Naive1 L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 7.84e-02 -0.158 0.0893 0.346 B_Naive1 L2
ENSG00000228495 LINC01013 -107322 sc-eQTL 3.26e-01 -0.0585 0.0595 0.346 B_Naive1 L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 2.70e-02 -0.173 0.0778 0.348 B_Naive2 L2
ENSG00000079931 MOXD1 -376909 sc-eQTL 9.50e-01 0.0056 0.0892 0.348 B_Naive2 L2
ENSG00000079950 STX7 -488632 sc-eQTL 6.50e-01 -0.0221 0.0486 0.348 B_Naive2 L2
ENSG00000112282 MED23 396324 sc-eQTL 7.14e-01 0.033 0.0897 0.348 B_Naive2 L2
ENSG00000112303 VNN2 -738893 sc-eQTL 2.61e-01 -0.1 0.0889 0.348 B_Naive2 L2
ENSG00000112306 RPS12 -790003 sc-eQTL 3.43e-01 -0.0448 0.0471 0.348 B_Naive2 L2
ENSG00000118507 AKAP7 889099 sc-eQTL 2.63e-01 -0.105 0.094 0.348 B_Naive2 L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 9.69e-01 -0.00349 0.0901 0.348 B_Naive2 L2
ENSG00000228495 LINC01013 -107322 sc-eQTL 1.30e-01 -0.0945 0.0621 0.348 B_Naive2 L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 2.13e-01 -0.0929 0.0744 0.35 CD4_CTL L2
ENSG00000079950 STX7 -488632 sc-eQTL 6.24e-01 -0.0452 0.092 0.35 CD4_CTL L2
ENSG00000112282 MED23 396324 sc-eQTL 7.76e-01 -0.0273 0.0957 0.35 CD4_CTL L2
ENSG00000112303 VNN2 -738893 sc-eQTL 9.60e-01 -0.00467 0.0929 0.35 CD4_CTL L2
ENSG00000112306 RPS12 -790003 sc-eQTL 6.63e-01 -0.0187 0.0429 0.35 CD4_CTL L2
ENSG00000118507 AKAP7 889099 sc-eQTL 8.91e-01 -0.0125 0.0918 0.35 CD4_CTL L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 2.51e-01 0.0993 0.0862 0.35 CD4_CTL L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 8.79e-01 -0.0131 0.0859 0.346 CD4_Naive L2
ENSG00000079950 STX7 -488632 sc-eQTL 2.07e-01 -0.092 0.0726 0.346 CD4_Naive L2
ENSG00000112282 MED23 396324 sc-eQTL 6.53e-01 -0.028 0.0622 0.346 CD4_Naive L2
ENSG00000112303 VNN2 -738893 sc-eQTL 1.46e-01 0.098 0.0672 0.346 CD4_Naive L2
ENSG00000112306 RPS12 -790003 sc-eQTL 3.65e-01 -0.0397 0.0437 0.346 CD4_Naive L2
ENSG00000118507 AKAP7 889099 sc-eQTL 5.15e-02 0.158 0.0807 0.346 CD4_Naive L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 3.21e-01 0.0837 0.0841 0.346 CD4_Naive L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 1.29e-01 -0.135 0.0886 0.346 CD4_TCM L2
ENSG00000079950 STX7 -488632 sc-eQTL 9.89e-03 -0.208 0.0801 0.346 CD4_TCM L2
ENSG00000112282 MED23 396324 sc-eQTL 6.39e-01 0.0322 0.0684 0.346 CD4_TCM L2
ENSG00000112303 VNN2 -738893 sc-eQTL 8.78e-01 0.0123 0.0802 0.346 CD4_TCM L2
ENSG00000112306 RPS12 -790003 sc-eQTL 7.84e-01 -0.0114 0.0416 0.346 CD4_TCM L2
ENSG00000118507 AKAP7 889099 sc-eQTL 4.75e-01 0.0568 0.0793 0.346 CD4_TCM L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 6.98e-01 0.0373 0.0962 0.346 CD4_TCM L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 7.62e-02 0.162 0.0911 0.346 CD4_TEM L2
ENSG00000079950 STX7 -488632 sc-eQTL 2.26e-01 -0.111 0.0914 0.346 CD4_TEM L2
ENSG00000112282 MED23 396324 sc-eQTL 3.01e-01 0.0874 0.0843 0.346 CD4_TEM L2
ENSG00000112303 VNN2 -738893 sc-eQTL 2.99e-01 -0.0914 0.0878 0.346 CD4_TEM L2
ENSG00000112306 RPS12 -790003 sc-eQTL 9.40e-01 -0.00273 0.0361 0.346 CD4_TEM L2
ENSG00000118507 AKAP7 889099 sc-eQTL 4.30e-01 -0.0733 0.0927 0.346 CD4_TEM L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 7.29e-01 0.0311 0.0897 0.346 CD4_TEM L2
ENSG00000079950 STX7 -488632 sc-eQTL 5.46e-01 0.0451 0.0746 0.346 CD8_CTL L2
ENSG00000112282 MED23 396324 sc-eQTL 1.07e-01 -0.123 0.076 0.346 CD8_CTL L2
ENSG00000112303 VNN2 -738893 sc-eQTL 8.41e-01 0.017 0.0848 0.346 CD8_CTL L2
ENSG00000112306 RPS12 -790003 sc-eQTL 9.76e-01 0.00139 0.0454 0.346 CD8_CTL L2
ENSG00000118507 AKAP7 889099 sc-eQTL 9.07e-01 0.01 0.0856 0.346 CD8_CTL L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 8.55e-01 -0.016 0.0879 0.346 CD8_CTL L2
ENSG00000079950 STX7 -488632 sc-eQTL 4.74e-02 -0.185 0.0925 0.346 CD8_Naive L2
ENSG00000112282 MED23 396324 sc-eQTL 2.46e-01 0.0871 0.0749 0.346 CD8_Naive L2
ENSG00000112303 VNN2 -738893 sc-eQTL 1.27e-01 0.123 0.0801 0.346 CD8_Naive L2
ENSG00000112306 RPS12 -790003 sc-eQTL 4.32e-01 -0.0363 0.0461 0.346 CD8_Naive L2
ENSG00000118507 AKAP7 889099 sc-eQTL 8.56e-01 0.0154 0.0848 0.346 CD8_Naive L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 4.83e-01 0.065 0.0925 0.346 CD8_Naive L2
ENSG00000079950 STX7 -488632 sc-eQTL 8.36e-01 -0.0186 0.0895 0.345 CD8_TCM L2
ENSG00000112282 MED23 396324 sc-eQTL 3.36e-01 -0.0864 0.0896 0.345 CD8_TCM L2
ENSG00000112303 VNN2 -738893 sc-eQTL 2.10e-01 -0.111 0.0885 0.345 CD8_TCM L2
ENSG00000112306 RPS12 -790003 sc-eQTL 8.54e-01 -0.00799 0.0433 0.345 CD8_TCM L2
ENSG00000118507 AKAP7 889099 sc-eQTL 7.49e-01 -0.0309 0.0964 0.345 CD8_TCM L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 8.75e-01 0.015 0.0949 0.345 CD8_TCM L2
ENSG00000079950 STX7 -488632 sc-eQTL 7.55e-01 -0.0291 0.0932 0.342 CD8_TEM L2
ENSG00000112282 MED23 396324 sc-eQTL 8.32e-01 -0.019 0.0898 0.342 CD8_TEM L2
ENSG00000112303 VNN2 -738893 sc-eQTL 4.66e-01 -0.0676 0.0926 0.342 CD8_TEM L2
ENSG00000112306 RPS12 -790003 sc-eQTL 1.11e-02 -0.126 0.0491 0.342 CD8_TEM L2
ENSG00000118507 AKAP7 889099 sc-eQTL 6.57e-02 0.168 0.0905 0.342 CD8_TEM L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 6.86e-01 0.0381 0.0943 0.342 CD8_TEM L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 7.13e-01 -0.0304 0.0826 0.346 MAIT L2
ENSG00000079950 STX7 -488632 sc-eQTL 7.19e-01 -0.031 0.0861 0.346 MAIT L2
ENSG00000112282 MED23 396324 sc-eQTL 8.55e-01 0.0165 0.0901 0.346 MAIT L2
ENSG00000112303 VNN2 -738893 sc-eQTL 2.56e-02 0.194 0.0865 0.346 MAIT L2
ENSG00000112306 RPS12 -790003 sc-eQTL 6.16e-01 -0.0216 0.043 0.346 MAIT L2
ENSG00000118507 AKAP7 889099 sc-eQTL 5.81e-01 -0.0492 0.0889 0.346 MAIT L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 4.60e-01 -0.0668 0.0902 0.346 MAIT L2
ENSG00000079950 STX7 -488632 sc-eQTL 3.46e-01 -0.0843 0.0892 0.349 NK_CD56bright L2
ENSG00000112282 MED23 396324 sc-eQTL 7.37e-01 -0.0318 0.0945 0.349 NK_CD56bright L2
ENSG00000112303 VNN2 -738893 sc-eQTL 8.19e-01 0.0208 0.0908 0.349 NK_CD56bright L2
ENSG00000112306 RPS12 -790003 sc-eQTL 3.48e-01 -0.0475 0.0505 0.349 NK_CD56bright L2
ENSG00000118507 AKAP7 889099 sc-eQTL 2.00e-02 -0.212 0.0905 0.349 NK_CD56bright L2
ENSG00000079950 STX7 -488632 sc-eQTL 4.27e-01 -0.0571 0.0718 0.345 NK_CD56dim L2
ENSG00000112282 MED23 396324 sc-eQTL 1.49e-01 0.106 0.0735 0.345 NK_CD56dim L2
ENSG00000112303 VNN2 -738893 sc-eQTL 2.72e-01 -0.0987 0.0896 0.345 NK_CD56dim L2
ENSG00000112306 RPS12 -790003 sc-eQTL 5.20e-01 -0.023 0.0356 0.345 NK_CD56dim L2
ENSG00000118507 AKAP7 889099 sc-eQTL 5.80e-01 0.0434 0.0784 0.345 NK_CD56dim L2
ENSG00000079950 STX7 -488632 sc-eQTL 6.98e-02 -0.161 0.0883 0.347 NK_HLA L2
ENSG00000112282 MED23 396324 sc-eQTL 7.70e-01 0.0263 0.09 0.347 NK_HLA L2
ENSG00000112303 VNN2 -738893 sc-eQTL 5.41e-01 -0.0552 0.09 0.347 NK_HLA L2
ENSG00000112306 RPS12 -790003 sc-eQTL 6.11e-01 0.0214 0.042 0.347 NK_HLA L2
ENSG00000118507 AKAP7 889099 sc-eQTL 1.11e-01 0.148 0.0927 0.347 NK_HLA L2
ENSG00000079950 STX7 -488632 sc-eQTL 2.15e-01 -0.0961 0.0773 0.345 NK_cytokine L2
ENSG00000112282 MED23 396324 sc-eQTL 8.83e-01 0.0118 0.0802 0.345 NK_cytokine L2
ENSG00000112303 VNN2 -738893 sc-eQTL 3.13e-01 -0.088 0.087 0.345 NK_cytokine L2
ENSG00000112306 RPS12 -790003 sc-eQTL 7.25e-01 -0.0167 0.0473 0.345 NK_cytokine L2
ENSG00000118507 AKAP7 889099 sc-eQTL 8.60e-01 0.0143 0.081 0.345 NK_cytokine L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 2.89e-01 0.127 0.119 0.322 PB L2
ENSG00000079931 MOXD1 -376909 sc-eQTL 1.90e-02 0.231 0.0971 0.322 PB L2
ENSG00000079950 STX7 -488632 sc-eQTL 1.17e-01 0.13 0.0822 0.322 PB L2
ENSG00000112282 MED23 396324 sc-eQTL 9.54e-01 0.00657 0.113 0.322 PB L2
ENSG00000112303 VNN2 -738893 sc-eQTL 5.46e-01 0.0614 0.101 0.322 PB L2
ENSG00000112306 RPS12 -790003 sc-eQTL 7.23e-02 -0.103 0.0568 0.322 PB L2
ENSG00000118507 AKAP7 889099 sc-eQTL 6.18e-01 -0.055 0.11 0.322 PB L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 6.96e-01 0.0423 0.108 0.322 PB L2
ENSG00000228495 LINC01013 -107322 sc-eQTL 8.96e-01 -0.00928 0.071 0.322 PB L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 5.04e-01 0.0539 0.0804 0.343 Pro_T L2
ENSG00000079950 STX7 -488632 sc-eQTL 4.21e-01 0.067 0.0831 0.343 Pro_T L2
ENSG00000112282 MED23 396324 sc-eQTL 9.71e-01 -0.00345 0.0936 0.343 Pro_T L2
ENSG00000112303 VNN2 -738893 sc-eQTL 6.04e-01 0.0464 0.0892 0.343 Pro_T L2
ENSG00000112306 RPS12 -790003 sc-eQTL 7.31e-01 0.0116 0.0338 0.343 Pro_T L2
ENSG00000118507 AKAP7 889099 sc-eQTL 5.90e-01 0.0433 0.0802 0.343 Pro_T L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 7.83e-01 -0.0241 0.0874 0.343 Pro_T L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 7.41e-01 -0.0291 0.0878 0.346 Treg L2
ENSG00000079950 STX7 -488632 sc-eQTL 9.96e-01 0.00043 0.0879 0.346 Treg L2
ENSG00000112282 MED23 396324 sc-eQTL 9.36e-01 0.00728 0.0904 0.346 Treg L2
ENSG00000112303 VNN2 -738893 sc-eQTL 2.32e-01 0.0884 0.0737 0.346 Treg L2
ENSG00000112306 RPS12 -790003 sc-eQTL 8.30e-01 0.00702 0.0327 0.346 Treg L2
ENSG00000118507 AKAP7 889099 sc-eQTL 4.69e-01 0.0564 0.0778 0.346 Treg L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 1.56e-01 0.131 0.092 0.346 Treg L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 9.81e-01 0.00184 0.0768 0.361 cDC L2
ENSG00000079950 STX7 -488632 sc-eQTL 5.98e-01 0.0404 0.0764 0.361 cDC L2
ENSG00000093134 VNN3 -710199 sc-eQTL 1.55e-01 0.108 0.0755 0.361 cDC L2
ENSG00000112282 MED23 396324 sc-eQTL 6.15e-01 0.0497 0.0987 0.361 cDC L2
ENSG00000112299 VNN1 -689489 sc-eQTL 6.09e-01 0.0457 0.0892 0.361 cDC L2
ENSG00000112303 VNN2 -738893 sc-eQTL 8.82e-01 0.0129 0.087 0.361 cDC L2
ENSG00000112306 RPS12 -790003 sc-eQTL 3.70e-01 -0.0385 0.0428 0.361 cDC L2
ENSG00000118507 AKAP7 889099 sc-eQTL 2.13e-02 -0.219 0.0944 0.361 cDC L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 7.49e-01 -0.0273 0.085 0.361 cDC L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 2.78e-01 0.0891 0.0819 0.346 cMono_IL1B L2
ENSG00000079950 STX7 -488632 sc-eQTL 8.01e-01 0.0146 0.0578 0.346 cMono_IL1B L2
ENSG00000093134 VNN3 -710199 sc-eQTL 6.77e-01 -0.034 0.0816 0.346 cMono_IL1B L2
ENSG00000112282 MED23 396324 sc-eQTL 4.16e-01 0.0656 0.0806 0.346 cMono_IL1B L2
ENSG00000112299 VNN1 -689489 sc-eQTL 2.21e-01 0.101 0.0821 0.346 cMono_IL1B L2
ENSG00000112303 VNN2 -738893 sc-eQTL 6.89e-01 -0.0264 0.0659 0.346 cMono_IL1B L2
ENSG00000112306 RPS12 -790003 sc-eQTL 6.47e-01 -0.0168 0.0366 0.346 cMono_IL1B L2
ENSG00000118507 AKAP7 889099 sc-eQTL 5.60e-01 0.0458 0.0786 0.346 cMono_IL1B L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 3.71e-01 -0.0632 0.0705 0.346 cMono_IL1B L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 3.23e-01 0.0859 0.0866 0.346 cMono_S100A L2
ENSG00000079950 STX7 -488632 sc-eQTL 4.60e-01 -0.0471 0.0635 0.346 cMono_S100A L2
ENSG00000093134 VNN3 -710199 sc-eQTL 5.08e-01 0.0526 0.0794 0.346 cMono_S100A L2
ENSG00000112282 MED23 396324 sc-eQTL 6.26e-01 0.042 0.0862 0.346 cMono_S100A L2
ENSG00000112299 VNN1 -689489 sc-eQTL 6.27e-02 0.16 0.0855 0.346 cMono_S100A L2
ENSG00000112303 VNN2 -738893 sc-eQTL 7.05e-01 0.0214 0.0565 0.346 cMono_S100A L2
ENSG00000112306 RPS12 -790003 sc-eQTL 7.23e-01 -0.0144 0.0407 0.346 cMono_S100A L2
ENSG00000118507 AKAP7 889099 sc-eQTL 6.37e-01 -0.0399 0.0844 0.346 cMono_S100A L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 8.07e-01 -0.0185 0.0753 0.346 cMono_S100A L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 5.65e-01 -0.0551 0.0956 0.379 gdT L2
ENSG00000079950 STX7 -488632 sc-eQTL 2.00e-01 -0.128 0.0997 0.379 gdT L2
ENSG00000112282 MED23 396324 sc-eQTL 8.26e-01 -0.0237 0.108 0.379 gdT L2
ENSG00000112303 VNN2 -738893 sc-eQTL 2.75e-01 0.121 0.11 0.379 gdT L2
ENSG00000112306 RPS12 -790003 sc-eQTL 9.32e-01 0.00364 0.0423 0.379 gdT L2
ENSG00000118507 AKAP7 889099 sc-eQTL 9.50e-01 0.00701 0.112 0.379 gdT L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 5.91e-01 -0.0587 0.109 0.379 gdT L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 1.32e-01 0.133 0.0881 0.344 intMono L2
ENSG00000079950 STX7 -488632 sc-eQTL 4.24e-01 -0.0688 0.0859 0.344 intMono L2
ENSG00000093134 VNN3 -710199 sc-eQTL 7.56e-01 0.027 0.0869 0.344 intMono L2
ENSG00000112282 MED23 396324 sc-eQTL 1.93e-01 -0.124 0.095 0.344 intMono L2
ENSG00000112299 VNN1 -689489 sc-eQTL 8.14e-03 0.226 0.0844 0.344 intMono L2
ENSG00000112303 VNN2 -738893 sc-eQTL 7.50e-01 -0.0279 0.0873 0.344 intMono L2
ENSG00000112306 RPS12 -790003 sc-eQTL 4.38e-01 -0.0295 0.0379 0.344 intMono L2
ENSG00000118507 AKAP7 889099 sc-eQTL 8.09e-01 -0.0225 0.0931 0.344 intMono L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 5.24e-01 -0.059 0.0924 0.344 intMono L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 5.56e-01 0.0485 0.0822 0.355 ncMono L2
ENSG00000079950 STX7 -488632 sc-eQTL 3.57e-01 -0.0577 0.0625 0.355 ncMono L2
ENSG00000093134 VNN3 -710199 sc-eQTL 2.39e-01 0.104 0.0881 0.355 ncMono L2
ENSG00000112282 MED23 396324 sc-eQTL 8.57e-01 -0.0162 0.0896 0.355 ncMono L2
ENSG00000112299 VNN1 -689489 sc-eQTL 6.98e-01 0.0341 0.0878 0.355 ncMono L2
ENSG00000112303 VNN2 -738893 sc-eQTL 7.09e-01 -0.0316 0.0844 0.355 ncMono L2
ENSG00000112306 RPS12 -790003 sc-eQTL 1.50e-02 -0.102 0.0417 0.355 ncMono L2
ENSG00000118507 AKAP7 889099 sc-eQTL 5.44e-01 -0.0528 0.0868 0.355 ncMono L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 5.22e-01 0.0479 0.0747 0.355 ncMono L2
ENSG00000079819 EPB41L2 961244 sc-eQTL 6.02e-01 0.0526 0.101 0.39 pDC L2
ENSG00000079950 STX7 -488632 sc-eQTL 6.74e-01 0.0305 0.0725 0.39 pDC L2
ENSG00000093134 VNN3 -710199 sc-eQTL 9.32e-01 0.00628 0.073 0.39 pDC L2
ENSG00000112282 MED23 396324 sc-eQTL 4.41e-01 0.0785 0.102 0.39 pDC L2
ENSG00000112299 VNN1 -689489 sc-eQTL 4.88e-01 0.0516 0.0742 0.39 pDC L2
ENSG00000112303 VNN2 -738893 sc-eQTL 8.42e-01 0.0177 0.0885 0.39 pDC L2
ENSG00000112306 RPS12 -790003 sc-eQTL 7.86e-02 -0.107 0.0603 0.39 pDC L2
ENSG00000118507 AKAP7 889099 sc-eQTL 6.17e-01 0.0416 0.0831 0.39 pDC L2
ENSG00000146409 SLC18B1 -788773 sc-eQTL 9.46e-01 0.00609 0.0902 0.39 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 961244 sc-eQTL 6.44e-03 -0.214 0.0777 0.346 B_Memory LOneK1K
ENSG00000079931 MOXD1 -376909 sc-eQTL 5.95e-01 0.0477 0.0896 0.346 B_Memory LOneK1K
ENSG00000079950 STX7 -488632 sc-eQTL 3.39e-01 -0.0486 0.0507 0.346 B_Memory LOneK1K
ENSG00000112282 MED23 396324 sc-eQTL 1.38e-03 -0.246 0.0759 0.346 B_Memory LOneK1K
ENSG00000112303 VNN2 -738893 sc-eQTL 9.75e-01 0.00253 0.0803 0.346 B_Memory LOneK1K
ENSG00000112306 RPS12 -790003 sc-eQTL 3.41e-01 -0.0436 0.0457 0.346 B_Memory LOneK1K
ENSG00000118507 AKAP7 889099 sc-eQTL 1.23e-01 0.122 0.0786 0.346 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -788773 sc-eQTL 4.34e-01 -0.0657 0.0839 0.346 B_Memory LOneK1K
ENSG00000228495 LINC01013 -107322 sc-eQTL 2.65e-01 0.0903 0.0808 0.346 B_Memory LOneK1K
ENSG00000079819 EPB41L2 961244 sc-eQTL 7.63e-03 -0.176 0.0653 0.346 B_Naive LOneK1K
ENSG00000079931 MOXD1 -376909 sc-eQTL 6.07e-01 -0.0491 0.0953 0.346 B_Naive LOneK1K
ENSG00000079950 STX7 -488632 sc-eQTL 3.55e-01 -0.0362 0.0391 0.346 B_Naive LOneK1K
ENSG00000112282 MED23 396324 sc-eQTL 2.40e-02 -0.165 0.0726 0.346 B_Naive LOneK1K
ENSG00000112303 VNN2 -738893 sc-eQTL 6.01e-01 -0.0398 0.076 0.346 B_Naive LOneK1K
ENSG00000112306 RPS12 -790003 sc-eQTL 1.02e-01 -0.075 0.0457 0.346 B_Naive LOneK1K
ENSG00000118507 AKAP7 889099 sc-eQTL 5.08e-01 -0.0614 0.0925 0.346 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -788773 sc-eQTL 2.51e-01 -0.0996 0.0865 0.346 B_Naive LOneK1K
ENSG00000228495 LINC01013 -107322 sc-eQTL 1.13e-01 -0.0872 0.0548 0.346 B_Naive LOneK1K
ENSG00000079819 EPB41L2 961244 sc-eQTL 2.64e-01 0.088 0.0786 0.346 CD14_Mono LOneK1K
ENSG00000079950 STX7 -488632 sc-eQTL 9.33e-01 -0.00409 0.0485 0.346 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -710199 sc-eQTL 8.76e-01 -0.0123 0.079 0.346 CD14_Mono LOneK1K
ENSG00000112282 MED23 396324 sc-eQTL 3.25e-01 0.0747 0.0758 0.346 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -689489 sc-eQTL 1.88e-01 0.109 0.0821 0.346 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -738893 sc-eQTL 6.56e-01 -0.0243 0.0545 0.346 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -790003 sc-eQTL 3.60e-01 -0.0342 0.0373 0.346 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 889099 sc-eQTL 8.59e-01 -0.0132 0.0746 0.346 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -788773 sc-eQTL 3.92e-01 -0.0569 0.0664 0.346 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 961244 sc-eQTL 3.19e-01 0.0841 0.0842 0.347 CD16_Mono LOneK1K
ENSG00000079950 STX7 -488632 sc-eQTL 2.74e-01 -0.0656 0.0597 0.347 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -710199 sc-eQTL 9.16e-02 0.148 0.0875 0.347 CD16_Mono LOneK1K
ENSG00000112282 MED23 396324 sc-eQTL 7.47e-01 -0.0277 0.0858 0.347 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -689489 sc-eQTL 2.47e-01 0.101 0.087 0.347 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -738893 sc-eQTL 3.65e-01 -0.0747 0.0822 0.347 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -790003 sc-eQTL 1.60e-01 -0.049 0.0348 0.347 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 889099 sc-eQTL 9.32e-01 0.00749 0.0881 0.347 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -788773 sc-eQTL 9.69e-01 0.00326 0.0848 0.347 CD16_Mono LOneK1K
ENSG00000079950 STX7 -488632 sc-eQTL 1.81e-01 -0.0907 0.0676 0.345 NK_CD56dim LOneK1K
ENSG00000112282 MED23 396324 sc-eQTL 2.50e-01 0.0758 0.0657 0.345 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -738893 sc-eQTL 3.00e-01 -0.0891 0.0857 0.345 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -790003 sc-eQTL 8.29e-01 -0.00758 0.0351 0.345 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 889099 sc-eQTL 4.35e-01 0.0568 0.0726 0.345 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000118507 AKAP7 889099 eQTL 0.0243 0.0485 0.0215 0.0 0.0 0.289
ENSG00000118523 CCN2 73194 pQTL 5.09e-10 0.136 0.0218 0.0 0.0 0.293

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina