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Genes within 1Mb (chr6:131916916:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 853594 sc-eQTL 7.30e-01 0.0239 0.0692 0.327 B L1
ENSG00000079931 MOXD1 -484559 sc-eQTL 8.03e-01 -0.0252 0.101 0.327 B L1
ENSG00000079950 STX7 -596282 sc-eQTL 5.37e-01 0.0235 0.038 0.327 B L1
ENSG00000112282 MED23 288674 sc-eQTL 6.79e-01 -0.0314 0.0759 0.327 B L1
ENSG00000112303 VNN2 -846543 sc-eQTL 6.88e-01 0.0288 0.0716 0.327 B L1
ENSG00000112306 RPS12 -897653 sc-eQTL 2.64e-01 0.0483 0.0432 0.327 B L1
ENSG00000118507 AKAP7 781449 sc-eQTL 6.05e-01 0.0465 0.0898 0.327 B L1
ENSG00000146409 SLC18B1 -896423 sc-eQTL 7.18e-02 0.164 0.0904 0.327 B L1
ENSG00000228495 LINC01013 -214972 sc-eQTL 4.40e-02 0.12 0.0592 0.327 B L1
ENSG00000079819 EPB41L2 853594 sc-eQTL 9.67e-01 -0.00374 0.0895 0.327 CD4T L1
ENSG00000079950 STX7 -596282 sc-eQTL 8.63e-01 -0.0126 0.073 0.327 CD4T L1
ENSG00000112282 MED23 288674 sc-eQTL 4.23e-01 -0.0464 0.0579 0.327 CD4T L1
ENSG00000112303 VNN2 -846543 sc-eQTL 7.52e-01 0.02 0.0632 0.327 CD4T L1
ENSG00000112306 RPS12 -897653 sc-eQTL 2.07e-01 0.0542 0.0428 0.327 CD4T L1
ENSG00000118507 AKAP7 781449 sc-eQTL 1.27e-01 0.118 0.0773 0.327 CD4T L1
ENSG00000146409 SLC18B1 -896423 sc-eQTL 3.23e-01 -0.086 0.0868 0.327 CD4T L1
ENSG00000079950 STX7 -596282 sc-eQTL 5.77e-01 -0.0405 0.0725 0.327 CD8T L1
ENSG00000112282 MED23 288674 sc-eQTL 7.98e-01 0.0184 0.0715 0.327 CD8T L1
ENSG00000112303 VNN2 -846543 sc-eQTL 6.61e-01 -0.0371 0.0847 0.327 CD8T L1
ENSG00000112306 RPS12 -897653 sc-eQTL 3.51e-01 0.027 0.0289 0.327 CD8T L1
ENSG00000118507 AKAP7 781449 sc-eQTL 5.93e-01 -0.0436 0.0813 0.327 CD8T L1
ENSG00000146409 SLC18B1 -896423 sc-eQTL 6.82e-01 0.0359 0.0875 0.327 CD8T L1
ENSG00000079819 EPB41L2 853594 sc-eQTL 1.98e-01 0.0995 0.077 0.315 DC L1
ENSG00000079950 STX7 -596282 sc-eQTL 4.41e-01 -0.0526 0.0682 0.315 DC L1
ENSG00000093134 VNN3 -817849 sc-eQTL 6.94e-01 0.0333 0.0847 0.315 DC L1
ENSG00000112282 MED23 288674 sc-eQTL 3.56e-01 -0.0918 0.0992 0.315 DC L1
ENSG00000112299 VNN1 -797139 sc-eQTL 8.74e-01 0.0145 0.0914 0.315 DC L1
ENSG00000112303 VNN2 -846543 sc-eQTL 3.59e-01 0.0898 0.0976 0.315 DC L1
ENSG00000112306 RPS12 -897653 sc-eQTL 8.16e-01 0.0128 0.0548 0.315 DC L1
ENSG00000118507 AKAP7 781449 sc-eQTL 6.00e-01 0.0513 0.0977 0.315 DC L1
ENSG00000146409 SLC18B1 -896423 sc-eQTL 3.47e-01 -0.0816 0.0866 0.315 DC L1
ENSG00000079819 EPB41L2 853594 sc-eQTL 8.51e-01 -0.0156 0.0834 0.327 Mono L1
ENSG00000079950 STX7 -596282 sc-eQTL 9.24e-01 0.00477 0.0497 0.327 Mono L1
ENSG00000093134 VNN3 -817849 sc-eQTL 2.68e-01 0.0945 0.0851 0.327 Mono L1
ENSG00000112282 MED23 288674 sc-eQTL 8.35e-01 0.0169 0.081 0.327 Mono L1
ENSG00000112299 VNN1 -797139 sc-eQTL 6.59e-01 -0.0405 0.0917 0.327 Mono L1
ENSG00000112303 VNN2 -846543 sc-eQTL 6.57e-01 -0.0288 0.0647 0.327 Mono L1
ENSG00000112306 RPS12 -897653 sc-eQTL 8.18e-01 -0.00892 0.0388 0.327 Mono L1
ENSG00000118507 AKAP7 781449 sc-eQTL 4.66e-01 -0.0587 0.0803 0.327 Mono L1
ENSG00000146409 SLC18B1 -896423 sc-eQTL 8.71e-01 -0.0124 0.0768 0.327 Mono L1
ENSG00000079950 STX7 -596282 sc-eQTL 7.17e-01 -0.0268 0.0739 0.328 NK L1
ENSG00000112282 MED23 288674 sc-eQTL 4.96e-01 0.046 0.0675 0.328 NK L1
ENSG00000112303 VNN2 -846543 sc-eQTL 3.73e-01 -0.082 0.0918 0.328 NK L1
ENSG00000112306 RPS12 -897653 sc-eQTL 1.67e-01 0.0525 0.0379 0.328 NK L1
ENSG00000118507 AKAP7 781449 sc-eQTL 5.03e-02 0.158 0.0801 0.328 NK L1
ENSG00000079819 EPB41L2 853594 sc-eQTL 8.63e-02 0.143 0.0833 0.327 Other_T L1
ENSG00000079950 STX7 -596282 sc-eQTL 5.52e-01 0.0451 0.0758 0.327 Other_T L1
ENSG00000112282 MED23 288674 sc-eQTL 6.19e-01 0.0471 0.0947 0.327 Other_T L1
ENSG00000112303 VNN2 -846543 sc-eQTL 2.71e-01 0.101 0.0915 0.327 Other_T L1
ENSG00000112306 RPS12 -897653 sc-eQTL 1.90e-01 0.0476 0.0362 0.327 Other_T L1
ENSG00000118507 AKAP7 781449 sc-eQTL 3.96e-01 -0.0703 0.0827 0.327 Other_T L1
ENSG00000146409 SLC18B1 -896423 sc-eQTL 6.96e-01 -0.039 0.0996 0.327 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 853594 sc-eQTL 3.56e-01 -0.0829 0.0895 0.339 B_Activated L2
ENSG00000079931 MOXD1 -484559 sc-eQTL 5.02e-01 -0.0684 0.102 0.339 B_Activated L2
ENSG00000079950 STX7 -596282 sc-eQTL 2.54e-01 -0.109 0.0951 0.339 B_Activated L2
ENSG00000112282 MED23 288674 sc-eQTL 9.97e-01 -0.000349 0.106 0.339 B_Activated L2
ENSG00000112303 VNN2 -846543 sc-eQTL 7.54e-01 0.0319 0.102 0.339 B_Activated L2
ENSG00000112306 RPS12 -897653 sc-eQTL 4.94e-01 0.0373 0.0544 0.339 B_Activated L2
ENSG00000118507 AKAP7 781449 sc-eQTL 5.58e-01 -0.0618 0.105 0.339 B_Activated L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 2.95e-01 0.0998 0.0951 0.339 B_Activated L2
ENSG00000228495 LINC01013 -214972 sc-eQTL 3.00e-01 -0.0942 0.0906 0.339 B_Activated L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 9.01e-01 0.0118 0.0951 0.328 B_Intermediate L2
ENSG00000079931 MOXD1 -484559 sc-eQTL 3.75e-01 0.0816 0.0918 0.328 B_Intermediate L2
ENSG00000079950 STX7 -596282 sc-eQTL 4.35e-01 -0.047 0.0601 0.328 B_Intermediate L2
ENSG00000112282 MED23 288674 sc-eQTL 8.70e-01 0.015 0.0916 0.328 B_Intermediate L2
ENSG00000112303 VNN2 -846543 sc-eQTL 6.84e-01 0.0369 0.0907 0.328 B_Intermediate L2
ENSG00000112306 RPS12 -897653 sc-eQTL 7.30e-01 0.0192 0.0555 0.328 B_Intermediate L2
ENSG00000118507 AKAP7 781449 sc-eQTL 5.59e-01 0.0544 0.093 0.328 B_Intermediate L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 5.22e-01 0.0641 0.1 0.328 B_Intermediate L2
ENSG00000228495 LINC01013 -214972 sc-eQTL 9.50e-01 0.00537 0.085 0.328 B_Intermediate L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 7.06e-01 0.0337 0.0893 0.328 B_Memory L2
ENSG00000079931 MOXD1 -484559 sc-eQTL 9.10e-01 0.0105 0.0926 0.328 B_Memory L2
ENSG00000079950 STX7 -596282 sc-eQTL 8.56e-01 0.0132 0.0727 0.328 B_Memory L2
ENSG00000112282 MED23 288674 sc-eQTL 4.48e-01 -0.0711 0.0935 0.328 B_Memory L2
ENSG00000112303 VNN2 -846543 sc-eQTL 3.21e-01 0.0943 0.0948 0.328 B_Memory L2
ENSG00000112306 RPS12 -897653 sc-eQTL 1.83e-01 0.061 0.0456 0.328 B_Memory L2
ENSG00000118507 AKAP7 781449 sc-eQTL 7.83e-01 -0.0269 0.0975 0.328 B_Memory L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 9.81e-01 -0.00229 0.0956 0.328 B_Memory L2
ENSG00000228495 LINC01013 -214972 sc-eQTL 3.23e-01 0.088 0.0889 0.328 B_Memory L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 9.33e-01 0.00645 0.0764 0.327 B_Naive1 L2
ENSG00000079931 MOXD1 -484559 sc-eQTL 7.69e-01 -0.0306 0.104 0.327 B_Naive1 L2
ENSG00000079950 STX7 -596282 sc-eQTL 6.78e-01 0.0189 0.0454 0.327 B_Naive1 L2
ENSG00000112282 MED23 288674 sc-eQTL 4.06e-01 0.0676 0.0812 0.327 B_Naive1 L2
ENSG00000112303 VNN2 -846543 sc-eQTL 4.83e-01 0.0619 0.088 0.327 B_Naive1 L2
ENSG00000112306 RPS12 -897653 sc-eQTL 1.18e-01 0.0784 0.0499 0.327 B_Naive1 L2
ENSG00000118507 AKAP7 781449 sc-eQTL 4.07e-01 0.0844 0.102 0.327 B_Naive1 L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 1.52e-01 0.139 0.0964 0.327 B_Naive1 L2
ENSG00000228495 LINC01013 -214972 sc-eQTL 3.01e-02 0.139 0.0634 0.327 B_Naive1 L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 5.12e-01 0.0569 0.0865 0.328 B_Naive2 L2
ENSG00000079931 MOXD1 -484559 sc-eQTL 5.39e-01 -0.0604 0.0981 0.328 B_Naive2 L2
ENSG00000079950 STX7 -596282 sc-eQTL 4.44e-01 0.041 0.0534 0.328 B_Naive2 L2
ENSG00000112282 MED23 288674 sc-eQTL 4.11e-01 -0.0812 0.0986 0.328 B_Naive2 L2
ENSG00000112303 VNN2 -846543 sc-eQTL 2.02e-01 -0.125 0.0978 0.328 B_Naive2 L2
ENSG00000112306 RPS12 -897653 sc-eQTL 3.52e-01 0.0484 0.0519 0.328 B_Naive2 L2
ENSG00000118507 AKAP7 781449 sc-eQTL 9.23e-01 0.01 0.104 0.328 B_Naive2 L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 6.45e-01 -0.0458 0.0991 0.328 B_Naive2 L2
ENSG00000228495 LINC01013 -214972 sc-eQTL 1.97e-02 0.16 0.0679 0.328 B_Naive2 L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 6.55e-01 0.0367 0.082 0.318 CD4_CTL L2
ENSG00000079950 STX7 -596282 sc-eQTL 6.14e-01 0.0511 0.101 0.318 CD4_CTL L2
ENSG00000112282 MED23 288674 sc-eQTL 1.19e-01 0.164 0.105 0.318 CD4_CTL L2
ENSG00000112303 VNN2 -846543 sc-eQTL 4.07e-01 0.0847 0.102 0.318 CD4_CTL L2
ENSG00000112306 RPS12 -897653 sc-eQTL 7.45e-01 -0.0153 0.0471 0.318 CD4_CTL L2
ENSG00000118507 AKAP7 781449 sc-eQTL 5.02e-01 0.0677 0.101 0.318 CD4_CTL L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 5.23e-01 -0.0608 0.095 0.318 CD4_CTL L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 5.99e-01 -0.0488 0.0925 0.327 CD4_Naive L2
ENSG00000079950 STX7 -596282 sc-eQTL 2.48e-01 -0.0907 0.0783 0.327 CD4_Naive L2
ENSG00000112282 MED23 288674 sc-eQTL 6.58e-01 -0.0298 0.0671 0.327 CD4_Naive L2
ENSG00000112303 VNN2 -846543 sc-eQTL 5.11e-01 0.0478 0.0727 0.327 CD4_Naive L2
ENSG00000112306 RPS12 -897653 sc-eQTL 5.97e-01 0.025 0.0472 0.327 CD4_Naive L2
ENSG00000118507 AKAP7 781449 sc-eQTL 4.64e-01 0.0643 0.0876 0.327 CD4_Naive L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 1.48e-01 -0.131 0.0904 0.327 CD4_Naive L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 4.51e-01 0.0725 0.096 0.327 CD4_TCM L2
ENSG00000079950 STX7 -596282 sc-eQTL 2.30e-01 0.105 0.0875 0.327 CD4_TCM L2
ENSG00000112282 MED23 288674 sc-eQTL 6.17e-01 0.037 0.0738 0.327 CD4_TCM L2
ENSG00000112303 VNN2 -846543 sc-eQTL 3.33e-01 -0.0839 0.0864 0.327 CD4_TCM L2
ENSG00000112306 RPS12 -897653 sc-eQTL 3.03e-01 0.0462 0.0448 0.327 CD4_TCM L2
ENSG00000118507 AKAP7 781449 sc-eQTL 9.38e-03 0.221 0.0843 0.327 CD4_TCM L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 8.09e-01 -0.0252 0.104 0.327 CD4_TCM L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 2.37e-01 0.119 0.1 0.327 CD4_TEM L2
ENSG00000079950 STX7 -596282 sc-eQTL 5.17e-01 0.065 0.1 0.327 CD4_TEM L2
ENSG00000112282 MED23 288674 sc-eQTL 7.13e-02 -0.166 0.0917 0.327 CD4_TEM L2
ENSG00000112303 VNN2 -846543 sc-eQTL 1.42e-01 0.141 0.0958 0.327 CD4_TEM L2
ENSG00000112306 RPS12 -897653 sc-eQTL 2.73e-01 0.0433 0.0394 0.327 CD4_TEM L2
ENSG00000118507 AKAP7 781449 sc-eQTL 8.58e-01 0.0182 0.102 0.327 CD4_TEM L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 9.22e-01 -0.0096 0.0981 0.327 CD4_TEM L2
ENSG00000079950 STX7 -596282 sc-eQTL 8.46e-01 0.0161 0.0827 0.327 CD8_CTL L2
ENSG00000112282 MED23 288674 sc-eQTL 4.70e-02 0.168 0.084 0.327 CD8_CTL L2
ENSG00000112303 VNN2 -846543 sc-eQTL 6.61e-01 0.0412 0.094 0.327 CD8_CTL L2
ENSG00000112306 RPS12 -897653 sc-eQTL 3.61e-01 0.046 0.0502 0.327 CD8_CTL L2
ENSG00000118507 AKAP7 781449 sc-eQTL 5.67e-01 -0.0543 0.0948 0.327 CD8_CTL L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 3.31e-01 0.0948 0.0973 0.327 CD8_CTL L2
ENSG00000079950 STX7 -596282 sc-eQTL 8.76e-01 -0.0155 0.0995 0.327 CD8_Naive L2
ENSG00000112282 MED23 288674 sc-eQTL 3.79e-01 -0.0704 0.0799 0.327 CD8_Naive L2
ENSG00000112303 VNN2 -846543 sc-eQTL 2.42e-01 -0.101 0.0856 0.327 CD8_Naive L2
ENSG00000112306 RPS12 -897653 sc-eQTL 1.98e-01 0.0633 0.049 0.327 CD8_Naive L2
ENSG00000118507 AKAP7 781449 sc-eQTL 6.77e-01 0.0376 0.0903 0.327 CD8_Naive L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 3.30e-01 -0.0962 0.0984 0.327 CD8_Naive L2
ENSG00000079950 STX7 -596282 sc-eQTL 2.73e-02 -0.222 0.0999 0.326 CD8_TCM L2
ENSG00000112282 MED23 288674 sc-eQTL 3.32e-01 0.0984 0.101 0.326 CD8_TCM L2
ENSG00000112303 VNN2 -846543 sc-eQTL 5.45e-01 0.0608 0.1 0.326 CD8_TCM L2
ENSG00000112306 RPS12 -897653 sc-eQTL 2.34e-01 0.0582 0.0487 0.326 CD8_TCM L2
ENSG00000118507 AKAP7 781449 sc-eQTL 8.72e-01 -0.0176 0.109 0.326 CD8_TCM L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 1.51e-01 -0.154 0.107 0.326 CD8_TCM L2
ENSG00000079950 STX7 -596282 sc-eQTL 4.84e-01 -0.0724 0.103 0.331 CD8_TEM L2
ENSG00000112282 MED23 288674 sc-eQTL 6.41e-02 -0.184 0.0986 0.331 CD8_TEM L2
ENSG00000112303 VNN2 -846543 sc-eQTL 6.51e-01 -0.0465 0.103 0.331 CD8_TEM L2
ENSG00000112306 RPS12 -897653 sc-eQTL 3.56e-01 0.051 0.0551 0.331 CD8_TEM L2
ENSG00000118507 AKAP7 781449 sc-eQTL 5.62e-01 0.0588 0.101 0.331 CD8_TEM L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 8.73e-01 0.0167 0.104 0.331 CD8_TEM L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 2.09e-01 0.121 0.0959 0.327 MAIT L2
ENSG00000079950 STX7 -596282 sc-eQTL 2.63e-01 0.112 0.0999 0.327 MAIT L2
ENSG00000112282 MED23 288674 sc-eQTL 4.34e-01 0.0821 0.105 0.327 MAIT L2
ENSG00000112303 VNN2 -846543 sc-eQTL 7.22e-01 0.0363 0.102 0.327 MAIT L2
ENSG00000112306 RPS12 -897653 sc-eQTL 6.94e-01 0.0197 0.0501 0.327 MAIT L2
ENSG00000118507 AKAP7 781449 sc-eQTL 2.98e-01 -0.108 0.103 0.327 MAIT L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 4.17e-01 0.0854 0.105 0.327 MAIT L2
ENSG00000079950 STX7 -596282 sc-eQTL 8.22e-01 -0.0225 0.1 0.329 NK_CD56bright L2
ENSG00000112282 MED23 288674 sc-eQTL 8.71e-01 0.0172 0.106 0.329 NK_CD56bright L2
ENSG00000112303 VNN2 -846543 sc-eQTL 1.24e-01 -0.156 0.101 0.329 NK_CD56bright L2
ENSG00000112306 RPS12 -897653 sc-eQTL 1.49e-01 0.0817 0.0564 0.329 NK_CD56bright L2
ENSG00000118507 AKAP7 781449 sc-eQTL 6.71e-01 0.0437 0.103 0.329 NK_CD56bright L2
ENSG00000079950 STX7 -596282 sc-eQTL 3.33e-01 -0.0766 0.079 0.33 NK_CD56dim L2
ENSG00000112282 MED23 288674 sc-eQTL 9.48e-01 0.00535 0.0814 0.33 NK_CD56dim L2
ENSG00000112303 VNN2 -846543 sc-eQTL 8.76e-01 -0.0155 0.099 0.33 NK_CD56dim L2
ENSG00000112306 RPS12 -897653 sc-eQTL 8.37e-02 0.0678 0.039 0.33 NK_CD56dim L2
ENSG00000118507 AKAP7 781449 sc-eQTL 1.35e-01 0.129 0.0859 0.33 NK_CD56dim L2
ENSG00000079950 STX7 -596282 sc-eQTL 4.82e-01 0.0705 0.0999 0.331 NK_HLA L2
ENSG00000112282 MED23 288674 sc-eQTL 8.50e-01 0.0191 0.101 0.331 NK_HLA L2
ENSG00000112303 VNN2 -846543 sc-eQTL 7.76e-01 -0.0288 0.101 0.331 NK_HLA L2
ENSG00000112306 RPS12 -897653 sc-eQTL 9.07e-01 -0.00552 0.0472 0.331 NK_HLA L2
ENSG00000118507 AKAP7 781449 sc-eQTL 4.77e-01 0.0746 0.105 0.331 NK_HLA L2
ENSG00000079950 STX7 -596282 sc-eQTL 9.75e-01 0.00279 0.0872 0.33 NK_cytokine L2
ENSG00000112282 MED23 288674 sc-eQTL 8.20e-01 -0.0205 0.0902 0.33 NK_cytokine L2
ENSG00000112303 VNN2 -846543 sc-eQTL 6.14e-01 -0.0495 0.098 0.33 NK_cytokine L2
ENSG00000112306 RPS12 -897653 sc-eQTL 5.05e-02 0.104 0.0527 0.33 NK_cytokine L2
ENSG00000118507 AKAP7 781449 sc-eQTL 2.48e-01 0.105 0.0907 0.33 NK_cytokine L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 2.10e-01 -0.16 0.127 0.337 PB L2
ENSG00000079931 MOXD1 -484559 sc-eQTL 1.96e-01 0.137 0.105 0.337 PB L2
ENSG00000079950 STX7 -596282 sc-eQTL 3.14e-01 0.0891 0.0882 0.337 PB L2
ENSG00000112282 MED23 288674 sc-eQTL 8.69e-01 0.0199 0.12 0.337 PB L2
ENSG00000112303 VNN2 -846543 sc-eQTL 8.11e-01 0.026 0.108 0.337 PB L2
ENSG00000112306 RPS12 -897653 sc-eQTL 5.64e-01 0.0355 0.0614 0.337 PB L2
ENSG00000118507 AKAP7 781449 sc-eQTL 5.04e-01 -0.0785 0.117 0.337 PB L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 5.88e-01 0.0625 0.115 0.337 PB L2
ENSG00000228495 LINC01013 -214972 sc-eQTL 8.55e-01 0.0139 0.0757 0.337 PB L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 5.73e-01 0.0493 0.0873 0.328 Pro_T L2
ENSG00000079950 STX7 -596282 sc-eQTL 4.55e-01 0.0675 0.0902 0.328 Pro_T L2
ENSG00000112282 MED23 288674 sc-eQTL 5.31e-02 -0.196 0.101 0.328 Pro_T L2
ENSG00000112303 VNN2 -846543 sc-eQTL 2.53e-01 0.111 0.0966 0.328 Pro_T L2
ENSG00000112306 RPS12 -897653 sc-eQTL 7.61e-01 -0.0112 0.0366 0.328 Pro_T L2
ENSG00000118507 AKAP7 781449 sc-eQTL 4.49e-01 -0.066 0.087 0.328 Pro_T L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 3.74e-01 -0.0843 0.0947 0.328 Pro_T L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 7.07e-01 -0.0366 0.0971 0.327 Treg L2
ENSG00000079950 STX7 -596282 sc-eQTL 2.92e-01 -0.103 0.0969 0.327 Treg L2
ENSG00000112282 MED23 288674 sc-eQTL 9.26e-01 -0.0093 0.0999 0.327 Treg L2
ENSG00000112303 VNN2 -846543 sc-eQTL 6.97e-01 0.0319 0.0817 0.327 Treg L2
ENSG00000112306 RPS12 -897653 sc-eQTL 4.16e-01 0.0295 0.0361 0.327 Treg L2
ENSG00000118507 AKAP7 781449 sc-eQTL 4.43e-01 0.0662 0.086 0.327 Treg L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 6.73e-01 -0.0432 0.102 0.327 Treg L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 4.03e-02 0.178 0.0862 0.315 cDC L2
ENSG00000079950 STX7 -596282 sc-eQTL 4.61e-01 -0.0639 0.0866 0.315 cDC L2
ENSG00000093134 VNN3 -817849 sc-eQTL 6.38e-01 -0.0406 0.0861 0.315 cDC L2
ENSG00000112282 MED23 288674 sc-eQTL 4.94e-01 -0.0767 0.112 0.315 cDC L2
ENSG00000112299 VNN1 -797139 sc-eQTL 5.34e-01 -0.0631 0.101 0.315 cDC L2
ENSG00000112303 VNN2 -846543 sc-eQTL 2.27e-01 0.119 0.0983 0.315 cDC L2
ENSG00000112306 RPS12 -897653 sc-eQTL 7.46e-01 -0.0158 0.0487 0.315 cDC L2
ENSG00000118507 AKAP7 781449 sc-eQTL 8.67e-01 0.0183 0.109 0.315 cDC L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 1.91e-01 -0.126 0.0961 0.315 cDC L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 6.12e-01 -0.0459 0.0905 0.327 cMono_IL1B L2
ENSG00000079950 STX7 -596282 sc-eQTL 5.86e-01 -0.0348 0.0637 0.327 cMono_IL1B L2
ENSG00000093134 VNN3 -817849 sc-eQTL 4.06e-01 0.0748 0.0899 0.327 cMono_IL1B L2
ENSG00000112282 MED23 288674 sc-eQTL 7.45e-01 0.029 0.089 0.327 cMono_IL1B L2
ENSG00000112299 VNN1 -797139 sc-eQTL 3.92e-01 -0.0778 0.0907 0.327 cMono_IL1B L2
ENSG00000112303 VNN2 -846543 sc-eQTL 7.41e-01 0.0241 0.0726 0.327 cMono_IL1B L2
ENSG00000112306 RPS12 -897653 sc-eQTL 9.22e-01 -0.00396 0.0403 0.327 cMono_IL1B L2
ENSG00000118507 AKAP7 781449 sc-eQTL 4.69e-01 -0.0628 0.0866 0.327 cMono_IL1B L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 4.12e-01 0.0638 0.0777 0.327 cMono_IL1B L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 5.64e-01 -0.0546 0.0946 0.327 cMono_S100A L2
ENSG00000079950 STX7 -596282 sc-eQTL 3.89e-01 0.0598 0.0692 0.327 cMono_S100A L2
ENSG00000093134 VNN3 -817849 sc-eQTL 4.12e-01 0.071 0.0865 0.327 cMono_S100A L2
ENSG00000112282 MED23 288674 sc-eQTL 7.22e-01 0.0335 0.094 0.327 cMono_S100A L2
ENSG00000112299 VNN1 -797139 sc-eQTL 8.73e-01 -0.015 0.094 0.327 cMono_S100A L2
ENSG00000112303 VNN2 -846543 sc-eQTL 3.83e-01 -0.0537 0.0615 0.327 cMono_S100A L2
ENSG00000112306 RPS12 -897653 sc-eQTL 7.73e-01 -0.0128 0.0444 0.327 cMono_S100A L2
ENSG00000118507 AKAP7 781449 sc-eQTL 5.77e-01 -0.0513 0.092 0.327 cMono_S100A L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 8.18e-01 -0.0189 0.0821 0.327 cMono_S100A L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 2.51e-02 0.225 0.0995 0.333 gdT L2
ENSG00000079950 STX7 -596282 sc-eQTL 1.15e-01 0.167 0.105 0.333 gdT L2
ENSG00000112282 MED23 288674 sc-eQTL 2.07e-01 0.143 0.113 0.333 gdT L2
ENSG00000112303 VNN2 -846543 sc-eQTL 6.46e-02 0.216 0.116 0.333 gdT L2
ENSG00000112306 RPS12 -897653 sc-eQTL 6.25e-01 0.0219 0.0447 0.333 gdT L2
ENSG00000118507 AKAP7 781449 sc-eQTL 9.51e-01 0.00729 0.119 0.333 gdT L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 6.89e-01 -0.0462 0.115 0.333 gdT L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 4.67e-01 0.0699 0.0959 0.327 intMono L2
ENSG00000079950 STX7 -596282 sc-eQTL 4.40e-01 -0.072 0.0931 0.327 intMono L2
ENSG00000093134 VNN3 -817849 sc-eQTL 5.35e-01 0.0585 0.0941 0.327 intMono L2
ENSG00000112282 MED23 288674 sc-eQTL 2.81e-01 0.111 0.103 0.327 intMono L2
ENSG00000112299 VNN1 -797139 sc-eQTL 2.64e-01 0.104 0.0928 0.327 intMono L2
ENSG00000112303 VNN2 -846543 sc-eQTL 2.57e-02 -0.21 0.0934 0.327 intMono L2
ENSG00000112306 RPS12 -897653 sc-eQTL 6.30e-01 0.0199 0.0411 0.327 intMono L2
ENSG00000118507 AKAP7 781449 sc-eQTL 3.33e-01 -0.0978 0.101 0.327 intMono L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 7.33e-01 0.0342 0.1 0.327 intMono L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 3.51e-01 0.0877 0.0937 0.326 ncMono L2
ENSG00000079950 STX7 -596282 sc-eQTL 6.92e-01 0.0284 0.0716 0.326 ncMono L2
ENSG00000093134 VNN3 -817849 sc-eQTL 5.04e-01 0.0675 0.101 0.326 ncMono L2
ENSG00000112282 MED23 288674 sc-eQTL 3.09e-01 -0.104 0.102 0.326 ncMono L2
ENSG00000112299 VNN1 -797139 sc-eQTL 5.04e-01 -0.0671 0.1 0.326 ncMono L2
ENSG00000112303 VNN2 -846543 sc-eQTL 3.20e-01 -0.096 0.0962 0.326 ncMono L2
ENSG00000112306 RPS12 -897653 sc-eQTL 1.43e-02 0.118 0.0476 0.326 ncMono L2
ENSG00000118507 AKAP7 781449 sc-eQTL 4.23e-01 0.0796 0.0991 0.326 ncMono L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 6.79e-01 0.0353 0.0854 0.326 ncMono L2
ENSG00000079819 EPB41L2 853594 sc-eQTL 8.65e-01 -0.0196 0.115 0.316 pDC L2
ENSG00000079950 STX7 -596282 sc-eQTL 9.75e-01 0.00259 0.083 0.316 pDC L2
ENSG00000093134 VNN3 -817849 sc-eQTL 1.28e-01 0.127 0.083 0.316 pDC L2
ENSG00000112282 MED23 288674 sc-eQTL 6.16e-01 0.0586 0.116 0.316 pDC L2
ENSG00000112299 VNN1 -797139 sc-eQTL 8.25e-02 0.147 0.0842 0.316 pDC L2
ENSG00000112303 VNN2 -846543 sc-eQTL 5.41e-01 0.062 0.101 0.316 pDC L2
ENSG00000112306 RPS12 -897653 sc-eQTL 2.87e-01 -0.0742 0.0695 0.316 pDC L2
ENSG00000118507 AKAP7 781449 sc-eQTL 5.91e-01 -0.0511 0.095 0.316 pDC L2
ENSG00000146409 SLC18B1 -896423 sc-eQTL 5.80e-01 -0.0573 0.103 0.316 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 853594 sc-eQTL 6.06e-01 -0.0448 0.0868 0.327 B_Memory LOneK1K
ENSG00000079931 MOXD1 -484559 sc-eQTL 6.19e-01 -0.049 0.0983 0.327 B_Memory LOneK1K
ENSG00000079950 STX7 -596282 sc-eQTL 4.60e-01 -0.0412 0.0557 0.327 B_Memory LOneK1K
ENSG00000112282 MED23 288674 sc-eQTL 3.05e-01 -0.0875 0.0851 0.327 B_Memory LOneK1K
ENSG00000112303 VNN2 -846543 sc-eQTL 3.66e-01 0.0798 0.088 0.327 B_Memory LOneK1K
ENSG00000112306 RPS12 -897653 sc-eQTL 7.22e-01 0.0179 0.0502 0.327 B_Memory LOneK1K
ENSG00000118507 AKAP7 781449 sc-eQTL 5.73e-01 -0.0489 0.0866 0.327 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -896423 sc-eQTL 7.92e-01 0.0243 0.0922 0.327 B_Memory LOneK1K
ENSG00000228495 LINC01013 -214972 sc-eQTL 9.96e-01 0.000473 0.0889 0.327 B_Memory LOneK1K
ENSG00000079819 EPB41L2 853594 sc-eQTL 7.37e-01 0.0246 0.0733 0.327 B_Naive LOneK1K
ENSG00000079931 MOXD1 -484559 sc-eQTL 7.32e-01 -0.0361 0.105 0.327 B_Naive LOneK1K
ENSG00000079950 STX7 -596282 sc-eQTL 5.97e-01 0.0229 0.0432 0.327 B_Naive LOneK1K
ENSG00000112282 MED23 288674 sc-eQTL 7.01e-01 0.0312 0.0811 0.327 B_Naive LOneK1K
ENSG00000112303 VNN2 -846543 sc-eQTL 6.19e-01 -0.0417 0.0839 0.327 B_Naive LOneK1K
ENSG00000112306 RPS12 -897653 sc-eQTL 2.37e-01 0.06 0.0506 0.327 B_Naive LOneK1K
ENSG00000118507 AKAP7 781449 sc-eQTL 5.66e-01 0.0588 0.102 0.327 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -896423 sc-eQTL 2.07e-01 0.121 0.0954 0.327 B_Naive LOneK1K
ENSG00000228495 LINC01013 -214972 sc-eQTL 1.01e-02 0.155 0.0599 0.327 B_Naive LOneK1K
ENSG00000079819 EPB41L2 853594 sc-eQTL 4.04e-01 -0.0727 0.0869 0.327 CD14_Mono LOneK1K
ENSG00000079950 STX7 -596282 sc-eQTL 9.81e-01 0.00129 0.0535 0.327 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -817849 sc-eQTL 2.97e-01 0.091 0.087 0.327 CD14_Mono LOneK1K
ENSG00000112282 MED23 288674 sc-eQTL 7.00e-01 0.0324 0.0838 0.327 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -797139 sc-eQTL 5.98e-01 -0.048 0.0909 0.327 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -846543 sc-eQTL 7.95e-01 -0.0156 0.0601 0.327 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -897653 sc-eQTL 8.94e-01 -0.00552 0.0412 0.327 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 781449 sc-eQTL 5.78e-01 -0.0459 0.0822 0.327 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -896423 sc-eQTL 8.58e-01 0.0132 0.0734 0.327 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 853594 sc-eQTL 3.20e-01 0.0941 0.0944 0.328 CD16_Mono LOneK1K
ENSG00000079950 STX7 -596282 sc-eQTL 8.57e-01 0.0121 0.0671 0.328 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -817849 sc-eQTL 1.92e-01 0.129 0.0984 0.328 CD16_Mono LOneK1K
ENSG00000112282 MED23 288674 sc-eQTL 7.87e-01 -0.026 0.0962 0.328 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -797139 sc-eQTL 7.29e-01 -0.034 0.0978 0.328 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -846543 sc-eQTL 1.10e-01 -0.147 0.0917 0.328 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -897653 sc-eQTL 4.04e-02 0.0799 0.0388 0.328 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 781449 sc-eQTL 4.43e-01 -0.0758 0.0986 0.328 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -896423 sc-eQTL 6.96e-01 0.0372 0.095 0.328 CD16_Mono LOneK1K
ENSG00000079950 STX7 -596282 sc-eQTL 8.84e-01 -0.0109 0.0743 0.33 NK_CD56dim LOneK1K
ENSG00000112282 MED23 288674 sc-eQTL 6.55e-01 0.0323 0.0721 0.33 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -846543 sc-eQTL 6.29e-01 -0.0455 0.094 0.33 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -897653 sc-eQTL 1.28e-01 0.0584 0.0382 0.33 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 781449 sc-eQTL 1.18e-01 0.124 0.0792 0.33 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000118520 ARG1 343772 pQTL 0.0103 -0.0385 0.015 0.0 0.0 0.312

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina