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Genes within 1Mb (chr6:131488685:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 425363 sc-eQTL 4.77e-01 0.0451 0.0634 0.312 B L1
ENSG00000079931 MOXD1 -912790 sc-eQTL 2.88e-01 -0.0983 0.0923 0.312 B L1
ENSG00000112282 MED23 -139557 sc-eQTL 9.84e-03 0.179 0.0685 0.312 B L1
ENSG00000118507 AKAP7 353218 sc-eQTL 8.61e-01 -0.0144 0.0824 0.312 B L1
ENSG00000228495 LINC01013 -643203 sc-eQTL 8.94e-02 0.0929 0.0545 0.312 B L1
ENSG00000079819 EPB41L2 425363 sc-eQTL 5.72e-01 -0.047 0.083 0.312 CD4T L1
ENSG00000112282 MED23 -139557 sc-eQTL 3.32e-01 0.0522 0.0537 0.312 CD4T L1
ENSG00000118507 AKAP7 353218 sc-eQTL 2.98e-02 -0.156 0.0714 0.312 CD4T L1
ENSG00000112282 MED23 -139557 sc-eQTL 5.00e-03 0.18 0.0634 0.312 CD8T L1
ENSG00000118507 AKAP7 353218 sc-eQTL 7.69e-01 -0.0216 0.0735 0.312 CD8T L1
ENSG00000079819 EPB41L2 425363 sc-eQTL 3.29e-01 0.0671 0.0686 0.3 DC L1
ENSG00000112282 MED23 -139557 sc-eQTL 7.63e-01 -0.0266 0.0883 0.3 DC L1
ENSG00000118507 AKAP7 353218 sc-eQTL 1.07e-02 -0.22 0.0855 0.3 DC L1
ENSG00000079819 EPB41L2 425363 sc-eQTL 8.02e-01 -0.019 0.0757 0.312 Mono L1
ENSG00000112282 MED23 -139557 sc-eQTL 6.07e-01 -0.0379 0.0735 0.312 Mono L1
ENSG00000118507 AKAP7 353218 sc-eQTL 5.95e-02 -0.137 0.0724 0.312 Mono L1
ENSG00000112282 MED23 -139557 sc-eQTL 4.58e-01 -0.0465 0.0625 0.311 NK L1
ENSG00000118507 AKAP7 353218 sc-eQTL 8.47e-01 0.0144 0.0749 0.311 NK L1
ENSG00000079819 EPB41L2 425363 sc-eQTL 4.83e-01 0.0531 0.0756 0.312 Other_T L1
ENSG00000112282 MED23 -139557 sc-eQTL 6.79e-01 -0.0354 0.0855 0.312 Other_T L1
ENSG00000118507 AKAP7 353218 sc-eQTL 9.82e-02 -0.123 0.0743 0.312 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 425363 sc-eQTL 9.80e-01 0.00209 0.084 0.316 B_Activated L2
ENSG00000079931 MOXD1 -912790 sc-eQTL 7.50e-01 -0.0304 0.0953 0.316 B_Activated L2
ENSG00000112282 MED23 -139557 sc-eQTL 6.85e-02 0.18 0.0981 0.316 B_Activated L2
ENSG00000118507 AKAP7 353218 sc-eQTL 2.12e-01 -0.123 0.0983 0.316 B_Activated L2
ENSG00000228495 LINC01013 -643203 sc-eQTL 9.96e-02 0.14 0.0845 0.316 B_Activated L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 8.39e-01 -0.0177 0.0869 0.311 B_Intermediate L2
ENSG00000079931 MOXD1 -912790 sc-eQTL 1.15e-02 -0.211 0.0828 0.311 B_Intermediate L2
ENSG00000112282 MED23 -139557 sc-eQTL 1.61e-02 0.2 0.0825 0.311 B_Intermediate L2
ENSG00000118507 AKAP7 353218 sc-eQTL 5.07e-01 0.0565 0.085 0.311 B_Intermediate L2
ENSG00000228495 LINC01013 -643203 sc-eQTL 4.81e-01 -0.0547 0.0776 0.311 B_Intermediate L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 1.84e-01 0.108 0.0808 0.31 B_Memory L2
ENSG00000079931 MOXD1 -912790 sc-eQTL 9.61e-01 -0.00412 0.0842 0.31 B_Memory L2
ENSG00000112282 MED23 -139557 sc-eQTL 3.92e-01 -0.0728 0.0849 0.31 B_Memory L2
ENSG00000118507 AKAP7 353218 sc-eQTL 4.40e-02 -0.178 0.0877 0.31 B_Memory L2
ENSG00000228495 LINC01013 -643203 sc-eQTL 6.34e-01 0.0385 0.0809 0.31 B_Memory L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 8.32e-01 0.0149 0.0703 0.312 B_Naive1 L2
ENSG00000079931 MOXD1 -912790 sc-eQTL 7.20e-02 -0.172 0.0949 0.312 B_Naive1 L2
ENSG00000112282 MED23 -139557 sc-eQTL 3.64e-01 0.0679 0.0747 0.312 B_Naive1 L2
ENSG00000118507 AKAP7 353218 sc-eQTL 6.59e-01 0.0413 0.0936 0.312 B_Naive1 L2
ENSG00000228495 LINC01013 -643203 sc-eQTL 8.68e-01 0.00982 0.059 0.312 B_Naive1 L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 1.26e-01 0.122 0.0794 0.311 B_Naive2 L2
ENSG00000079931 MOXD1 -912790 sc-eQTL 9.80e-01 0.0023 0.0905 0.311 B_Naive2 L2
ENSG00000112282 MED23 -139557 sc-eQTL 1.73e-02 0.216 0.0899 0.311 B_Naive2 L2
ENSG00000118507 AKAP7 353218 sc-eQTL 8.72e-01 -0.0154 0.0957 0.311 B_Naive2 L2
ENSG00000228495 LINC01013 -643203 sc-eQTL 2.01e-01 0.0811 0.0632 0.311 B_Naive2 L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 3.35e-01 0.0721 0.0747 0.3 CD4_CTL L2
ENSG00000112282 MED23 -139557 sc-eQTL 1.06e-03 0.31 0.0934 0.3 CD4_CTL L2
ENSG00000118507 AKAP7 353218 sc-eQTL 8.23e-01 0.0206 0.092 0.3 CD4_CTL L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 5.17e-01 -0.0561 0.0864 0.312 CD4_Naive L2
ENSG00000112282 MED23 -139557 sc-eQTL 7.15e-01 0.0229 0.0627 0.312 CD4_Naive L2
ENSG00000118507 AKAP7 353218 sc-eQTL 2.61e-02 -0.181 0.081 0.312 CD4_Naive L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 8.51e-01 -0.0164 0.0874 0.312 CD4_TCM L2
ENSG00000112282 MED23 -139557 sc-eQTL 3.76e-01 0.0594 0.067 0.312 CD4_TCM L2
ENSG00000118507 AKAP7 353218 sc-eQTL 9.19e-01 -0.00797 0.0779 0.312 CD4_TCM L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 3.53e-01 -0.0844 0.0907 0.312 CD4_TEM L2
ENSG00000112282 MED23 -139557 sc-eQTL 1.77e-01 -0.113 0.0833 0.312 CD4_TEM L2
ENSG00000118507 AKAP7 353218 sc-eQTL 1.98e-01 0.118 0.0916 0.312 CD4_TEM L2
ENSG00000112282 MED23 -139557 sc-eQTL 1.59e-03 0.24 0.0749 0.312 CD8_CTL L2
ENSG00000118507 AKAP7 353218 sc-eQTL 8.32e-01 0.0182 0.0858 0.312 CD8_CTL L2
ENSG00000112282 MED23 -139557 sc-eQTL 7.73e-01 0.0213 0.0736 0.312 CD8_Naive L2
ENSG00000118507 AKAP7 353218 sc-eQTL 7.71e-01 -0.0242 0.0831 0.312 CD8_Naive L2
ENSG00000112282 MED23 -139557 sc-eQTL 7.00e-01 0.0351 0.0911 0.312 CD8_TCM L2
ENSG00000118507 AKAP7 353218 sc-eQTL 1.80e-01 0.131 0.0973 0.312 CD8_TCM L2
ENSG00000112282 MED23 -139557 sc-eQTL 2.05e-01 0.118 0.0929 0.306 CD8_TEM L2
ENSG00000118507 AKAP7 353218 sc-eQTL 9.37e-01 -0.00749 0.0949 0.306 CD8_TEM L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 5.53e-01 -0.0502 0.0845 0.305 MAIT L2
ENSG00000112282 MED23 -139557 sc-eQTL 4.98e-01 0.0625 0.092 0.305 MAIT L2
ENSG00000118507 AKAP7 353218 sc-eQTL 7.91e-03 -0.24 0.0895 0.305 MAIT L2
ENSG00000112282 MED23 -139557 sc-eQTL 7.21e-01 0.0344 0.096 0.304 NK_CD56bright L2
ENSG00000118507 AKAP7 353218 sc-eQTL 3.62e-01 0.0849 0.0929 0.304 NK_CD56bright L2
ENSG00000112282 MED23 -139557 sc-eQTL 2.74e-01 -0.0816 0.0745 0.312 NK_CD56dim L2
ENSG00000118507 AKAP7 353218 sc-eQTL 8.36e-01 0.0165 0.0793 0.312 NK_CD56dim L2
ENSG00000112282 MED23 -139557 sc-eQTL 4.66e-01 -0.0672 0.092 0.304 NK_HLA L2
ENSG00000118507 AKAP7 353218 sc-eQTL 9.07e-01 0.0111 0.0955 0.304 NK_HLA L2
ENSG00000112282 MED23 -139557 sc-eQTL 4.95e-01 -0.0566 0.0829 0.312 NK_cytokine L2
ENSG00000118507 AKAP7 353218 sc-eQTL 4.88e-01 0.0581 0.0836 0.312 NK_cytokine L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 4.01e-01 -0.0984 0.117 0.367 PB L2
ENSG00000079931 MOXD1 -912790 sc-eQTL 1.00e-01 -0.159 0.096 0.367 PB L2
ENSG00000112282 MED23 -139557 sc-eQTL 7.65e-01 -0.033 0.11 0.367 PB L2
ENSG00000118507 AKAP7 353218 sc-eQTL 6.34e-01 0.0511 0.107 0.367 PB L2
ENSG00000228495 LINC01013 -643203 sc-eQTL 1.80e-01 -0.0927 0.0688 0.367 PB L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 4.35e-01 0.0623 0.0798 0.309 Pro_T L2
ENSG00000112282 MED23 -139557 sc-eQTL 9.92e-01 -0.00093 0.0929 0.309 Pro_T L2
ENSG00000118507 AKAP7 353218 sc-eQTL 7.45e-01 -0.026 0.0796 0.309 Pro_T L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 2.12e-01 0.109 0.0872 0.312 Treg L2
ENSG00000112282 MED23 -139557 sc-eQTL 5.69e-01 -0.0514 0.09 0.312 Treg L2
ENSG00000118507 AKAP7 353218 sc-eQTL 1.50e-02 -0.188 0.0766 0.312 Treg L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 6.46e-01 0.0365 0.0793 0.3 cDC L2
ENSG00000112282 MED23 -139557 sc-eQTL 1.55e-01 0.145 0.101 0.3 cDC L2
ENSG00000118507 AKAP7 353218 sc-eQTL 9.45e-01 -0.0068 0.099 0.3 cDC L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 4.11e-01 -0.0677 0.0822 0.312 cMono_IL1B L2
ENSG00000112282 MED23 -139557 sc-eQTL 5.20e-01 -0.0521 0.0808 0.312 cMono_IL1B L2
ENSG00000118507 AKAP7 353218 sc-eQTL 4.98e-02 -0.154 0.0781 0.312 cMono_IL1B L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 5.55e-01 -0.0504 0.0852 0.312 cMono_S100A L2
ENSG00000112282 MED23 -139557 sc-eQTL 8.16e-01 0.0197 0.0846 0.312 cMono_S100A L2
ENSG00000118507 AKAP7 353218 sc-eQTL 2.78e-02 -0.181 0.0819 0.312 cMono_S100A L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 5.60e-01 0.0582 0.0996 0.276 gdT L2
ENSG00000112282 MED23 -139557 sc-eQTL 9.54e-01 0.00649 0.112 0.276 gdT L2
ENSG00000118507 AKAP7 353218 sc-eQTL 8.06e-01 0.0287 0.117 0.276 gdT L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 9.34e-01 0.00729 0.0875 0.311 intMono L2
ENSG00000112282 MED23 -139557 sc-eQTL 4.60e-01 0.0697 0.0941 0.311 intMono L2
ENSG00000118507 AKAP7 353218 sc-eQTL 3.27e-01 -0.0902 0.0917 0.311 intMono L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 3.23e-01 -0.0834 0.0842 0.301 ncMono L2
ENSG00000112282 MED23 -139557 sc-eQTL 4.92e-01 -0.0632 0.0919 0.301 ncMono L2
ENSG00000118507 AKAP7 353218 sc-eQTL 9.54e-01 -0.00514 0.0892 0.301 ncMono L2
ENSG00000079819 EPB41L2 425363 sc-eQTL 7.46e-01 0.0332 0.102 0.302 pDC L2
ENSG00000112282 MED23 -139557 sc-eQTL 1.34e-01 -0.154 0.102 0.302 pDC L2
ENSG00000118507 AKAP7 353218 sc-eQTL 1.16e-01 -0.132 0.0835 0.302 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 425363 sc-eQTL 8.59e-01 0.0139 0.0783 0.312 B_Memory LOneK1K
ENSG00000079931 MOXD1 -912790 sc-eQTL 1.97e-01 -0.114 0.0884 0.312 B_Memory LOneK1K
ENSG00000112282 MED23 -139557 sc-eQTL 4.67e-02 0.152 0.0762 0.312 B_Memory LOneK1K
ENSG00000118507 AKAP7 353218 sc-eQTL 1.57e-01 -0.11 0.0778 0.312 B_Memory LOneK1K
ENSG00000228495 LINC01013 -643203 sc-eQTL 1.08e-01 0.129 0.0797 0.312 B_Memory LOneK1K
ENSG00000079819 EPB41L2 425363 sc-eQTL 2.46e-01 0.0773 0.0665 0.312 B_Naive LOneK1K
ENSG00000079931 MOXD1 -912790 sc-eQTL 1.42e-01 -0.141 0.0953 0.312 B_Naive LOneK1K
ENSG00000112282 MED23 -139557 sc-eQTL 1.39e-02 0.181 0.0728 0.312 B_Naive LOneK1K
ENSG00000118507 AKAP7 353218 sc-eQTL 7.11e-01 0.0344 0.093 0.312 B_Naive LOneK1K
ENSG00000228495 LINC01013 -643203 sc-eQTL 2.79e-01 0.0599 0.0552 0.312 B_Naive LOneK1K
ENSG00000079819 EPB41L2 425363 sc-eQTL 2.35e-01 -0.0932 0.0784 0.312 CD14_Mono LOneK1K
ENSG00000112282 MED23 -139557 sc-eQTL 7.15e-01 -0.0277 0.0757 0.312 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 353218 sc-eQTL 4.29e-02 -0.15 0.0736 0.312 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 425363 sc-eQTL 9.72e-01 0.00296 0.0853 0.31 CD16_Mono LOneK1K
ENSG00000112282 MED23 -139557 sc-eQTL 5.15e-01 -0.0565 0.0867 0.31 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 353218 sc-eQTL 7.77e-02 -0.157 0.0884 0.31 CD16_Mono LOneK1K
ENSG00000112282 MED23 -139557 sc-eQTL 3.51e-01 -0.0623 0.0666 0.312 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 353218 sc-eQTL 8.77e-01 0.0114 0.0736 0.312 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112282 MED23 -139557 eQTL 4.1e-09 -0.102 0.0171 0.0 0.0 0.332
ENSG00000118507 AKAP7 353218 eQTL 0.0358 -0.0455 0.0216 0.0 0.0 0.332
ENSG00000118520 ARG1 -84459 pQTL 1.31e-08 -0.0827 0.0145 0.0 0.0 0.33
ENSG00000118520 ARG1 -84459 eQTL 6.42e-15 -0.148 0.0187 0.0 0.0 0.332

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000112282 MED23 -139557 2.64e-06 3.18e-06 3.61e-07 1.99e-06 6.22e-07 8.37e-07 2.25e-06 8.37e-07 2.07e-06 1.15e-06 2.57e-06 1.39e-06 3.93e-06 1.4e-06 9.33e-07 1.64e-06 1.61e-06 2.31e-06 1.42e-06 1.41e-06 1.37e-06 3.12e-06 2.61e-06 1.17e-06 4.03e-06 1.08e-06 1.39e-06 1.81e-06 2.68e-06 2.52e-06 1.96e-06 3.28e-07 5.81e-07 1.3e-06 1.65e-06 9.45e-07 8.12e-07 3.93e-07 1.18e-06 4.16e-07 1.96e-07 3.43e-06 6.27e-07 1.95e-07 2.97e-07 3.67e-07 8.19e-07 2e-07 1.56e-07
ENSG00000118520 ARG1 -84459 4.65e-06 5.11e-06 6.9e-07 3.21e-06 1.52e-06 1.57e-06 6.35e-06 1.14e-06 4.91e-06 2.69e-06 6.14e-06 3.27e-06 7.67e-06 1.76e-06 1.11e-06 3.77e-06 1.98e-06 3.82e-06 1.45e-06 1.16e-06 2.77e-06 5e-06 4.49e-06 1.55e-06 7.98e-06 1.96e-06 2.35e-06 1.64e-06 4.79e-06 5.03e-06 2.87e-06 4.38e-07 7.21e-07 1.84e-06 2.04e-06 1.17e-06 9.76e-07 4.36e-07 8.52e-07 5.82e-07 6.13e-07 5.67e-06 3.83e-07 1.53e-07 5.79e-07 1.34e-06 1.13e-06 6.9e-07 4.23e-07
ENSG00000154269 \N -139757 2.64e-06 3.09e-06 3.6e-07 1.99e-06 6.22e-07 8.37e-07 2.25e-06 8.7e-07 2.07e-06 1.13e-06 2.57e-06 1.39e-06 3.93e-06 1.4e-06 9.33e-07 1.64e-06 1.61e-06 2.31e-06 1.42e-06 1.41e-06 1.36e-06 3.12e-06 2.61e-06 1.21e-06 4.03e-06 1.13e-06 1.39e-06 1.81e-06 2.68e-06 2.45e-06 1.96e-06 3.28e-07 5.81e-07 1.3e-06 1.65e-06 9.45e-07 8.12e-07 4.09e-07 1.18e-06 4.34e-07 1.96e-07 3.4e-06 6.27e-07 1.95e-07 2.97e-07 3.67e-07 8.19e-07 1.99e-07 1.56e-07