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Genes within 1Mb (chr6:131988998:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 925676 sc-eQTL 1.27e-01 -0.0991 0.0647 0.65 B L1
ENSG00000079931 MOXD1 -412477 sc-eQTL 2.32e-01 -0.114 0.0946 0.65 B L1
ENSG00000079950 STX7 -524200 sc-eQTL 2.10e-01 0.0449 0.0357 0.65 B L1
ENSG00000112282 MED23 360756 sc-eQTL 4.47e-02 -0.143 0.0707 0.65 B L1
ENSG00000112303 VNN2 -774461 sc-eQTL 8.04e-01 -0.0167 0.0673 0.65 B L1
ENSG00000112306 RPS12 -825571 sc-eQTL 5.19e-02 -0.0788 0.0403 0.65 B L1
ENSG00000118507 AKAP7 853531 sc-eQTL 1.45e-01 -0.123 0.0841 0.65 B L1
ENSG00000146409 SLC18B1 -824341 sc-eQTL 3.97e-01 -0.0725 0.0855 0.65 B L1
ENSG00000228495 LINC01013 -142890 sc-eQTL 7.11e-11 -0.349 0.0508 0.65 B L1
ENSG00000079819 EPB41L2 925676 sc-eQTL 2.31e-01 -0.102 0.085 0.65 CD4T L1
ENSG00000079950 STX7 -524200 sc-eQTL 8.73e-01 0.0112 0.0696 0.65 CD4T L1
ENSG00000112282 MED23 360756 sc-eQTL 6.50e-01 0.0251 0.0552 0.65 CD4T L1
ENSG00000112303 VNN2 -774461 sc-eQTL 6.63e-01 0.0263 0.0602 0.65 CD4T L1
ENSG00000112306 RPS12 -825571 sc-eQTL 8.40e-01 -0.00827 0.041 0.65 CD4T L1
ENSG00000118507 AKAP7 853531 sc-eQTL 8.96e-01 -0.00968 0.0741 0.65 CD4T L1
ENSG00000146409 SLC18B1 -824341 sc-eQTL 4.10e-01 0.0682 0.0827 0.65 CD4T L1
ENSG00000079950 STX7 -524200 sc-eQTL 5.73e-01 0.0389 0.0688 0.65 CD8T L1
ENSG00000112282 MED23 360756 sc-eQTL 3.06e-01 0.0694 0.0676 0.65 CD8T L1
ENSG00000112303 VNN2 -774461 sc-eQTL 9.78e-01 -0.00223 0.0804 0.65 CD8T L1
ENSG00000112306 RPS12 -825571 sc-eQTL 3.80e-01 -0.0241 0.0274 0.65 CD8T L1
ENSG00000118507 AKAP7 853531 sc-eQTL 7.48e-01 -0.0248 0.0772 0.65 CD8T L1
ENSG00000146409 SLC18B1 -824341 sc-eQTL 7.06e-01 -0.0314 0.083 0.65 CD8T L1
ENSG00000079819 EPB41L2 925676 sc-eQTL 5.53e-02 0.135 0.0701 0.66 DC L1
ENSG00000079950 STX7 -524200 sc-eQTL 3.32e-01 0.0606 0.0623 0.66 DC L1
ENSG00000093134 VNN3 -745767 sc-eQTL 9.80e-01 -0.00195 0.0774 0.66 DC L1
ENSG00000112282 MED23 360756 sc-eQTL 1.51e-01 0.13 0.0904 0.66 DC L1
ENSG00000112299 VNN1 -725057 sc-eQTL 8.04e-01 0.0208 0.0836 0.66 DC L1
ENSG00000112303 VNN2 -774461 sc-eQTL 6.86e-01 -0.0361 0.0894 0.66 DC L1
ENSG00000112306 RPS12 -825571 sc-eQTL 1.32e-01 -0.0753 0.0498 0.66 DC L1
ENSG00000118507 AKAP7 853531 sc-eQTL 4.66e-01 0.0652 0.0893 0.66 DC L1
ENSG00000146409 SLC18B1 -824341 sc-eQTL 6.44e-01 -0.0367 0.0793 0.66 DC L1
ENSG00000079819 EPB41L2 925676 sc-eQTL 6.10e-01 0.04 0.0783 0.65 Mono L1
ENSG00000079950 STX7 -524200 sc-eQTL 4.32e-01 0.0367 0.0466 0.65 Mono L1
ENSG00000093134 VNN3 -745767 sc-eQTL 4.67e-01 -0.0583 0.08 0.65 Mono L1
ENSG00000112282 MED23 360756 sc-eQTL 3.31e-02 0.162 0.0753 0.65 Mono L1
ENSG00000112299 VNN1 -725057 sc-eQTL 8.25e-01 0.0191 0.0862 0.65 Mono L1
ENSG00000112303 VNN2 -774461 sc-eQTL 4.90e-01 -0.042 0.0608 0.65 Mono L1
ENSG00000112306 RPS12 -825571 sc-eQTL 6.56e-01 0.0163 0.0364 0.65 Mono L1
ENSG00000118507 AKAP7 853531 sc-eQTL 9.43e-01 -0.00536 0.0756 0.65 Mono L1
ENSG00000146409 SLC18B1 -824341 sc-eQTL 2.46e-01 -0.0837 0.0719 0.65 Mono L1
ENSG00000079950 STX7 -524200 sc-eQTL 6.17e-01 0.0353 0.0706 0.65 NK L1
ENSG00000112282 MED23 360756 sc-eQTL 5.76e-01 0.0362 0.0645 0.65 NK L1
ENSG00000112303 VNN2 -774461 sc-eQTL 6.53e-01 -0.0396 0.0879 0.65 NK L1
ENSG00000112306 RPS12 -825571 sc-eQTL 4.80e-01 0.0257 0.0363 0.65 NK L1
ENSG00000118507 AKAP7 853531 sc-eQTL 6.05e-01 0.04 0.0773 0.65 NK L1
ENSG00000079819 EPB41L2 925676 sc-eQTL 6.13e-01 0.0398 0.0785 0.65 Other_T L1
ENSG00000079950 STX7 -524200 sc-eQTL 5.68e-01 0.0406 0.071 0.65 Other_T L1
ENSG00000112282 MED23 360756 sc-eQTL 7.91e-01 -0.0235 0.0887 0.65 Other_T L1
ENSG00000112303 VNN2 -774461 sc-eQTL 4.59e-01 -0.0637 0.0858 0.65 Other_T L1
ENSG00000112306 RPS12 -825571 sc-eQTL 7.32e-01 0.0117 0.0341 0.65 Other_T L1
ENSG00000118507 AKAP7 853531 sc-eQTL 5.35e-01 0.0481 0.0775 0.65 Other_T L1
ENSG00000146409 SLC18B1 -824341 sc-eQTL 9.18e-01 -0.00957 0.0933 0.65 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 925676 sc-eQTL 4.92e-01 -0.058 0.0842 0.651 B_Activated L2
ENSG00000079931 MOXD1 -412477 sc-eQTL 9.76e-01 -0.00283 0.0957 0.651 B_Activated L2
ENSG00000079950 STX7 -524200 sc-eQTL 4.64e-01 0.0658 0.0896 0.651 B_Activated L2
ENSG00000112282 MED23 360756 sc-eQTL 5.81e-01 -0.0549 0.0993 0.651 B_Activated L2
ENSG00000112303 VNN2 -774461 sc-eQTL 2.53e-01 0.109 0.0951 0.651 B_Activated L2
ENSG00000112306 RPS12 -825571 sc-eQTL 9.62e-01 0.00242 0.0512 0.651 B_Activated L2
ENSG00000118507 AKAP7 853531 sc-eQTL 7.98e-01 0.0253 0.0991 0.651 B_Activated L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 3.18e-01 -0.0894 0.0894 0.651 B_Activated L2
ENSG00000228495 LINC01013 -142890 sc-eQTL 6.61e-02 -0.157 0.0846 0.651 B_Activated L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 3.81e-01 -0.0788 0.0898 0.648 B_Intermediate L2
ENSG00000079931 MOXD1 -412477 sc-eQTL 7.50e-01 -0.0277 0.087 0.648 B_Intermediate L2
ENSG00000079950 STX7 -524200 sc-eQTL 8.54e-01 -0.0105 0.057 0.648 B_Intermediate L2
ENSG00000112282 MED23 360756 sc-eQTL 9.86e-01 -0.00147 0.0866 0.648 B_Intermediate L2
ENSG00000112303 VNN2 -774461 sc-eQTL 6.22e-01 -0.0423 0.0857 0.648 B_Intermediate L2
ENSG00000112306 RPS12 -825571 sc-eQTL 4.62e-01 -0.0386 0.0525 0.648 B_Intermediate L2
ENSG00000118507 AKAP7 853531 sc-eQTL 5.23e-01 -0.0563 0.088 0.648 B_Intermediate L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 8.45e-01 0.0185 0.0946 0.648 B_Intermediate L2
ENSG00000228495 LINC01013 -142890 sc-eQTL 4.63e-02 -0.16 0.0797 0.648 B_Intermediate L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 8.07e-01 -0.0208 0.085 0.651 B_Memory L2
ENSG00000079931 MOXD1 -412477 sc-eQTL 9.41e-01 -0.00654 0.0882 0.651 B_Memory L2
ENSG00000079950 STX7 -524200 sc-eQTL 8.55e-02 0.119 0.0687 0.651 B_Memory L2
ENSG00000112282 MED23 360756 sc-eQTL 5.62e-02 -0.17 0.0883 0.651 B_Memory L2
ENSG00000112303 VNN2 -774461 sc-eQTL 5.04e-01 -0.0606 0.0904 0.651 B_Memory L2
ENSG00000112306 RPS12 -825571 sc-eQTL 5.39e-01 -0.0268 0.0436 0.651 B_Memory L2
ENSG00000118507 AKAP7 853531 sc-eQTL 6.34e-01 0.0442 0.0927 0.651 B_Memory L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 3.85e-01 0.0791 0.0908 0.651 B_Memory L2
ENSG00000228495 LINC01013 -142890 sc-eQTL 8.82e-02 -0.144 0.0842 0.651 B_Memory L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 6.11e-01 0.0373 0.0733 0.65 B_Naive1 L2
ENSG00000079931 MOXD1 -412477 sc-eQTL 2.19e-01 -0.122 0.0993 0.65 B_Naive1 L2
ENSG00000079950 STX7 -524200 sc-eQTL 1.63e-01 0.0607 0.0434 0.65 B_Naive1 L2
ENSG00000112282 MED23 360756 sc-eQTL 9.76e-02 -0.129 0.0775 0.65 B_Naive1 L2
ENSG00000112303 VNN2 -774461 sc-eQTL 4.53e-01 0.0635 0.0845 0.65 B_Naive1 L2
ENSG00000112306 RPS12 -825571 sc-eQTL 1.16e-01 -0.0756 0.0479 0.65 B_Naive1 L2
ENSG00000118507 AKAP7 853531 sc-eQTL 5.04e-01 -0.0653 0.0976 0.65 B_Naive1 L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 1.65e-01 -0.129 0.0926 0.65 B_Naive1 L2
ENSG00000228495 LINC01013 -142890 sc-eQTL 8.72e-08 -0.319 0.0575 0.65 B_Naive1 L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 5.44e-01 -0.0503 0.0827 0.65 B_Naive2 L2
ENSG00000079931 MOXD1 -412477 sc-eQTL 8.12e-01 -0.0224 0.0938 0.65 B_Naive2 L2
ENSG00000079950 STX7 -524200 sc-eQTL 4.58e-01 0.038 0.051 0.65 B_Naive2 L2
ENSG00000112282 MED23 360756 sc-eQTL 6.13e-01 -0.0477 0.0943 0.65 B_Naive2 L2
ENSG00000112303 VNN2 -774461 sc-eQTL 7.72e-01 0.0272 0.0938 0.65 B_Naive2 L2
ENSG00000112306 RPS12 -825571 sc-eQTL 1.13e-01 -0.0787 0.0494 0.65 B_Naive2 L2
ENSG00000118507 AKAP7 853531 sc-eQTL 4.12e-02 -0.202 0.0982 0.65 B_Naive2 L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 5.68e-01 -0.0542 0.0947 0.65 B_Naive2 L2
ENSG00000228495 LINC01013 -142890 sc-eQTL 3.86e-06 -0.296 0.0624 0.65 B_Naive2 L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 6.71e-01 -0.0315 0.0739 0.65 CD4_CTL L2
ENSG00000079950 STX7 -524200 sc-eQTL 8.85e-01 -0.0132 0.0912 0.65 CD4_CTL L2
ENSG00000112282 MED23 360756 sc-eQTL 1.80e-01 -0.127 0.0944 0.65 CD4_CTL L2
ENSG00000112303 VNN2 -774461 sc-eQTL 5.77e-01 0.0514 0.0919 0.65 CD4_CTL L2
ENSG00000112306 RPS12 -825571 sc-eQTL 2.15e-01 -0.0526 0.0423 0.65 CD4_CTL L2
ENSG00000118507 AKAP7 853531 sc-eQTL 7.84e-01 0.0249 0.0909 0.65 CD4_CTL L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 3.37e-01 0.0822 0.0855 0.65 CD4_CTL L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 4.85e-01 -0.0625 0.0893 0.65 CD4_Naive L2
ENSG00000079950 STX7 -524200 sc-eQTL 3.03e-01 0.0783 0.0758 0.65 CD4_Naive L2
ENSG00000112282 MED23 360756 sc-eQTL 3.35e-01 0.0625 0.0647 0.65 CD4_Naive L2
ENSG00000112303 VNN2 -774461 sc-eQTL 4.87e-01 0.049 0.0703 0.65 CD4_Naive L2
ENSG00000112306 RPS12 -825571 sc-eQTL 9.58e-01 0.00243 0.0456 0.65 CD4_Naive L2
ENSG00000118507 AKAP7 853531 sc-eQTL 3.49e-01 -0.0794 0.0846 0.65 CD4_Naive L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 9.40e-01 -0.00661 0.0878 0.65 CD4_Naive L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 1.49e-01 -0.129 0.0892 0.65 CD4_TCM L2
ENSG00000079950 STX7 -524200 sc-eQTL 9.38e-01 -0.0064 0.0819 0.65 CD4_TCM L2
ENSG00000112282 MED23 360756 sc-eQTL 4.57e-01 -0.0512 0.0688 0.65 CD4_TCM L2
ENSG00000112303 VNN2 -774461 sc-eQTL 1.24e-01 -0.124 0.0803 0.65 CD4_TCM L2
ENSG00000112306 RPS12 -825571 sc-eQTL 3.58e-01 -0.0385 0.0418 0.65 CD4_TCM L2
ENSG00000118507 AKAP7 853531 sc-eQTL 1.57e-01 0.113 0.0795 0.65 CD4_TCM L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 4.45e-01 0.074 0.0968 0.65 CD4_TCM L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 3.49e-01 0.0884 0.0942 0.65 CD4_TEM L2
ENSG00000079950 STX7 -524200 sc-eQTL 9.22e-01 -0.00924 0.0944 0.65 CD4_TEM L2
ENSG00000112282 MED23 360756 sc-eQTL 3.47e-01 -0.0818 0.0868 0.65 CD4_TEM L2
ENSG00000112303 VNN2 -774461 sc-eQTL 7.83e-01 0.025 0.0906 0.65 CD4_TEM L2
ENSG00000112306 RPS12 -825571 sc-eQTL 7.57e-01 0.0115 0.0372 0.65 CD4_TEM L2
ENSG00000118507 AKAP7 853531 sc-eQTL 2.18e-01 -0.118 0.0952 0.65 CD4_TEM L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 1.16e-01 0.145 0.0918 0.65 CD4_TEM L2
ENSG00000079950 STX7 -524200 sc-eQTL 9.97e-01 -0.000339 0.0792 0.65 CD8_CTL L2
ENSG00000112282 MED23 360756 sc-eQTL 6.84e-01 -0.0331 0.0811 0.65 CD8_CTL L2
ENSG00000112303 VNN2 -774461 sc-eQTL 8.03e-01 -0.0224 0.09 0.65 CD8_CTL L2
ENSG00000112306 RPS12 -825571 sc-eQTL 2.50e-01 0.0554 0.048 0.65 CD8_CTL L2
ENSG00000118507 AKAP7 853531 sc-eQTL 6.67e-01 0.039 0.0908 0.65 CD8_CTL L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 1.83e-01 0.124 0.0929 0.65 CD8_CTL L2
ENSG00000079950 STX7 -524200 sc-eQTL 1.89e-01 0.125 0.0945 0.65 CD8_Naive L2
ENSG00000112282 MED23 360756 sc-eQTL 3.85e-01 0.0663 0.0762 0.65 CD8_Naive L2
ENSG00000112303 VNN2 -774461 sc-eQTL 3.71e-01 0.0733 0.0817 0.65 CD8_Naive L2
ENSG00000112306 RPS12 -825571 sc-eQTL 4.38e-01 -0.0364 0.0468 0.65 CD8_Naive L2
ENSG00000118507 AKAP7 853531 sc-eQTL 1.73e-01 -0.117 0.0858 0.65 CD8_Naive L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 3.25e-01 -0.0927 0.0939 0.65 CD8_Naive L2
ENSG00000079950 STX7 -524200 sc-eQTL 5.84e-01 0.0508 0.0927 0.648 CD8_TCM L2
ENSG00000112282 MED23 360756 sc-eQTL 4.98e-01 -0.0631 0.093 0.648 CD8_TCM L2
ENSG00000112303 VNN2 -774461 sc-eQTL 2.06e-01 -0.116 0.0917 0.648 CD8_TCM L2
ENSG00000112306 RPS12 -825571 sc-eQTL 6.70e-01 -0.0191 0.0448 0.648 CD8_TCM L2
ENSG00000118507 AKAP7 853531 sc-eQTL 8.98e-01 -0.0128 0.0999 0.648 CD8_TCM L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 9.26e-01 -0.00918 0.0983 0.648 CD8_TCM L2
ENSG00000079950 STX7 -524200 sc-eQTL 5.30e-01 -0.0621 0.0987 0.646 CD8_TEM L2
ENSG00000112282 MED23 360756 sc-eQTL 7.39e-01 0.0317 0.0951 0.646 CD8_TEM L2
ENSG00000112303 VNN2 -774461 sc-eQTL 2.54e-01 -0.112 0.0979 0.646 CD8_TEM L2
ENSG00000112306 RPS12 -825571 sc-eQTL 8.91e-01 -0.00722 0.0529 0.646 CD8_TEM L2
ENSG00000118507 AKAP7 853531 sc-eQTL 9.19e-01 0.0099 0.0967 0.646 CD8_TEM L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 4.05e-01 -0.0832 0.0998 0.646 CD8_TEM L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 7.18e-01 -0.0309 0.0853 0.649 MAIT L2
ENSG00000079950 STX7 -524200 sc-eQTL 3.59e-01 0.0816 0.0887 0.649 MAIT L2
ENSG00000112282 MED23 360756 sc-eQTL 9.94e-01 0.000657 0.093 0.649 MAIT L2
ENSG00000112303 VNN2 -774461 sc-eQTL 4.44e-01 0.0692 0.0903 0.649 MAIT L2
ENSG00000112306 RPS12 -825571 sc-eQTL 3.82e-01 -0.0389 0.0444 0.649 MAIT L2
ENSG00000118507 AKAP7 853531 sc-eQTL 6.19e-01 0.0457 0.0918 0.649 MAIT L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 8.75e-01 0.0147 0.0932 0.649 MAIT L2
ENSG00000079950 STX7 -524200 sc-eQTL 9.35e-01 -0.00764 0.0936 0.656 NK_CD56bright L2
ENSG00000112282 MED23 360756 sc-eQTL 4.11e-01 -0.0815 0.0989 0.656 NK_CD56bright L2
ENSG00000112303 VNN2 -774461 sc-eQTL 9.80e-01 0.00233 0.0951 0.656 NK_CD56bright L2
ENSG00000112306 RPS12 -825571 sc-eQTL 3.03e-01 0.0546 0.0528 0.656 NK_CD56bright L2
ENSG00000118507 AKAP7 853531 sc-eQTL 1.17e-01 -0.15 0.0954 0.656 NK_CD56bright L2
ENSG00000079950 STX7 -524200 sc-eQTL 4.19e-01 0.0605 0.0747 0.649 NK_CD56dim L2
ENSG00000112282 MED23 360756 sc-eQTL 2.77e-01 0.0835 0.0767 0.649 NK_CD56dim L2
ENSG00000112303 VNN2 -774461 sc-eQTL 8.14e-02 -0.163 0.0929 0.649 NK_CD56dim L2
ENSG00000112306 RPS12 -825571 sc-eQTL 9.01e-01 0.00461 0.0371 0.649 NK_CD56dim L2
ENSG00000118507 AKAP7 853531 sc-eQTL 4.56e-01 0.0609 0.0815 0.649 NK_CD56dim L2
ENSG00000079950 STX7 -524200 sc-eQTL 4.99e-01 -0.0628 0.0927 0.658 NK_HLA L2
ENSG00000112282 MED23 360756 sc-eQTL 4.51e-01 0.0706 0.0936 0.658 NK_HLA L2
ENSG00000112303 VNN2 -774461 sc-eQTL 2.51e-01 -0.108 0.0936 0.658 NK_HLA L2
ENSG00000112306 RPS12 -825571 sc-eQTL 3.77e-01 0.0387 0.0437 0.658 NK_HLA L2
ENSG00000118507 AKAP7 853531 sc-eQTL 3.33e-01 0.0941 0.0969 0.658 NK_HLA L2
ENSG00000079950 STX7 -524200 sc-eQTL 8.16e-01 0.019 0.0816 0.649 NK_cytokine L2
ENSG00000112282 MED23 360756 sc-eQTL 6.57e-01 -0.0376 0.0844 0.649 NK_cytokine L2
ENSG00000112303 VNN2 -774461 sc-eQTL 4.93e-01 0.0629 0.0917 0.649 NK_cytokine L2
ENSG00000112306 RPS12 -825571 sc-eQTL 6.96e-01 0.0195 0.0498 0.649 NK_cytokine L2
ENSG00000118507 AKAP7 853531 sc-eQTL 4.39e-01 0.0661 0.0851 0.649 NK_cytokine L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 6.08e-01 0.0662 0.129 0.619 PB L2
ENSG00000079931 MOXD1 -412477 sc-eQTL 8.74e-01 0.017 0.107 0.619 PB L2
ENSG00000079950 STX7 -524200 sc-eQTL 1.41e-01 0.131 0.0886 0.619 PB L2
ENSG00000112282 MED23 360756 sc-eQTL 7.62e-02 -0.215 0.12 0.619 PB L2
ENSG00000112303 VNN2 -774461 sc-eQTL 5.74e-02 0.206 0.107 0.619 PB L2
ENSG00000112306 RPS12 -825571 sc-eQTL 4.92e-01 -0.0426 0.0619 0.619 PB L2
ENSG00000118507 AKAP7 853531 sc-eQTL 7.73e-01 -0.0341 0.118 0.619 PB L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 7.54e-01 0.0364 0.116 0.619 PB L2
ENSG00000228495 LINC01013 -142890 sc-eQTL 9.97e-01 0.000305 0.0764 0.619 PB L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 4.02e-01 0.0693 0.0825 0.657 Pro_T L2
ENSG00000079950 STX7 -524200 sc-eQTL 3.36e-01 0.0823 0.0853 0.657 Pro_T L2
ENSG00000112282 MED23 360756 sc-eQTL 4.74e-01 0.0688 0.096 0.657 Pro_T L2
ENSG00000112303 VNN2 -774461 sc-eQTL 8.97e-01 0.0119 0.0916 0.657 Pro_T L2
ENSG00000112306 RPS12 -825571 sc-eQTL 6.79e-01 0.0144 0.0347 0.657 Pro_T L2
ENSG00000118507 AKAP7 853531 sc-eQTL 5.70e-01 0.0469 0.0824 0.657 Pro_T L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 3.44e-01 -0.0849 0.0895 0.657 Pro_T L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 9.22e-01 -0.00895 0.0916 0.65 Treg L2
ENSG00000079950 STX7 -524200 sc-eQTL 4.10e-01 -0.0756 0.0915 0.65 Treg L2
ENSG00000112282 MED23 360756 sc-eQTL 9.65e-01 -0.00413 0.0942 0.65 Treg L2
ENSG00000112303 VNN2 -774461 sc-eQTL 1.00e-01 0.127 0.0766 0.65 Treg L2
ENSG00000112306 RPS12 -825571 sc-eQTL 5.50e-01 0.0204 0.0341 0.65 Treg L2
ENSG00000118507 AKAP7 853531 sc-eQTL 4.40e-01 0.0627 0.0811 0.65 Treg L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 2.48e-02 0.215 0.0952 0.65 Treg L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 1.39e-01 0.118 0.0793 0.659 cDC L2
ENSG00000079950 STX7 -524200 sc-eQTL 9.21e-01 0.00791 0.0794 0.659 cDC L2
ENSG00000093134 VNN3 -745767 sc-eQTL 8.69e-01 0.013 0.0788 0.659 cDC L2
ENSG00000112282 MED23 360756 sc-eQTL 8.75e-01 -0.0161 0.103 0.659 cDC L2
ENSG00000112299 VNN1 -725057 sc-eQTL 8.86e-01 0.0133 0.0927 0.659 cDC L2
ENSG00000112303 VNN2 -774461 sc-eQTL 7.63e-01 0.0273 0.0903 0.659 cDC L2
ENSG00000112306 RPS12 -825571 sc-eQTL 6.40e-01 -0.0209 0.0446 0.659 cDC L2
ENSG00000118507 AKAP7 853531 sc-eQTL 4.91e-01 -0.0686 0.0994 0.659 cDC L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 8.77e-01 -0.0137 0.0883 0.659 cDC L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 9.06e-01 0.0101 0.086 0.65 cMono_IL1B L2
ENSG00000079950 STX7 -524200 sc-eQTL 5.12e-01 0.0396 0.0604 0.65 cMono_IL1B L2
ENSG00000093134 VNN3 -745767 sc-eQTL 6.44e-01 -0.0396 0.0854 0.65 cMono_IL1B L2
ENSG00000112282 MED23 360756 sc-eQTL 3.57e-02 0.177 0.0836 0.65 cMono_IL1B L2
ENSG00000112299 VNN1 -725057 sc-eQTL 9.17e-01 0.00901 0.0862 0.65 cMono_IL1B L2
ENSG00000112303 VNN2 -774461 sc-eQTL 6.03e-01 0.0359 0.0689 0.65 cMono_IL1B L2
ENSG00000112306 RPS12 -825571 sc-eQTL 4.93e-01 0.0263 0.0383 0.65 cMono_IL1B L2
ENSG00000118507 AKAP7 853531 sc-eQTL 5.16e-01 0.0535 0.0822 0.65 cMono_IL1B L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 1.87e-02 -0.173 0.0729 0.65 cMono_IL1B L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 9.80e-01 0.00229 0.0891 0.65 cMono_S100A L2
ENSG00000079950 STX7 -524200 sc-eQTL 6.53e-01 -0.0293 0.0652 0.65 cMono_S100A L2
ENSG00000093134 VNN3 -745767 sc-eQTL 8.69e-01 0.0135 0.0815 0.65 cMono_S100A L2
ENSG00000112282 MED23 360756 sc-eQTL 3.93e-01 0.0756 0.0883 0.65 cMono_S100A L2
ENSG00000112299 VNN1 -725057 sc-eQTL 6.64e-01 0.0385 0.0885 0.65 cMono_S100A L2
ENSG00000112303 VNN2 -774461 sc-eQTL 8.52e-01 -0.0108 0.058 0.65 cMono_S100A L2
ENSG00000112306 RPS12 -825571 sc-eQTL 9.82e-01 0.000946 0.0417 0.65 cMono_S100A L2
ENSG00000118507 AKAP7 853531 sc-eQTL 7.74e-01 -0.0249 0.0866 0.65 cMono_S100A L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 1.73e-01 0.105 0.0769 0.65 cMono_S100A L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 5.04e-01 -0.0649 0.0969 0.67 gdT L2
ENSG00000079950 STX7 -524200 sc-eQTL 7.97e-01 0.0262 0.102 0.67 gdT L2
ENSG00000112282 MED23 360756 sc-eQTL 8.71e-01 -0.0178 0.109 0.67 gdT L2
ENSG00000112303 VNN2 -774461 sc-eQTL 3.42e-01 -0.107 0.112 0.67 gdT L2
ENSG00000112306 RPS12 -825571 sc-eQTL 2.45e-01 0.0498 0.0426 0.67 gdT L2
ENSG00000118507 AKAP7 853531 sc-eQTL 5.12e-01 0.0747 0.114 0.67 gdT L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 1.57e-01 0.156 0.11 0.67 gdT L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 5.08e-01 0.061 0.092 0.653 intMono L2
ENSG00000079950 STX7 -524200 sc-eQTL 8.24e-01 0.0199 0.0894 0.653 intMono L2
ENSG00000093134 VNN3 -745767 sc-eQTL 2.56e-01 -0.103 0.09 0.653 intMono L2
ENSG00000112282 MED23 360756 sc-eQTL 2.60e-02 -0.22 0.098 0.653 intMono L2
ENSG00000112299 VNN1 -725057 sc-eQTL 4.22e-02 0.181 0.0884 0.653 intMono L2
ENSG00000112303 VNN2 -774461 sc-eQTL 4.05e-01 0.0755 0.0906 0.653 intMono L2
ENSG00000112306 RPS12 -825571 sc-eQTL 7.72e-01 -0.0115 0.0395 0.653 intMono L2
ENSG00000118507 AKAP7 853531 sc-eQTL 7.01e-01 0.0372 0.0967 0.653 intMono L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 9.42e-01 0.00703 0.0961 0.653 intMono L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 1.79e-01 0.115 0.0853 0.658 ncMono L2
ENSG00000079950 STX7 -524200 sc-eQTL 2.05e-01 0.0827 0.065 0.658 ncMono L2
ENSG00000093134 VNN3 -745767 sc-eQTL 2.73e-01 0.101 0.0919 0.658 ncMono L2
ENSG00000112282 MED23 360756 sc-eQTL 7.30e-01 0.0323 0.0933 0.658 ncMono L2
ENSG00000112299 VNN1 -725057 sc-eQTL 2.94e-01 0.0961 0.0912 0.658 ncMono L2
ENSG00000112303 VNN2 -774461 sc-eQTL 3.36e-01 -0.0847 0.0878 0.658 ncMono L2
ENSG00000112306 RPS12 -825571 sc-eQTL 1.59e-02 -0.106 0.0435 0.658 ncMono L2
ENSG00000118507 AKAP7 853531 sc-eQTL 9.69e-01 0.00352 0.0905 0.658 ncMono L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 5.91e-01 -0.042 0.0779 0.658 ncMono L2
ENSG00000079819 EPB41L2 925676 sc-eQTL 6.31e-01 0.0501 0.104 0.669 pDC L2
ENSG00000079950 STX7 -524200 sc-eQTL 3.80e-01 0.0659 0.0748 0.669 pDC L2
ENSG00000093134 VNN3 -745767 sc-eQTL 9.00e-01 -0.00947 0.0755 0.669 pDC L2
ENSG00000112282 MED23 360756 sc-eQTL 5.50e-02 0.201 0.104 0.669 pDC L2
ENSG00000112299 VNN1 -725057 sc-eQTL 9.77e-01 -0.00225 0.0768 0.669 pDC L2
ENSG00000112303 VNN2 -774461 sc-eQTL 5.63e-01 -0.053 0.0914 0.669 pDC L2
ENSG00000112306 RPS12 -825571 sc-eQTL 2.50e-01 -0.0724 0.0627 0.669 pDC L2
ENSG00000118507 AKAP7 853531 sc-eQTL 3.00e-02 0.185 0.0846 0.669 pDC L2
ENSG00000146409 SLC18B1 -824341 sc-eQTL 1.21e-01 -0.144 0.0925 0.669 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 925676 sc-eQTL 2.55e-01 -0.094 0.0823 0.65 B_Memory LOneK1K
ENSG00000079931 MOXD1 -412477 sc-eQTL 6.06e-01 0.0482 0.0935 0.65 B_Memory LOneK1K
ENSG00000079950 STX7 -524200 sc-eQTL 4.26e-01 0.0422 0.0529 0.65 B_Memory LOneK1K
ENSG00000112282 MED23 360756 sc-eQTL 1.94e-01 -0.105 0.0808 0.65 B_Memory LOneK1K
ENSG00000112303 VNN2 -774461 sc-eQTL 6.44e-01 -0.0388 0.0838 0.65 B_Memory LOneK1K
ENSG00000112306 RPS12 -825571 sc-eQTL 7.02e-01 -0.0183 0.0477 0.65 B_Memory LOneK1K
ENSG00000118507 AKAP7 853531 sc-eQTL 6.87e-01 -0.0332 0.0824 0.65 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -824341 sc-eQTL 5.80e-01 0.0485 0.0876 0.65 B_Memory LOneK1K
ENSG00000228495 LINC01013 -142890 sc-eQTL 8.75e-03 -0.22 0.0832 0.65 B_Memory LOneK1K
ENSG00000079819 EPB41L2 925676 sc-eQTL 5.71e-01 -0.0392 0.069 0.65 B_Naive LOneK1K
ENSG00000079931 MOXD1 -412477 sc-eQTL 1.28e-01 -0.151 0.0986 0.65 B_Naive LOneK1K
ENSG00000079950 STX7 -524200 sc-eQTL 2.58e-01 0.046 0.0406 0.65 B_Naive LOneK1K
ENSG00000112282 MED23 360756 sc-eQTL 6.21e-02 -0.142 0.0758 0.65 B_Naive LOneK1K
ENSG00000112303 VNN2 -774461 sc-eQTL 4.81e-01 0.0557 0.0789 0.65 B_Naive LOneK1K
ENSG00000112306 RPS12 -825571 sc-eQTL 1.22e-01 -0.0738 0.0475 0.65 B_Naive LOneK1K
ENSG00000118507 AKAP7 853531 sc-eQTL 1.34e-01 -0.144 0.0958 0.65 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -824341 sc-eQTL 3.03e-01 -0.0929 0.0899 0.65 B_Naive LOneK1K
ENSG00000228495 LINC01013 -142890 sc-eQTL 1.18e-10 -0.352 0.0519 0.65 B_Naive LOneK1K
ENSG00000079819 EPB41L2 925676 sc-eQTL 8.71e-01 -0.0133 0.0821 0.65 CD14_Mono LOneK1K
ENSG00000079950 STX7 -524200 sc-eQTL 8.41e-01 0.0101 0.0505 0.65 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -745767 sc-eQTL 5.44e-01 -0.05 0.0823 0.65 CD14_Mono LOneK1K
ENSG00000112282 MED23 360756 sc-eQTL 1.97e-02 0.184 0.0781 0.65 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -725057 sc-eQTL 7.60e-01 0.0262 0.0858 0.65 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -774461 sc-eQTL 7.48e-01 -0.0182 0.0568 0.65 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -825571 sc-eQTL 6.86e-01 0.0157 0.0389 0.65 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 853531 sc-eQTL 9.59e-01 0.00402 0.0777 0.65 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -824341 sc-eQTL 2.85e-01 -0.0741 0.0691 0.65 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 925676 sc-eQTL 2.76e-01 0.0956 0.0875 0.653 CD16_Mono LOneK1K
ENSG00000079950 STX7 -524200 sc-eQTL 1.37e-01 0.0926 0.062 0.653 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -745767 sc-eQTL 8.90e-01 -0.0127 0.0917 0.653 CD16_Mono LOneK1K
ENSG00000112282 MED23 360756 sc-eQTL 7.02e-01 -0.0342 0.0892 0.653 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -725057 sc-eQTL 1.76e-01 0.123 0.0904 0.653 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -774461 sc-eQTL 2.97e-01 -0.0893 0.0854 0.653 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -825571 sc-eQTL 1.78e-01 -0.0489 0.0362 0.653 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 853531 sc-eQTL 7.39e-01 0.0305 0.0916 0.653 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -824341 sc-eQTL 8.79e-01 0.0135 0.0882 0.653 CD16_Mono LOneK1K
ENSG00000079950 STX7 -524200 sc-eQTL 6.44e-01 0.0328 0.0708 0.649 NK_CD56dim LOneK1K
ENSG00000112282 MED23 360756 sc-eQTL 2.84e-01 0.0737 0.0686 0.649 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -774461 sc-eQTL 4.93e-01 -0.0616 0.0896 0.649 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -825571 sc-eQTL 5.86e-01 0.02 0.0366 0.649 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 853531 sc-eQTL 2.82e-01 0.0817 0.0757 0.649 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079819 EPB41L2 925676 eQTL 0.0013 -0.0648 0.0201 0.00241 0.0 0.397
ENSG00000118523 CCN2 37626 pQTL 2.32e-05 -0.0872 0.0205 0.0204 0.017 0.395

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079819 EPB41L2 925676 2.76e-07 1.27e-07 4.47e-08 2.09e-07 9.25e-08 1e-07 1.61e-07 5.4e-08 1.44e-07 6.08e-08 1.54e-07 8.68e-08 1.71e-07 7.64e-08 5.69e-08 7.36e-08 3.98e-08 1.4e-07 6.32e-08 4.21e-08 1.21e-07 1.26e-07 1.39e-07 3.23e-08 1.4e-07 1.16e-07 1.07e-07 9.74e-08 1.09e-07 1.02e-07 1.06e-07 3.6e-08 3.89e-08 8.72e-08 6.67e-08 3.14e-08 5.42e-08 8.61e-08 6.28e-08 3.67e-08 5.37e-08 1.36e-07 3.19e-08 1.35e-08 3.41e-08 1.68e-08 1.19e-07 1.88e-09 5.04e-08