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Genes within 1Mb (chr6:131931380:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 868058 sc-eQTL 8.80e-01 0.00943 0.0623 0.393 B L1
ENSG00000079931 MOXD1 -470095 sc-eQTL 5.37e-01 -0.0561 0.0908 0.393 B L1
ENSG00000079950 STX7 -581818 sc-eQTL 2.94e-01 -0.036 0.0342 0.393 B L1
ENSG00000112282 MED23 303138 sc-eQTL 3.42e-01 -0.0649 0.0682 0.393 B L1
ENSG00000112303 VNN2 -832079 sc-eQTL 5.38e-01 0.0398 0.0644 0.393 B L1
ENSG00000112306 RPS12 -883189 sc-eQTL 1.59e-01 -0.0548 0.0388 0.393 B L1
ENSG00000118507 AKAP7 795913 sc-eQTL 9.34e-01 -0.00673 0.0809 0.393 B L1
ENSG00000146409 SLC18B1 -881959 sc-eQTL 4.06e-01 -0.0682 0.0819 0.393 B L1
ENSG00000228495 LINC01013 -200508 sc-eQTL 3.73e-01 0.048 0.0537 0.393 B L1
ENSG00000079819 EPB41L2 868058 sc-eQTL 2.89e-02 -0.176 0.0801 0.393 CD4T L1
ENSG00000079950 STX7 -581818 sc-eQTL 2.99e-01 -0.0687 0.0659 0.393 CD4T L1
ENSG00000112282 MED23 303138 sc-eQTL 7.79e-02 0.0922 0.0521 0.393 CD4T L1
ENSG00000112303 VNN2 -832079 sc-eQTL 2.49e-01 0.066 0.057 0.393 CD4T L1
ENSG00000112306 RPS12 -883189 sc-eQTL 2.52e-01 -0.0446 0.0388 0.393 CD4T L1
ENSG00000118507 AKAP7 795913 sc-eQTL 8.74e-01 0.0111 0.0703 0.393 CD4T L1
ENSG00000146409 SLC18B1 -881959 sc-eQTL 1.89e-02 -0.184 0.0777 0.393 CD4T L1
ENSG00000079950 STX7 -581818 sc-eQTL 7.89e-01 -0.0176 0.0655 0.393 CD8T L1
ENSG00000112282 MED23 303138 sc-eQTL 4.26e-01 -0.0514 0.0644 0.393 CD8T L1
ENSG00000112303 VNN2 -832079 sc-eQTL 8.21e-01 -0.0173 0.0765 0.393 CD8T L1
ENSG00000112306 RPS12 -883189 sc-eQTL 8.69e-01 -0.00433 0.0261 0.393 CD8T L1
ENSG00000118507 AKAP7 795913 sc-eQTL 9.18e-01 0.00755 0.0735 0.393 CD8T L1
ENSG00000146409 SLC18B1 -881959 sc-eQTL 9.66e-01 0.00335 0.079 0.393 CD8T L1
ENSG00000079819 EPB41L2 868058 sc-eQTL 9.56e-01 -0.00376 0.0678 0.392 DC L1
ENSG00000079950 STX7 -581818 sc-eQTL 8.00e-01 -0.0152 0.0598 0.392 DC L1
ENSG00000093134 VNN3 -803385 sc-eQTL 2.89e-01 -0.0787 0.074 0.392 DC L1
ENSG00000112282 MED23 303138 sc-eQTL 3.70e-01 0.0781 0.0869 0.392 DC L1
ENSG00000112299 VNN1 -782675 sc-eQTL 8.79e-01 0.0122 0.0801 0.392 DC L1
ENSG00000112303 VNN2 -832079 sc-eQTL 8.34e-01 0.018 0.0857 0.392 DC L1
ENSG00000112306 RPS12 -883189 sc-eQTL 2.98e-01 -0.05 0.0479 0.392 DC L1
ENSG00000118507 AKAP7 795913 sc-eQTL 5.33e-01 -0.0535 0.0856 0.392 DC L1
ENSG00000146409 SLC18B1 -881959 sc-eQTL 4.26e-01 -0.0605 0.0759 0.392 DC L1
ENSG00000079819 EPB41L2 868058 sc-eQTL 1.54e-02 -0.182 0.0746 0.393 Mono L1
ENSG00000079950 STX7 -581818 sc-eQTL 5.81e-01 -0.0249 0.045 0.393 Mono L1
ENSG00000093134 VNN3 -803385 sc-eQTL 7.89e-01 -0.0207 0.0773 0.393 Mono L1
ENSG00000112282 MED23 303138 sc-eQTL 7.32e-01 -0.0252 0.0735 0.393 Mono L1
ENSG00000112299 VNN1 -782675 sc-eQTL 5.72e-01 0.0471 0.0832 0.393 Mono L1
ENSG00000112303 VNN2 -832079 sc-eQTL 8.52e-02 -0.101 0.0583 0.393 Mono L1
ENSG00000112306 RPS12 -883189 sc-eQTL 8.21e-01 0.00796 0.0352 0.393 Mono L1
ENSG00000118507 AKAP7 795913 sc-eQTL 5.84e-01 -0.0399 0.0729 0.393 Mono L1
ENSG00000146409 SLC18B1 -881959 sc-eQTL 5.11e-01 0.0458 0.0696 0.393 Mono L1
ENSG00000079950 STX7 -581818 sc-eQTL 6.15e-01 -0.0344 0.0683 0.393 NK L1
ENSG00000112282 MED23 303138 sc-eQTL 7.43e-01 0.0206 0.0625 0.393 NK L1
ENSG00000112303 VNN2 -832079 sc-eQTL 4.53e-01 -0.0639 0.085 0.393 NK L1
ENSG00000112306 RPS12 -883189 sc-eQTL 8.92e-01 -0.00479 0.0352 0.393 NK L1
ENSG00000118507 AKAP7 795913 sc-eQTL 1.60e-01 0.105 0.0745 0.393 NK L1
ENSG00000079819 EPB41L2 868058 sc-eQTL 9.52e-01 0.00453 0.0746 0.393 Other_T L1
ENSG00000079950 STX7 -581818 sc-eQTL 3.82e-02 -0.139 0.0668 0.393 Other_T L1
ENSG00000112282 MED23 303138 sc-eQTL 2.36e-01 -0.0998 0.084 0.393 Other_T L1
ENSG00000112303 VNN2 -832079 sc-eQTL 7.00e-01 -0.0315 0.0816 0.393 Other_T L1
ENSG00000112306 RPS12 -883189 sc-eQTL 7.25e-01 -0.0114 0.0324 0.393 Other_T L1
ENSG00000118507 AKAP7 795913 sc-eQTL 2.21e-01 0.0902 0.0734 0.393 Other_T L1
ENSG00000146409 SLC18B1 -881959 sc-eQTL 1.98e-03 -0.271 0.0867 0.393 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 868058 sc-eQTL 6.87e-03 -0.22 0.0802 0.411 B_Activated L2
ENSG00000079931 MOXD1 -470095 sc-eQTL 3.81e-01 -0.0815 0.0928 0.411 B_Activated L2
ENSG00000079950 STX7 -581818 sc-eQTL 5.88e-02 0.164 0.0863 0.411 B_Activated L2
ENSG00000112282 MED23 303138 sc-eQTL 9.95e-01 0.000607 0.0966 0.411 B_Activated L2
ENSG00000112303 VNN2 -832079 sc-eQTL 7.96e-01 -0.024 0.0928 0.411 B_Activated L2
ENSG00000112306 RPS12 -883189 sc-eQTL 2.25e-01 -0.0603 0.0495 0.411 B_Activated L2
ENSG00000118507 AKAP7 795913 sc-eQTL 9.42e-01 -0.00705 0.0963 0.411 B_Activated L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 9.51e-01 0.00531 0.0871 0.411 B_Activated L2
ENSG00000228495 LINC01013 -200508 sc-eQTL 5.84e-01 0.0456 0.083 0.411 B_Activated L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 7.42e-01 -0.0286 0.087 0.395 B_Intermediate L2
ENSG00000079931 MOXD1 -470095 sc-eQTL 7.48e-01 -0.027 0.0841 0.395 B_Intermediate L2
ENSG00000079950 STX7 -581818 sc-eQTL 2.56e-02 -0.122 0.0544 0.395 B_Intermediate L2
ENSG00000112282 MED23 303138 sc-eQTL 8.34e-01 0.0176 0.0838 0.395 B_Intermediate L2
ENSG00000112303 VNN2 -832079 sc-eQTL 7.40e-01 -0.0276 0.0829 0.395 B_Intermediate L2
ENSG00000112306 RPS12 -883189 sc-eQTL 3.84e-01 -0.0443 0.0507 0.395 B_Intermediate L2
ENSG00000118507 AKAP7 795913 sc-eQTL 4.86e-01 0.0593 0.0851 0.395 B_Intermediate L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 8.81e-01 0.0137 0.0915 0.395 B_Intermediate L2
ENSG00000228495 LINC01013 -200508 sc-eQTL 7.85e-01 0.0212 0.0778 0.395 B_Intermediate L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 1.84e-01 0.107 0.0806 0.39 B_Memory L2
ENSG00000079931 MOXD1 -470095 sc-eQTL 5.02e-01 -0.0564 0.0838 0.39 B_Memory L2
ENSG00000079950 STX7 -581818 sc-eQTL 8.77e-01 0.0102 0.0658 0.39 B_Memory L2
ENSG00000112282 MED23 303138 sc-eQTL 2.64e-01 -0.0946 0.0845 0.39 B_Memory L2
ENSG00000112303 VNN2 -832079 sc-eQTL 8.31e-01 0.0184 0.0861 0.39 B_Memory L2
ENSG00000112306 RPS12 -883189 sc-eQTL 8.12e-01 0.00989 0.0415 0.39 B_Memory L2
ENSG00000118507 AKAP7 795913 sc-eQTL 9.63e-02 -0.147 0.0877 0.39 B_Memory L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 5.05e-03 -0.241 0.0849 0.39 B_Memory L2
ENSG00000228495 LINC01013 -200508 sc-eQTL 1.72e-01 0.11 0.0803 0.39 B_Memory L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 8.40e-01 -0.0144 0.0712 0.393 B_Naive1 L2
ENSG00000079931 MOXD1 -470095 sc-eQTL 4.49e-01 -0.0733 0.0966 0.393 B_Naive1 L2
ENSG00000079950 STX7 -581818 sc-eQTL 3.84e-01 -0.0368 0.0422 0.393 B_Naive1 L2
ENSG00000112282 MED23 303138 sc-eQTL 3.00e-01 -0.0785 0.0756 0.393 B_Naive1 L2
ENSG00000112303 VNN2 -832079 sc-eQTL 2.24e-01 0.0998 0.0818 0.393 B_Naive1 L2
ENSG00000112306 RPS12 -883189 sc-eQTL 4.33e-02 -0.0942 0.0463 0.393 B_Naive1 L2
ENSG00000118507 AKAP7 795913 sc-eQTL 7.53e-01 0.0299 0.0948 0.393 B_Naive1 L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 5.60e-01 0.0527 0.0902 0.393 B_Naive1 L2
ENSG00000228495 LINC01013 -200508 sc-eQTL 1.53e-01 0.0853 0.0595 0.393 B_Naive1 L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 7.25e-01 0.0285 0.0808 0.391 B_Naive2 L2
ENSG00000079931 MOXD1 -470095 sc-eQTL 2.87e-01 0.0975 0.0913 0.391 B_Naive2 L2
ENSG00000079950 STX7 -581818 sc-eQTL 8.34e-01 -0.0105 0.0499 0.391 B_Naive2 L2
ENSG00000112282 MED23 303138 sc-eQTL 5.83e-02 0.174 0.0914 0.391 B_Naive2 L2
ENSG00000112303 VNN2 -832079 sc-eQTL 3.74e-01 0.0814 0.0914 0.391 B_Naive2 L2
ENSG00000112306 RPS12 -883189 sc-eQTL 2.88e-01 -0.0515 0.0484 0.391 B_Naive2 L2
ENSG00000118507 AKAP7 795913 sc-eQTL 4.06e-01 -0.0804 0.0967 0.391 B_Naive2 L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 1.49e-01 -0.133 0.0921 0.391 B_Naive2 L2
ENSG00000228495 LINC01013 -200508 sc-eQTL 9.40e-01 0.00483 0.0641 0.391 B_Naive2 L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 2.93e-01 -0.0763 0.0724 0.386 CD4_CTL L2
ENSG00000079950 STX7 -581818 sc-eQTL 2.75e-01 0.0977 0.0892 0.386 CD4_CTL L2
ENSG00000112282 MED23 303138 sc-eQTL 9.88e-01 -0.00135 0.0931 0.386 CD4_CTL L2
ENSG00000112303 VNN2 -832079 sc-eQTL 1.98e-01 -0.116 0.0899 0.386 CD4_CTL L2
ENSG00000112306 RPS12 -883189 sc-eQTL 5.10e-01 -0.0275 0.0417 0.386 CD4_CTL L2
ENSG00000118507 AKAP7 795913 sc-eQTL 1.76e-01 -0.121 0.0888 0.386 CD4_CTL L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 8.57e-01 -0.0152 0.0841 0.386 CD4_CTL L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 1.92e-02 -0.196 0.083 0.393 CD4_Naive L2
ENSG00000079950 STX7 -581818 sc-eQTL 4.19e-02 -0.145 0.0707 0.393 CD4_Naive L2
ENSG00000112282 MED23 303138 sc-eQTL 9.13e-01 0.00666 0.061 0.393 CD4_Naive L2
ENSG00000112303 VNN2 -832079 sc-eQTL 1.62e-01 0.0925 0.0659 0.393 CD4_Naive L2
ENSG00000112306 RPS12 -883189 sc-eQTL 1.99e-01 -0.0551 0.0428 0.393 CD4_Naive L2
ENSG00000118507 AKAP7 795913 sc-eQTL 6.70e-01 0.034 0.0797 0.393 CD4_Naive L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 2.08e-02 -0.19 0.0816 0.393 CD4_Naive L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 9.69e-01 0.00337 0.0859 0.393 CD4_TCM L2
ENSG00000079950 STX7 -581818 sc-eQTL 9.60e-01 -0.00392 0.0784 0.393 CD4_TCM L2
ENSG00000112282 MED23 303138 sc-eQTL 1.22e-01 0.102 0.0656 0.393 CD4_TCM L2
ENSG00000112303 VNN2 -832079 sc-eQTL 8.10e-01 0.0186 0.0773 0.393 CD4_TCM L2
ENSG00000112306 RPS12 -883189 sc-eQTL 4.19e-01 -0.0324 0.04 0.393 CD4_TCM L2
ENSG00000118507 AKAP7 795913 sc-eQTL 5.30e-01 -0.0481 0.0765 0.393 CD4_TCM L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 4.99e-01 -0.0628 0.0927 0.393 CD4_TCM L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 6.26e-01 -0.044 0.0903 0.393 CD4_TEM L2
ENSG00000079950 STX7 -581818 sc-eQTL 7.26e-01 0.0317 0.0903 0.393 CD4_TEM L2
ENSG00000112282 MED23 303138 sc-eQTL 8.25e-01 -0.0184 0.0832 0.393 CD4_TEM L2
ENSG00000112303 VNN2 -832079 sc-eQTL 9.98e-01 0.000183 0.0867 0.393 CD4_TEM L2
ENSG00000112306 RPS12 -883189 sc-eQTL 3.02e-01 -0.0367 0.0355 0.393 CD4_TEM L2
ENSG00000118507 AKAP7 795913 sc-eQTL 2.77e-01 -0.0994 0.0911 0.393 CD4_TEM L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 4.70e-03 -0.248 0.0867 0.393 CD4_TEM L2
ENSG00000079950 STX7 -581818 sc-eQTL 7.98e-01 0.0191 0.0746 0.393 CD8_CTL L2
ENSG00000112282 MED23 303138 sc-eQTL 2.62e-01 0.0858 0.0762 0.393 CD8_CTL L2
ENSG00000112303 VNN2 -832079 sc-eQTL 9.81e-01 0.00201 0.0848 0.393 CD8_CTL L2
ENSG00000112306 RPS12 -883189 sc-eQTL 8.59e-01 -0.00808 0.0454 0.393 CD8_CTL L2
ENSG00000118507 AKAP7 795913 sc-eQTL 9.50e-01 -0.00536 0.0855 0.393 CD8_CTL L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 8.11e-01 0.021 0.0879 0.393 CD8_CTL L2
ENSG00000079950 STX7 -581818 sc-eQTL 3.68e-01 -0.0813 0.0901 0.393 CD8_Naive L2
ENSG00000112282 MED23 303138 sc-eQTL 2.70e-01 -0.08 0.0724 0.393 CD8_Naive L2
ENSG00000112303 VNN2 -832079 sc-eQTL 8.34e-01 -0.0163 0.0779 0.393 CD8_Naive L2
ENSG00000112306 RPS12 -883189 sc-eQTL 8.69e-01 0.00737 0.0446 0.393 CD8_Naive L2
ENSG00000118507 AKAP7 795913 sc-eQTL 9.33e-01 0.0069 0.0819 0.393 CD8_Naive L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 4.54e-01 -0.0671 0.0893 0.393 CD8_Naive L2
ENSG00000079950 STX7 -581818 sc-eQTL 7.83e-01 -0.025 0.0905 0.391 CD8_TCM L2
ENSG00000112282 MED23 303138 sc-eQTL 7.48e-01 0.0293 0.0909 0.391 CD8_TCM L2
ENSG00000112303 VNN2 -832079 sc-eQTL 5.08e-01 0.0596 0.0898 0.391 CD8_TCM L2
ENSG00000112306 RPS12 -883189 sc-eQTL 7.39e-01 -0.0146 0.0438 0.391 CD8_TCM L2
ENSG00000118507 AKAP7 795913 sc-eQTL 3.09e-01 0.0992 0.0973 0.391 CD8_TCM L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 8.81e-01 0.0144 0.096 0.391 CD8_TCM L2
ENSG00000079950 STX7 -581818 sc-eQTL 9.55e-01 0.00534 0.0947 0.39 CD8_TEM L2
ENSG00000112282 MED23 303138 sc-eQTL 5.84e-01 -0.05 0.0911 0.39 CD8_TEM L2
ENSG00000112303 VNN2 -832079 sc-eQTL 9.67e-01 0.00389 0.0942 0.39 CD8_TEM L2
ENSG00000112306 RPS12 -883189 sc-eQTL 5.72e-01 0.0287 0.0506 0.39 CD8_TEM L2
ENSG00000118507 AKAP7 795913 sc-eQTL 5.30e-01 -0.0582 0.0926 0.39 CD8_TEM L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 9.61e-01 0.00468 0.0958 0.39 CD8_TEM L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 8.36e-01 0.0172 0.0833 0.392 MAIT L2
ENSG00000079950 STX7 -581818 sc-eQTL 4.38e-01 -0.0673 0.0866 0.392 MAIT L2
ENSG00000112282 MED23 303138 sc-eQTL 3.66e-01 -0.082 0.0905 0.392 MAIT L2
ENSG00000112303 VNN2 -832079 sc-eQTL 3.86e-01 -0.0765 0.088 0.392 MAIT L2
ENSG00000112306 RPS12 -883189 sc-eQTL 6.49e-01 -0.0197 0.0434 0.392 MAIT L2
ENSG00000118507 AKAP7 795913 sc-eQTL 1.17e-01 0.14 0.0891 0.392 MAIT L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 1.20e-01 -0.141 0.0904 0.392 MAIT L2
ENSG00000079950 STX7 -581818 sc-eQTL 8.83e-01 -0.0132 0.0895 0.393 NK_CD56bright L2
ENSG00000112282 MED23 303138 sc-eQTL 9.26e-01 0.00878 0.0946 0.393 NK_CD56bright L2
ENSG00000112303 VNN2 -832079 sc-eQTL 3.05e-01 -0.0931 0.0906 0.393 NK_CD56bright L2
ENSG00000112306 RPS12 -883189 sc-eQTL 3.32e-01 0.0491 0.0505 0.393 NK_CD56bright L2
ENSG00000118507 AKAP7 795913 sc-eQTL 4.02e-01 -0.077 0.0916 0.393 NK_CD56bright L2
ENSG00000079950 STX7 -581818 sc-eQTL 2.97e-01 -0.0764 0.0731 0.392 NK_CD56dim L2
ENSG00000112282 MED23 303138 sc-eQTL 5.10e-01 0.0497 0.0752 0.392 NK_CD56dim L2
ENSG00000112303 VNN2 -832079 sc-eQTL 3.56e-01 -0.0847 0.0915 0.392 NK_CD56dim L2
ENSG00000112306 RPS12 -883189 sc-eQTL 8.93e-01 -0.00491 0.0364 0.392 NK_CD56dim L2
ENSG00000118507 AKAP7 795913 sc-eQTL 7.64e-01 0.0241 0.0799 0.392 NK_CD56dim L2
ENSG00000079950 STX7 -581818 sc-eQTL 9.81e-01 -0.00219 0.0918 0.39 NK_HLA L2
ENSG00000112282 MED23 303138 sc-eQTL 4.36e-01 -0.0723 0.0926 0.39 NK_HLA L2
ENSG00000112303 VNN2 -832079 sc-eQTL 5.79e-02 -0.176 0.0921 0.39 NK_HLA L2
ENSG00000112306 RPS12 -883189 sc-eQTL 6.74e-01 -0.0182 0.0433 0.39 NK_HLA L2
ENSG00000118507 AKAP7 795913 sc-eQTL 4.73e-01 0.069 0.096 0.39 NK_HLA L2
ENSG00000079950 STX7 -581818 sc-eQTL 1.63e-01 -0.109 0.0781 0.392 NK_cytokine L2
ENSG00000112282 MED23 303138 sc-eQTL 5.49e-01 0.0487 0.0811 0.392 NK_cytokine L2
ENSG00000112303 VNN2 -832079 sc-eQTL 5.35e-01 0.0547 0.0881 0.392 NK_cytokine L2
ENSG00000112306 RPS12 -883189 sc-eQTL 2.42e-01 0.0559 0.0477 0.392 NK_cytokine L2
ENSG00000118507 AKAP7 795913 sc-eQTL 1.87e-01 0.108 0.0816 0.392 NK_cytokine L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 4.50e-01 0.0984 0.13 0.419 PB L2
ENSG00000079931 MOXD1 -470095 sc-eQTL 4.89e-01 -0.075 0.108 0.419 PB L2
ENSG00000079950 STX7 -581818 sc-eQTL 4.69e-01 0.0655 0.0901 0.419 PB L2
ENSG00000112282 MED23 303138 sc-eQTL 7.10e-01 -0.0458 0.123 0.419 PB L2
ENSG00000112303 VNN2 -832079 sc-eQTL 8.91e-01 0.0152 0.11 0.419 PB L2
ENSG00000112306 RPS12 -883189 sc-eQTL 2.39e-04 0.224 0.059 0.419 PB L2
ENSG00000118507 AKAP7 795913 sc-eQTL 2.87e-01 -0.127 0.119 0.419 PB L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 1.55e-01 -0.167 0.116 0.419 PB L2
ENSG00000228495 LINC01013 -200508 sc-eQTL 8.67e-01 0.0129 0.0772 0.419 PB L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 4.89e-01 0.0546 0.0788 0.389 Pro_T L2
ENSG00000079950 STX7 -581818 sc-eQTL 1.36e-01 -0.121 0.0811 0.389 Pro_T L2
ENSG00000112282 MED23 303138 sc-eQTL 1.82e-01 -0.122 0.0914 0.389 Pro_T L2
ENSG00000112303 VNN2 -832079 sc-eQTL 7.96e-01 -0.0226 0.0875 0.389 Pro_T L2
ENSG00000112306 RPS12 -883189 sc-eQTL 7.57e-01 -0.0102 0.0331 0.389 Pro_T L2
ENSG00000118507 AKAP7 795913 sc-eQTL 4.01e-01 0.0661 0.0785 0.389 Pro_T L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 1.57e-01 -0.121 0.0852 0.389 Pro_T L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 6.75e-01 -0.037 0.0883 0.393 Treg L2
ENSG00000079950 STX7 -581818 sc-eQTL 3.21e-01 0.0877 0.0882 0.393 Treg L2
ENSG00000112282 MED23 303138 sc-eQTL 1.13e-01 0.144 0.0903 0.393 Treg L2
ENSG00000112303 VNN2 -832079 sc-eQTL 8.69e-01 -0.0123 0.0744 0.393 Treg L2
ENSG00000112306 RPS12 -883189 sc-eQTL 6.06e-01 0.017 0.0329 0.393 Treg L2
ENSG00000118507 AKAP7 795913 sc-eQTL 1.12e-03 -0.252 0.0764 0.393 Treg L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 4.81e-01 -0.0655 0.0928 0.393 Treg L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 8.62e-01 -0.0134 0.0771 0.385 cDC L2
ENSG00000079950 STX7 -581818 sc-eQTL 9.60e-01 -0.00382 0.0767 0.385 cDC L2
ENSG00000093134 VNN3 -803385 sc-eQTL 5.26e-01 -0.0483 0.0761 0.385 cDC L2
ENSG00000112282 MED23 303138 sc-eQTL 4.94e-01 0.0678 0.0989 0.385 cDC L2
ENSG00000112299 VNN1 -782675 sc-eQTL 8.48e-01 0.0172 0.0896 0.385 cDC L2
ENSG00000112303 VNN2 -832079 sc-eQTL 5.94e-01 -0.0465 0.0872 0.385 cDC L2
ENSG00000112306 RPS12 -883189 sc-eQTL 9.63e-01 -0.00202 0.0431 0.385 cDC L2
ENSG00000118507 AKAP7 795913 sc-eQTL 8.88e-01 -0.0135 0.0961 0.385 cDC L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 4.52e-01 -0.0642 0.0852 0.385 cDC L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 6.05e-03 -0.226 0.0814 0.393 cMono_IL1B L2
ENSG00000079950 STX7 -581818 sc-eQTL 3.74e-01 -0.0519 0.0582 0.393 cMono_IL1B L2
ENSG00000093134 VNN3 -803385 sc-eQTL 2.80e-01 -0.089 0.0822 0.393 cMono_IL1B L2
ENSG00000112282 MED23 303138 sc-eQTL 4.28e-01 0.0646 0.0814 0.393 cMono_IL1B L2
ENSG00000112299 VNN1 -782675 sc-eQTL 7.23e-01 0.0295 0.0831 0.393 cMono_IL1B L2
ENSG00000112303 VNN2 -832079 sc-eQTL 9.69e-02 -0.11 0.0661 0.393 cMono_IL1B L2
ENSG00000112306 RPS12 -883189 sc-eQTL 8.22e-01 -0.00833 0.0369 0.393 cMono_IL1B L2
ENSG00000118507 AKAP7 795913 sc-eQTL 9.70e-01 0.00295 0.0793 0.393 cMono_IL1B L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 6.44e-01 0.0329 0.0712 0.393 cMono_IL1B L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 8.36e-02 -0.147 0.0848 0.393 cMono_S100A L2
ENSG00000079950 STX7 -581818 sc-eQTL 8.30e-01 -0.0135 0.0626 0.393 cMono_S100A L2
ENSG00000093134 VNN3 -803385 sc-eQTL 6.05e-01 0.0404 0.0781 0.393 cMono_S100A L2
ENSG00000112282 MED23 303138 sc-eQTL 1.25e-01 -0.13 0.0844 0.393 cMono_S100A L2
ENSG00000112299 VNN1 -782675 sc-eQTL 5.91e-01 0.0456 0.0848 0.393 cMono_S100A L2
ENSG00000112303 VNN2 -832079 sc-eQTL 3.34e-01 -0.0536 0.0555 0.393 cMono_S100A L2
ENSG00000112306 RPS12 -883189 sc-eQTL 3.02e-01 0.0413 0.0399 0.393 cMono_S100A L2
ENSG00000118507 AKAP7 795913 sc-eQTL 9.51e-01 -0.00508 0.083 0.393 cMono_S100A L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 2.39e-01 0.0871 0.0738 0.393 cMono_S100A L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 4.94e-01 -0.0635 0.0926 0.4 gdT L2
ENSG00000079950 STX7 -581818 sc-eQTL 6.04e-01 0.0504 0.097 0.4 gdT L2
ENSG00000112282 MED23 303138 sc-eQTL 6.27e-01 -0.0507 0.104 0.4 gdT L2
ENSG00000112303 VNN2 -832079 sc-eQTL 8.08e-01 0.0262 0.107 0.4 gdT L2
ENSG00000112306 RPS12 -883189 sc-eQTL 6.00e-01 -0.0215 0.0409 0.4 gdT L2
ENSG00000118507 AKAP7 795913 sc-eQTL 7.81e-01 0.0303 0.109 0.4 gdT L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 7.66e-02 -0.187 0.105 0.4 gdT L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 7.13e-01 -0.032 0.0869 0.393 intMono L2
ENSG00000079950 STX7 -581818 sc-eQTL 3.08e-01 0.0861 0.0842 0.393 intMono L2
ENSG00000093134 VNN3 -803385 sc-eQTL 3.29e-01 -0.0831 0.085 0.393 intMono L2
ENSG00000112282 MED23 303138 sc-eQTL 8.71e-01 0.0152 0.0936 0.393 intMono L2
ENSG00000112299 VNN1 -782675 sc-eQTL 5.91e-01 0.0453 0.0842 0.393 intMono L2
ENSG00000112303 VNN2 -832079 sc-eQTL 1.43e-01 -0.125 0.0852 0.393 intMono L2
ENSG00000112306 RPS12 -883189 sc-eQTL 6.29e-01 -0.018 0.0372 0.393 intMono L2
ENSG00000118507 AKAP7 795913 sc-eQTL 3.14e-01 -0.0919 0.0911 0.393 intMono L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 2.71e-01 -0.0998 0.0904 0.393 intMono L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 6.88e-01 -0.0328 0.0816 0.394 ncMono L2
ENSG00000079950 STX7 -581818 sc-eQTL 9.82e-01 -0.00141 0.0622 0.394 ncMono L2
ENSG00000093134 VNN3 -803385 sc-eQTL 5.44e-01 0.0533 0.0877 0.394 ncMono L2
ENSG00000112282 MED23 303138 sc-eQTL 1.69e-01 -0.122 0.0886 0.394 ncMono L2
ENSG00000112299 VNN1 -782675 sc-eQTL 8.43e-01 0.0173 0.0872 0.394 ncMono L2
ENSG00000112303 VNN2 -832079 sc-eQTL 2.48e-01 -0.0967 0.0835 0.394 ncMono L2
ENSG00000112306 RPS12 -883189 sc-eQTL 3.46e-02 0.0884 0.0416 0.394 ncMono L2
ENSG00000118507 AKAP7 795913 sc-eQTL 9.86e-01 -0.00154 0.0863 0.394 ncMono L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 6.42e-01 0.0345 0.0742 0.394 ncMono L2
ENSG00000079819 EPB41L2 868058 sc-eQTL 9.56e-01 -0.00569 0.102 0.395 pDC L2
ENSG00000079950 STX7 -581818 sc-eQTL 8.54e-01 0.0135 0.0733 0.395 pDC L2
ENSG00000093134 VNN3 -803385 sc-eQTL 8.50e-01 -0.014 0.0738 0.395 pDC L2
ENSG00000112282 MED23 303138 sc-eQTL 7.30e-01 0.0356 0.103 0.395 pDC L2
ENSG00000112299 VNN1 -782675 sc-eQTL 2.61e-01 -0.0844 0.0748 0.395 pDC L2
ENSG00000112303 VNN2 -832079 sc-eQTL 9.81e-02 0.147 0.0886 0.395 pDC L2
ENSG00000112306 RPS12 -883189 sc-eQTL 4.27e-02 -0.124 0.0608 0.395 pDC L2
ENSG00000118507 AKAP7 795913 sc-eQTL 8.97e-01 -0.0109 0.084 0.395 pDC L2
ENSG00000146409 SLC18B1 -881959 sc-eQTL 7.80e-01 0.0255 0.0912 0.395 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 868058 sc-eQTL 3.46e-01 -0.074 0.0785 0.393 B_Memory LOneK1K
ENSG00000079931 MOXD1 -470095 sc-eQTL 2.61e-01 -0.1 0.0888 0.393 B_Memory LOneK1K
ENSG00000079950 STX7 -581818 sc-eQTL 4.79e-01 -0.0357 0.0504 0.393 B_Memory LOneK1K
ENSG00000112282 MED23 303138 sc-eQTL 8.28e-01 -0.0168 0.0772 0.393 B_Memory LOneK1K
ENSG00000112303 VNN2 -832079 sc-eQTL 9.80e-01 0.002 0.0798 0.393 B_Memory LOneK1K
ENSG00000112306 RPS12 -883189 sc-eQTL 2.52e-01 -0.0521 0.0453 0.393 B_Memory LOneK1K
ENSG00000118507 AKAP7 795913 sc-eQTL 6.58e-01 -0.0348 0.0785 0.393 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -881959 sc-eQTL 4.21e-01 -0.0671 0.0834 0.393 B_Memory LOneK1K
ENSG00000228495 LINC01013 -200508 sc-eQTL 2.26e-01 0.0975 0.0803 0.393 B_Memory LOneK1K
ENSG00000079819 EPB41L2 868058 sc-eQTL 8.54e-01 0.0123 0.0669 0.393 B_Naive LOneK1K
ENSG00000079931 MOXD1 -470095 sc-eQTL 8.59e-01 -0.0171 0.0961 0.393 B_Naive LOneK1K
ENSG00000079950 STX7 -581818 sc-eQTL 2.98e-01 -0.041 0.0393 0.393 B_Naive LOneK1K
ENSG00000112282 MED23 303138 sc-eQTL 9.20e-01 -0.00743 0.074 0.393 B_Naive LOneK1K
ENSG00000112303 VNN2 -832079 sc-eQTL 2.71e-01 0.0843 0.0764 0.393 B_Naive LOneK1K
ENSG00000112306 RPS12 -883189 sc-eQTL 3.78e-02 -0.0959 0.0459 0.393 B_Naive LOneK1K
ENSG00000118507 AKAP7 795913 sc-eQTL 9.35e-01 0.00759 0.0933 0.393 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -881959 sc-eQTL 5.65e-01 -0.0503 0.0873 0.393 B_Naive LOneK1K
ENSG00000228495 LINC01013 -200508 sc-eQTL 2.55e-01 0.0632 0.0554 0.393 B_Naive LOneK1K
ENSG00000079819 EPB41L2 868058 sc-eQTL 2.33e-03 -0.238 0.0772 0.393 CD14_Mono LOneK1K
ENSG00000079950 STX7 -581818 sc-eQTL 3.53e-01 -0.045 0.0484 0.393 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -803385 sc-eQTL 6.85e-01 -0.0321 0.079 0.393 CD14_Mono LOneK1K
ENSG00000112282 MED23 303138 sc-eQTL 9.52e-01 -0.00453 0.076 0.393 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -782675 sc-eQTL 3.84e-01 0.0718 0.0823 0.393 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -832079 sc-eQTL 1.10e-01 -0.0869 0.0542 0.393 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -883189 sc-eQTL 8.24e-01 0.00832 0.0374 0.393 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 795913 sc-eQTL 6.79e-01 -0.0309 0.0746 0.393 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -881959 sc-eQTL 4.10e-01 0.0548 0.0664 0.393 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 868058 sc-eQTL 7.34e-01 -0.0283 0.0832 0.392 CD16_Mono LOneK1K
ENSG00000079950 STX7 -581818 sc-eQTL 9.59e-01 0.00305 0.0591 0.392 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -803385 sc-eQTL 5.02e-01 -0.0585 0.0869 0.392 CD16_Mono LOneK1K
ENSG00000112282 MED23 303138 sc-eQTL 5.74e-01 -0.0476 0.0846 0.392 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -782675 sc-eQTL 9.91e-01 0.00102 0.0862 0.392 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -832079 sc-eQTL 6.31e-02 -0.151 0.0806 0.392 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -883189 sc-eQTL 4.12e-01 0.0283 0.0344 0.392 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 795913 sc-eQTL 3.73e-01 -0.0775 0.0867 0.392 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -881959 sc-eQTL 5.10e-01 -0.0551 0.0836 0.392 CD16_Mono LOneK1K
ENSG00000079950 STX7 -581818 sc-eQTL 5.51e-01 -0.0412 0.069 0.392 NK_CD56dim LOneK1K
ENSG00000112282 MED23 303138 sc-eQTL 5.90e-01 0.0362 0.067 0.392 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -832079 sc-eQTL 5.94e-01 -0.0466 0.0874 0.392 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -883189 sc-eQTL 8.13e-01 -0.00845 0.0357 0.392 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 795913 sc-eQTL 1.64e-01 0.103 0.0736 0.392 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079950 STX7 -581818 eQTL 0.0015 0.0502 0.0158 0.0 0.0 0.371
ENSG00000118520 ARG1 358236 eQTL 0.0151 -0.0446 0.0183 0.0 0.0 0.371
ENSG00000118523 CCN2 -19992 pQTL 0.00789 0.0562 0.0211 0.0 0.0 0.374
ENSG00000146409 SLC18B1 -881959 eQTL 0.00418 -0.0637 0.0222 0.0 0.0 0.371

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079950 STX7 -581818 2.67e-07 1.25e-07 3.65e-08 1.84e-07 9.65e-08 9.71e-08 1.49e-07 5.21e-08 1.44e-07 4.38e-08 1.56e-07 7.78e-08 1.69e-07 7.13e-08 5.44e-08 7.17e-08 5.1e-08 1.14e-07 5.21e-08 3.89e-08 1.04e-07 1.26e-07 1.5e-07 4.98e-08 1.65e-07 1.19e-07 1.12e-07 8.71e-08 1.08e-07 1.1e-07 9.64e-08 3.59e-08 2.75e-08 8.49e-08 8.74e-08 4.07e-08 4.67e-08 9.25e-08 8.19e-08 3.01e-08 4.46e-08 1.6e-07 3.93e-08 5.54e-09 1.01e-07 1.99e-08 1.24e-07 4.5e-09 4.77e-08
ENSG00000146409 SLC18B1 -881959 2.66e-07 1.08e-07 3.28e-08 1.7e-07 1.02e-07 9.13e-08 1.39e-07 5.29e-08 1.37e-07 4.23e-08 1.63e-07 7.58e-08 1.26e-07 6.21e-08 4.77e-08 7.87e-08 5.15e-08 1.06e-07 5.22e-08 2.85e-08 1.03e-07 1.31e-07 1.3e-07 5.19e-08 1.31e-07 1.09e-07 1.11e-07 8.45e-08 1.03e-07 1.1e-07 9.75e-08 3.19e-08 2.6e-08 8.02e-08 9.41e-08 4.14e-08 5.1e-08 8.78e-08 8.3e-08 3.69e-08 3.7e-08 1.31e-07 4.51e-08 1.43e-08 1.12e-07 1.74e-08 1.44e-07 4.82e-09 4.61e-08