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Genes within 1Mb (chr6:131923521:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 860199 sc-eQTL 7.87e-02 0.109 0.0615 0.605 B L1
ENSG00000079931 MOXD1 -477954 sc-eQTL 5.75e-01 -0.0507 0.0903 0.605 B L1
ENSG00000079950 STX7 -589677 sc-eQTL 6.02e-01 0.0178 0.0341 0.605 B L1
ENSG00000112282 MED23 295279 sc-eQTL 5.71e-01 0.0386 0.0679 0.605 B L1
ENSG00000112303 VNN2 -839938 sc-eQTL 4.51e-01 -0.0483 0.064 0.605 B L1
ENSG00000112306 RPS12 -891048 sc-eQTL 5.74e-01 0.0218 0.0387 0.605 B L1
ENSG00000118507 AKAP7 788054 sc-eQTL 9.43e-01 0.00577 0.0804 0.605 B L1
ENSG00000146409 SLC18B1 -889818 sc-eQTL 3.75e-02 0.169 0.0807 0.605 B L1
ENSG00000228495 LINC01013 -208367 sc-eQTL 5.80e-01 -0.0296 0.0535 0.605 B L1
ENSG00000079819 EPB41L2 860199 sc-eQTL 4.61e-02 0.16 0.0795 0.605 CD4T L1
ENSG00000079950 STX7 -589677 sc-eQTL 1.20e-01 0.102 0.0651 0.605 CD4T L1
ENSG00000112282 MED23 295279 sc-eQTL 8.46e-01 0.0101 0.052 0.605 CD4T L1
ENSG00000112303 VNN2 -839938 sc-eQTL 4.81e-01 0.04 0.0567 0.605 CD4T L1
ENSG00000112306 RPS12 -891048 sc-eQTL 4.06e-01 0.0321 0.0385 0.605 CD4T L1
ENSG00000118507 AKAP7 788054 sc-eQTL 7.97e-01 0.018 0.0697 0.605 CD4T L1
ENSG00000146409 SLC18B1 -889818 sc-eQTL 5.40e-01 0.0478 0.078 0.605 CD4T L1
ENSG00000079950 STX7 -589677 sc-eQTL 1.21e-02 0.163 0.0642 0.605 CD8T L1
ENSG00000112282 MED23 295279 sc-eQTL 2.04e-01 0.0814 0.064 0.605 CD8T L1
ENSG00000112303 VNN2 -839938 sc-eQTL 8.81e-01 0.0114 0.0761 0.605 CD8T L1
ENSG00000112306 RPS12 -891048 sc-eQTL 9.55e-01 -0.00145 0.026 0.605 CD8T L1
ENSG00000118507 AKAP7 788054 sc-eQTL 5.74e-01 -0.0411 0.073 0.605 CD8T L1
ENSG00000146409 SLC18B1 -889818 sc-eQTL 5.55e-01 -0.0464 0.0786 0.605 CD8T L1
ENSG00000079819 EPB41L2 860199 sc-eQTL 1.62e-01 0.0935 0.0666 0.599 DC L1
ENSG00000079950 STX7 -589677 sc-eQTL 2.83e-01 0.0634 0.0589 0.599 DC L1
ENSG00000093134 VNN3 -811244 sc-eQTL 7.68e-01 0.0216 0.0733 0.599 DC L1
ENSG00000112282 MED23 295279 sc-eQTL 5.63e-01 -0.0498 0.086 0.599 DC L1
ENSG00000112299 VNN1 -790534 sc-eQTL 2.86e-01 -0.0844 0.0789 0.599 DC L1
ENSG00000112303 VNN2 -839938 sc-eQTL 8.21e-01 -0.0192 0.0846 0.599 DC L1
ENSG00000112306 RPS12 -891048 sc-eQTL 4.26e-01 0.0378 0.0474 0.599 DC L1
ENSG00000118507 AKAP7 788054 sc-eQTL 1.35e-01 0.126 0.0841 0.599 DC L1
ENSG00000146409 SLC18B1 -889818 sc-eQTL 4.54e-01 -0.0563 0.075 0.599 DC L1
ENSG00000079819 EPB41L2 860199 sc-eQTL 2.53e-01 0.085 0.0742 0.605 Mono L1
ENSG00000079950 STX7 -589677 sc-eQTL 4.84e-01 0.0311 0.0443 0.605 Mono L1
ENSG00000093134 VNN3 -811244 sc-eQTL 9.55e-01 0.00432 0.0761 0.605 Mono L1
ENSG00000112282 MED23 295279 sc-eQTL 5.84e-01 0.0397 0.0723 0.605 Mono L1
ENSG00000112299 VNN1 -790534 sc-eQTL 2.89e-01 -0.0869 0.0817 0.605 Mono L1
ENSG00000112303 VNN2 -839938 sc-eQTL 2.21e-01 0.0706 0.0576 0.605 Mono L1
ENSG00000112306 RPS12 -891048 sc-eQTL 7.47e-02 0.0616 0.0344 0.605 Mono L1
ENSG00000118507 AKAP7 788054 sc-eQTL 6.73e-01 0.0303 0.0717 0.605 Mono L1
ENSG00000146409 SLC18B1 -889818 sc-eQTL 7.44e-01 -0.0224 0.0685 0.605 Mono L1
ENSG00000079950 STX7 -589677 sc-eQTL 3.88e-01 0.0579 0.067 0.607 NK L1
ENSG00000112282 MED23 295279 sc-eQTL 6.40e-01 0.0288 0.0614 0.607 NK L1
ENSG00000112303 VNN2 -839938 sc-eQTL 4.32e-01 0.0657 0.0834 0.607 NK L1
ENSG00000112306 RPS12 -891048 sc-eQTL 5.48e-01 0.0208 0.0345 0.607 NK L1
ENSG00000118507 AKAP7 788054 sc-eQTL 6.55e-01 0.0329 0.0734 0.607 NK L1
ENSG00000079819 EPB41L2 860199 sc-eQTL 6.16e-01 0.0378 0.0751 0.605 Other_T L1
ENSG00000079950 STX7 -589677 sc-eQTL 7.85e-02 0.119 0.0676 0.605 Other_T L1
ENSG00000112282 MED23 295279 sc-eQTL 4.47e-01 0.0646 0.0849 0.605 Other_T L1
ENSG00000112303 VNN2 -839938 sc-eQTL 5.58e-01 -0.0483 0.0822 0.605 Other_T L1
ENSG00000112306 RPS12 -891048 sc-eQTL 9.90e-01 -0.000392 0.0326 0.605 Other_T L1
ENSG00000118507 AKAP7 788054 sc-eQTL 6.90e-02 -0.135 0.0737 0.605 Other_T L1
ENSG00000146409 SLC18B1 -889818 sc-eQTL 2.02e-01 0.114 0.089 0.605 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 860199 sc-eQTL 9.63e-01 -0.00373 0.0806 0.612 B_Activated L2
ENSG00000079931 MOXD1 -477954 sc-eQTL 5.87e-01 0.0497 0.0914 0.612 B_Activated L2
ENSG00000079950 STX7 -589677 sc-eQTL 9.34e-01 0.00713 0.0858 0.612 B_Activated L2
ENSG00000112282 MED23 295279 sc-eQTL 2.91e-01 -0.1 0.0948 0.612 B_Activated L2
ENSG00000112303 VNN2 -839938 sc-eQTL 2.05e-01 0.116 0.0909 0.612 B_Activated L2
ENSG00000112306 RPS12 -891048 sc-eQTL 7.65e-01 0.0147 0.0489 0.612 B_Activated L2
ENSG00000118507 AKAP7 788054 sc-eQTL 8.75e-01 0.0149 0.0948 0.612 B_Activated L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 7.25e-01 -0.0302 0.0857 0.612 B_Activated L2
ENSG00000228495 LINC01013 -208367 sc-eQTL 5.18e-02 -0.158 0.0808 0.612 B_Activated L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 5.64e-01 0.0502 0.0869 0.603 B_Intermediate L2
ENSG00000079931 MOXD1 -477954 sc-eQTL 5.56e-01 -0.0496 0.0841 0.603 B_Intermediate L2
ENSG00000079950 STX7 -589677 sc-eQTL 6.76e-01 0.023 0.0551 0.603 B_Intermediate L2
ENSG00000112282 MED23 295279 sc-eQTL 1.89e-01 0.11 0.0834 0.603 B_Intermediate L2
ENSG00000112303 VNN2 -839938 sc-eQTL 8.42e-01 -0.0165 0.0829 0.603 B_Intermediate L2
ENSG00000112306 RPS12 -891048 sc-eQTL 7.43e-01 0.0167 0.0508 0.603 B_Intermediate L2
ENSG00000118507 AKAP7 788054 sc-eQTL 6.37e-01 -0.0402 0.0851 0.603 B_Intermediate L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 4.79e-01 -0.0648 0.0914 0.603 B_Intermediate L2
ENSG00000228495 LINC01013 -208367 sc-eQTL 2.27e-01 -0.0938 0.0775 0.603 B_Intermediate L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 6.68e-01 0.0351 0.0816 0.608 B_Memory L2
ENSG00000079931 MOXD1 -477954 sc-eQTL 9.31e-01 0.00737 0.0846 0.608 B_Memory L2
ENSG00000079950 STX7 -589677 sc-eQTL 7.80e-01 0.0185 0.0664 0.608 B_Memory L2
ENSG00000112282 MED23 295279 sc-eQTL 5.01e-01 0.0576 0.0854 0.608 B_Memory L2
ENSG00000112303 VNN2 -839938 sc-eQTL 6.80e-01 0.0358 0.0868 0.608 B_Memory L2
ENSG00000112306 RPS12 -891048 sc-eQTL 7.48e-01 0.0134 0.0418 0.608 B_Memory L2
ENSG00000118507 AKAP7 788054 sc-eQTL 6.86e-01 -0.0361 0.089 0.608 B_Memory L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 4.52e-03 0.246 0.0856 0.608 B_Memory L2
ENSG00000228495 LINC01013 -208367 sc-eQTL 2.97e-01 -0.0849 0.0811 0.608 B_Memory L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 2.98e-03 0.204 0.0678 0.605 B_Naive1 L2
ENSG00000079931 MOXD1 -477954 sc-eQTL 4.34e-01 0.0736 0.094 0.605 B_Naive1 L2
ENSG00000079950 STX7 -589677 sc-eQTL 3.14e-01 0.0414 0.041 0.605 B_Naive1 L2
ENSG00000112282 MED23 295279 sc-eQTL 2.42e-01 0.0862 0.0734 0.605 B_Naive1 L2
ENSG00000112303 VNN2 -839938 sc-eQTL 9.16e-01 0.00848 0.0799 0.605 B_Naive1 L2
ENSG00000112306 RPS12 -891048 sc-eQTL 1.04e-01 0.0739 0.0452 0.605 B_Naive1 L2
ENSG00000118507 AKAP7 788054 sc-eQTL 7.92e-01 0.0244 0.0922 0.605 B_Naive1 L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 3.99e-02 0.18 0.0869 0.605 B_Naive1 L2
ENSG00000228495 LINC01013 -208367 sc-eQTL 7.96e-01 -0.015 0.0581 0.605 B_Naive1 L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 4.23e-01 0.0634 0.079 0.607 B_Naive2 L2
ENSG00000079931 MOXD1 -477954 sc-eQTL 1.41e-01 -0.132 0.0892 0.607 B_Naive2 L2
ENSG00000079950 STX7 -589677 sc-eQTL 5.57e-01 -0.0287 0.0488 0.607 B_Naive2 L2
ENSG00000112282 MED23 295279 sc-eQTL 2.74e-02 -0.198 0.0892 0.607 B_Naive2 L2
ENSG00000112303 VNN2 -839938 sc-eQTL 5.09e-02 -0.175 0.0889 0.607 B_Naive2 L2
ENSG00000112306 RPS12 -891048 sc-eQTL 4.41e-01 0.0366 0.0474 0.607 B_Naive2 L2
ENSG00000118507 AKAP7 788054 sc-eQTL 9.91e-01 0.00106 0.0948 0.607 B_Naive2 L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 7.18e-01 0.0327 0.0906 0.607 B_Naive2 L2
ENSG00000228495 LINC01013 -208367 sc-eQTL 4.99e-01 0.0425 0.0627 0.607 B_Naive2 L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 6.61e-02 0.133 0.0717 0.595 CD4_CTL L2
ENSG00000079950 STX7 -589677 sc-eQTL 8.00e-01 -0.0226 0.0891 0.595 CD4_CTL L2
ENSG00000112282 MED23 295279 sc-eQTL 6.93e-01 0.0367 0.0927 0.595 CD4_CTL L2
ENSG00000112303 VNN2 -839938 sc-eQTL 5.97e-02 0.169 0.0891 0.595 CD4_CTL L2
ENSG00000112306 RPS12 -891048 sc-eQTL 3.67e-01 0.0375 0.0415 0.595 CD4_CTL L2
ENSG00000118507 AKAP7 788054 sc-eQTL 7.54e-01 0.0279 0.0889 0.595 CD4_CTL L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 6.01e-01 -0.0438 0.0837 0.595 CD4_CTL L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 1.22e-01 0.128 0.0826 0.605 CD4_Naive L2
ENSG00000079950 STX7 -589677 sc-eQTL 1.61e-01 0.0987 0.0703 0.605 CD4_Naive L2
ENSG00000112282 MED23 295279 sc-eQTL 3.81e-01 0.0528 0.0601 0.605 CD4_Naive L2
ENSG00000112303 VNN2 -839938 sc-eQTL 5.95e-01 0.0347 0.0653 0.605 CD4_Naive L2
ENSG00000112306 RPS12 -891048 sc-eQTL 2.11e-01 0.053 0.0423 0.605 CD4_Naive L2
ENSG00000118507 AKAP7 788054 sc-eQTL 5.98e-01 -0.0415 0.0787 0.605 CD4_Naive L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 6.49e-01 0.0372 0.0816 0.605 CD4_Naive L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 6.44e-02 0.158 0.0849 0.605 CD4_TCM L2
ENSG00000079950 STX7 -589677 sc-eQTL 1.93e-01 0.102 0.0779 0.605 CD4_TCM L2
ENSG00000112282 MED23 295279 sc-eQTL 8.43e-01 -0.013 0.0657 0.605 CD4_TCM L2
ENSG00000112303 VNN2 -839938 sc-eQTL 4.33e-01 -0.0604 0.0769 0.605 CD4_TCM L2
ENSG00000112306 RPS12 -891048 sc-eQTL 6.99e-01 0.0155 0.0399 0.605 CD4_TCM L2
ENSG00000118507 AKAP7 788054 sc-eQTL 4.59e-02 0.152 0.0756 0.605 CD4_TCM L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 8.06e-01 0.0228 0.0925 0.605 CD4_TCM L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 4.29e-01 -0.0712 0.0898 0.605 CD4_TEM L2
ENSG00000079950 STX7 -589677 sc-eQTL 8.34e-01 -0.0189 0.0899 0.605 CD4_TEM L2
ENSG00000112282 MED23 295279 sc-eQTL 1.02e-01 -0.135 0.0823 0.605 CD4_TEM L2
ENSG00000112303 VNN2 -839938 sc-eQTL 2.65e-02 0.191 0.0853 0.605 CD4_TEM L2
ENSG00000112306 RPS12 -891048 sc-eQTL 2.52e-01 0.0406 0.0353 0.605 CD4_TEM L2
ENSG00000118507 AKAP7 788054 sc-eQTL 5.79e-01 -0.0505 0.0909 0.605 CD4_TEM L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 6.59e-01 0.0389 0.0879 0.605 CD4_TEM L2
ENSG00000079950 STX7 -589677 sc-eQTL 6.72e-01 0.0316 0.0745 0.605 CD8_CTL L2
ENSG00000112282 MED23 295279 sc-eQTL 1.44e-01 0.111 0.076 0.605 CD8_CTL L2
ENSG00000112303 VNN2 -839938 sc-eQTL 8.67e-01 0.0142 0.0846 0.605 CD8_CTL L2
ENSG00000112306 RPS12 -891048 sc-eQTL 6.74e-01 0.0191 0.0453 0.605 CD8_CTL L2
ENSG00000118507 AKAP7 788054 sc-eQTL 8.91e-01 0.0117 0.0854 0.605 CD8_CTL L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 5.65e-01 0.0506 0.0877 0.605 CD8_CTL L2
ENSG00000079950 STX7 -589677 sc-eQTL 1.22e-01 0.137 0.0886 0.605 CD8_Naive L2
ENSG00000112282 MED23 295279 sc-eQTL 3.87e-01 -0.062 0.0715 0.605 CD8_Naive L2
ENSG00000112303 VNN2 -839938 sc-eQTL 9.57e-01 0.00417 0.0769 0.605 CD8_Naive L2
ENSG00000112306 RPS12 -891048 sc-eQTL 7.08e-01 0.0165 0.044 0.605 CD8_Naive L2
ENSG00000118507 AKAP7 788054 sc-eQTL 7.16e-01 -0.0295 0.0809 0.605 CD8_Naive L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 3.82e-01 -0.0773 0.0881 0.605 CD8_Naive L2
ENSG00000079950 STX7 -589677 sc-eQTL 2.47e-01 0.104 0.0893 0.602 CD8_TCM L2
ENSG00000112282 MED23 295279 sc-eQTL 1.77e-01 0.121 0.0895 0.602 CD8_TCM L2
ENSG00000112303 VNN2 -839938 sc-eQTL 5.73e-01 -0.0501 0.0889 0.602 CD8_TCM L2
ENSG00000112306 RPS12 -891048 sc-eQTL 8.57e-01 -0.00782 0.0433 0.602 CD8_TCM L2
ENSG00000118507 AKAP7 788054 sc-eQTL 5.84e-01 0.053 0.0965 0.602 CD8_TCM L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 8.69e-01 -0.0157 0.095 0.602 CD8_TCM L2
ENSG00000079950 STX7 -589677 sc-eQTL 9.34e-01 -0.00779 0.0942 0.607 CD8_TEM L2
ENSG00000112282 MED23 295279 sc-eQTL 7.13e-01 0.0334 0.0907 0.607 CD8_TEM L2
ENSG00000112303 VNN2 -839938 sc-eQTL 6.36e-01 -0.0444 0.0936 0.607 CD8_TEM L2
ENSG00000112306 RPS12 -891048 sc-eQTL 2.05e-01 0.0638 0.0502 0.607 CD8_TEM L2
ENSG00000118507 AKAP7 788054 sc-eQTL 8.20e-01 0.0211 0.0922 0.607 CD8_TEM L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 6.14e-01 -0.0481 0.0952 0.607 CD8_TEM L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 9.27e-01 -0.00753 0.0825 0.602 MAIT L2
ENSG00000079950 STX7 -589677 sc-eQTL 9.53e-01 0.00504 0.0859 0.602 MAIT L2
ENSG00000112282 MED23 295279 sc-eQTL 8.36e-01 -0.0186 0.0898 0.602 MAIT L2
ENSG00000112303 VNN2 -839938 sc-eQTL 7.26e-01 0.0306 0.0873 0.602 MAIT L2
ENSG00000112306 RPS12 -891048 sc-eQTL 6.07e-01 0.0221 0.0429 0.602 MAIT L2
ENSG00000118507 AKAP7 788054 sc-eQTL 1.80e-01 -0.119 0.0884 0.602 MAIT L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 4.63e-01 0.0662 0.0899 0.602 MAIT L2
ENSG00000079950 STX7 -589677 sc-eQTL 7.86e-01 -0.0247 0.0907 0.604 NK_CD56bright L2
ENSG00000112282 MED23 295279 sc-eQTL 2.28e-01 0.115 0.0956 0.604 NK_CD56bright L2
ENSG00000112303 VNN2 -839938 sc-eQTL 8.24e-01 -0.0205 0.0921 0.604 NK_CD56bright L2
ENSG00000112306 RPS12 -891048 sc-eQTL 9.14e-01 -0.00556 0.0513 0.604 NK_CD56bright L2
ENSG00000118507 AKAP7 788054 sc-eQTL 8.29e-01 -0.0202 0.093 0.604 NK_CD56bright L2
ENSG00000079950 STX7 -589677 sc-eQTL 3.85e-01 0.062 0.0713 0.608 NK_CD56dim L2
ENSG00000112282 MED23 295279 sc-eQTL 5.33e-01 -0.0458 0.0733 0.608 NK_CD56dim L2
ENSG00000112303 VNN2 -839938 sc-eQTL 1.06e-01 0.144 0.0887 0.608 NK_CD56dim L2
ENSG00000112306 RPS12 -891048 sc-eQTL 3.11e-01 0.0359 0.0353 0.608 NK_CD56dim L2
ENSG00000118507 AKAP7 788054 sc-eQTL 9.64e-01 -0.00354 0.0779 0.608 NK_CD56dim L2
ENSG00000079950 STX7 -589677 sc-eQTL 3.87e-01 0.0755 0.0872 0.603 NK_HLA L2
ENSG00000112282 MED23 295279 sc-eQTL 6.82e-01 0.0361 0.0882 0.603 NK_HLA L2
ENSG00000112303 VNN2 -839938 sc-eQTL 1.89e-01 0.116 0.088 0.603 NK_HLA L2
ENSG00000112306 RPS12 -891048 sc-eQTL 4.61e-01 -0.0304 0.0411 0.603 NK_HLA L2
ENSG00000118507 AKAP7 788054 sc-eQTL 7.76e-01 -0.0261 0.0915 0.603 NK_HLA L2
ENSG00000079950 STX7 -589677 sc-eQTL 5.65e-01 0.0452 0.0785 0.608 NK_cytokine L2
ENSG00000112282 MED23 295279 sc-eQTL 3.68e-01 0.0731 0.0811 0.608 NK_cytokine L2
ENSG00000112303 VNN2 -839938 sc-eQTL 8.79e-01 0.0135 0.0883 0.608 NK_cytokine L2
ENSG00000112306 RPS12 -891048 sc-eQTL 4.04e-01 0.04 0.0479 0.608 NK_cytokine L2
ENSG00000118507 AKAP7 788054 sc-eQTL 2.40e-01 0.0964 0.0818 0.608 NK_cytokine L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 5.07e-01 -0.076 0.114 0.607 PB L2
ENSG00000079931 MOXD1 -477954 sc-eQTL 5.63e-01 0.0551 0.0949 0.607 PB L2
ENSG00000079950 STX7 -589677 sc-eQTL 9.99e-01 0.000127 0.0794 0.607 PB L2
ENSG00000112282 MED23 295279 sc-eQTL 6.71e-01 0.0459 0.108 0.607 PB L2
ENSG00000112303 VNN2 -839938 sc-eQTL 5.86e-01 0.0529 0.0968 0.607 PB L2
ENSG00000112306 RPS12 -891048 sc-eQTL 6.08e-02 0.103 0.0542 0.607 PB L2
ENSG00000118507 AKAP7 788054 sc-eQTL 6.11e-02 0.196 0.103 0.607 PB L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 6.55e-01 0.0462 0.103 0.607 PB L2
ENSG00000228495 LINC01013 -208367 sc-eQTL 5.83e-01 0.0373 0.0677 0.607 PB L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 2.14e-01 -0.0972 0.078 0.604 Pro_T L2
ENSG00000079950 STX7 -589677 sc-eQTL 1.00e-01 0.133 0.0804 0.604 Pro_T L2
ENSG00000112282 MED23 295279 sc-eQTL 2.60e-01 0.103 0.0908 0.604 Pro_T L2
ENSG00000112303 VNN2 -839938 sc-eQTL 4.39e-01 0.0672 0.0867 0.604 Pro_T L2
ENSG00000112306 RPS12 -891048 sc-eQTL 2.52e-01 0.0376 0.0327 0.604 Pro_T L2
ENSG00000118507 AKAP7 788054 sc-eQTL 1.03e-01 -0.127 0.0776 0.604 Pro_T L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 7.15e-01 0.0311 0.085 0.604 Pro_T L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 4.48e-01 0.0662 0.087 0.605 Treg L2
ENSG00000079950 STX7 -589677 sc-eQTL 6.74e-01 0.0368 0.0871 0.605 Treg L2
ENSG00000112282 MED23 295279 sc-eQTL 5.04e-01 -0.06 0.0895 0.605 Treg L2
ENSG00000112303 VNN2 -839938 sc-eQTL 9.28e-01 0.00659 0.0733 0.605 Treg L2
ENSG00000112306 RPS12 -891048 sc-eQTL 4.86e-01 -0.0226 0.0324 0.605 Treg L2
ENSG00000118507 AKAP7 788054 sc-eQTL 6.16e-01 0.0388 0.0772 0.605 Treg L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 6.99e-01 -0.0355 0.0916 0.605 Treg L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 5.08e-02 0.146 0.0745 0.595 cDC L2
ENSG00000079950 STX7 -589677 sc-eQTL 8.45e-01 0.0147 0.0749 0.595 cDC L2
ENSG00000093134 VNN3 -811244 sc-eQTL 6.71e-01 0.0316 0.0744 0.595 cDC L2
ENSG00000112282 MED23 295279 sc-eQTL 1.80e-01 -0.13 0.0963 0.595 cDC L2
ENSG00000112299 VNN1 -790534 sc-eQTL 3.53e-01 -0.0813 0.0873 0.595 cDC L2
ENSG00000112303 VNN2 -839938 sc-eQTL 9.84e-01 -0.00175 0.0852 0.595 cDC L2
ENSG00000112306 RPS12 -891048 sc-eQTL 6.61e-01 0.0184 0.0421 0.595 cDC L2
ENSG00000118507 AKAP7 788054 sc-eQTL 4.35e-02 0.189 0.0929 0.595 cDC L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 1.87e-01 -0.11 0.0829 0.595 cDC L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 8.98e-01 0.0104 0.0808 0.605 cMono_IL1B L2
ENSG00000079950 STX7 -589677 sc-eQTL 6.30e-01 -0.0274 0.0568 0.605 cMono_IL1B L2
ENSG00000093134 VNN3 -811244 sc-eQTL 7.42e-01 0.0265 0.0803 0.605 cMono_IL1B L2
ENSG00000112282 MED23 295279 sc-eQTL 9.00e-01 0.01 0.0794 0.605 cMono_IL1B L2
ENSG00000112299 VNN1 -790534 sc-eQTL 2.56e-01 -0.0921 0.0808 0.605 cMono_IL1B L2
ENSG00000112303 VNN2 -839938 sc-eQTL 5.48e-01 0.039 0.0648 0.605 cMono_IL1B L2
ENSG00000112306 RPS12 -891048 sc-eQTL 7.06e-02 0.0649 0.0357 0.605 cMono_IL1B L2
ENSG00000118507 AKAP7 788054 sc-eQTL 9.70e-01 -0.00291 0.0773 0.605 cMono_IL1B L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 7.25e-01 -0.0245 0.0694 0.605 cMono_IL1B L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 9.90e-01 -0.00104 0.0843 0.605 cMono_S100A L2
ENSG00000079950 STX7 -589677 sc-eQTL 2.65e-01 0.0688 0.0616 0.605 cMono_S100A L2
ENSG00000093134 VNN3 -811244 sc-eQTL 7.58e-01 -0.0238 0.0771 0.605 cMono_S100A L2
ENSG00000112282 MED23 295279 sc-eQTL 1.88e-01 0.11 0.0834 0.605 cMono_S100A L2
ENSG00000112299 VNN1 -790534 sc-eQTL 4.76e-01 -0.0597 0.0836 0.605 cMono_S100A L2
ENSG00000112303 VNN2 -839938 sc-eQTL 6.83e-01 0.0224 0.0548 0.605 cMono_S100A L2
ENSG00000112306 RPS12 -891048 sc-eQTL 8.37e-01 0.00814 0.0395 0.605 cMono_S100A L2
ENSG00000118507 AKAP7 788054 sc-eQTL 4.18e-01 -0.0665 0.0818 0.605 cMono_S100A L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 7.11e-01 0.0271 0.0731 0.605 cMono_S100A L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 1.51e-01 0.135 0.0936 0.603 gdT L2
ENSG00000079950 STX7 -589677 sc-eQTL 8.50e-01 0.0187 0.0988 0.603 gdT L2
ENSG00000112282 MED23 295279 sc-eQTL 9.87e-01 0.00171 0.106 0.603 gdT L2
ENSG00000112303 VNN2 -839938 sc-eQTL 4.15e-01 -0.0891 0.109 0.603 gdT L2
ENSG00000112306 RPS12 -891048 sc-eQTL 9.83e-01 -0.000898 0.0416 0.603 gdT L2
ENSG00000118507 AKAP7 788054 sc-eQTL 8.78e-02 0.188 0.109 0.603 gdT L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 6.80e-01 0.0445 0.108 0.603 gdT L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 7.31e-01 0.0296 0.0859 0.609 intMono L2
ENSG00000079950 STX7 -589677 sc-eQTL 4.47e-01 0.0635 0.0833 0.609 intMono L2
ENSG00000093134 VNN3 -811244 sc-eQTL 8.43e-01 0.0167 0.0842 0.609 intMono L2
ENSG00000112282 MED23 295279 sc-eQTL 5.57e-01 0.0544 0.0924 0.609 intMono L2
ENSG00000112299 VNN1 -790534 sc-eQTL 3.89e-01 -0.0717 0.0831 0.609 intMono L2
ENSG00000112303 VNN2 -839938 sc-eQTL 6.75e-01 0.0356 0.0846 0.609 intMono L2
ENSG00000112306 RPS12 -891048 sc-eQTL 1.80e-02 0.0866 0.0363 0.609 intMono L2
ENSG00000118507 AKAP7 788054 sc-eQTL 9.32e-01 -0.00773 0.0903 0.609 intMono L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 9.50e-01 0.00566 0.0896 0.609 intMono L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 1.18e-01 0.127 0.0807 0.606 ncMono L2
ENSG00000079950 STX7 -589677 sc-eQTL 3.42e-01 0.0588 0.0618 0.606 ncMono L2
ENSG00000093134 VNN3 -811244 sc-eQTL 7.01e-01 -0.0336 0.0873 0.606 ncMono L2
ENSG00000112282 MED23 295279 sc-eQTL 5.46e-01 0.0535 0.0884 0.606 ncMono L2
ENSG00000112299 VNN1 -790534 sc-eQTL 1.23e-01 -0.133 0.0862 0.606 ncMono L2
ENSG00000112303 VNN2 -839938 sc-eQTL 1.02e-01 0.136 0.0828 0.606 ncMono L2
ENSG00000112306 RPS12 -891048 sc-eQTL 1.59e-01 0.0588 0.0416 0.606 ncMono L2
ENSG00000118507 AKAP7 788054 sc-eQTL 3.42e-01 0.0816 0.0856 0.606 ncMono L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 4.11e-01 -0.0607 0.0737 0.606 ncMono L2
ENSG00000079819 EPB41L2 860199 sc-eQTL 6.24e-01 -0.0489 0.0997 0.579 pDC L2
ENSG00000079950 STX7 -589677 sc-eQTL 3.49e-01 0.0672 0.0716 0.579 pDC L2
ENSG00000093134 VNN3 -811244 sc-eQTL 3.84e-01 0.063 0.0721 0.579 pDC L2
ENSG00000112282 MED23 295279 sc-eQTL 1.19e-01 0.157 0.1 0.579 pDC L2
ENSG00000112299 VNN1 -790534 sc-eQTL 7.44e-01 -0.0241 0.0736 0.579 pDC L2
ENSG00000112303 VNN2 -839938 sc-eQTL 3.26e-01 -0.086 0.0873 0.579 pDC L2
ENSG00000112306 RPS12 -891048 sc-eQTL 7.62e-01 0.0183 0.0603 0.579 pDC L2
ENSG00000118507 AKAP7 788054 sc-eQTL 6.84e-01 0.0335 0.0823 0.579 pDC L2
ENSG00000146409 SLC18B1 -889818 sc-eQTL 6.08e-01 0.0458 0.0893 0.579 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 860199 sc-eQTL 4.77e-01 0.0557 0.0781 0.605 B_Memory LOneK1K
ENSG00000079931 MOXD1 -477954 sc-eQTL 9.37e-01 -0.00702 0.0886 0.605 B_Memory LOneK1K
ENSG00000079950 STX7 -589677 sc-eQTL 8.18e-01 0.0116 0.0502 0.605 B_Memory LOneK1K
ENSG00000112282 MED23 295279 sc-eQTL 4.78e-01 0.0545 0.0768 0.605 B_Memory LOneK1K
ENSG00000112303 VNN2 -839938 sc-eQTL 5.36e-01 0.0492 0.0794 0.605 B_Memory LOneK1K
ENSG00000112306 RPS12 -891048 sc-eQTL 8.26e-01 0.00997 0.0453 0.605 B_Memory LOneK1K
ENSG00000118507 AKAP7 788054 sc-eQTL 4.79e-01 -0.0553 0.078 0.605 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -889818 sc-eQTL 6.46e-01 0.0382 0.083 0.605 B_Memory LOneK1K
ENSG00000228495 LINC01013 -208367 sc-eQTL 3.98e-02 -0.164 0.0793 0.605 B_Memory LOneK1K
ENSG00000079819 EPB41L2 860199 sc-eQTL 1.52e-02 0.159 0.0647 0.605 B_Naive LOneK1K
ENSG00000079931 MOXD1 -477954 sc-eQTL 7.35e-01 -0.0319 0.0942 0.605 B_Naive LOneK1K
ENSG00000079950 STX7 -589677 sc-eQTL 5.17e-01 0.0251 0.0386 0.605 B_Naive LOneK1K
ENSG00000112282 MED23 295279 sc-eQTL 7.62e-01 0.022 0.0726 0.605 B_Naive LOneK1K
ENSG00000112303 VNN2 -839938 sc-eQTL 1.90e-01 -0.0983 0.0748 0.605 B_Naive LOneK1K
ENSG00000112306 RPS12 -891048 sc-eQTL 9.28e-02 0.0762 0.0451 0.605 B_Naive LOneK1K
ENSG00000118507 AKAP7 788054 sc-eQTL 9.99e-01 0.000146 0.0915 0.605 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -889818 sc-eQTL 5.01e-02 0.167 0.0849 0.605 B_Naive LOneK1K
ENSG00000228495 LINC01013 -208367 sc-eQTL 9.20e-01 0.00546 0.0545 0.605 B_Naive LOneK1K
ENSG00000079819 EPB41L2 860199 sc-eQTL 6.53e-01 0.0351 0.0779 0.605 CD14_Mono LOneK1K
ENSG00000079950 STX7 -589677 sc-eQTL 7.86e-01 0.0131 0.0479 0.605 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -811244 sc-eQTL 7.92e-01 0.0206 0.0781 0.605 CD14_Mono LOneK1K
ENSG00000112282 MED23 295279 sc-eQTL 6.62e-01 0.0329 0.0751 0.605 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -790534 sc-eQTL 2.52e-01 -0.0934 0.0812 0.605 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -839938 sc-eQTL 3.79e-01 0.0474 0.0538 0.605 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -891048 sc-eQTL 1.00e-01 0.0606 0.0367 0.605 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 788054 sc-eQTL 7.80e-01 0.0206 0.0737 0.605 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -889818 sc-eQTL 7.07e-01 -0.0247 0.0657 0.605 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 860199 sc-eQTL 2.64e-01 0.0921 0.0823 0.608 CD16_Mono LOneK1K
ENSG00000079950 STX7 -589677 sc-eQTL 2.51e-01 0.0672 0.0584 0.608 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -811244 sc-eQTL 7.15e-01 -0.0315 0.0861 0.608 CD16_Mono LOneK1K
ENSG00000112282 MED23 295279 sc-eQTL 8.00e-01 0.0213 0.0839 0.608 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -790534 sc-eQTL 8.09e-02 -0.149 0.0848 0.608 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -839938 sc-eQTL 9.12e-02 0.136 0.08 0.608 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -891048 sc-eQTL 7.88e-02 0.0599 0.0339 0.608 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 788054 sc-eQTL 7.71e-01 0.0251 0.0861 0.608 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -889818 sc-eQTL 5.66e-01 -0.0476 0.0829 0.608 CD16_Mono LOneK1K
ENSG00000079950 STX7 -589677 sc-eQTL 3.37e-01 0.0647 0.0673 0.608 NK_CD56dim LOneK1K
ENSG00000112282 MED23 295279 sc-eQTL 8.93e-01 0.00882 0.0655 0.608 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -839938 sc-eQTL 3.71e-01 0.0763 0.0852 0.608 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -891048 sc-eQTL 3.58e-01 0.032 0.0348 0.608 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 788054 sc-eQTL 7.11e-01 0.0268 0.0722 0.608 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112303 VNN2 -839938 pQTL 0.0211 0.0591 0.0256 0.0 0.0 0.413
ENSG00000112303 VNN2 -839938 eQTL 0.00718 0.0356 0.0132 0.0 0.0 0.415
ENSG00000118507 AKAP7 788054 eQTL 0.00954 -0.0549 0.0211 0.0 0.0 0.415
ENSG00000118520 ARG1 350377 pQTL 0.00531 -0.0394 0.0141 0.0 0.0 0.413
ENSG00000118523 CCN2 -27851 pQTL 0.000189 -0.0795 0.0212 0.0 0.0 0.413
ENSG00000234484 AL032821.1 -829154 eQTL 0.019 -0.0746 0.0317 0.0 0.0 0.415

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina