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Genes within 1Mb (chr6:131962674:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 899352 sc-eQTL 1.89e-03 -0.194 0.0616 0.393 B L1
ENSG00000079931 MOXD1 -438801 sc-eQTL 4.81e-01 -0.0648 0.0918 0.393 B L1
ENSG00000079950 STX7 -550524 sc-eQTL 7.89e-01 -0.00927 0.0347 0.393 B L1
ENSG00000112282 MED23 334432 sc-eQTL 1.50e-02 -0.167 0.0681 0.393 B L1
ENSG00000112303 VNN2 -800785 sc-eQTL 9.74e-01 0.00215 0.0652 0.393 B L1
ENSG00000112306 RPS12 -851895 sc-eQTL 5.10e-01 -0.026 0.0394 0.393 B L1
ENSG00000118507 AKAP7 827207 sc-eQTL 2.86e-01 -0.0872 0.0816 0.393 B L1
ENSG00000146409 SLC18B1 -850665 sc-eQTL 2.41e-01 -0.0971 0.0826 0.393 B L1
ENSG00000228495 LINC01013 -169214 sc-eQTL 1.44e-02 -0.132 0.0536 0.393 B L1
ENSG00000079819 EPB41L2 899352 sc-eQTL 2.34e-01 -0.0974 0.0815 0.393 CD4T L1
ENSG00000079950 STX7 -550524 sc-eQTL 2.70e-01 -0.0736 0.0666 0.393 CD4T L1
ENSG00000112282 MED23 334432 sc-eQTL 7.55e-01 -0.0166 0.053 0.393 CD4T L1
ENSG00000112303 VNN2 -800785 sc-eQTL 3.81e-01 0.0507 0.0577 0.393 CD4T L1
ENSG00000112306 RPS12 -851895 sc-eQTL 3.66e-01 0.0355 0.0392 0.393 CD4T L1
ENSG00000118507 AKAP7 827207 sc-eQTL 8.92e-02 0.121 0.0706 0.393 CD4T L1
ENSG00000146409 SLC18B1 -850665 sc-eQTL 4.32e-01 0.0625 0.0794 0.393 CD4T L1
ENSG00000079950 STX7 -550524 sc-eQTL 2.78e-01 -0.072 0.0662 0.393 CD8T L1
ENSG00000112282 MED23 334432 sc-eQTL 7.16e-01 0.0238 0.0654 0.393 CD8T L1
ENSG00000112303 VNN2 -800785 sc-eQTL 8.44e-01 0.0153 0.0775 0.393 CD8T L1
ENSG00000112306 RPS12 -851895 sc-eQTL 2.71e-01 0.0291 0.0264 0.393 CD8T L1
ENSG00000118507 AKAP7 827207 sc-eQTL 3.28e-01 0.0729 0.0743 0.393 CD8T L1
ENSG00000146409 SLC18B1 -850665 sc-eQTL 3.91e-01 0.0687 0.08 0.393 CD8T L1
ENSG00000079819 EPB41L2 899352 sc-eQTL 5.25e-01 0.0427 0.0671 0.403 DC L1
ENSG00000079950 STX7 -550524 sc-eQTL 4.04e-01 0.0495 0.0592 0.403 DC L1
ENSG00000093134 VNN3 -772091 sc-eQTL 2.51e-01 0.0844 0.0733 0.403 DC L1
ENSG00000112282 MED23 334432 sc-eQTL 3.85e-01 0.0749 0.0862 0.403 DC L1
ENSG00000112299 VNN1 -751381 sc-eQTL 2.72e-01 0.0873 0.0792 0.403 DC L1
ENSG00000112303 VNN2 -800785 sc-eQTL 5.22e-01 0.0544 0.0849 0.403 DC L1
ENSG00000112306 RPS12 -851895 sc-eQTL 4.61e-01 -0.0351 0.0476 0.403 DC L1
ENSG00000118507 AKAP7 827207 sc-eQTL 7.78e-01 -0.024 0.0849 0.403 DC L1
ENSG00000146409 SLC18B1 -850665 sc-eQTL 8.66e-01 -0.0127 0.0754 0.403 DC L1
ENSG00000079819 EPB41L2 899352 sc-eQTL 3.80e-02 0.157 0.075 0.393 Mono L1
ENSG00000079950 STX7 -550524 sc-eQTL 9.04e-01 -0.00547 0.0451 0.393 Mono L1
ENSG00000093134 VNN3 -772091 sc-eQTL 6.51e-01 -0.0351 0.0774 0.393 Mono L1
ENSG00000112282 MED23 334432 sc-eQTL 7.03e-02 0.133 0.073 0.393 Mono L1
ENSG00000112299 VNN1 -751381 sc-eQTL 8.02e-02 0.145 0.0828 0.393 Mono L1
ENSG00000112303 VNN2 -800785 sc-eQTL 1.03e-02 -0.15 0.0579 0.393 Mono L1
ENSG00000112306 RPS12 -851895 sc-eQTL 3.05e-01 -0.0361 0.0352 0.393 Mono L1
ENSG00000118507 AKAP7 827207 sc-eQTL 7.11e-01 -0.0271 0.073 0.393 Mono L1
ENSG00000146409 SLC18B1 -850665 sc-eQTL 2.89e-01 -0.074 0.0696 0.393 Mono L1
ENSG00000079950 STX7 -550524 sc-eQTL 5.77e-01 -0.0385 0.0688 0.393 NK L1
ENSG00000112282 MED23 334432 sc-eQTL 6.45e-01 0.029 0.0629 0.393 NK L1
ENSG00000112303 VNN2 -800785 sc-eQTL 6.83e-01 -0.035 0.0856 0.393 NK L1
ENSG00000112306 RPS12 -851895 sc-eQTL 2.91e-01 0.0375 0.0354 0.393 NK L1
ENSG00000118507 AKAP7 827207 sc-eQTL 9.17e-01 0.00784 0.0753 0.393 NK L1
ENSG00000079819 EPB41L2 899352 sc-eQTL 9.55e-01 -0.00418 0.0736 0.393 Other_T L1
ENSG00000079950 STX7 -550524 sc-eQTL 8.64e-01 -0.0114 0.0666 0.393 Other_T L1
ENSG00000112282 MED23 334432 sc-eQTL 9.55e-01 0.00473 0.0832 0.393 Other_T L1
ENSG00000112303 VNN2 -800785 sc-eQTL 1.15e-01 0.127 0.0801 0.393 Other_T L1
ENSG00000112306 RPS12 -851895 sc-eQTL 9.42e-02 0.0533 0.0317 0.393 Other_T L1
ENSG00000118507 AKAP7 827207 sc-eQTL 9.51e-01 0.00444 0.0727 0.393 Other_T L1
ENSG00000146409 SLC18B1 -850665 sc-eQTL 6.91e-01 -0.0348 0.0874 0.393 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 899352 sc-eQTL 6.42e-01 0.0383 0.0823 0.39 B_Activated L2
ENSG00000079931 MOXD1 -438801 sc-eQTL 6.53e-01 0.042 0.0934 0.39 B_Activated L2
ENSG00000079950 STX7 -550524 sc-eQTL 6.93e-01 -0.0347 0.0876 0.39 B_Activated L2
ENSG00000112282 MED23 334432 sc-eQTL 7.48e-02 -0.172 0.0962 0.39 B_Activated L2
ENSG00000112303 VNN2 -800785 sc-eQTL 1.92e-01 0.122 0.0928 0.39 B_Activated L2
ENSG00000112306 RPS12 -851895 sc-eQTL 1.88e-01 0.0656 0.0497 0.39 B_Activated L2
ENSG00000118507 AKAP7 827207 sc-eQTL 7.84e-02 0.17 0.0959 0.39 B_Activated L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 7.00e-01 -0.0338 0.0875 0.39 B_Activated L2
ENSG00000228495 LINC01013 -169214 sc-eQTL 4.62e-01 -0.0614 0.0833 0.39 B_Activated L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 4.00e-02 -0.175 0.0847 0.395 B_Intermediate L2
ENSG00000079931 MOXD1 -438801 sc-eQTL 7.74e-01 0.0238 0.0827 0.395 B_Intermediate L2
ENSG00000079950 STX7 -550524 sc-eQTL 1.41e-01 -0.0795 0.0539 0.395 B_Intermediate L2
ENSG00000112282 MED23 334432 sc-eQTL 1.76e-01 -0.111 0.082 0.395 B_Intermediate L2
ENSG00000112303 VNN2 -800785 sc-eQTL 8.40e-01 0.0165 0.0815 0.395 B_Intermediate L2
ENSG00000112306 RPS12 -851895 sc-eQTL 8.26e-01 -0.011 0.0499 0.395 B_Intermediate L2
ENSG00000118507 AKAP7 827207 sc-eQTL 6.72e-01 0.0354 0.0837 0.395 B_Intermediate L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 8.56e-01 0.0163 0.0899 0.395 B_Intermediate L2
ENSG00000228495 LINC01013 -169214 sc-eQTL 1.64e-01 0.106 0.0761 0.395 B_Intermediate L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 1.58e-02 -0.193 0.0792 0.394 B_Memory L2
ENSG00000079931 MOXD1 -438801 sc-eQTL 8.42e-01 0.0166 0.0832 0.394 B_Memory L2
ENSG00000079950 STX7 -550524 sc-eQTL 8.32e-01 0.0139 0.0653 0.394 B_Memory L2
ENSG00000112282 MED23 334432 sc-eQTL 3.26e-01 -0.0827 0.0839 0.394 B_Memory L2
ENSG00000112303 VNN2 -800785 sc-eQTL 8.85e-01 -0.0123 0.0854 0.394 B_Memory L2
ENSG00000112306 RPS12 -851895 sc-eQTL 6.49e-01 0.0188 0.0411 0.394 B_Memory L2
ENSG00000118507 AKAP7 827207 sc-eQTL 1.36e-01 0.13 0.0871 0.394 B_Memory L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 3.83e-01 -0.075 0.0857 0.394 B_Memory L2
ENSG00000228495 LINC01013 -169214 sc-eQTL 5.66e-01 -0.0459 0.08 0.394 B_Memory L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 1.44e-01 -0.104 0.0708 0.393 B_Naive1 L2
ENSG00000079931 MOXD1 -438801 sc-eQTL 7.60e-01 -0.0296 0.0967 0.393 B_Naive1 L2
ENSG00000079950 STX7 -550524 sc-eQTL 7.07e-01 -0.0159 0.0423 0.393 B_Naive1 L2
ENSG00000112282 MED23 334432 sc-eQTL 4.40e-02 -0.152 0.075 0.393 B_Naive1 L2
ENSG00000112303 VNN2 -800785 sc-eQTL 8.56e-01 0.0149 0.0821 0.393 B_Naive1 L2
ENSG00000112306 RPS12 -851895 sc-eQTL 2.15e-01 -0.058 0.0466 0.393 B_Naive1 L2
ENSG00000118507 AKAP7 827207 sc-eQTL 4.32e-01 -0.0745 0.0946 0.393 B_Naive1 L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 8.13e-02 -0.157 0.0896 0.393 B_Naive1 L2
ENSG00000228495 LINC01013 -169214 sc-eQTL 2.05e-02 -0.138 0.059 0.393 B_Naive1 L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 2.25e-02 -0.182 0.0791 0.393 B_Naive2 L2
ENSG00000079931 MOXD1 -438801 sc-eQTL 7.01e-01 -0.0349 0.0907 0.393 B_Naive2 L2
ENSG00000079950 STX7 -550524 sc-eQTL 3.28e-01 0.0484 0.0493 0.393 B_Naive2 L2
ENSG00000112282 MED23 334432 sc-eQTL 9.31e-01 -0.00793 0.0913 0.393 B_Naive2 L2
ENSG00000112303 VNN2 -800785 sc-eQTL 3.27e-01 -0.0889 0.0906 0.393 B_Naive2 L2
ENSG00000112306 RPS12 -851895 sc-eQTL 3.24e-01 -0.0475 0.048 0.393 B_Naive2 L2
ENSG00000118507 AKAP7 827207 sc-eQTL 5.63e-02 -0.183 0.0952 0.393 B_Naive2 L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 2.27e-01 -0.111 0.0914 0.393 B_Naive2 L2
ENSG00000228495 LINC01013 -169214 sc-eQTL 1.15e-02 -0.16 0.0626 0.393 B_Naive2 L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 3.19e-01 -0.0734 0.0734 0.398 CD4_CTL L2
ENSG00000079950 STX7 -550524 sc-eQTL 3.57e-01 -0.0836 0.0905 0.398 CD4_CTL L2
ENSG00000112282 MED23 334432 sc-eQTL 4.84e-01 -0.066 0.0942 0.398 CD4_CTL L2
ENSG00000112303 VNN2 -800785 sc-eQTL 6.25e-01 0.0447 0.0914 0.398 CD4_CTL L2
ENSG00000112306 RPS12 -851895 sc-eQTL 8.91e-01 -0.00577 0.0423 0.398 CD4_CTL L2
ENSG00000118507 AKAP7 827207 sc-eQTL 6.86e-01 -0.0366 0.0904 0.398 CD4_CTL L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 5.75e-01 0.0479 0.0852 0.398 CD4_CTL L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 5.96e-01 -0.0454 0.0854 0.393 CD4_Naive L2
ENSG00000079950 STX7 -550524 sc-eQTL 6.86e-01 -0.0293 0.0725 0.393 CD4_Naive L2
ENSG00000112282 MED23 334432 sc-eQTL 8.80e-01 0.00938 0.0619 0.393 CD4_Naive L2
ENSG00000112303 VNN2 -800785 sc-eQTL 6.25e-01 0.0328 0.0672 0.393 CD4_Naive L2
ENSG00000112306 RPS12 -851895 sc-eQTL 5.18e-01 0.0282 0.0436 0.393 CD4_Naive L2
ENSG00000118507 AKAP7 827207 sc-eQTL 1.07e-01 0.13 0.0805 0.393 CD4_Naive L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 4.08e-01 0.0694 0.0838 0.393 CD4_Naive L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 8.95e-03 -0.227 0.0861 0.393 CD4_TCM L2
ENSG00000079950 STX7 -550524 sc-eQTL 6.97e-02 -0.145 0.0793 0.393 CD4_TCM L2
ENSG00000112282 MED23 334432 sc-eQTL 7.08e-01 -0.0253 0.0672 0.393 CD4_TCM L2
ENSG00000112303 VNN2 -800785 sc-eQTL 7.49e-01 -0.0253 0.0788 0.393 CD4_TCM L2
ENSG00000112306 RPS12 -851895 sc-eQTL 6.65e-01 0.0177 0.0408 0.393 CD4_TCM L2
ENSG00000118507 AKAP7 827207 sc-eQTL 1.60e-01 0.11 0.0777 0.393 CD4_TCM L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 8.16e-01 0.0221 0.0946 0.393 CD4_TCM L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 7.81e-02 0.159 0.09 0.393 CD4_TEM L2
ENSG00000079950 STX7 -550524 sc-eQTL 3.99e-01 -0.0765 0.0905 0.393 CD4_TEM L2
ENSG00000112282 MED23 334432 sc-eQTL 8.53e-01 -0.0155 0.0835 0.393 CD4_TEM L2
ENSG00000112303 VNN2 -800785 sc-eQTL 9.81e-01 -0.00207 0.087 0.393 CD4_TEM L2
ENSG00000112306 RPS12 -851895 sc-eQTL 5.19e-01 0.0231 0.0357 0.393 CD4_TEM L2
ENSG00000118507 AKAP7 827207 sc-eQTL 7.39e-01 -0.0306 0.0917 0.393 CD4_TEM L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 2.11e-01 0.111 0.0884 0.393 CD4_TEM L2
ENSG00000079950 STX7 -550524 sc-eQTL 8.49e-01 0.0144 0.0757 0.393 CD8_CTL L2
ENSG00000112282 MED23 334432 sc-eQTL 1.57e-01 -0.11 0.0772 0.393 CD8_CTL L2
ENSG00000112303 VNN2 -800785 sc-eQTL 7.07e-01 -0.0323 0.086 0.393 CD8_CTL L2
ENSG00000112306 RPS12 -851895 sc-eQTL 2.84e-01 0.0494 0.0459 0.393 CD8_CTL L2
ENSG00000118507 AKAP7 827207 sc-eQTL 6.97e-01 0.0338 0.0868 0.393 CD8_CTL L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 5.69e-01 0.0509 0.0892 0.393 CD8_CTL L2
ENSG00000079950 STX7 -550524 sc-eQTL 1.10e-01 -0.146 0.091 0.393 CD8_Naive L2
ENSG00000112282 MED23 334432 sc-eQTL 1.97e-01 0.0949 0.0733 0.393 CD8_Naive L2
ENSG00000112303 VNN2 -800785 sc-eQTL 3.51e-01 0.0736 0.0788 0.393 CD8_Naive L2
ENSG00000112306 RPS12 -851895 sc-eQTL 9.10e-01 0.00511 0.0452 0.393 CD8_Naive L2
ENSG00000118507 AKAP7 827207 sc-eQTL 7.09e-01 -0.0311 0.0831 0.393 CD8_Naive L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 9.90e-01 -0.00112 0.0907 0.393 CD8_Naive L2
ENSG00000079950 STX7 -550524 sc-eQTL 5.43e-01 0.0538 0.0884 0.394 CD8_TCM L2
ENSG00000112282 MED23 334432 sc-eQTL 7.01e-01 -0.0341 0.0888 0.394 CD8_TCM L2
ENSG00000112303 VNN2 -800785 sc-eQTL 5.26e-01 -0.0557 0.0877 0.394 CD8_TCM L2
ENSG00000112306 RPS12 -851895 sc-eQTL 9.33e-01 0.0036 0.0428 0.394 CD8_TCM L2
ENSG00000118507 AKAP7 827207 sc-eQTL 6.43e-01 -0.0442 0.0953 0.394 CD8_TCM L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 2.98e-01 0.0975 0.0935 0.394 CD8_TCM L2
ENSG00000079950 STX7 -550524 sc-eQTL 7.12e-01 -0.0345 0.0931 0.384 CD8_TEM L2
ENSG00000112282 MED23 334432 sc-eQTL 5.99e-01 -0.0472 0.0896 0.384 CD8_TEM L2
ENSG00000112303 VNN2 -800785 sc-eQTL 1.84e-01 -0.123 0.0922 0.384 CD8_TEM L2
ENSG00000112306 RPS12 -851895 sc-eQTL 8.41e-02 -0.0858 0.0494 0.384 CD8_TEM L2
ENSG00000118507 AKAP7 827207 sc-eQTL 4.03e-02 0.186 0.0902 0.384 CD8_TEM L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 4.29e-01 0.0745 0.094 0.384 CD8_TEM L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 4.26e-01 0.0655 0.0821 0.392 MAIT L2
ENSG00000079950 STX7 -550524 sc-eQTL 9.01e-01 -0.0106 0.0857 0.392 MAIT L2
ENSG00000112282 MED23 334432 sc-eQTL 8.64e-01 0.0153 0.0896 0.392 MAIT L2
ENSG00000112303 VNN2 -800785 sc-eQTL 1.13e-01 0.138 0.0866 0.392 MAIT L2
ENSG00000112306 RPS12 -851895 sc-eQTL 4.52e-01 0.0322 0.0428 0.392 MAIT L2
ENSG00000118507 AKAP7 827207 sc-eQTL 7.68e-01 -0.0261 0.0885 0.392 MAIT L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 3.87e-01 -0.0777 0.0897 0.392 MAIT L2
ENSG00000079950 STX7 -550524 sc-eQTL 4.71e-01 -0.0646 0.0896 0.396 NK_CD56bright L2
ENSG00000112282 MED23 334432 sc-eQTL 3.41e-01 -0.0904 0.0946 0.396 NK_CD56bright L2
ENSG00000112303 VNN2 -800785 sc-eQTL 4.48e-01 0.0691 0.0909 0.396 NK_CD56bright L2
ENSG00000112306 RPS12 -851895 sc-eQTL 4.39e-01 0.0393 0.0507 0.396 NK_CD56bright L2
ENSG00000118507 AKAP7 827207 sc-eQTL 8.70e-02 -0.157 0.0913 0.396 NK_CD56bright L2
ENSG00000079950 STX7 -550524 sc-eQTL 9.22e-01 -0.00719 0.0734 0.392 NK_CD56dim L2
ENSG00000112282 MED23 334432 sc-eQTL 5.63e-02 0.144 0.0748 0.392 NK_CD56dim L2
ENSG00000112303 VNN2 -800785 sc-eQTL 4.53e-01 -0.0689 0.0917 0.392 NK_CD56dim L2
ENSG00000112306 RPS12 -851895 sc-eQTL 3.53e-01 0.0339 0.0363 0.392 NK_CD56dim L2
ENSG00000118507 AKAP7 827207 sc-eQTL 5.39e-01 0.0492 0.08 0.392 NK_CD56dim L2
ENSG00000079950 STX7 -550524 sc-eQTL 3.41e-01 -0.0851 0.0892 0.395 NK_HLA L2
ENSG00000112282 MED23 334432 sc-eQTL 9.75e-01 0.00287 0.0904 0.395 NK_HLA L2
ENSG00000112303 VNN2 -800785 sc-eQTL 2.41e-01 -0.106 0.0902 0.395 NK_HLA L2
ENSG00000112306 RPS12 -851895 sc-eQTL 5.16e-02 0.0818 0.0418 0.395 NK_HLA L2
ENSG00000118507 AKAP7 827207 sc-eQTL 1.42e-01 0.137 0.0932 0.395 NK_HLA L2
ENSG00000079950 STX7 -550524 sc-eQTL 6.96e-01 -0.0308 0.0788 0.392 NK_cytokine L2
ENSG00000112282 MED23 334432 sc-eQTL 3.62e-01 -0.0742 0.0813 0.392 NK_cytokine L2
ENSG00000112303 VNN2 -800785 sc-eQTL 8.36e-01 -0.0183 0.0886 0.392 NK_cytokine L2
ENSG00000112306 RPS12 -851895 sc-eQTL 3.03e-01 0.0495 0.0479 0.392 NK_cytokine L2
ENSG00000118507 AKAP7 827207 sc-eQTL 5.62e-01 0.0477 0.0822 0.392 NK_cytokine L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 7.46e-01 -0.0388 0.12 0.367 PB L2
ENSG00000079931 MOXD1 -438801 sc-eQTL 2.07e-01 0.125 0.0988 0.367 PB L2
ENSG00000079950 STX7 -550524 sc-eQTL 4.05e-01 0.0693 0.0828 0.367 PB L2
ENSG00000112282 MED23 334432 sc-eQTL 9.73e-01 -0.00382 0.113 0.367 PB L2
ENSG00000112303 VNN2 -800785 sc-eQTL 5.16e-01 0.0661 0.101 0.367 PB L2
ENSG00000112306 RPS12 -851895 sc-eQTL 6.22e-02 -0.107 0.0567 0.367 PB L2
ENSG00000118507 AKAP7 827207 sc-eQTL 9.98e-02 -0.18 0.109 0.367 PB L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 9.43e-01 0.00771 0.108 0.367 PB L2
ENSG00000228495 LINC01013 -169214 sc-eQTL 7.96e-01 0.0184 0.071 0.367 PB L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 5.46e-01 0.0477 0.0788 0.398 Pro_T L2
ENSG00000079950 STX7 -550524 sc-eQTL 2.65e-01 0.0908 0.0813 0.398 Pro_T L2
ENSG00000112282 MED23 334432 sc-eQTL 6.47e-01 0.0421 0.0917 0.398 Pro_T L2
ENSG00000112303 VNN2 -800785 sc-eQTL 4.99e-01 0.0593 0.0874 0.398 Pro_T L2
ENSG00000112306 RPS12 -851895 sc-eQTL 6.79e-01 0.0137 0.0331 0.398 Pro_T L2
ENSG00000118507 AKAP7 827207 sc-eQTL 9.70e-01 0.00295 0.0787 0.398 Pro_T L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 9.47e-01 -0.00566 0.0857 0.398 Pro_T L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 5.84e-01 0.0485 0.0883 0.393 Treg L2
ENSG00000079950 STX7 -550524 sc-eQTL 6.28e-01 -0.0429 0.0884 0.393 Treg L2
ENSG00000112282 MED23 334432 sc-eQTL 9.03e-01 0.0111 0.0909 0.393 Treg L2
ENSG00000112303 VNN2 -800785 sc-eQTL 4.18e-01 0.0602 0.0743 0.393 Treg L2
ENSG00000112306 RPS12 -851895 sc-eQTL 4.90e-01 0.0227 0.0329 0.393 Treg L2
ENSG00000118507 AKAP7 827207 sc-eQTL 1.69e-01 0.108 0.078 0.393 Treg L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 1.06e-01 0.15 0.0924 0.393 Treg L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 9.88e-01 0.00113 0.0765 0.4 cDC L2
ENSG00000079950 STX7 -550524 sc-eQTL 4.37e-01 0.0593 0.076 0.4 cDC L2
ENSG00000093134 VNN3 -772091 sc-eQTL 7.45e-02 0.134 0.075 0.4 cDC L2
ENSG00000112282 MED23 334432 sc-eQTL 2.76e-01 0.107 0.098 0.4 cDC L2
ENSG00000112299 VNN1 -751381 sc-eQTL 7.65e-01 0.0266 0.0889 0.4 cDC L2
ENSG00000112303 VNN2 -800785 sc-eQTL 8.04e-01 0.0215 0.0866 0.4 cDC L2
ENSG00000112306 RPS12 -851895 sc-eQTL 4.49e-01 -0.0324 0.0427 0.4 cDC L2
ENSG00000118507 AKAP7 827207 sc-eQTL 1.16e-01 -0.15 0.0948 0.4 cDC L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 7.13e-01 -0.0312 0.0847 0.4 cDC L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 5.47e-02 0.157 0.081 0.393 cMono_IL1B L2
ENSG00000079950 STX7 -550524 sc-eQTL 6.73e-01 0.0243 0.0575 0.393 cMono_IL1B L2
ENSG00000093134 VNN3 -772091 sc-eQTL 5.95e-01 -0.0433 0.0812 0.393 cMono_IL1B L2
ENSG00000112282 MED23 334432 sc-eQTL 1.14e-01 0.127 0.0798 0.393 cMono_IL1B L2
ENSG00000112299 VNN1 -751381 sc-eQTL 5.80e-02 0.155 0.0813 0.393 cMono_IL1B L2
ENSG00000112303 VNN2 -800785 sc-eQTL 3.18e-01 -0.0655 0.0654 0.393 cMono_IL1B L2
ENSG00000112306 RPS12 -851895 sc-eQTL 4.68e-01 -0.0264 0.0364 0.393 cMono_IL1B L2
ENSG00000118507 AKAP7 827207 sc-eQTL 7.01e-01 0.0301 0.0782 0.393 cMono_IL1B L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 2.18e-01 -0.0864 0.07 0.393 cMono_IL1B L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 2.17e-01 0.106 0.086 0.393 cMono_S100A L2
ENSG00000079950 STX7 -550524 sc-eQTL 8.33e-01 -0.0133 0.0632 0.393 cMono_S100A L2
ENSG00000093134 VNN3 -772091 sc-eQTL 9.35e-01 0.00641 0.079 0.393 cMono_S100A L2
ENSG00000112282 MED23 334432 sc-eQTL 2.94e-01 0.09 0.0855 0.393 cMono_S100A L2
ENSG00000112299 VNN1 -751381 sc-eQTL 2.57e-02 0.19 0.0847 0.393 cMono_S100A L2
ENSG00000112303 VNN2 -800785 sc-eQTL 1.18e-01 -0.0876 0.0558 0.393 cMono_S100A L2
ENSG00000112306 RPS12 -851895 sc-eQTL 6.17e-01 -0.0203 0.0404 0.393 cMono_S100A L2
ENSG00000118507 AKAP7 827207 sc-eQTL 6.72e-01 -0.0356 0.0839 0.393 cMono_S100A L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 5.48e-01 0.045 0.0748 0.393 cMono_S100A L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 7.72e-01 -0.0273 0.0939 0.409 gdT L2
ENSG00000079950 STX7 -550524 sc-eQTL 4.97e-01 0.0669 0.0982 0.409 gdT L2
ENSG00000112282 MED23 334432 sc-eQTL 8.02e-01 0.0266 0.106 0.409 gdT L2
ENSG00000112303 VNN2 -800785 sc-eQTL 4.70e-01 0.0787 0.109 0.409 gdT L2
ENSG00000112306 RPS12 -851895 sc-eQTL 2.74e-01 0.0453 0.0413 0.409 gdT L2
ENSG00000118507 AKAP7 827207 sc-eQTL 6.29e-01 0.0532 0.11 0.409 gdT L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 4.49e-01 0.0812 0.107 0.409 gdT L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 4.16e-02 0.176 0.0857 0.391 intMono L2
ENSG00000079950 STX7 -550524 sc-eQTL 3.46e-01 -0.0793 0.0839 0.391 intMono L2
ENSG00000093134 VNN3 -772091 sc-eQTL 4.93e-01 -0.0582 0.0848 0.391 intMono L2
ENSG00000112282 MED23 334432 sc-eQTL 5.13e-01 -0.0611 0.0932 0.391 intMono L2
ENSG00000112299 VNN1 -751381 sc-eQTL 3.75e-04 0.294 0.0814 0.391 intMono L2
ENSG00000112303 VNN2 -800785 sc-eQTL 5.70e-01 -0.0485 0.0853 0.391 intMono L2
ENSG00000112306 RPS12 -851895 sc-eQTL 3.47e-01 -0.0349 0.037 0.391 intMono L2
ENSG00000118507 AKAP7 827207 sc-eQTL 5.66e-01 -0.0523 0.091 0.391 intMono L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 5.12e-01 -0.0593 0.0903 0.391 intMono L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 3.31e-01 0.0793 0.0813 0.398 ncMono L2
ENSG00000079950 STX7 -550524 sc-eQTL 6.86e-01 -0.0251 0.0621 0.398 ncMono L2
ENSG00000093134 VNN3 -772091 sc-eQTL 5.56e-02 0.167 0.0869 0.398 ncMono L2
ENSG00000112282 MED23 334432 sc-eQTL 4.26e-01 -0.0708 0.0887 0.398 ncMono L2
ENSG00000112299 VNN1 -751381 sc-eQTL 2.70e-01 0.0959 0.0868 0.398 ncMono L2
ENSG00000112303 VNN2 -800785 sc-eQTL 8.05e-02 -0.146 0.083 0.398 ncMono L2
ENSG00000112306 RPS12 -851895 sc-eQTL 5.72e-02 -0.0796 0.0416 0.398 ncMono L2
ENSG00000118507 AKAP7 827207 sc-eQTL 8.65e-01 0.0147 0.0861 0.398 ncMono L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 7.40e-01 0.0246 0.0741 0.398 ncMono L2
ENSG00000079819 EPB41L2 899352 sc-eQTL 6.34e-01 0.0471 0.0989 0.429 pDC L2
ENSG00000079950 STX7 -550524 sc-eQTL 5.98e-01 0.0377 0.0712 0.429 pDC L2
ENSG00000093134 VNN3 -772091 sc-eQTL 6.49e-01 0.0327 0.0717 0.429 pDC L2
ENSG00000112282 MED23 334432 sc-eQTL 7.57e-01 0.031 0.1 0.429 pDC L2
ENSG00000112299 VNN1 -751381 sc-eQTL 3.46e-01 0.0688 0.0728 0.429 pDC L2
ENSG00000112303 VNN2 -800785 sc-eQTL 5.67e-01 0.0497 0.0868 0.429 pDC L2
ENSG00000112306 RPS12 -851895 sc-eQTL 2.01e-01 -0.0764 0.0595 0.429 pDC L2
ENSG00000118507 AKAP7 827207 sc-eQTL 7.28e-01 0.0284 0.0816 0.429 pDC L2
ENSG00000146409 SLC18B1 -850665 sc-eQTL 6.68e-02 -0.162 0.0876 0.429 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 899352 sc-eQTL 7.48e-03 -0.209 0.0774 0.393 B_Memory LOneK1K
ENSG00000079931 MOXD1 -438801 sc-eQTL 7.20e-01 0.032 0.0891 0.393 B_Memory LOneK1K
ENSG00000079950 STX7 -550524 sc-eQTL 3.20e-01 -0.0502 0.0504 0.393 B_Memory LOneK1K
ENSG00000112282 MED23 334432 sc-eQTL 3.14e-03 -0.226 0.0757 0.393 B_Memory LOneK1K
ENSG00000112303 VNN2 -800785 sc-eQTL 7.20e-01 0.0287 0.0799 0.393 B_Memory LOneK1K
ENSG00000112306 RPS12 -851895 sc-eQTL 8.96e-01 0.00598 0.0455 0.393 B_Memory LOneK1K
ENSG00000118507 AKAP7 827207 sc-eQTL 4.30e-01 0.0621 0.0785 0.393 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -850665 sc-eQTL 7.50e-01 -0.0266 0.0835 0.393 B_Memory LOneK1K
ENSG00000228495 LINC01013 -169214 sc-eQTL 6.17e-01 0.0403 0.0806 0.393 B_Memory LOneK1K
ENSG00000079819 EPB41L2 899352 sc-eQTL 3.70e-03 -0.192 0.0655 0.393 B_Naive LOneK1K
ENSG00000079931 MOXD1 -438801 sc-eQTL 5.13e-01 -0.0627 0.0957 0.393 B_Naive LOneK1K
ENSG00000079950 STX7 -550524 sc-eQTL 8.86e-01 -0.00566 0.0393 0.393 B_Naive LOneK1K
ENSG00000112282 MED23 334432 sc-eQTL 4.44e-02 -0.148 0.0731 0.393 B_Naive LOneK1K
ENSG00000112303 VNN2 -800785 sc-eQTL 6.65e-01 -0.0331 0.0763 0.393 B_Naive LOneK1K
ENSG00000112306 RPS12 -851895 sc-eQTL 1.41e-01 -0.0679 0.046 0.393 B_Naive LOneK1K
ENSG00000118507 AKAP7 827207 sc-eQTL 1.89e-01 -0.122 0.0927 0.393 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -850665 sc-eQTL 9.58e-02 -0.145 0.0866 0.393 B_Naive LOneK1K
ENSG00000228495 LINC01013 -169214 sc-eQTL 2.78e-03 -0.164 0.0542 0.393 B_Naive LOneK1K
ENSG00000079819 EPB41L2 899352 sc-eQTL 6.01e-02 0.148 0.0781 0.393 CD14_Mono LOneK1K
ENSG00000079950 STX7 -550524 sc-eQTL 8.86e-01 0.00696 0.0484 0.393 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -772091 sc-eQTL 5.67e-01 -0.0452 0.0789 0.393 CD14_Mono LOneK1K
ENSG00000112282 MED23 334432 sc-eQTL 6.05e-02 0.142 0.0752 0.393 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -751381 sc-eQTL 3.70e-02 0.171 0.0815 0.393 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -800785 sc-eQTL 5.20e-02 -0.105 0.0539 0.393 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -851895 sc-eQTL 3.15e-01 -0.0375 0.0372 0.393 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 827207 sc-eQTL 7.85e-01 -0.0203 0.0744 0.393 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -850665 sc-eQTL 5.17e-01 -0.0431 0.0663 0.393 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 899352 sc-eQTL 2.66e-02 0.184 0.0822 0.394 CD16_Mono LOneK1K
ENSG00000079950 STX7 -550524 sc-eQTL 5.28e-01 -0.0373 0.059 0.394 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -772091 sc-eQTL 4.43e-02 0.174 0.086 0.394 CD16_Mono LOneK1K
ENSG00000112282 MED23 334432 sc-eQTL 7.44e-01 -0.0276 0.0846 0.394 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -751381 sc-eQTL 4.01e-02 0.176 0.0852 0.394 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -800785 sc-eQTL 4.03e-02 -0.166 0.0803 0.394 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -851895 sc-eQTL 4.21e-01 -0.0277 0.0344 0.394 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 827207 sc-eQTL 8.72e-01 0.0141 0.0868 0.394 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -850665 sc-eQTL 9.25e-01 -0.0079 0.0836 0.394 CD16_Mono LOneK1K
ENSG00000079950 STX7 -550524 sc-eQTL 5.51e-01 -0.0412 0.069 0.392 NK_CD56dim LOneK1K
ENSG00000112282 MED23 334432 sc-eQTL 2.92e-01 0.0706 0.0668 0.392 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -800785 sc-eQTL 6.54e-01 -0.0392 0.0873 0.392 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -851895 sc-eQTL 3.28e-01 0.0349 0.0356 0.392 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 827207 sc-eQTL 5.09e-01 0.0488 0.0738 0.392 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112299 VNN1 -751381 pQTL 0.012 0.0892 0.0355 0.0 0.0 0.352
ENSG00000118523 CCN2 11302 pQTL 2.4e-10 0.134 0.021 0.0 0.0 0.352

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079819 \N 899352 2.91e-07 1.19e-07 3.35e-08 1.82e-07 8.83e-08 8.89e-08 1.6e-07 5.33e-08 1.41e-07 4.4e-08 1.62e-07 8.36e-08 1.33e-07 6.56e-08 6.12e-08 7.5e-08 3.9e-08 1.21e-07 5.21e-08 4.21e-08 1.04e-07 1.26e-07 1.44e-07 4.26e-08 1.37e-07 1.14e-07 1.06e-07 8.71e-08 1.08e-07 1.12e-07 9.73e-08 3.68e-08 3.3e-08 8.68e-08 7.51e-08 3.9e-08 5.11e-08 9.22e-08 7.92e-08 3.05e-08 4.41e-08 1.35e-07 4.89e-08 1.45e-08 7.91e-08 1.84e-08 1.23e-07 3.99e-09 4.77e-08