Genes within 1Mb (chr6:131586134:G:A):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 522812 sc-eQTL 9.84e-01 0.00353 0.179 0.051 B_Activated L2
ENSG00000079931 MOXD1 -815341 sc-eQTL 4.41e-01 0.157 0.203 0.051 B_Activated L2
ENSG00000079950 STX7 -927064 sc-eQTL 5.01e-02 -0.372 0.189 0.051 B_Activated L2
ENSG00000112282 MED23 -42108 sc-eQTL 9.37e-01 0.0168 0.212 0.051 B_Activated L2
ENSG00000118507 AKAP7 450667 sc-eQTL 8.56e-01 0.0382 0.211 0.051 B_Activated L2
ENSG00000228495 LINC01013 -545754 sc-eQTL 4.71e-01 0.131 0.182 0.051 B_Activated L2
ENSG00000079819 EPB41L2 522812 sc-eQTL 6.01e-01 -0.0835 0.16 0.05 CD4_CTL L2
ENSG00000079950 STX7 -927064 sc-eQTL 2.37e-01 -0.233 0.196 0.05 CD4_CTL L2
ENSG00000112282 MED23 -42108 sc-eQTL 5.25e-01 0.13 0.205 0.05 CD4_CTL L2
ENSG00000118507 AKAP7 450667 sc-eQTL 2.85e-01 0.21 0.196 0.05 CD4_CTL L2
ENSG00000079950 STX7 -927064 sc-eQTL 8.92e-01 -0.0266 0.196 0.051 NK_CD56bright L2
ENSG00000112282 MED23 -42108 sc-eQTL 8.41e-01 0.0417 0.207 0.051 NK_CD56bright L2
ENSG00000118507 AKAP7 450667 sc-eQTL 9.35e-01 -0.0163 0.201 0.051 NK_CD56bright L2
ENSG00000079950 STX7 -927064 sc-eQTL 3.08e-01 0.196 0.191 0.053 NK_HLA L2
ENSG00000112282 MED23 -42108 sc-eQTL 2.57e-01 0.22 0.193 0.053 NK_HLA L2
ENSG00000118507 AKAP7 450667 sc-eQTL 7.74e-01 -0.0577 0.201 0.053 NK_HLA L2
ENSG00000079819 EPB41L2 522812 sc-eQTL 9.98e-01 -0.000584 0.233 0.056 PB L2
ENSG00000079931 MOXD1 -815341 sc-eQTL 7.45e-01 0.0633 0.194 0.056 PB L2
ENSG00000079950 STX7 -927064 sc-eQTL 2.04e-02 -0.372 0.158 0.056 PB L2
ENSG00000112282 MED23 -42108 sc-eQTL 9.31e-01 0.019 0.22 0.056 PB L2
ENSG00000118507 AKAP7 450667 sc-eQTL 9.53e-01 -0.0125 0.214 0.056 PB L2
ENSG00000228495 LINC01013 -545754 sc-eQTL 1.62e-01 0.193 0.137 0.056 PB L2
ENSG00000079819 EPB41L2 522812 sc-eQTL 3.52e-01 0.163 0.175 0.05 Pro_T L2
ENSG00000079950 STX7 -927064 sc-eQTL 4.80e-01 -0.128 0.181 0.05 Pro_T L2
ENSG00000112282 MED23 -42108 sc-eQTL 6.24e-01 0.1 0.204 0.05 Pro_T L2
ENSG00000118507 AKAP7 450667 sc-eQTL 7.42e-01 -0.0578 0.175 0.05 Pro_T L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112282 MED23 -42108 eQTL 7.86e-09 -0.228 0.0391 0.0 0.0 0.0427
ENSG00000118520 ARG1 12990 pQTL 7.97e-07 -0.163 0.0328 0.0 0.0 0.0459
ENSG00000118520 ARG1 12990 eQTL 1.2e-18 -0.38 0.0422 0.0 0.0 0.0427
ENSG00000118523 CCN2 -365238 pQTL 0.00137 0.159 0.0497 0.00127 0.0 0.0459


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000112282 MED23 -42108 3.36e-05 3.08e-05 6e-06 1.5e-05 5.44e-06 1.37e-05 4.26e-05 4.35e-06 2.88e-05 1.42e-05 3.61e-05 1.61e-05 4.54e-05 1.3e-05 6.69e-06 1.7e-05 1.61e-05 2.35e-05 7.46e-06 6.54e-06 1.39e-05 2.99e-05 3.03e-05 8.53e-06 4.05e-05 7.46e-06 1.33e-05 1.18e-05 3.05e-05 2.28e-05 1.83e-05 1.64e-06 2.45e-06 6.69e-06 1.11e-05 5.45e-06 2.93e-06 3.18e-06 4.54e-06 3.24e-06 1.7e-06 3.61e-05 3.58e-06 3.6e-07 2.3e-06 3.67e-06 3.97e-06 1.53e-06 1.52e-06
ENSG00000118520 ARG1 12990 4.29e-05 3.69e-05 7.49e-06 1.84e-05 7.7e-06 1.85e-05 5.44e-05 6.56e-06 4.36e-05 2.13e-05 5.53e-05 2.36e-05 6.07e-05 1.8e-05 9.08e-06 2.71e-05 2.36e-05 3.28e-05 1.01e-05 9.02e-06 2.21e-05 4.38e-05 3.81e-05 1.18e-05 5.87e-05 1.23e-05 1.95e-05 1.73e-05 3.86e-05 3.44e-05 2.9e-05 2.63e-06 4.74e-06 8.44e-06 1.58e-05 7.85e-06 4.4e-06 4.21e-06 6.87e-06 4.03e-06 1.96e-06 4.41e-05 4.68e-06 5.27e-07 3.35e-06 5.25e-06 5.39e-06 2.59e-06 1.84e-06