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Genes within 1Mb (chr6:131915549:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 852227 sc-eQTL 3.71e-01 0.0595 0.0664 0.286 B L1
ENSG00000079931 MOXD1 -485926 sc-eQTL 8.92e-01 -0.0132 0.097 0.286 B L1
ENSG00000079950 STX7 -597649 sc-eQTL 9.87e-01 0.00059 0.0366 0.286 B L1
ENSG00000112282 MED23 287307 sc-eQTL 4.63e-01 0.0535 0.0729 0.286 B L1
ENSG00000112303 VNN2 -847910 sc-eQTL 4.49e-01 0.0521 0.0687 0.286 B L1
ENSG00000112306 RPS12 -899020 sc-eQTL 3.97e-01 0.0352 0.0415 0.286 B L1
ENSG00000118507 AKAP7 780082 sc-eQTL 9.95e-01 -0.000499 0.0864 0.286 B L1
ENSG00000146409 SLC18B1 -897790 sc-eQTL 7.87e-01 0.0236 0.0875 0.286 B L1
ENSG00000228495 LINC01013 -216339 sc-eQTL 1.63e-02 0.137 0.0567 0.286 B L1
ENSG00000079819 EPB41L2 852227 sc-eQTL 1.99e-01 -0.113 0.0876 0.286 CD4T L1
ENSG00000079950 STX7 -597649 sc-eQTL 3.84e-01 -0.0625 0.0717 0.286 CD4T L1
ENSG00000112282 MED23 287307 sc-eQTL 5.08e-01 -0.0378 0.0569 0.286 CD4T L1
ENSG00000112303 VNN2 -847910 sc-eQTL 6.44e-01 0.0288 0.0621 0.286 CD4T L1
ENSG00000112306 RPS12 -899020 sc-eQTL 6.22e-01 -0.0209 0.0422 0.286 CD4T L1
ENSG00000118507 AKAP7 780082 sc-eQTL 6.10e-01 0.039 0.0764 0.286 CD4T L1
ENSG00000146409 SLC18B1 -897790 sc-eQTL 1.62e-01 -0.12 0.0851 0.286 CD4T L1
ENSG00000079950 STX7 -597649 sc-eQTL 9.08e-01 -0.00824 0.071 0.286 CD8T L1
ENSG00000112282 MED23 287307 sc-eQTL 3.43e-01 0.0664 0.0698 0.286 CD8T L1
ENSG00000112303 VNN2 -847910 sc-eQTL 6.55e-01 -0.0371 0.0829 0.286 CD8T L1
ENSG00000112306 RPS12 -899020 sc-eQTL 8.77e-02 0.0483 0.0281 0.286 CD8T L1
ENSG00000118507 AKAP7 780082 sc-eQTL 5.63e-01 0.0461 0.0796 0.286 CD8T L1
ENSG00000146409 SLC18B1 -897790 sc-eQTL 2.89e-01 0.0908 0.0854 0.286 CD8T L1
ENSG00000079819 EPB41L2 852227 sc-eQTL 8.00e-01 -0.0185 0.073 0.275 DC L1
ENSG00000079950 STX7 -597649 sc-eQTL 7.57e-01 -0.0199 0.0644 0.275 DC L1
ENSG00000093134 VNN3 -819216 sc-eQTL 5.47e-01 0.0481 0.0798 0.275 DC L1
ENSG00000112282 MED23 287307 sc-eQTL 6.23e-01 0.0462 0.0937 0.275 DC L1
ENSG00000112299 VNN1 -798506 sc-eQTL 8.74e-01 -0.0137 0.0862 0.275 DC L1
ENSG00000112303 VNN2 -847910 sc-eQTL 2.25e-01 0.112 0.0919 0.275 DC L1
ENSG00000112306 RPS12 -899020 sc-eQTL 9.99e-01 -8.22e-05 0.0517 0.275 DC L1
ENSG00000118507 AKAP7 780082 sc-eQTL 3.22e-01 -0.0913 0.092 0.275 DC L1
ENSG00000146409 SLC18B1 -897790 sc-eQTL 9.03e-01 -0.01 0.0819 0.275 DC L1
ENSG00000079819 EPB41L2 852227 sc-eQTL 4.52e-01 -0.0612 0.0811 0.286 Mono L1
ENSG00000079950 STX7 -597649 sc-eQTL 5.93e-01 -0.0259 0.0484 0.286 Mono L1
ENSG00000093134 VNN3 -819216 sc-eQTL 5.94e-01 -0.0443 0.0831 0.286 Mono L1
ENSG00000112282 MED23 287307 sc-eQTL 9.07e-01 -0.00919 0.079 0.286 Mono L1
ENSG00000112299 VNN1 -798506 sc-eQTL 1.29e-01 -0.136 0.0889 0.286 Mono L1
ENSG00000112303 VNN2 -847910 sc-eQTL 3.86e-02 -0.13 0.0625 0.286 Mono L1
ENSG00000112306 RPS12 -899020 sc-eQTL 9.06e-01 0.00447 0.0378 0.286 Mono L1
ENSG00000118507 AKAP7 780082 sc-eQTL 9.70e-01 0.00295 0.0784 0.286 Mono L1
ENSG00000146409 SLC18B1 -897790 sc-eQTL 9.43e-01 -0.00537 0.0748 0.286 Mono L1
ENSG00000079950 STX7 -597649 sc-eQTL 8.53e-01 -0.0135 0.0727 0.285 NK L1
ENSG00000112282 MED23 287307 sc-eQTL 2.21e-01 0.0814 0.0663 0.285 NK L1
ENSG00000112303 VNN2 -847910 sc-eQTL 1.56e-01 -0.128 0.0901 0.285 NK L1
ENSG00000112306 RPS12 -899020 sc-eQTL 9.46e-01 0.00254 0.0375 0.285 NK L1
ENSG00000118507 AKAP7 780082 sc-eQTL 3.52e-01 0.0741 0.0794 0.285 NK L1
ENSG00000079819 EPB41L2 852227 sc-eQTL 4.21e-01 -0.0662 0.082 0.286 Other_T L1
ENSG00000079950 STX7 -597649 sc-eQTL 4.24e-01 -0.0595 0.0742 0.286 Other_T L1
ENSG00000112282 MED23 287307 sc-eQTL 7.71e-01 0.027 0.0928 0.286 Other_T L1
ENSG00000112303 VNN2 -847910 sc-eQTL 6.11e-01 -0.0457 0.0899 0.286 Other_T L1
ENSG00000112306 RPS12 -899020 sc-eQTL 7.92e-01 -0.00943 0.0356 0.286 Other_T L1
ENSG00000118507 AKAP7 780082 sc-eQTL 5.87e-01 0.0441 0.0811 0.286 Other_T L1
ENSG00000146409 SLC18B1 -897790 sc-eQTL 5.28e-01 -0.0616 0.0975 0.286 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 852227 sc-eQTL 8.69e-01 0.0149 0.0906 0.286 B_Activated L2
ENSG00000079931 MOXD1 -485926 sc-eQTL 3.70e-01 -0.0923 0.103 0.286 B_Activated L2
ENSG00000079950 STX7 -597649 sc-eQTL 7.38e-01 -0.0323 0.0964 0.286 B_Activated L2
ENSG00000112282 MED23 287307 sc-eQTL 1.07e-01 0.172 0.106 0.286 B_Activated L2
ENSG00000112303 VNN2 -847910 sc-eQTL 8.77e-01 -0.0159 0.103 0.286 B_Activated L2
ENSG00000112306 RPS12 -899020 sc-eQTL 7.73e-01 -0.0159 0.055 0.286 B_Activated L2
ENSG00000118507 AKAP7 780082 sc-eQTL 2.43e-01 -0.124 0.106 0.286 B_Activated L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 1.11e-01 0.153 0.0956 0.286 B_Activated L2
ENSG00000228495 LINC01013 -216339 sc-eQTL 7.52e-01 0.0291 0.0918 0.286 B_Activated L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 3.04e-01 0.0968 0.094 0.288 B_Intermediate L2
ENSG00000079931 MOXD1 -485926 sc-eQTL 4.23e-01 -0.073 0.091 0.288 B_Intermediate L2
ENSG00000079950 STX7 -597649 sc-eQTL 9.15e-01 0.00634 0.0596 0.288 B_Intermediate L2
ENSG00000112282 MED23 287307 sc-eQTL 1.69e-01 0.125 0.0903 0.288 B_Intermediate L2
ENSG00000112303 VNN2 -847910 sc-eQTL 7.65e-01 0.0269 0.0898 0.288 B_Intermediate L2
ENSG00000112306 RPS12 -899020 sc-eQTL 3.70e-01 0.0493 0.0549 0.288 B_Intermediate L2
ENSG00000118507 AKAP7 780082 sc-eQTL 5.21e-01 0.0592 0.0921 0.288 B_Intermediate L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 2.49e-01 -0.114 0.0988 0.288 B_Intermediate L2
ENSG00000228495 LINC01013 -216339 sc-eQTL 3.63e-02 0.176 0.0833 0.288 B_Intermediate L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 4.97e-02 0.173 0.0877 0.284 B_Memory L2
ENSG00000079931 MOXD1 -485926 sc-eQTL 8.66e-01 0.0155 0.0918 0.284 B_Memory L2
ENSG00000079950 STX7 -597649 sc-eQTL 6.01e-01 0.0377 0.072 0.284 B_Memory L2
ENSG00000112282 MED23 287307 sc-eQTL 8.13e-01 -0.022 0.0928 0.284 B_Memory L2
ENSG00000112303 VNN2 -847910 sc-eQTL 2.77e-01 -0.102 0.094 0.284 B_Memory L2
ENSG00000112306 RPS12 -899020 sc-eQTL 6.49e-02 0.0836 0.045 0.284 B_Memory L2
ENSG00000118507 AKAP7 780082 sc-eQTL 9.19e-01 0.00981 0.0966 0.284 B_Memory L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 2.96e-01 -0.0991 0.0945 0.284 B_Memory L2
ENSG00000228495 LINC01013 -216339 sc-eQTL 9.08e-03 0.229 0.0869 0.284 B_Memory L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 6.47e-01 -0.0344 0.0751 0.286 B_Naive1 L2
ENSG00000079931 MOXD1 -485926 sc-eQTL 9.38e-01 -0.00798 0.102 0.286 B_Naive1 L2
ENSG00000079950 STX7 -597649 sc-eQTL 3.45e-01 0.0421 0.0445 0.286 B_Naive1 L2
ENSG00000112282 MED23 287307 sc-eQTL 3.07e-01 0.0817 0.0797 0.286 B_Naive1 L2
ENSG00000112303 VNN2 -847910 sc-eQTL 5.68e-03 0.238 0.0851 0.286 B_Naive1 L2
ENSG00000112306 RPS12 -899020 sc-eQTL 8.77e-01 0.00767 0.0493 0.286 B_Naive1 L2
ENSG00000118507 AKAP7 780082 sc-eQTL 6.57e-01 0.0445 0.1 0.286 B_Naive1 L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 4.56e-01 0.0711 0.0951 0.286 B_Naive1 L2
ENSG00000228495 LINC01013 -216339 sc-eQTL 3.70e-02 0.131 0.0624 0.286 B_Naive1 L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 9.42e-01 0.00615 0.0838 0.285 B_Naive2 L2
ENSG00000079931 MOXD1 -485926 sc-eQTL 4.80e-01 0.0671 0.0948 0.285 B_Naive2 L2
ENSG00000079950 STX7 -597649 sc-eQTL 5.74e-01 0.0291 0.0517 0.285 B_Naive2 L2
ENSG00000112282 MED23 287307 sc-eQTL 9.06e-01 0.0113 0.0955 0.285 B_Naive2 L2
ENSG00000112303 VNN2 -847910 sc-eQTL 9.46e-01 -0.00641 0.095 0.285 B_Naive2 L2
ENSG00000112306 RPS12 -899020 sc-eQTL 4.41e-01 -0.0388 0.0502 0.285 B_Naive2 L2
ENSG00000118507 AKAP7 780082 sc-eQTL 7.38e-01 -0.0337 0.1 0.285 B_Naive2 L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 6.93e-01 -0.0379 0.0959 0.285 B_Naive2 L2
ENSG00000228495 LINC01013 -216339 sc-eQTL 1.91e-01 0.0869 0.0662 0.285 B_Naive2 L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 3.72e-01 -0.0718 0.0802 0.277 CD4_CTL L2
ENSG00000079950 STX7 -597649 sc-eQTL 2.14e-01 0.123 0.0987 0.277 CD4_CTL L2
ENSG00000112282 MED23 287307 sc-eQTL 4.43e-01 0.079 0.103 0.277 CD4_CTL L2
ENSG00000112303 VNN2 -847910 sc-eQTL 5.28e-01 -0.063 0.0998 0.277 CD4_CTL L2
ENSG00000112306 RPS12 -899020 sc-eQTL 5.06e-01 -0.0307 0.0461 0.277 CD4_CTL L2
ENSG00000118507 AKAP7 780082 sc-eQTL 8.85e-01 -0.0143 0.0987 0.277 CD4_CTL L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 5.32e-01 0.0582 0.093 0.277 CD4_CTL L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 4.79e-01 -0.0648 0.0914 0.286 CD4_Naive L2
ENSG00000079950 STX7 -597649 sc-eQTL 8.26e-02 -0.135 0.0772 0.286 CD4_Naive L2
ENSG00000112282 MED23 287307 sc-eQTL 8.12e-01 -0.0158 0.0663 0.286 CD4_Naive L2
ENSG00000112303 VNN2 -847910 sc-eQTL 8.76e-01 0.0112 0.072 0.286 CD4_Naive L2
ENSG00000112306 RPS12 -899020 sc-eQTL 3.66e-01 -0.0422 0.0466 0.286 CD4_Naive L2
ENSG00000118507 AKAP7 780082 sc-eQTL 4.88e-01 0.0601 0.0866 0.286 CD4_Naive L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 1.09e-01 -0.144 0.0893 0.286 CD4_Naive L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 3.80e-01 -0.0826 0.0939 0.286 CD4_TCM L2
ENSG00000079950 STX7 -597649 sc-eQTL 9.71e-01 -0.00313 0.0859 0.286 CD4_TCM L2
ENSG00000112282 MED23 287307 sc-eQTL 5.43e-01 -0.044 0.0722 0.286 CD4_TCM L2
ENSG00000112303 VNN2 -847910 sc-eQTL 2.66e-01 0.0941 0.0844 0.286 CD4_TCM L2
ENSG00000112306 RPS12 -899020 sc-eQTL 8.28e-01 -0.00954 0.0439 0.286 CD4_TCM L2
ENSG00000118507 AKAP7 780082 sc-eQTL 6.35e-01 -0.0398 0.0838 0.286 CD4_TCM L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 7.73e-01 -0.0294 0.102 0.286 CD4_TCM L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 9.92e-01 0.000979 0.098 0.286 CD4_TEM L2
ENSG00000079950 STX7 -597649 sc-eQTL 1.53e-01 0.14 0.0976 0.286 CD4_TEM L2
ENSG00000112282 MED23 287307 sc-eQTL 5.66e-02 -0.172 0.0895 0.286 CD4_TEM L2
ENSG00000112303 VNN2 -847910 sc-eQTL 6.04e-01 -0.0489 0.094 0.286 CD4_TEM L2
ENSG00000112306 RPS12 -899020 sc-eQTL 8.53e-01 0.00715 0.0386 0.286 CD4_TEM L2
ENSG00000118507 AKAP7 780082 sc-eQTL 7.09e-01 0.0371 0.0992 0.286 CD4_TEM L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 1.73e-01 -0.131 0.0955 0.286 CD4_TEM L2
ENSG00000079950 STX7 -597649 sc-eQTL 8.62e-01 0.014 0.0803 0.286 CD8_CTL L2
ENSG00000112282 MED23 287307 sc-eQTL 1.51e-02 0.199 0.0811 0.286 CD8_CTL L2
ENSG00000112303 VNN2 -847910 sc-eQTL 2.75e-01 -0.0996 0.091 0.286 CD8_CTL L2
ENSG00000112306 RPS12 -899020 sc-eQTL 5.69e-01 0.0278 0.0488 0.286 CD8_CTL L2
ENSG00000118507 AKAP7 780082 sc-eQTL 2.64e-01 -0.103 0.0918 0.286 CD8_CTL L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 9.05e-01 -0.0113 0.0946 0.286 CD8_CTL L2
ENSG00000079950 STX7 -597649 sc-eQTL 7.25e-01 0.0351 0.0996 0.286 CD8_Naive L2
ENSG00000112282 MED23 287307 sc-eQTL 8.46e-01 -0.0156 0.0801 0.286 CD8_Naive L2
ENSG00000112303 VNN2 -847910 sc-eQTL 9.25e-01 0.00809 0.086 0.286 CD8_Naive L2
ENSG00000112306 RPS12 -899020 sc-eQTL 2.81e-01 0.0531 0.0491 0.286 CD8_Naive L2
ENSG00000118507 AKAP7 780082 sc-eQTL 5.90e-01 0.0487 0.0904 0.286 CD8_Naive L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 6.71e-01 -0.042 0.0987 0.286 CD8_Naive L2
ENSG00000079950 STX7 -597649 sc-eQTL 8.09e-02 -0.174 0.0991 0.285 CD8_TCM L2
ENSG00000112282 MED23 287307 sc-eQTL 3.42e-01 -0.0952 0.1 0.285 CD8_TCM L2
ENSG00000112303 VNN2 -847910 sc-eQTL 5.83e-01 0.0544 0.0991 0.285 CD8_TCM L2
ENSG00000112306 RPS12 -899020 sc-eQTL 6.06e-01 -0.025 0.0483 0.285 CD8_TCM L2
ENSG00000118507 AKAP7 780082 sc-eQTL 8.01e-01 -0.0272 0.108 0.285 CD8_TCM L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 7.33e-01 -0.0361 0.106 0.285 CD8_TCM L2
ENSG00000079950 STX7 -597649 sc-eQTL 1.60e-01 -0.147 0.104 0.288 CD8_TEM L2
ENSG00000112282 MED23 287307 sc-eQTL 8.93e-01 -0.0135 0.101 0.288 CD8_TEM L2
ENSG00000112303 VNN2 -847910 sc-eQTL 2.03e-01 0.132 0.103 0.288 CD8_TEM L2
ENSG00000112306 RPS12 -899020 sc-eQTL 8.54e-02 0.0959 0.0555 0.288 CD8_TEM L2
ENSG00000118507 AKAP7 780082 sc-eQTL 3.06e-01 0.105 0.102 0.288 CD8_TEM L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 4.59e-01 0.0784 0.106 0.288 CD8_TEM L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 4.59e-01 0.068 0.0918 0.286 MAIT L2
ENSG00000079950 STX7 -597649 sc-eQTL 7.10e-01 0.0356 0.0956 0.286 MAIT L2
ENSG00000112282 MED23 287307 sc-eQTL 1.84e-01 0.133 0.0997 0.286 MAIT L2
ENSG00000112303 VNN2 -847910 sc-eQTL 4.97e-01 -0.0662 0.0972 0.286 MAIT L2
ENSG00000112306 RPS12 -899020 sc-eQTL 8.13e-01 0.0113 0.0479 0.286 MAIT L2
ENSG00000118507 AKAP7 780082 sc-eQTL 7.53e-01 -0.0311 0.0989 0.286 MAIT L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 4.99e-01 -0.0679 0.1 0.286 MAIT L2
ENSG00000079950 STX7 -597649 sc-eQTL 4.06e-01 -0.0835 0.1 0.284 NK_CD56bright L2
ENSG00000112282 MED23 287307 sc-eQTL 8.41e-02 0.183 0.105 0.284 NK_CD56bright L2
ENSG00000112303 VNN2 -847910 sc-eQTL 3.71e-01 -0.0913 0.102 0.284 NK_CD56bright L2
ENSG00000112306 RPS12 -899020 sc-eQTL 9.40e-01 -0.00427 0.0568 0.284 NK_CD56bright L2
ENSG00000118507 AKAP7 780082 sc-eQTL 4.30e-01 0.0813 0.103 0.284 NK_CD56bright L2
ENSG00000079950 STX7 -597649 sc-eQTL 3.78e-01 -0.0691 0.0782 0.287 NK_CD56dim L2
ENSG00000112282 MED23 287307 sc-eQTL 6.88e-01 -0.0324 0.0805 0.287 NK_CD56dim L2
ENSG00000112303 VNN2 -847910 sc-eQTL 1.41e-01 -0.144 0.0975 0.287 NK_CD56dim L2
ENSG00000112306 RPS12 -899020 sc-eQTL 6.87e-01 0.0157 0.0389 0.287 NK_CD56dim L2
ENSG00000118507 AKAP7 780082 sc-eQTL 7.29e-01 0.0296 0.0855 0.287 NK_CD56dim L2
ENSG00000079950 STX7 -597649 sc-eQTL 2.48e-01 0.113 0.0979 0.281 NK_HLA L2
ENSG00000112282 MED23 287307 sc-eQTL 3.42e-01 -0.0943 0.099 0.281 NK_HLA L2
ENSG00000112303 VNN2 -847910 sc-eQTL 6.30e-01 -0.048 0.0994 0.281 NK_HLA L2
ENSG00000112306 RPS12 -899020 sc-eQTL 9.76e-01 0.00139 0.0463 0.281 NK_HLA L2
ENSG00000118507 AKAP7 780082 sc-eQTL 9.00e-01 0.0129 0.103 0.281 NK_HLA L2
ENSG00000079950 STX7 -597649 sc-eQTL 8.84e-01 0.0125 0.0852 0.287 NK_cytokine L2
ENSG00000112282 MED23 287307 sc-eQTL 1.82e-01 0.117 0.0877 0.287 NK_cytokine L2
ENSG00000112303 VNN2 -847910 sc-eQTL 9.22e-01 0.0094 0.0957 0.287 NK_cytokine L2
ENSG00000112306 RPS12 -899020 sc-eQTL 7.44e-01 0.017 0.0519 0.287 NK_cytokine L2
ENSG00000118507 AKAP7 780082 sc-eQTL 4.20e-01 0.0717 0.0888 0.287 NK_cytokine L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 7.66e-01 -0.0391 0.131 0.296 PB L2
ENSG00000079931 MOXD1 -485926 sc-eQTL 5.01e-01 0.0732 0.108 0.296 PB L2
ENSG00000079950 STX7 -597649 sc-eQTL 6.13e-01 -0.046 0.0906 0.296 PB L2
ENSG00000112282 MED23 287307 sc-eQTL 7.89e-01 -0.033 0.123 0.296 PB L2
ENSG00000112303 VNN2 -847910 sc-eQTL 2.56e-01 -0.126 0.11 0.296 PB L2
ENSG00000112306 RPS12 -899020 sc-eQTL 2.69e-02 0.138 0.0616 0.296 PB L2
ENSG00000118507 AKAP7 780082 sc-eQTL 3.70e-01 0.108 0.12 0.296 PB L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 6.81e-01 -0.0486 0.118 0.296 PB L2
ENSG00000228495 LINC01013 -216339 sc-eQTL 7.90e-01 0.0207 0.0775 0.296 PB L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 8.52e-01 -0.016 0.0856 0.278 Pro_T L2
ENSG00000079950 STX7 -597649 sc-eQTL 1.16e-01 -0.139 0.088 0.278 Pro_T L2
ENSG00000112282 MED23 287307 sc-eQTL 9.43e-02 -0.166 0.0989 0.278 Pro_T L2
ENSG00000112303 VNN2 -847910 sc-eQTL 7.30e-01 0.0329 0.0949 0.278 Pro_T L2
ENSG00000112306 RPS12 -899020 sc-eQTL 5.69e-02 -0.0682 0.0356 0.278 Pro_T L2
ENSG00000118507 AKAP7 780082 sc-eQTL 3.28e-01 0.0836 0.0852 0.278 Pro_T L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 9.26e-01 -0.00859 0.093 0.278 Pro_T L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 3.03e-01 -0.0985 0.0953 0.286 Treg L2
ENSG00000079950 STX7 -597649 sc-eQTL 4.56e-01 -0.0713 0.0955 0.286 Treg L2
ENSG00000112282 MED23 287307 sc-eQTL 6.30e-01 -0.0474 0.0982 0.286 Treg L2
ENSG00000112303 VNN2 -847910 sc-eQTL 2.93e-01 -0.0846 0.0802 0.286 Treg L2
ENSG00000112306 RPS12 -899020 sc-eQTL 5.46e-01 0.0215 0.0355 0.286 Treg L2
ENSG00000118507 AKAP7 780082 sc-eQTL 1.94e-01 -0.11 0.0844 0.286 Treg L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 9.29e-01 -0.00891 0.1 0.286 Treg L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 7.50e-01 -0.026 0.0816 0.276 cDC L2
ENSG00000079950 STX7 -597649 sc-eQTL 7.18e-01 0.0294 0.0812 0.276 cDC L2
ENSG00000093134 VNN3 -819216 sc-eQTL 4.30e-01 -0.0638 0.0806 0.276 cDC L2
ENSG00000112282 MED23 287307 sc-eQTL 7.61e-01 0.0319 0.105 0.276 cDC L2
ENSG00000112299 VNN1 -798506 sc-eQTL 7.62e-01 -0.0288 0.0949 0.276 cDC L2
ENSG00000112303 VNN2 -847910 sc-eQTL 4.40e-01 0.0715 0.0923 0.276 cDC L2
ENSG00000112306 RPS12 -899020 sc-eQTL 9.71e-01 0.00168 0.0456 0.276 cDC L2
ENSG00000118507 AKAP7 780082 sc-eQTL 2.44e-01 -0.119 0.101 0.276 cDC L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 7.24e-01 -0.032 0.0904 0.276 cDC L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 6.35e-01 -0.042 0.0883 0.286 cMono_IL1B L2
ENSG00000079950 STX7 -597649 sc-eQTL 4.44e-01 -0.0475 0.0621 0.286 cMono_IL1B L2
ENSG00000093134 VNN3 -819216 sc-eQTL 5.78e-01 -0.049 0.0878 0.286 cMono_IL1B L2
ENSG00000112282 MED23 287307 sc-eQTL 8.92e-01 0.0118 0.0868 0.286 cMono_IL1B L2
ENSG00000112299 VNN1 -798506 sc-eQTL 8.14e-02 -0.154 0.088 0.286 cMono_IL1B L2
ENSG00000112303 VNN2 -847910 sc-eQTL 1.37e-01 -0.105 0.0705 0.286 cMono_IL1B L2
ENSG00000112306 RPS12 -899020 sc-eQTL 8.99e-01 0.00498 0.0394 0.286 cMono_IL1B L2
ENSG00000118507 AKAP7 780082 sc-eQTL 9.72e-01 -0.00297 0.0845 0.286 cMono_IL1B L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 5.21e-01 0.0488 0.0758 0.286 cMono_IL1B L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 1.93e-01 -0.119 0.0914 0.286 cMono_S100A L2
ENSG00000079950 STX7 -597649 sc-eQTL 9.04e-01 -0.00809 0.0672 0.286 cMono_S100A L2
ENSG00000093134 VNN3 -819216 sc-eQTL 7.08e-01 -0.0314 0.0839 0.286 cMono_S100A L2
ENSG00000112282 MED23 287307 sc-eQTL 6.52e-01 -0.0412 0.0911 0.286 cMono_S100A L2
ENSG00000112299 VNN1 -798506 sc-eQTL 2.79e-01 -0.0986 0.0909 0.286 cMono_S100A L2
ENSG00000112303 VNN2 -847910 sc-eQTL 5.07e-02 -0.116 0.0592 0.286 cMono_S100A L2
ENSG00000112306 RPS12 -899020 sc-eQTL 6.10e-01 0.022 0.043 0.286 cMono_S100A L2
ENSG00000118507 AKAP7 780082 sc-eQTL 3.19e-01 0.0888 0.089 0.286 cMono_S100A L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 5.81e-01 -0.0439 0.0795 0.286 cMono_S100A L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 3.29e-01 -0.101 0.104 0.27 gdT L2
ENSG00000079950 STX7 -597649 sc-eQTL 8.53e-01 0.0201 0.109 0.27 gdT L2
ENSG00000112282 MED23 287307 sc-eQTL 7.40e-01 -0.0388 0.117 0.27 gdT L2
ENSG00000112303 VNN2 -847910 sc-eQTL 2.99e-01 0.125 0.12 0.27 gdT L2
ENSG00000112306 RPS12 -899020 sc-eQTL 5.59e-01 -0.0269 0.0458 0.27 gdT L2
ENSG00000118507 AKAP7 780082 sc-eQTL 6.47e-01 0.0559 0.122 0.27 gdT L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 8.53e-01 0.022 0.119 0.27 gdT L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 9.52e-01 0.00555 0.0921 0.289 intMono L2
ENSG00000079950 STX7 -597649 sc-eQTL 3.29e-01 0.0872 0.0892 0.289 intMono L2
ENSG00000093134 VNN3 -819216 sc-eQTL 9.64e-01 -0.00406 0.0902 0.289 intMono L2
ENSG00000112282 MED23 287307 sc-eQTL 3.48e-01 0.0931 0.0989 0.289 intMono L2
ENSG00000112299 VNN1 -798506 sc-eQTL 4.35e-01 -0.0697 0.0891 0.289 intMono L2
ENSG00000112303 VNN2 -847910 sc-eQTL 1.49e-02 -0.219 0.0894 0.289 intMono L2
ENSG00000112306 RPS12 -899020 sc-eQTL 9.03e-01 0.00483 0.0395 0.289 intMono L2
ENSG00000118507 AKAP7 780082 sc-eQTL 7.10e-01 -0.036 0.0967 0.289 intMono L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 6.73e-01 -0.0406 0.096 0.289 intMono L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 5.67e-01 -0.0509 0.0887 0.278 ncMono L2
ENSG00000079950 STX7 -597649 sc-eQTL 7.44e-01 0.0221 0.0676 0.278 ncMono L2
ENSG00000093134 VNN3 -819216 sc-eQTL 7.21e-01 -0.0341 0.0955 0.278 ncMono L2
ENSG00000112282 MED23 287307 sc-eQTL 4.26e-01 -0.0771 0.0966 0.278 ncMono L2
ENSG00000112299 VNN1 -798506 sc-eQTL 7.48e-01 0.0305 0.0948 0.278 ncMono L2
ENSG00000112303 VNN2 -847910 sc-eQTL 3.79e-02 -0.188 0.0901 0.278 ncMono L2
ENSG00000112306 RPS12 -899020 sc-eQTL 3.99e-02 0.0935 0.0452 0.278 ncMono L2
ENSG00000118507 AKAP7 780082 sc-eQTL 8.08e-01 0.0229 0.0938 0.278 ncMono L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 1.03e-01 0.131 0.0802 0.278 ncMono L2
ENSG00000079819 EPB41L2 852227 sc-eQTL 7.44e-01 -0.0356 0.109 0.277 pDC L2
ENSG00000079950 STX7 -597649 sc-eQTL 4.93e-01 0.0538 0.0782 0.277 pDC L2
ENSG00000093134 VNN3 -819216 sc-eQTL 7.24e-01 0.0279 0.0788 0.277 pDC L2
ENSG00000112282 MED23 287307 sc-eQTL 5.94e-01 0.0588 0.11 0.277 pDC L2
ENSG00000112299 VNN1 -798506 sc-eQTL 4.73e-01 -0.0576 0.0801 0.277 pDC L2
ENSG00000112303 VNN2 -847910 sc-eQTL 5.63e-01 0.0554 0.0954 0.277 pDC L2
ENSG00000112306 RPS12 -899020 sc-eQTL 9.53e-01 0.00389 0.0658 0.277 pDC L2
ENSG00000118507 AKAP7 780082 sc-eQTL 9.30e-01 0.0079 0.0898 0.277 pDC L2
ENSG00000146409 SLC18B1 -897790 sc-eQTL 9.27e-01 -0.00894 0.0974 0.277 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 852227 sc-eQTL 2.90e-01 0.0911 0.086 0.286 B_Memory LOneK1K
ENSG00000079931 MOXD1 -485926 sc-eQTL 3.98e-01 -0.0825 0.0975 0.286 B_Memory LOneK1K
ENSG00000079950 STX7 -597649 sc-eQTL 7.08e-01 0.0208 0.0553 0.286 B_Memory LOneK1K
ENSG00000112282 MED23 287307 sc-eQTL 3.66e-01 0.0765 0.0846 0.286 B_Memory LOneK1K
ENSG00000112303 VNN2 -847910 sc-eQTL 6.04e-01 -0.0455 0.0875 0.286 B_Memory LOneK1K
ENSG00000112306 RPS12 -899020 sc-eQTL 2.93e-01 0.0525 0.0498 0.286 B_Memory LOneK1K
ENSG00000118507 AKAP7 780082 sc-eQTL 9.56e-01 -0.00474 0.0861 0.286 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -897790 sc-eQTL 2.85e-01 -0.0979 0.0913 0.286 B_Memory LOneK1K
ENSG00000228495 LINC01013 -216339 sc-eQTL 1.10e-01 0.141 0.0878 0.286 B_Memory LOneK1K
ENSG00000079819 EPB41L2 852227 sc-eQTL 9.90e-01 0.000894 0.0711 0.286 B_Naive LOneK1K
ENSG00000079931 MOXD1 -485926 sc-eQTL 8.09e-01 0.0247 0.102 0.286 B_Naive LOneK1K
ENSG00000079950 STX7 -597649 sc-eQTL 4.53e-01 0.0315 0.0419 0.286 B_Naive LOneK1K
ENSG00000112282 MED23 287307 sc-eQTL 3.27e-01 0.0771 0.0785 0.286 B_Naive LOneK1K
ENSG00000112303 VNN2 -847910 sc-eQTL 5.51e-02 0.156 0.0807 0.286 B_Naive LOneK1K
ENSG00000112306 RPS12 -899020 sc-eQTL 7.48e-01 -0.0158 0.0492 0.286 B_Naive LOneK1K
ENSG00000118507 AKAP7 780082 sc-eQTL 9.96e-01 -0.000495 0.0991 0.286 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -897790 sc-eQTL 7.96e-01 0.0241 0.0929 0.286 B_Naive LOneK1K
ENSG00000228495 LINC01013 -216339 sc-eQTL 3.32e-02 0.125 0.0584 0.286 B_Naive LOneK1K
ENSG00000079819 EPB41L2 852227 sc-eQTL 3.23e-01 -0.0835 0.0843 0.286 CD14_Mono LOneK1K
ENSG00000079950 STX7 -597649 sc-eQTL 3.70e-01 -0.0466 0.0519 0.286 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -819216 sc-eQTL 6.65e-01 -0.0367 0.0847 0.286 CD14_Mono LOneK1K
ENSG00000112282 MED23 287307 sc-eQTL 9.72e-01 -0.0029 0.0815 0.286 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -798506 sc-eQTL 1.40e-01 -0.13 0.0879 0.286 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -847910 sc-eQTL 5.73e-02 -0.111 0.0579 0.286 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -899020 sc-eQTL 8.44e-01 0.00788 0.0401 0.286 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 780082 sc-eQTL 9.09e-01 0.00916 0.08 0.286 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -897790 sc-eQTL 9.36e-01 -0.00574 0.0713 0.286 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 852227 sc-eQTL 9.69e-01 0.00351 0.0891 0.284 CD16_Mono LOneK1K
ENSG00000079950 STX7 -597649 sc-eQTL 9.30e-01 0.00556 0.0632 0.284 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -819216 sc-eQTL 9.17e-01 0.00971 0.093 0.284 CD16_Mono LOneK1K
ENSG00000112282 MED23 287307 sc-eQTL 9.96e-01 0.000455 0.0906 0.284 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -798506 sc-eQTL 9.46e-01 -0.00626 0.0922 0.284 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -847910 sc-eQTL 2.92e-02 -0.189 0.0859 0.284 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -899020 sc-eQTL 7.31e-02 0.0659 0.0366 0.284 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 780082 sc-eQTL 8.64e-01 -0.0159 0.093 0.284 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -897790 sc-eQTL 7.21e-01 0.032 0.0895 0.284 CD16_Mono LOneK1K
ENSG00000079950 STX7 -597649 sc-eQTL 9.22e-01 0.00718 0.0731 0.287 NK_CD56dim LOneK1K
ENSG00000112282 MED23 287307 sc-eQTL 4.92e-01 0.0488 0.0709 0.287 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -847910 sc-eQTL 3.24e-01 -0.0913 0.0923 0.287 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -899020 sc-eQTL 8.71e-01 0.00616 0.0378 0.287 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 780082 sc-eQTL 4.43e-01 0.0601 0.0782 0.287 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000118523 CCN2 -35823 pQTL 0.0325 0.0481 0.0225 0.0 0.0 0.312

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000228495 \N -216366 1.24e-06 9.48e-07 2.62e-07 6.75e-07 1.09e-07 3.2e-07 1.13e-06 2.47e-07 1.08e-06 2.81e-07 1.24e-06 5.51e-07 1.63e-06 2.68e-07 4.12e-07 4.79e-07 7.7e-07 5.66e-07 3.56e-07 4.06e-07 2.29e-07 7.21e-07 7.79e-07 5.53e-07 1.94e-06 2.47e-07 4.91e-07 4.59e-07 9.32e-07 1.06e-06 4.71e-07 4.21e-08 9.79e-08 2.74e-07 3.26e-07 2.15e-07 3.64e-07 1.08e-07 1.94e-07 1.98e-08 9.99e-08 1.44e-06 6.81e-08 1.27e-08 1.96e-07 3.92e-08 1.3e-07 1.13e-08 6.03e-08