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Genes within 1Mb (chr6:131972425:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 909103 sc-eQTL 1.89e-03 -0.194 0.0616 0.393 B L1
ENSG00000079931 MOXD1 -429050 sc-eQTL 4.81e-01 -0.0648 0.0918 0.393 B L1
ENSG00000079950 STX7 -540773 sc-eQTL 7.89e-01 -0.00927 0.0347 0.393 B L1
ENSG00000112282 MED23 344183 sc-eQTL 1.50e-02 -0.167 0.0681 0.393 B L1
ENSG00000112303 VNN2 -791034 sc-eQTL 9.74e-01 0.00215 0.0652 0.393 B L1
ENSG00000112306 RPS12 -842144 sc-eQTL 5.10e-01 -0.026 0.0394 0.393 B L1
ENSG00000118507 AKAP7 836958 sc-eQTL 2.86e-01 -0.0872 0.0816 0.393 B L1
ENSG00000146409 SLC18B1 -840914 sc-eQTL 2.41e-01 -0.0971 0.0826 0.393 B L1
ENSG00000228495 LINC01013 -159463 sc-eQTL 1.44e-02 -0.132 0.0536 0.393 B L1
ENSG00000079819 EPB41L2 909103 sc-eQTL 2.34e-01 -0.0974 0.0815 0.393 CD4T L1
ENSG00000079950 STX7 -540773 sc-eQTL 2.70e-01 -0.0736 0.0666 0.393 CD4T L1
ENSG00000112282 MED23 344183 sc-eQTL 7.55e-01 -0.0166 0.053 0.393 CD4T L1
ENSG00000112303 VNN2 -791034 sc-eQTL 3.81e-01 0.0507 0.0577 0.393 CD4T L1
ENSG00000112306 RPS12 -842144 sc-eQTL 3.66e-01 0.0355 0.0392 0.393 CD4T L1
ENSG00000118507 AKAP7 836958 sc-eQTL 8.92e-02 0.121 0.0706 0.393 CD4T L1
ENSG00000146409 SLC18B1 -840914 sc-eQTL 4.32e-01 0.0625 0.0794 0.393 CD4T L1
ENSG00000079950 STX7 -540773 sc-eQTL 2.78e-01 -0.072 0.0662 0.393 CD8T L1
ENSG00000112282 MED23 344183 sc-eQTL 7.16e-01 0.0238 0.0654 0.393 CD8T L1
ENSG00000112303 VNN2 -791034 sc-eQTL 8.44e-01 0.0153 0.0775 0.393 CD8T L1
ENSG00000112306 RPS12 -842144 sc-eQTL 2.71e-01 0.0291 0.0264 0.393 CD8T L1
ENSG00000118507 AKAP7 836958 sc-eQTL 3.28e-01 0.0729 0.0743 0.393 CD8T L1
ENSG00000146409 SLC18B1 -840914 sc-eQTL 3.91e-01 0.0687 0.08 0.393 CD8T L1
ENSG00000079819 EPB41L2 909103 sc-eQTL 5.25e-01 0.0427 0.0671 0.403 DC L1
ENSG00000079950 STX7 -540773 sc-eQTL 4.04e-01 0.0495 0.0592 0.403 DC L1
ENSG00000093134 VNN3 -762340 sc-eQTL 2.51e-01 0.0844 0.0733 0.403 DC L1
ENSG00000112282 MED23 344183 sc-eQTL 3.85e-01 0.0749 0.0862 0.403 DC L1
ENSG00000112299 VNN1 -741630 sc-eQTL 2.72e-01 0.0873 0.0792 0.403 DC L1
ENSG00000112303 VNN2 -791034 sc-eQTL 5.22e-01 0.0544 0.0849 0.403 DC L1
ENSG00000112306 RPS12 -842144 sc-eQTL 4.61e-01 -0.0351 0.0476 0.403 DC L1
ENSG00000118507 AKAP7 836958 sc-eQTL 7.78e-01 -0.024 0.0849 0.403 DC L1
ENSG00000146409 SLC18B1 -840914 sc-eQTL 8.66e-01 -0.0127 0.0754 0.403 DC L1
ENSG00000079819 EPB41L2 909103 sc-eQTL 3.80e-02 0.157 0.075 0.393 Mono L1
ENSG00000079950 STX7 -540773 sc-eQTL 9.04e-01 -0.00547 0.0451 0.393 Mono L1
ENSG00000093134 VNN3 -762340 sc-eQTL 6.51e-01 -0.0351 0.0774 0.393 Mono L1
ENSG00000112282 MED23 344183 sc-eQTL 7.03e-02 0.133 0.073 0.393 Mono L1
ENSG00000112299 VNN1 -741630 sc-eQTL 8.02e-02 0.145 0.0828 0.393 Mono L1
ENSG00000112303 VNN2 -791034 sc-eQTL 1.03e-02 -0.15 0.0579 0.393 Mono L1
ENSG00000112306 RPS12 -842144 sc-eQTL 3.05e-01 -0.0361 0.0352 0.393 Mono L1
ENSG00000118507 AKAP7 836958 sc-eQTL 7.11e-01 -0.0271 0.073 0.393 Mono L1
ENSG00000146409 SLC18B1 -840914 sc-eQTL 2.89e-01 -0.074 0.0696 0.393 Mono L1
ENSG00000079950 STX7 -540773 sc-eQTL 5.77e-01 -0.0385 0.0688 0.393 NK L1
ENSG00000112282 MED23 344183 sc-eQTL 6.45e-01 0.029 0.0629 0.393 NK L1
ENSG00000112303 VNN2 -791034 sc-eQTL 6.83e-01 -0.035 0.0856 0.393 NK L1
ENSG00000112306 RPS12 -842144 sc-eQTL 2.91e-01 0.0375 0.0354 0.393 NK L1
ENSG00000118507 AKAP7 836958 sc-eQTL 9.17e-01 0.00784 0.0753 0.393 NK L1
ENSG00000079819 EPB41L2 909103 sc-eQTL 9.55e-01 -0.00418 0.0736 0.393 Other_T L1
ENSG00000079950 STX7 -540773 sc-eQTL 8.64e-01 -0.0114 0.0666 0.393 Other_T L1
ENSG00000112282 MED23 344183 sc-eQTL 9.55e-01 0.00473 0.0832 0.393 Other_T L1
ENSG00000112303 VNN2 -791034 sc-eQTL 1.15e-01 0.127 0.0801 0.393 Other_T L1
ENSG00000112306 RPS12 -842144 sc-eQTL 9.42e-02 0.0533 0.0317 0.393 Other_T L1
ENSG00000118507 AKAP7 836958 sc-eQTL 9.51e-01 0.00444 0.0727 0.393 Other_T L1
ENSG00000146409 SLC18B1 -840914 sc-eQTL 6.91e-01 -0.0348 0.0874 0.393 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 909103 sc-eQTL 6.42e-01 0.0383 0.0823 0.39 B_Activated L2
ENSG00000079931 MOXD1 -429050 sc-eQTL 6.53e-01 0.042 0.0934 0.39 B_Activated L2
ENSG00000079950 STX7 -540773 sc-eQTL 6.93e-01 -0.0347 0.0876 0.39 B_Activated L2
ENSG00000112282 MED23 344183 sc-eQTL 7.48e-02 -0.172 0.0962 0.39 B_Activated L2
ENSG00000112303 VNN2 -791034 sc-eQTL 1.92e-01 0.122 0.0928 0.39 B_Activated L2
ENSG00000112306 RPS12 -842144 sc-eQTL 1.88e-01 0.0656 0.0497 0.39 B_Activated L2
ENSG00000118507 AKAP7 836958 sc-eQTL 7.84e-02 0.17 0.0959 0.39 B_Activated L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 7.00e-01 -0.0338 0.0875 0.39 B_Activated L2
ENSG00000228495 LINC01013 -159463 sc-eQTL 4.62e-01 -0.0614 0.0833 0.39 B_Activated L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 4.00e-02 -0.175 0.0847 0.395 B_Intermediate L2
ENSG00000079931 MOXD1 -429050 sc-eQTL 7.74e-01 0.0238 0.0827 0.395 B_Intermediate L2
ENSG00000079950 STX7 -540773 sc-eQTL 1.41e-01 -0.0795 0.0539 0.395 B_Intermediate L2
ENSG00000112282 MED23 344183 sc-eQTL 1.76e-01 -0.111 0.082 0.395 B_Intermediate L2
ENSG00000112303 VNN2 -791034 sc-eQTL 8.40e-01 0.0165 0.0815 0.395 B_Intermediate L2
ENSG00000112306 RPS12 -842144 sc-eQTL 8.26e-01 -0.011 0.0499 0.395 B_Intermediate L2
ENSG00000118507 AKAP7 836958 sc-eQTL 6.72e-01 0.0354 0.0837 0.395 B_Intermediate L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 8.56e-01 0.0163 0.0899 0.395 B_Intermediate L2
ENSG00000228495 LINC01013 -159463 sc-eQTL 1.64e-01 0.106 0.0761 0.395 B_Intermediate L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 1.58e-02 -0.193 0.0792 0.394 B_Memory L2
ENSG00000079931 MOXD1 -429050 sc-eQTL 8.42e-01 0.0166 0.0832 0.394 B_Memory L2
ENSG00000079950 STX7 -540773 sc-eQTL 8.32e-01 0.0139 0.0653 0.394 B_Memory L2
ENSG00000112282 MED23 344183 sc-eQTL 3.26e-01 -0.0827 0.0839 0.394 B_Memory L2
ENSG00000112303 VNN2 -791034 sc-eQTL 8.85e-01 -0.0123 0.0854 0.394 B_Memory L2
ENSG00000112306 RPS12 -842144 sc-eQTL 6.49e-01 0.0188 0.0411 0.394 B_Memory L2
ENSG00000118507 AKAP7 836958 sc-eQTL 1.36e-01 0.13 0.0871 0.394 B_Memory L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 3.83e-01 -0.075 0.0857 0.394 B_Memory L2
ENSG00000228495 LINC01013 -159463 sc-eQTL 5.66e-01 -0.0459 0.08 0.394 B_Memory L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 1.44e-01 -0.104 0.0708 0.393 B_Naive1 L2
ENSG00000079931 MOXD1 -429050 sc-eQTL 7.60e-01 -0.0296 0.0967 0.393 B_Naive1 L2
ENSG00000079950 STX7 -540773 sc-eQTL 7.07e-01 -0.0159 0.0423 0.393 B_Naive1 L2
ENSG00000112282 MED23 344183 sc-eQTL 4.40e-02 -0.152 0.075 0.393 B_Naive1 L2
ENSG00000112303 VNN2 -791034 sc-eQTL 8.56e-01 0.0149 0.0821 0.393 B_Naive1 L2
ENSG00000112306 RPS12 -842144 sc-eQTL 2.15e-01 -0.058 0.0466 0.393 B_Naive1 L2
ENSG00000118507 AKAP7 836958 sc-eQTL 4.32e-01 -0.0745 0.0946 0.393 B_Naive1 L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 8.13e-02 -0.157 0.0896 0.393 B_Naive1 L2
ENSG00000228495 LINC01013 -159463 sc-eQTL 2.05e-02 -0.138 0.059 0.393 B_Naive1 L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 2.25e-02 -0.182 0.0791 0.393 B_Naive2 L2
ENSG00000079931 MOXD1 -429050 sc-eQTL 7.01e-01 -0.0349 0.0907 0.393 B_Naive2 L2
ENSG00000079950 STX7 -540773 sc-eQTL 3.28e-01 0.0484 0.0493 0.393 B_Naive2 L2
ENSG00000112282 MED23 344183 sc-eQTL 9.31e-01 -0.00793 0.0913 0.393 B_Naive2 L2
ENSG00000112303 VNN2 -791034 sc-eQTL 3.27e-01 -0.0889 0.0906 0.393 B_Naive2 L2
ENSG00000112306 RPS12 -842144 sc-eQTL 3.24e-01 -0.0475 0.048 0.393 B_Naive2 L2
ENSG00000118507 AKAP7 836958 sc-eQTL 5.63e-02 -0.183 0.0952 0.393 B_Naive2 L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 2.27e-01 -0.111 0.0914 0.393 B_Naive2 L2
ENSG00000228495 LINC01013 -159463 sc-eQTL 1.15e-02 -0.16 0.0626 0.393 B_Naive2 L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 3.19e-01 -0.0734 0.0734 0.398 CD4_CTL L2
ENSG00000079950 STX7 -540773 sc-eQTL 3.57e-01 -0.0836 0.0905 0.398 CD4_CTL L2
ENSG00000112282 MED23 344183 sc-eQTL 4.84e-01 -0.066 0.0942 0.398 CD4_CTL L2
ENSG00000112303 VNN2 -791034 sc-eQTL 6.25e-01 0.0447 0.0914 0.398 CD4_CTL L2
ENSG00000112306 RPS12 -842144 sc-eQTL 8.91e-01 -0.00577 0.0423 0.398 CD4_CTL L2
ENSG00000118507 AKAP7 836958 sc-eQTL 6.86e-01 -0.0366 0.0904 0.398 CD4_CTL L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 5.75e-01 0.0479 0.0852 0.398 CD4_CTL L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 5.96e-01 -0.0454 0.0854 0.393 CD4_Naive L2
ENSG00000079950 STX7 -540773 sc-eQTL 6.86e-01 -0.0293 0.0725 0.393 CD4_Naive L2
ENSG00000112282 MED23 344183 sc-eQTL 8.80e-01 0.00938 0.0619 0.393 CD4_Naive L2
ENSG00000112303 VNN2 -791034 sc-eQTL 6.25e-01 0.0328 0.0672 0.393 CD4_Naive L2
ENSG00000112306 RPS12 -842144 sc-eQTL 5.18e-01 0.0282 0.0436 0.393 CD4_Naive L2
ENSG00000118507 AKAP7 836958 sc-eQTL 1.07e-01 0.13 0.0805 0.393 CD4_Naive L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 4.08e-01 0.0694 0.0838 0.393 CD4_Naive L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 8.95e-03 -0.227 0.0861 0.393 CD4_TCM L2
ENSG00000079950 STX7 -540773 sc-eQTL 6.97e-02 -0.145 0.0793 0.393 CD4_TCM L2
ENSG00000112282 MED23 344183 sc-eQTL 7.08e-01 -0.0253 0.0672 0.393 CD4_TCM L2
ENSG00000112303 VNN2 -791034 sc-eQTL 7.49e-01 -0.0253 0.0788 0.393 CD4_TCM L2
ENSG00000112306 RPS12 -842144 sc-eQTL 6.65e-01 0.0177 0.0408 0.393 CD4_TCM L2
ENSG00000118507 AKAP7 836958 sc-eQTL 1.60e-01 0.11 0.0777 0.393 CD4_TCM L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 8.16e-01 0.0221 0.0946 0.393 CD4_TCM L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 7.81e-02 0.159 0.09 0.393 CD4_TEM L2
ENSG00000079950 STX7 -540773 sc-eQTL 3.99e-01 -0.0765 0.0905 0.393 CD4_TEM L2
ENSG00000112282 MED23 344183 sc-eQTL 8.53e-01 -0.0155 0.0835 0.393 CD4_TEM L2
ENSG00000112303 VNN2 -791034 sc-eQTL 9.81e-01 -0.00207 0.087 0.393 CD4_TEM L2
ENSG00000112306 RPS12 -842144 sc-eQTL 5.19e-01 0.0231 0.0357 0.393 CD4_TEM L2
ENSG00000118507 AKAP7 836958 sc-eQTL 7.39e-01 -0.0306 0.0917 0.393 CD4_TEM L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 2.11e-01 0.111 0.0884 0.393 CD4_TEM L2
ENSG00000079950 STX7 -540773 sc-eQTL 8.49e-01 0.0144 0.0757 0.393 CD8_CTL L2
ENSG00000112282 MED23 344183 sc-eQTL 1.57e-01 -0.11 0.0772 0.393 CD8_CTL L2
ENSG00000112303 VNN2 -791034 sc-eQTL 7.07e-01 -0.0323 0.086 0.393 CD8_CTL L2
ENSG00000112306 RPS12 -842144 sc-eQTL 2.84e-01 0.0494 0.0459 0.393 CD8_CTL L2
ENSG00000118507 AKAP7 836958 sc-eQTL 6.97e-01 0.0338 0.0868 0.393 CD8_CTL L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 5.69e-01 0.0509 0.0892 0.393 CD8_CTL L2
ENSG00000079950 STX7 -540773 sc-eQTL 1.10e-01 -0.146 0.091 0.393 CD8_Naive L2
ENSG00000112282 MED23 344183 sc-eQTL 1.97e-01 0.0949 0.0733 0.393 CD8_Naive L2
ENSG00000112303 VNN2 -791034 sc-eQTL 3.51e-01 0.0736 0.0788 0.393 CD8_Naive L2
ENSG00000112306 RPS12 -842144 sc-eQTL 9.10e-01 0.00511 0.0452 0.393 CD8_Naive L2
ENSG00000118507 AKAP7 836958 sc-eQTL 7.09e-01 -0.0311 0.0831 0.393 CD8_Naive L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 9.90e-01 -0.00112 0.0907 0.393 CD8_Naive L2
ENSG00000079950 STX7 -540773 sc-eQTL 5.43e-01 0.0538 0.0884 0.394 CD8_TCM L2
ENSG00000112282 MED23 344183 sc-eQTL 7.01e-01 -0.0341 0.0888 0.394 CD8_TCM L2
ENSG00000112303 VNN2 -791034 sc-eQTL 5.26e-01 -0.0557 0.0877 0.394 CD8_TCM L2
ENSG00000112306 RPS12 -842144 sc-eQTL 9.33e-01 0.0036 0.0428 0.394 CD8_TCM L2
ENSG00000118507 AKAP7 836958 sc-eQTL 6.43e-01 -0.0442 0.0953 0.394 CD8_TCM L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 2.98e-01 0.0975 0.0935 0.394 CD8_TCM L2
ENSG00000079950 STX7 -540773 sc-eQTL 7.12e-01 -0.0345 0.0931 0.384 CD8_TEM L2
ENSG00000112282 MED23 344183 sc-eQTL 5.99e-01 -0.0472 0.0896 0.384 CD8_TEM L2
ENSG00000112303 VNN2 -791034 sc-eQTL 1.84e-01 -0.123 0.0922 0.384 CD8_TEM L2
ENSG00000112306 RPS12 -842144 sc-eQTL 8.41e-02 -0.0858 0.0494 0.384 CD8_TEM L2
ENSG00000118507 AKAP7 836958 sc-eQTL 4.03e-02 0.186 0.0902 0.384 CD8_TEM L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 4.29e-01 0.0745 0.094 0.384 CD8_TEM L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 4.26e-01 0.0655 0.0821 0.392 MAIT L2
ENSG00000079950 STX7 -540773 sc-eQTL 9.01e-01 -0.0106 0.0857 0.392 MAIT L2
ENSG00000112282 MED23 344183 sc-eQTL 8.64e-01 0.0153 0.0896 0.392 MAIT L2
ENSG00000112303 VNN2 -791034 sc-eQTL 1.13e-01 0.138 0.0866 0.392 MAIT L2
ENSG00000112306 RPS12 -842144 sc-eQTL 4.52e-01 0.0322 0.0428 0.392 MAIT L2
ENSG00000118507 AKAP7 836958 sc-eQTL 7.68e-01 -0.0261 0.0885 0.392 MAIT L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 3.87e-01 -0.0777 0.0897 0.392 MAIT L2
ENSG00000079950 STX7 -540773 sc-eQTL 4.71e-01 -0.0646 0.0896 0.396 NK_CD56bright L2
ENSG00000112282 MED23 344183 sc-eQTL 3.41e-01 -0.0904 0.0946 0.396 NK_CD56bright L2
ENSG00000112303 VNN2 -791034 sc-eQTL 4.48e-01 0.0691 0.0909 0.396 NK_CD56bright L2
ENSG00000112306 RPS12 -842144 sc-eQTL 4.39e-01 0.0393 0.0507 0.396 NK_CD56bright L2
ENSG00000118507 AKAP7 836958 sc-eQTL 8.70e-02 -0.157 0.0913 0.396 NK_CD56bright L2
ENSG00000079950 STX7 -540773 sc-eQTL 9.22e-01 -0.00719 0.0734 0.392 NK_CD56dim L2
ENSG00000112282 MED23 344183 sc-eQTL 5.63e-02 0.144 0.0748 0.392 NK_CD56dim L2
ENSG00000112303 VNN2 -791034 sc-eQTL 4.53e-01 -0.0689 0.0917 0.392 NK_CD56dim L2
ENSG00000112306 RPS12 -842144 sc-eQTL 3.53e-01 0.0339 0.0363 0.392 NK_CD56dim L2
ENSG00000118507 AKAP7 836958 sc-eQTL 5.39e-01 0.0492 0.08 0.392 NK_CD56dim L2
ENSG00000079950 STX7 -540773 sc-eQTL 3.41e-01 -0.0851 0.0892 0.395 NK_HLA L2
ENSG00000112282 MED23 344183 sc-eQTL 9.75e-01 0.00287 0.0904 0.395 NK_HLA L2
ENSG00000112303 VNN2 -791034 sc-eQTL 2.41e-01 -0.106 0.0902 0.395 NK_HLA L2
ENSG00000112306 RPS12 -842144 sc-eQTL 5.16e-02 0.0818 0.0418 0.395 NK_HLA L2
ENSG00000118507 AKAP7 836958 sc-eQTL 1.42e-01 0.137 0.0932 0.395 NK_HLA L2
ENSG00000079950 STX7 -540773 sc-eQTL 6.96e-01 -0.0308 0.0788 0.392 NK_cytokine L2
ENSG00000112282 MED23 344183 sc-eQTL 3.62e-01 -0.0742 0.0813 0.392 NK_cytokine L2
ENSG00000112303 VNN2 -791034 sc-eQTL 8.36e-01 -0.0183 0.0886 0.392 NK_cytokine L2
ENSG00000112306 RPS12 -842144 sc-eQTL 3.03e-01 0.0495 0.0479 0.392 NK_cytokine L2
ENSG00000118507 AKAP7 836958 sc-eQTL 5.62e-01 0.0477 0.0822 0.392 NK_cytokine L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 7.46e-01 -0.0388 0.12 0.367 PB L2
ENSG00000079931 MOXD1 -429050 sc-eQTL 2.07e-01 0.125 0.0988 0.367 PB L2
ENSG00000079950 STX7 -540773 sc-eQTL 4.05e-01 0.0693 0.0828 0.367 PB L2
ENSG00000112282 MED23 344183 sc-eQTL 9.73e-01 -0.00382 0.113 0.367 PB L2
ENSG00000112303 VNN2 -791034 sc-eQTL 5.16e-01 0.0661 0.101 0.367 PB L2
ENSG00000112306 RPS12 -842144 sc-eQTL 6.22e-02 -0.107 0.0567 0.367 PB L2
ENSG00000118507 AKAP7 836958 sc-eQTL 9.98e-02 -0.18 0.109 0.367 PB L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 9.43e-01 0.00771 0.108 0.367 PB L2
ENSG00000228495 LINC01013 -159463 sc-eQTL 7.96e-01 0.0184 0.071 0.367 PB L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 5.46e-01 0.0477 0.0788 0.398 Pro_T L2
ENSG00000079950 STX7 -540773 sc-eQTL 2.65e-01 0.0908 0.0813 0.398 Pro_T L2
ENSG00000112282 MED23 344183 sc-eQTL 6.47e-01 0.0421 0.0917 0.398 Pro_T L2
ENSG00000112303 VNN2 -791034 sc-eQTL 4.99e-01 0.0593 0.0874 0.398 Pro_T L2
ENSG00000112306 RPS12 -842144 sc-eQTL 6.79e-01 0.0137 0.0331 0.398 Pro_T L2
ENSG00000118507 AKAP7 836958 sc-eQTL 9.70e-01 0.00295 0.0787 0.398 Pro_T L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 9.47e-01 -0.00566 0.0857 0.398 Pro_T L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 5.84e-01 0.0485 0.0883 0.393 Treg L2
ENSG00000079950 STX7 -540773 sc-eQTL 6.28e-01 -0.0429 0.0884 0.393 Treg L2
ENSG00000112282 MED23 344183 sc-eQTL 9.03e-01 0.0111 0.0909 0.393 Treg L2
ENSG00000112303 VNN2 -791034 sc-eQTL 4.18e-01 0.0602 0.0743 0.393 Treg L2
ENSG00000112306 RPS12 -842144 sc-eQTL 4.90e-01 0.0227 0.0329 0.393 Treg L2
ENSG00000118507 AKAP7 836958 sc-eQTL 1.69e-01 0.108 0.078 0.393 Treg L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 1.06e-01 0.15 0.0924 0.393 Treg L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 9.88e-01 0.00113 0.0765 0.4 cDC L2
ENSG00000079950 STX7 -540773 sc-eQTL 4.37e-01 0.0593 0.076 0.4 cDC L2
ENSG00000093134 VNN3 -762340 sc-eQTL 7.45e-02 0.134 0.075 0.4 cDC L2
ENSG00000112282 MED23 344183 sc-eQTL 2.76e-01 0.107 0.098 0.4 cDC L2
ENSG00000112299 VNN1 -741630 sc-eQTL 7.65e-01 0.0266 0.0889 0.4 cDC L2
ENSG00000112303 VNN2 -791034 sc-eQTL 8.04e-01 0.0215 0.0866 0.4 cDC L2
ENSG00000112306 RPS12 -842144 sc-eQTL 4.49e-01 -0.0324 0.0427 0.4 cDC L2
ENSG00000118507 AKAP7 836958 sc-eQTL 1.16e-01 -0.15 0.0948 0.4 cDC L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 7.13e-01 -0.0312 0.0847 0.4 cDC L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 5.47e-02 0.157 0.081 0.393 cMono_IL1B L2
ENSG00000079950 STX7 -540773 sc-eQTL 6.73e-01 0.0243 0.0575 0.393 cMono_IL1B L2
ENSG00000093134 VNN3 -762340 sc-eQTL 5.95e-01 -0.0433 0.0812 0.393 cMono_IL1B L2
ENSG00000112282 MED23 344183 sc-eQTL 1.14e-01 0.127 0.0798 0.393 cMono_IL1B L2
ENSG00000112299 VNN1 -741630 sc-eQTL 5.80e-02 0.155 0.0813 0.393 cMono_IL1B L2
ENSG00000112303 VNN2 -791034 sc-eQTL 3.18e-01 -0.0655 0.0654 0.393 cMono_IL1B L2
ENSG00000112306 RPS12 -842144 sc-eQTL 4.68e-01 -0.0264 0.0364 0.393 cMono_IL1B L2
ENSG00000118507 AKAP7 836958 sc-eQTL 7.01e-01 0.0301 0.0782 0.393 cMono_IL1B L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 2.18e-01 -0.0864 0.07 0.393 cMono_IL1B L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 2.17e-01 0.106 0.086 0.393 cMono_S100A L2
ENSG00000079950 STX7 -540773 sc-eQTL 8.33e-01 -0.0133 0.0632 0.393 cMono_S100A L2
ENSG00000093134 VNN3 -762340 sc-eQTL 9.35e-01 0.00641 0.079 0.393 cMono_S100A L2
ENSG00000112282 MED23 344183 sc-eQTL 2.94e-01 0.09 0.0855 0.393 cMono_S100A L2
ENSG00000112299 VNN1 -741630 sc-eQTL 2.57e-02 0.19 0.0847 0.393 cMono_S100A L2
ENSG00000112303 VNN2 -791034 sc-eQTL 1.18e-01 -0.0876 0.0558 0.393 cMono_S100A L2
ENSG00000112306 RPS12 -842144 sc-eQTL 6.17e-01 -0.0203 0.0404 0.393 cMono_S100A L2
ENSG00000118507 AKAP7 836958 sc-eQTL 6.72e-01 -0.0356 0.0839 0.393 cMono_S100A L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 5.48e-01 0.045 0.0748 0.393 cMono_S100A L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 7.72e-01 -0.0273 0.0939 0.409 gdT L2
ENSG00000079950 STX7 -540773 sc-eQTL 4.97e-01 0.0669 0.0982 0.409 gdT L2
ENSG00000112282 MED23 344183 sc-eQTL 8.02e-01 0.0266 0.106 0.409 gdT L2
ENSG00000112303 VNN2 -791034 sc-eQTL 4.70e-01 0.0787 0.109 0.409 gdT L2
ENSG00000112306 RPS12 -842144 sc-eQTL 2.74e-01 0.0453 0.0413 0.409 gdT L2
ENSG00000118507 AKAP7 836958 sc-eQTL 6.29e-01 0.0532 0.11 0.409 gdT L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 4.49e-01 0.0812 0.107 0.409 gdT L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 4.16e-02 0.176 0.0857 0.391 intMono L2
ENSG00000079950 STX7 -540773 sc-eQTL 3.46e-01 -0.0793 0.0839 0.391 intMono L2
ENSG00000093134 VNN3 -762340 sc-eQTL 4.93e-01 -0.0582 0.0848 0.391 intMono L2
ENSG00000112282 MED23 344183 sc-eQTL 5.13e-01 -0.0611 0.0932 0.391 intMono L2
ENSG00000112299 VNN1 -741630 sc-eQTL 3.75e-04 0.294 0.0814 0.391 intMono L2
ENSG00000112303 VNN2 -791034 sc-eQTL 5.70e-01 -0.0485 0.0853 0.391 intMono L2
ENSG00000112306 RPS12 -842144 sc-eQTL 3.47e-01 -0.0349 0.037 0.391 intMono L2
ENSG00000118507 AKAP7 836958 sc-eQTL 5.66e-01 -0.0523 0.091 0.391 intMono L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 5.12e-01 -0.0593 0.0903 0.391 intMono L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 3.31e-01 0.0793 0.0813 0.398 ncMono L2
ENSG00000079950 STX7 -540773 sc-eQTL 6.86e-01 -0.0251 0.0621 0.398 ncMono L2
ENSG00000093134 VNN3 -762340 sc-eQTL 5.56e-02 0.167 0.0869 0.398 ncMono L2
ENSG00000112282 MED23 344183 sc-eQTL 4.26e-01 -0.0708 0.0887 0.398 ncMono L2
ENSG00000112299 VNN1 -741630 sc-eQTL 2.70e-01 0.0959 0.0868 0.398 ncMono L2
ENSG00000112303 VNN2 -791034 sc-eQTL 8.05e-02 -0.146 0.083 0.398 ncMono L2
ENSG00000112306 RPS12 -842144 sc-eQTL 5.72e-02 -0.0796 0.0416 0.398 ncMono L2
ENSG00000118507 AKAP7 836958 sc-eQTL 8.65e-01 0.0147 0.0861 0.398 ncMono L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 7.40e-01 0.0246 0.0741 0.398 ncMono L2
ENSG00000079819 EPB41L2 909103 sc-eQTL 6.34e-01 0.0471 0.0989 0.429 pDC L2
ENSG00000079950 STX7 -540773 sc-eQTL 5.98e-01 0.0377 0.0712 0.429 pDC L2
ENSG00000093134 VNN3 -762340 sc-eQTL 6.49e-01 0.0327 0.0717 0.429 pDC L2
ENSG00000112282 MED23 344183 sc-eQTL 7.57e-01 0.031 0.1 0.429 pDC L2
ENSG00000112299 VNN1 -741630 sc-eQTL 3.46e-01 0.0688 0.0728 0.429 pDC L2
ENSG00000112303 VNN2 -791034 sc-eQTL 5.67e-01 0.0497 0.0868 0.429 pDC L2
ENSG00000112306 RPS12 -842144 sc-eQTL 2.01e-01 -0.0764 0.0595 0.429 pDC L2
ENSG00000118507 AKAP7 836958 sc-eQTL 7.28e-01 0.0284 0.0816 0.429 pDC L2
ENSG00000146409 SLC18B1 -840914 sc-eQTL 6.68e-02 -0.162 0.0876 0.429 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 909103 sc-eQTL 7.48e-03 -0.209 0.0774 0.393 B_Memory LOneK1K
ENSG00000079931 MOXD1 -429050 sc-eQTL 7.20e-01 0.032 0.0891 0.393 B_Memory LOneK1K
ENSG00000079950 STX7 -540773 sc-eQTL 3.20e-01 -0.0502 0.0504 0.393 B_Memory LOneK1K
ENSG00000112282 MED23 344183 sc-eQTL 3.14e-03 -0.226 0.0757 0.393 B_Memory LOneK1K
ENSG00000112303 VNN2 -791034 sc-eQTL 7.20e-01 0.0287 0.0799 0.393 B_Memory LOneK1K
ENSG00000112306 RPS12 -842144 sc-eQTL 8.96e-01 0.00598 0.0455 0.393 B_Memory LOneK1K
ENSG00000118507 AKAP7 836958 sc-eQTL 4.30e-01 0.0621 0.0785 0.393 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -840914 sc-eQTL 7.50e-01 -0.0266 0.0835 0.393 B_Memory LOneK1K
ENSG00000228495 LINC01013 -159463 sc-eQTL 6.17e-01 0.0403 0.0806 0.393 B_Memory LOneK1K
ENSG00000079819 EPB41L2 909103 sc-eQTL 3.70e-03 -0.192 0.0655 0.393 B_Naive LOneK1K
ENSG00000079931 MOXD1 -429050 sc-eQTL 5.13e-01 -0.0627 0.0957 0.393 B_Naive LOneK1K
ENSG00000079950 STX7 -540773 sc-eQTL 8.86e-01 -0.00566 0.0393 0.393 B_Naive LOneK1K
ENSG00000112282 MED23 344183 sc-eQTL 4.44e-02 -0.148 0.0731 0.393 B_Naive LOneK1K
ENSG00000112303 VNN2 -791034 sc-eQTL 6.65e-01 -0.0331 0.0763 0.393 B_Naive LOneK1K
ENSG00000112306 RPS12 -842144 sc-eQTL 1.41e-01 -0.0679 0.046 0.393 B_Naive LOneK1K
ENSG00000118507 AKAP7 836958 sc-eQTL 1.89e-01 -0.122 0.0927 0.393 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -840914 sc-eQTL 9.58e-02 -0.145 0.0866 0.393 B_Naive LOneK1K
ENSG00000228495 LINC01013 -159463 sc-eQTL 2.78e-03 -0.164 0.0542 0.393 B_Naive LOneK1K
ENSG00000079819 EPB41L2 909103 sc-eQTL 6.01e-02 0.148 0.0781 0.393 CD14_Mono LOneK1K
ENSG00000079950 STX7 -540773 sc-eQTL 8.86e-01 0.00696 0.0484 0.393 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -762340 sc-eQTL 5.67e-01 -0.0452 0.0789 0.393 CD14_Mono LOneK1K
ENSG00000112282 MED23 344183 sc-eQTL 6.05e-02 0.142 0.0752 0.393 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -741630 sc-eQTL 3.70e-02 0.171 0.0815 0.393 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -791034 sc-eQTL 5.20e-02 -0.105 0.0539 0.393 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -842144 sc-eQTL 3.15e-01 -0.0375 0.0372 0.393 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 836958 sc-eQTL 7.85e-01 -0.0203 0.0744 0.393 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -840914 sc-eQTL 5.17e-01 -0.0431 0.0663 0.393 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 909103 sc-eQTL 2.66e-02 0.184 0.0822 0.394 CD16_Mono LOneK1K
ENSG00000079950 STX7 -540773 sc-eQTL 5.28e-01 -0.0373 0.059 0.394 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -762340 sc-eQTL 4.43e-02 0.174 0.086 0.394 CD16_Mono LOneK1K
ENSG00000112282 MED23 344183 sc-eQTL 7.44e-01 -0.0276 0.0846 0.394 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -741630 sc-eQTL 4.01e-02 0.176 0.0852 0.394 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -791034 sc-eQTL 4.03e-02 -0.166 0.0803 0.394 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -842144 sc-eQTL 4.21e-01 -0.0277 0.0344 0.394 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 836958 sc-eQTL 8.72e-01 0.0141 0.0868 0.394 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -840914 sc-eQTL 9.25e-01 -0.0079 0.0836 0.394 CD16_Mono LOneK1K
ENSG00000079950 STX7 -540773 sc-eQTL 5.51e-01 -0.0412 0.069 0.392 NK_CD56dim LOneK1K
ENSG00000112282 MED23 344183 sc-eQTL 2.92e-01 0.0706 0.0668 0.392 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -791034 sc-eQTL 6.54e-01 -0.0392 0.0873 0.392 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -842144 sc-eQTL 3.28e-01 0.0349 0.0356 0.392 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 836958 sc-eQTL 5.09e-01 0.0488 0.0738 0.392 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 -741630 pQTL 0.0105 0.0912 0.0356 0.0 0.0 0.353
ENSG00000118523 CCN2 21053 pQTL 2.88e-10 0.134 0.021 0.0 0.0 0.353

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079819 \N 909103 2.6e-07 1.06e-07 3.31e-08 1.78e-07 9.91e-08 9.13e-08 1.39e-07 5.35e-08 1.37e-07 4.24e-08 1.63e-07 7.58e-08 1.23e-07 6.21e-08 4.84e-08 7.87e-08 5.1e-08 1.07e-07 5.19e-08 3.74e-08 1.05e-07 1.33e-07 1.29e-07 4.67e-08 1.32e-07 1.13e-07 1.13e-07 8.71e-08 1.03e-07 1.1e-07 9.75e-08 3.84e-08 2.74e-08 8.02e-08 9.14e-08 3.93e-08 4.85e-08 9.2e-08 8.19e-08 3.07e-08 3.16e-08 1.37e-07 4.01e-08 1.38e-08 8.03e-08 1.75e-08 1.26e-07 4.5e-09 5.04e-08