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Genes within 1Mb (chr6:131919978:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 856656 sc-eQTL 1.85e-01 0.0805 0.0605 0.583 B L1
ENSG00000079931 MOXD1 -481497 sc-eQTL 6.28e-01 -0.0429 0.0886 0.583 B L1
ENSG00000079950 STX7 -593220 sc-eQTL 3.63e-01 0.0304 0.0334 0.583 B L1
ENSG00000112282 MED23 291736 sc-eQTL 7.71e-01 0.0194 0.0666 0.583 B L1
ENSG00000112303 VNN2 -843481 sc-eQTL 6.15e-01 -0.0317 0.0628 0.583 B L1
ENSG00000112306 RPS12 -894591 sc-eQTL 4.38e-01 0.0295 0.0379 0.583 B L1
ENSG00000118507 AKAP7 784511 sc-eQTL 7.54e-01 0.0248 0.0789 0.583 B L1
ENSG00000146409 SLC18B1 -893361 sc-eQTL 3.64e-02 0.167 0.0791 0.583 B L1
ENSG00000228495 LINC01013 -211910 sc-eQTL 8.69e-01 -0.00868 0.0525 0.583 B L1
ENSG00000079819 EPB41L2 856656 sc-eQTL 6.89e-02 0.143 0.0781 0.583 CD4T L1
ENSG00000079950 STX7 -593220 sc-eQTL 9.32e-02 0.108 0.0638 0.583 CD4T L1
ENSG00000112282 MED23 291736 sc-eQTL 7.75e-01 0.0146 0.051 0.583 CD4T L1
ENSG00000112303 VNN2 -843481 sc-eQTL 4.47e-01 0.0423 0.0556 0.583 CD4T L1
ENSG00000112306 RPS12 -894591 sc-eQTL 2.93e-01 0.0398 0.0377 0.583 CD4T L1
ENSG00000118507 AKAP7 784511 sc-eQTL 3.59e-01 0.0627 0.0683 0.583 CD4T L1
ENSG00000146409 SLC18B1 -893361 sc-eQTL 2.38e-01 0.0903 0.0763 0.583 CD4T L1
ENSG00000079950 STX7 -593220 sc-eQTL 3.99e-03 0.183 0.0628 0.583 CD8T L1
ENSG00000112282 MED23 291736 sc-eQTL 6.22e-02 0.117 0.0625 0.583 CD8T L1
ENSG00000112303 VNN2 -843481 sc-eQTL 8.25e-01 0.0165 0.0747 0.583 CD8T L1
ENSG00000112306 RPS12 -894591 sc-eQTL 9.21e-01 0.00253 0.0255 0.583 CD8T L1
ENSG00000118507 AKAP7 784511 sc-eQTL 7.74e-01 0.0207 0.0718 0.583 CD8T L1
ENSG00000146409 SLC18B1 -893361 sc-eQTL 7.05e-01 -0.0293 0.0772 0.583 CD8T L1
ENSG00000079819 EPB41L2 856656 sc-eQTL 3.69e-01 0.0585 0.065 0.579 DC L1
ENSG00000079950 STX7 -593220 sc-eQTL 2.29e-01 0.0691 0.0573 0.579 DC L1
ENSG00000093134 VNN3 -814787 sc-eQTL 9.25e-01 0.00667 0.0713 0.579 DC L1
ENSG00000112282 MED23 291736 sc-eQTL 7.49e-01 -0.0268 0.0837 0.579 DC L1
ENSG00000112299 VNN1 -794077 sc-eQTL 3.59e-01 -0.0706 0.0768 0.579 DC L1
ENSG00000112303 VNN2 -843481 sc-eQTL 9.85e-01 0.00153 0.0823 0.579 DC L1
ENSG00000112306 RPS12 -894591 sc-eQTL 5.84e-01 0.0253 0.0461 0.579 DC L1
ENSG00000118507 AKAP7 784511 sc-eQTL 3.28e-01 0.0805 0.0821 0.579 DC L1
ENSG00000146409 SLC18B1 -893361 sc-eQTL 3.72e-01 -0.0652 0.0729 0.579 DC L1
ENSG00000079819 EPB41L2 856656 sc-eQTL 1.93e-01 0.0945 0.0723 0.583 Mono L1
ENSG00000079950 STX7 -593220 sc-eQTL 4.95e-01 0.0295 0.0432 0.583 Mono L1
ENSG00000093134 VNN3 -814787 sc-eQTL 7.46e-01 -0.024 0.0742 0.583 Mono L1
ENSG00000112282 MED23 291736 sc-eQTL 5.63e-01 0.0408 0.0704 0.583 Mono L1
ENSG00000112299 VNN1 -794077 sc-eQTL 2.22e-01 -0.0975 0.0796 0.583 Mono L1
ENSG00000112303 VNN2 -843481 sc-eQTL 4.57e-01 0.0419 0.0563 0.583 Mono L1
ENSG00000112306 RPS12 -894591 sc-eQTL 5.86e-02 0.0637 0.0335 0.583 Mono L1
ENSG00000118507 AKAP7 784511 sc-eQTL 3.85e-01 0.0609 0.0698 0.583 Mono L1
ENSG00000146409 SLC18B1 -893361 sc-eQTL 3.85e-01 -0.058 0.0667 0.583 Mono L1
ENSG00000079950 STX7 -593220 sc-eQTL 5.31e-01 0.041 0.0653 0.586 NK L1
ENSG00000112282 MED23 291736 sc-eQTL 4.39e-01 0.0462 0.0596 0.586 NK L1
ENSG00000112303 VNN2 -843481 sc-eQTL 4.61e-01 0.06 0.0812 0.586 NK L1
ENSG00000112306 RPS12 -894591 sc-eQTL 5.22e-01 0.0216 0.0336 0.586 NK L1
ENSG00000118507 AKAP7 784511 sc-eQTL 6.74e-01 0.0301 0.0714 0.586 NK L1
ENSG00000079819 EPB41L2 856656 sc-eQTL 8.42e-01 0.0146 0.0731 0.583 Other_T L1
ENSG00000079950 STX7 -593220 sc-eQTL 1.11e-01 0.105 0.0657 0.583 Other_T L1
ENSG00000112282 MED23 291736 sc-eQTL 2.95e-01 0.0865 0.0824 0.583 Other_T L1
ENSG00000112303 VNN2 -843481 sc-eQTL 6.09e-01 -0.0409 0.0799 0.583 Other_T L1
ENSG00000112306 RPS12 -894591 sc-eQTL 6.98e-01 0.0123 0.0317 0.583 Other_T L1
ENSG00000118507 AKAP7 784511 sc-eQTL 7.96e-02 -0.126 0.0716 0.583 Other_T L1
ENSG00000146409 SLC18B1 -893361 sc-eQTL 2.51e-01 0.0996 0.0865 0.583 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 856656 sc-eQTL 3.64e-01 0.0717 0.0788 0.589 B_Activated L2
ENSG00000079931 MOXD1 -481497 sc-eQTL 7.65e-01 0.0268 0.0896 0.589 B_Activated L2
ENSG00000079950 STX7 -593220 sc-eQTL 6.62e-01 -0.0368 0.084 0.589 B_Activated L2
ENSG00000112282 MED23 291736 sc-eQTL 3.58e-01 -0.0856 0.0929 0.589 B_Activated L2
ENSG00000112303 VNN2 -843481 sc-eQTL 2.30e-01 0.107 0.089 0.589 B_Activated L2
ENSG00000112306 RPS12 -894591 sc-eQTL 8.88e-01 0.00677 0.0479 0.589 B_Activated L2
ENSG00000118507 AKAP7 784511 sc-eQTL 8.22e-01 -0.0209 0.0928 0.589 B_Activated L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 8.64e-01 -0.0144 0.0839 0.589 B_Activated L2
ENSG00000228495 LINC01013 -211910 sc-eQTL 7.42e-02 -0.142 0.0793 0.589 B_Activated L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 7.61e-01 0.0258 0.0847 0.582 B_Intermediate L2
ENSG00000079931 MOXD1 -481497 sc-eQTL 4.02e-01 -0.0686 0.0818 0.582 B_Intermediate L2
ENSG00000079950 STX7 -593220 sc-eQTL 3.16e-01 0.0538 0.0535 0.582 B_Intermediate L2
ENSG00000112282 MED23 291736 sc-eQTL 3.62e-01 0.0743 0.0814 0.582 B_Intermediate L2
ENSG00000112303 VNN2 -843481 sc-eQTL 7.48e-01 -0.026 0.0807 0.582 B_Intermediate L2
ENSG00000112306 RPS12 -894591 sc-eQTL 3.89e-01 0.0426 0.0493 0.582 B_Intermediate L2
ENSG00000118507 AKAP7 784511 sc-eQTL 7.82e-01 -0.023 0.0829 0.582 B_Intermediate L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 3.60e-01 -0.0815 0.0889 0.582 B_Intermediate L2
ENSG00000228495 LINC01013 -211910 sc-eQTL 3.72e-01 -0.0676 0.0755 0.582 B_Intermediate L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 9.47e-01 -0.00524 0.0792 0.586 B_Memory L2
ENSG00000079931 MOXD1 -481497 sc-eQTL 8.00e-01 -0.0208 0.0821 0.586 B_Memory L2
ENSG00000079950 STX7 -593220 sc-eQTL 4.83e-01 0.0452 0.0643 0.586 B_Memory L2
ENSG00000112282 MED23 291736 sc-eQTL 3.84e-01 0.0723 0.0828 0.586 B_Memory L2
ENSG00000112303 VNN2 -843481 sc-eQTL 7.16e-01 -0.0307 0.0842 0.586 B_Memory L2
ENSG00000112306 RPS12 -894591 sc-eQTL 5.60e-01 0.0237 0.0406 0.586 B_Memory L2
ENSG00000118507 AKAP7 784511 sc-eQTL 9.46e-01 -0.00584 0.0864 0.586 B_Memory L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 3.72e-03 0.244 0.083 0.586 B_Memory L2
ENSG00000228495 LINC01013 -211910 sc-eQTL 2.24e-01 -0.096 0.0787 0.586 B_Memory L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 4.34e-03 0.191 0.0663 0.583 B_Naive1 L2
ENSG00000079931 MOXD1 -481497 sc-eQTL 1.28e-01 0.14 0.0914 0.583 B_Naive1 L2
ENSG00000079950 STX7 -593220 sc-eQTL 1.67e-01 0.0554 0.04 0.583 B_Naive1 L2
ENSG00000112282 MED23 291736 sc-eQTL 4.55e-01 0.0537 0.0718 0.583 B_Naive1 L2
ENSG00000112303 VNN2 -843481 sc-eQTL 5.63e-01 0.0451 0.0779 0.583 B_Naive1 L2
ENSG00000112306 RPS12 -894591 sc-eQTL 8.24e-02 0.0769 0.0441 0.583 B_Naive1 L2
ENSG00000118507 AKAP7 784511 sc-eQTL 7.52e-01 0.0285 0.09 0.583 B_Naive1 L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 4.57e-02 0.171 0.0849 0.583 B_Naive1 L2
ENSG00000228495 LINC01013 -211910 sc-eQTL 7.83e-01 0.0157 0.0567 0.583 B_Naive1 L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 6.57e-01 0.0345 0.0776 0.586 B_Naive2 L2
ENSG00000079931 MOXD1 -481497 sc-eQTL 2.03e-01 -0.112 0.0876 0.586 B_Naive2 L2
ENSG00000079950 STX7 -593220 sc-eQTL 9.59e-01 0.00245 0.0479 0.586 B_Naive2 L2
ENSG00000112282 MED23 291736 sc-eQTL 5.88e-02 -0.167 0.0877 0.586 B_Naive2 L2
ENSG00000112303 VNN2 -843481 sc-eQTL 1.96e-01 -0.114 0.0876 0.586 B_Naive2 L2
ENSG00000112306 RPS12 -894591 sc-eQTL 3.43e-01 0.0442 0.0465 0.586 B_Naive2 L2
ENSG00000118507 AKAP7 784511 sc-eQTL 6.49e-01 0.0423 0.0929 0.586 B_Naive2 L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 9.79e-01 0.00234 0.0888 0.586 B_Naive2 L2
ENSG00000228495 LINC01013 -211910 sc-eQTL 4.26e-01 0.0491 0.0615 0.586 B_Naive2 L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 3.98e-01 0.0598 0.0706 0.577 CD4_CTL L2
ENSG00000079950 STX7 -593220 sc-eQTL 7.17e-01 0.0316 0.0872 0.577 CD4_CTL L2
ENSG00000112282 MED23 291736 sc-eQTL 7.80e-01 0.0254 0.0907 0.577 CD4_CTL L2
ENSG00000112303 VNN2 -843481 sc-eQTL 1.20e-01 0.136 0.0875 0.577 CD4_CTL L2
ENSG00000112306 RPS12 -894591 sc-eQTL 3.86e-01 0.0353 0.0406 0.577 CD4_CTL L2
ENSG00000118507 AKAP7 784511 sc-eQTL 6.19e-01 0.0433 0.0869 0.577 CD4_CTL L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 7.36e-01 -0.0276 0.082 0.577 CD4_CTL L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 4.46e-02 0.163 0.0807 0.583 CD4_Naive L2
ENSG00000079950 STX7 -593220 sc-eQTL 7.06e-02 0.125 0.0687 0.583 CD4_Naive L2
ENSG00000112282 MED23 291736 sc-eQTL 2.38e-01 0.0696 0.0589 0.583 CD4_Naive L2
ENSG00000112303 VNN2 -843481 sc-eQTL 8.34e-01 0.0135 0.0641 0.583 CD4_Naive L2
ENSG00000112306 RPS12 -894591 sc-eQTL 1.21e-01 0.0643 0.0414 0.583 CD4_Naive L2
ENSG00000118507 AKAP7 784511 sc-eQTL 7.79e-01 0.0217 0.0772 0.583 CD4_Naive L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 4.08e-01 0.0663 0.0799 0.583 CD4_Naive L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 1.84e-01 0.112 0.0839 0.583 CD4_TCM L2
ENSG00000079950 STX7 -593220 sc-eQTL 3.62e-01 0.0701 0.0768 0.583 CD4_TCM L2
ENSG00000112282 MED23 291736 sc-eQTL 7.64e-01 -0.0194 0.0647 0.583 CD4_TCM L2
ENSG00000112303 VNN2 -843481 sc-eQTL 6.27e-01 -0.0369 0.0758 0.583 CD4_TCM L2
ENSG00000112306 RPS12 -894591 sc-eQTL 5.90e-01 0.0212 0.0393 0.583 CD4_TCM L2
ENSG00000118507 AKAP7 784511 sc-eQTL 3.97e-02 0.154 0.0743 0.583 CD4_TCM L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 3.46e-01 0.0858 0.0908 0.583 CD4_TCM L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 4.94e-01 -0.0599 0.0875 0.583 CD4_TEM L2
ENSG00000079950 STX7 -593220 sc-eQTL 8.70e-01 -0.0144 0.0876 0.583 CD4_TEM L2
ENSG00000112282 MED23 291736 sc-eQTL 1.28e-01 -0.123 0.0803 0.583 CD4_TEM L2
ENSG00000112303 VNN2 -843481 sc-eQTL 3.25e-02 0.179 0.0832 0.583 CD4_TEM L2
ENSG00000112306 RPS12 -894591 sc-eQTL 1.43e-01 0.0504 0.0343 0.583 CD4_TEM L2
ENSG00000118507 AKAP7 784511 sc-eQTL 7.25e-01 -0.0312 0.0886 0.583 CD4_TEM L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 7.00e-01 0.0331 0.0857 0.583 CD4_TEM L2
ENSG00000079950 STX7 -593220 sc-eQTL 4.23e-01 0.0583 0.0726 0.583 CD8_CTL L2
ENSG00000112282 MED23 291736 sc-eQTL 9.41e-02 0.125 0.074 0.583 CD8_CTL L2
ENSG00000112303 VNN2 -843481 sc-eQTL 8.87e-01 -0.0117 0.0826 0.583 CD8_CTL L2
ENSG00000112306 RPS12 -894591 sc-eQTL 3.90e-01 0.038 0.0442 0.583 CD8_CTL L2
ENSG00000118507 AKAP7 784511 sc-eQTL 5.18e-01 0.054 0.0833 0.583 CD8_CTL L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 6.58e-01 0.038 0.0857 0.583 CD8_CTL L2
ENSG00000079950 STX7 -593220 sc-eQTL 1.83e-01 0.116 0.0866 0.583 CD8_Naive L2
ENSG00000112282 MED23 291736 sc-eQTL 9.84e-01 -0.00138 0.0699 0.583 CD8_Naive L2
ENSG00000112303 VNN2 -843481 sc-eQTL 6.25e-01 0.0367 0.075 0.583 CD8_Naive L2
ENSG00000112306 RPS12 -894591 sc-eQTL 4.58e-01 0.0319 0.0429 0.583 CD8_Naive L2
ENSG00000118507 AKAP7 784511 sc-eQTL 8.88e-01 0.0111 0.0789 0.583 CD8_Naive L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 4.13e-01 -0.0706 0.086 0.583 CD8_Naive L2
ENSG00000079950 STX7 -593220 sc-eQTL 2.12e-01 0.108 0.0863 0.583 CD8_TCM L2
ENSG00000112282 MED23 291736 sc-eQTL 3.46e-01 0.082 0.0868 0.583 CD8_TCM L2
ENSG00000112303 VNN2 -843481 sc-eQTL 7.17e-01 -0.0312 0.086 0.583 CD8_TCM L2
ENSG00000112306 RPS12 -894591 sc-eQTL 9.89e-01 0.000558 0.0419 0.583 CD8_TCM L2
ENSG00000118507 AKAP7 784511 sc-eQTL 5.99e-01 0.0491 0.0933 0.583 CD8_TCM L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 9.60e-01 0.00464 0.0919 0.583 CD8_TCM L2
ENSG00000079950 STX7 -593220 sc-eQTL 3.91e-01 0.0792 0.0921 0.584 CD8_TEM L2
ENSG00000112282 MED23 291736 sc-eQTL 6.08e-01 0.0456 0.0887 0.584 CD8_TEM L2
ENSG00000112303 VNN2 -843481 sc-eQTL 5.75e-01 -0.0514 0.0916 0.584 CD8_TEM L2
ENSG00000112306 RPS12 -894591 sc-eQTL 9.30e-02 0.0827 0.049 0.584 CD8_TEM L2
ENSG00000118507 AKAP7 784511 sc-eQTL 5.03e-01 0.0605 0.0902 0.584 CD8_TEM L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 4.92e-01 -0.0642 0.0932 0.584 CD8_TEM L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 5.00e-01 0.0543 0.0803 0.58 MAIT L2
ENSG00000079950 STX7 -593220 sc-eQTL 6.21e-01 0.0414 0.0837 0.58 MAIT L2
ENSG00000112282 MED23 291736 sc-eQTL 8.78e-01 0.0135 0.0876 0.58 MAIT L2
ENSG00000112303 VNN2 -843481 sc-eQTL 5.38e-01 0.0525 0.0851 0.58 MAIT L2
ENSG00000112306 RPS12 -894591 sc-eQTL 4.71e-01 0.0302 0.0418 0.58 MAIT L2
ENSG00000118507 AKAP7 784511 sc-eQTL 1.94e-01 -0.112 0.0862 0.58 MAIT L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 6.20e-01 0.0435 0.0878 0.58 MAIT L2
ENSG00000079950 STX7 -593220 sc-eQTL 9.53e-01 -0.00518 0.0877 0.582 NK_CD56bright L2
ENSG00000112282 MED23 291736 sc-eQTL 3.20e-02 0.198 0.0917 0.582 NK_CD56bright L2
ENSG00000112303 VNN2 -843481 sc-eQTL 6.95e-01 -0.035 0.0891 0.582 NK_CD56bright L2
ENSG00000112306 RPS12 -894591 sc-eQTL 6.99e-01 -0.0192 0.0496 0.582 NK_CD56bright L2
ENSG00000118507 AKAP7 784511 sc-eQTL 8.47e-01 -0.0174 0.09 0.582 NK_CD56bright L2
ENSG00000079950 STX7 -593220 sc-eQTL 5.21e-01 0.0445 0.0693 0.586 NK_CD56dim L2
ENSG00000112282 MED23 291736 sc-eQTL 7.97e-01 -0.0183 0.0713 0.586 NK_CD56dim L2
ENSG00000112303 VNN2 -843481 sc-eQTL 1.58e-01 0.122 0.0863 0.586 NK_CD56dim L2
ENSG00000112306 RPS12 -894591 sc-eQTL 2.92e-01 0.0363 0.0343 0.586 NK_CD56dim L2
ENSG00000118507 AKAP7 784511 sc-eQTL 6.13e-01 -0.0383 0.0756 0.586 NK_CD56dim L2
ENSG00000079950 STX7 -593220 sc-eQTL 3.33e-01 0.0816 0.0842 0.58 NK_HLA L2
ENSG00000112282 MED23 291736 sc-eQTL 6.00e-01 0.0447 0.0852 0.58 NK_HLA L2
ENSG00000112303 VNN2 -843481 sc-eQTL 1.76e-01 0.115 0.085 0.58 NK_HLA L2
ENSG00000112306 RPS12 -894591 sc-eQTL 5.71e-01 -0.0225 0.0397 0.58 NK_HLA L2
ENSG00000118507 AKAP7 784511 sc-eQTL 7.13e-01 -0.0325 0.0883 0.58 NK_HLA L2
ENSG00000079950 STX7 -593220 sc-eQTL 4.38e-01 0.0593 0.0763 0.586 NK_cytokine L2
ENSG00000112282 MED23 291736 sc-eQTL 3.99e-01 0.0667 0.0789 0.586 NK_cytokine L2
ENSG00000112303 VNN2 -843481 sc-eQTL 5.22e-01 0.055 0.0859 0.586 NK_cytokine L2
ENSG00000112306 RPS12 -894591 sc-eQTL 8.03e-01 0.0117 0.0466 0.586 NK_cytokine L2
ENSG00000118507 AKAP7 784511 sc-eQTL 1.34e-01 0.119 0.0794 0.586 NK_cytokine L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 4.08e-01 -0.094 0.113 0.589 PB L2
ENSG00000079931 MOXD1 -481497 sc-eQTL 7.75e-01 0.0269 0.0942 0.589 PB L2
ENSG00000079950 STX7 -593220 sc-eQTL 8.52e-01 -0.0147 0.0787 0.589 PB L2
ENSG00000112282 MED23 291736 sc-eQTL 7.81e-01 0.0298 0.107 0.589 PB L2
ENSG00000112303 VNN2 -843481 sc-eQTL 8.20e-01 0.0219 0.0961 0.589 PB L2
ENSG00000112306 RPS12 -894591 sc-eQTL 1.43e-01 0.0798 0.0541 0.589 PB L2
ENSG00000118507 AKAP7 784511 sc-eQTL 1.50e-02 0.251 0.101 0.589 PB L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 3.20e-01 0.102 0.102 0.589 PB L2
ENSG00000228495 LINC01013 -211910 sc-eQTL 3.70e-01 0.0603 0.067 0.589 PB L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 1.62e-01 -0.106 0.0755 0.583 Pro_T L2
ENSG00000079950 STX7 -593220 sc-eQTL 1.94e-01 0.102 0.0781 0.583 Pro_T L2
ENSG00000112282 MED23 291736 sc-eQTL 1.77e-01 0.119 0.0879 0.583 Pro_T L2
ENSG00000112303 VNN2 -843481 sc-eQTL 6.55e-01 0.0376 0.0841 0.583 Pro_T L2
ENSG00000112306 RPS12 -894591 sc-eQTL 3.23e-01 0.0315 0.0318 0.583 Pro_T L2
ENSG00000118507 AKAP7 784511 sc-eQTL 5.19e-02 -0.147 0.075 0.583 Pro_T L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 6.11e-01 0.0419 0.0823 0.583 Pro_T L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 5.97e-01 0.0449 0.0849 0.583 Treg L2
ENSG00000079950 STX7 -593220 sc-eQTL 7.91e-01 0.0226 0.085 0.583 Treg L2
ENSG00000112282 MED23 291736 sc-eQTL 4.48e-01 -0.0664 0.0873 0.583 Treg L2
ENSG00000112303 VNN2 -843481 sc-eQTL 8.93e-01 0.0096 0.0716 0.583 Treg L2
ENSG00000112306 RPS12 -894591 sc-eQTL 4.44e-01 -0.0242 0.0316 0.583 Treg L2
ENSG00000118507 AKAP7 784511 sc-eQTL 3.83e-01 0.0658 0.0752 0.583 Treg L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 6.58e-01 0.0396 0.0894 0.583 Treg L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 2.15e-01 0.0905 0.0727 0.576 cDC L2
ENSG00000079950 STX7 -593220 sc-eQTL 8.83e-01 0.0107 0.0726 0.576 cDC L2
ENSG00000093134 VNN3 -814787 sc-eQTL 6.02e-01 0.0377 0.0721 0.576 cDC L2
ENSG00000112282 MED23 291736 sc-eQTL 3.55e-01 -0.0869 0.0936 0.576 cDC L2
ENSG00000112299 VNN1 -794077 sc-eQTL 4.65e-01 -0.062 0.0847 0.576 cDC L2
ENSG00000112303 VNN2 -843481 sc-eQTL 8.53e-01 -0.0154 0.0826 0.576 cDC L2
ENSG00000112306 RPS12 -894591 sc-eQTL 8.77e-01 -0.00631 0.0408 0.576 cDC L2
ENSG00000118507 AKAP7 784511 sc-eQTL 9.29e-02 0.153 0.0903 0.576 cDC L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 1.89e-01 -0.106 0.0804 0.576 cDC L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 6.97e-01 0.0306 0.0786 0.583 cMono_IL1B L2
ENSG00000079950 STX7 -593220 sc-eQTL 4.09e-01 -0.0457 0.0552 0.583 cMono_IL1B L2
ENSG00000093134 VNN3 -814787 sc-eQTL 9.74e-01 0.00258 0.0782 0.583 cMono_IL1B L2
ENSG00000112282 MED23 291736 sc-eQTL 9.68e-01 0.00315 0.0773 0.583 cMono_IL1B L2
ENSG00000112299 VNN1 -794077 sc-eQTL 2.11e-01 -0.0985 0.0786 0.583 cMono_IL1B L2
ENSG00000112303 VNN2 -843481 sc-eQTL 7.84e-01 0.0173 0.0631 0.583 cMono_IL1B L2
ENSG00000112306 RPS12 -894591 sc-eQTL 4.95e-02 0.0686 0.0347 0.583 cMono_IL1B L2
ENSG00000118507 AKAP7 784511 sc-eQTL 9.31e-01 0.00656 0.0753 0.583 cMono_IL1B L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 3.12e-01 -0.0683 0.0674 0.583 cMono_IL1B L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 9.15e-01 0.00878 0.0821 0.583 cMono_S100A L2
ENSG00000079950 STX7 -593220 sc-eQTL 1.52e-01 0.086 0.0598 0.583 cMono_S100A L2
ENSG00000093134 VNN3 -814787 sc-eQTL 5.88e-01 -0.0407 0.0751 0.583 cMono_S100A L2
ENSG00000112282 MED23 291736 sc-eQTL 1.66e-01 0.113 0.0812 0.583 cMono_S100A L2
ENSG00000112299 VNN1 -794077 sc-eQTL 3.73e-01 -0.0726 0.0814 0.583 cMono_S100A L2
ENSG00000112303 VNN2 -843481 sc-eQTL 9.00e-01 -0.00671 0.0534 0.583 cMono_S100A L2
ENSG00000112306 RPS12 -894591 sc-eQTL 7.08e-01 0.0144 0.0384 0.583 cMono_S100A L2
ENSG00000118507 AKAP7 784511 sc-eQTL 5.38e-01 -0.0492 0.0797 0.583 cMono_S100A L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 9.93e-01 0.000625 0.0712 0.583 cMono_S100A L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 5.22e-01 0.0594 0.0927 0.579 gdT L2
ENSG00000079950 STX7 -593220 sc-eQTL 9.65e-01 -0.00431 0.0972 0.579 gdT L2
ENSG00000112282 MED23 291736 sc-eQTL 9.31e-01 0.00901 0.104 0.579 gdT L2
ENSG00000112303 VNN2 -843481 sc-eQTL 4.72e-01 -0.0775 0.107 0.579 gdT L2
ENSG00000112306 RPS12 -894591 sc-eQTL 3.40e-01 0.0391 0.0408 0.579 gdT L2
ENSG00000118507 AKAP7 784511 sc-eQTL 1.27e-01 0.166 0.108 0.579 gdT L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 9.46e-01 0.00721 0.106 0.579 gdT L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 7.95e-01 0.0219 0.0839 0.587 intMono L2
ENSG00000079950 STX7 -593220 sc-eQTL 3.73e-01 0.0727 0.0813 0.587 intMono L2
ENSG00000093134 VNN3 -814787 sc-eQTL 6.40e-01 -0.0385 0.0822 0.587 intMono L2
ENSG00000112282 MED23 291736 sc-eQTL 4.53e-01 0.0679 0.0903 0.587 intMono L2
ENSG00000112299 VNN1 -794077 sc-eQTL 3.81e-01 -0.0713 0.0812 0.587 intMono L2
ENSG00000112303 VNN2 -843481 sc-eQTL 8.34e-01 0.0174 0.0827 0.587 intMono L2
ENSG00000112306 RPS12 -894591 sc-eQTL 3.08e-02 0.0774 0.0356 0.587 intMono L2
ENSG00000118507 AKAP7 784511 sc-eQTL 6.84e-01 0.0359 0.0882 0.587 intMono L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 5.25e-01 0.0557 0.0875 0.587 intMono L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 3.25e-01 0.0773 0.0783 0.584 ncMono L2
ENSG00000079950 STX7 -593220 sc-eQTL 2.69e-01 0.0662 0.0596 0.584 ncMono L2
ENSG00000093134 VNN3 -814787 sc-eQTL 8.33e-01 -0.0178 0.0844 0.584 ncMono L2
ENSG00000112282 MED23 291736 sc-eQTL 4.92e-01 0.0588 0.0854 0.584 ncMono L2
ENSG00000112299 VNN1 -794077 sc-eQTL 2.31e-01 -0.1 0.0835 0.584 ncMono L2
ENSG00000112303 VNN2 -843481 sc-eQTL 5.59e-02 0.154 0.0798 0.584 ncMono L2
ENSG00000112306 RPS12 -894591 sc-eQTL 4.81e-01 0.0285 0.0404 0.584 ncMono L2
ENSG00000118507 AKAP7 784511 sc-eQTL 4.97e-01 0.0564 0.0829 0.584 ncMono L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 4.38e-01 -0.0554 0.0713 0.584 ncMono L2
ENSG00000079819 EPB41L2 856656 sc-eQTL 5.69e-01 -0.055 0.0964 0.565 pDC L2
ENSG00000079950 STX7 -593220 sc-eQTL 3.61e-01 0.0634 0.0692 0.565 pDC L2
ENSG00000093134 VNN3 -814787 sc-eQTL 8.04e-01 0.0174 0.0699 0.565 pDC L2
ENSG00000112282 MED23 291736 sc-eQTL 2.04e-01 0.124 0.097 0.565 pDC L2
ENSG00000112299 VNN1 -794077 sc-eQTL 7.74e-01 -0.0204 0.0711 0.565 pDC L2
ENSG00000112303 VNN2 -843481 sc-eQTL 3.98e-01 -0.0717 0.0845 0.565 pDC L2
ENSG00000112306 RPS12 -894591 sc-eQTL 7.70e-01 0.0171 0.0583 0.565 pDC L2
ENSG00000118507 AKAP7 784511 sc-eQTL 6.38e-01 0.0375 0.0795 0.565 pDC L2
ENSG00000146409 SLC18B1 -893361 sc-eQTL 8.59e-01 0.0154 0.0863 0.565 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 856656 sc-eQTL 5.20e-01 0.0489 0.0759 0.583 B_Memory LOneK1K
ENSG00000079931 MOXD1 -481497 sc-eQTL 7.18e-01 -0.0312 0.0861 0.583 B_Memory LOneK1K
ENSG00000079950 STX7 -593220 sc-eQTL 7.14e-01 0.0179 0.0488 0.583 B_Memory LOneK1K
ENSG00000112282 MED23 291736 sc-eQTL 5.79e-01 0.0414 0.0746 0.583 B_Memory LOneK1K
ENSG00000112303 VNN2 -843481 sc-eQTL 8.74e-01 0.0122 0.0772 0.583 B_Memory LOneK1K
ENSG00000112306 RPS12 -894591 sc-eQTL 3.63e-01 0.04 0.0439 0.583 B_Memory LOneK1K
ENSG00000118507 AKAP7 784511 sc-eQTL 5.10e-01 -0.0501 0.0758 0.583 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -893361 sc-eQTL 6.02e-01 0.0421 0.0807 0.583 B_Memory LOneK1K
ENSG00000228495 LINC01013 -211910 sc-eQTL 6.54e-02 -0.143 0.0772 0.583 B_Memory LOneK1K
ENSG00000079819 EPB41L2 856656 sc-eQTL 4.65e-02 0.127 0.0634 0.583 B_Naive LOneK1K
ENSG00000079931 MOXD1 -481497 sc-eQTL 8.46e-01 0.0178 0.0919 0.583 B_Naive LOneK1K
ENSG00000079950 STX7 -593220 sc-eQTL 1.86e-01 0.0498 0.0375 0.583 B_Naive LOneK1K
ENSG00000112282 MED23 291736 sc-eQTL 9.09e-01 0.0081 0.0708 0.583 B_Naive LOneK1K
ENSG00000112303 VNN2 -843481 sc-eQTL 5.63e-01 -0.0423 0.0732 0.583 B_Naive LOneK1K
ENSG00000112306 RPS12 -894591 sc-eQTL 7.69e-02 0.0782 0.044 0.583 B_Naive LOneK1K
ENSG00000118507 AKAP7 784511 sc-eQTL 6.46e-01 0.041 0.0892 0.583 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -893361 sc-eQTL 8.48e-02 0.144 0.083 0.583 B_Naive LOneK1K
ENSG00000228495 LINC01013 -211910 sc-eQTL 5.82e-01 0.0292 0.053 0.583 B_Naive LOneK1K
ENSG00000079819 EPB41L2 856656 sc-eQTL 4.33e-01 0.0595 0.0758 0.583 CD14_Mono LOneK1K
ENSG00000079950 STX7 -593220 sc-eQTL 9.86e-01 0.000841 0.0467 0.583 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -814787 sc-eQTL 9.63e-01 -0.00353 0.076 0.583 CD14_Mono LOneK1K
ENSG00000112282 MED23 291736 sc-eQTL 6.84e-01 0.0298 0.0731 0.583 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -794077 sc-eQTL 1.99e-01 -0.102 0.079 0.583 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -843481 sc-eQTL 6.64e-01 0.0228 0.0524 0.583 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -894591 sc-eQTL 7.37e-02 0.0641 0.0357 0.583 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 784511 sc-eQTL 5.97e-01 0.0379 0.0717 0.583 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -893361 sc-eQTL 2.87e-01 -0.0681 0.0638 0.583 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 856656 sc-eQTL 4.57e-01 0.0596 0.0801 0.586 CD16_Mono LOneK1K
ENSG00000079950 STX7 -593220 sc-eQTL 1.89e-01 0.0747 0.0567 0.586 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -814787 sc-eQTL 4.33e-01 -0.0657 0.0836 0.586 CD16_Mono LOneK1K
ENSG00000112282 MED23 291736 sc-eQTL 6.58e-01 0.0361 0.0815 0.586 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -794077 sc-eQTL 1.35e-01 -0.124 0.0825 0.586 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -843481 sc-eQTL 7.24e-02 0.14 0.0776 0.586 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -894591 sc-eQTL 2.06e-01 0.042 0.0331 0.586 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 784511 sc-eQTL 5.37e-01 0.0517 0.0836 0.586 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -893361 sc-eQTL 8.58e-01 -0.0144 0.0806 0.586 CD16_Mono LOneK1K
ENSG00000079950 STX7 -593220 sc-eQTL 4.81e-01 0.0463 0.0656 0.586 NK_CD56dim LOneK1K
ENSG00000112282 MED23 291736 sc-eQTL 7.14e-01 0.0234 0.0637 0.586 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -843481 sc-eQTL 3.73e-01 0.0741 0.083 0.586 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -894591 sc-eQTL 3.72e-01 0.0303 0.0339 0.586 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 784511 sc-eQTL 7.49e-01 0.0225 0.0703 0.586 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112303 VNN2 -843481 eQTL 0.0397 0.027 0.0131 0.0 0.0 0.425
ENSG00000118507 AKAP7 784511 eQTL 0.0347 -0.0443 0.021 0.0 0.0 0.425
ENSG00000118520 ARG1 346834 pQTL 0.00762 -0.0375 0.014 0.0 0.0 0.425
ENSG00000118520 ARG1 346834 eQTL 0.0318 -0.0401 0.0186 0.0 0.0 0.425
ENSG00000118523 CCN2 -31394 pQTL 0.000388 -0.0751 0.0211 0.0 0.0 0.425

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina