logo

Genes within 1Mb (chr6:131484555:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 421233 sc-eQTL 5.91e-01 0.0336 0.0625 0.323 B L1
ENSG00000079931 MOXD1 -916920 sc-eQTL 4.71e-01 -0.0658 0.0912 0.323 B L1
ENSG00000112282 MED23 -143687 sc-eQTL 1.71e-02 0.163 0.0677 0.323 B L1
ENSG00000118507 AKAP7 349088 sc-eQTL 9.31e-01 0.00701 0.0812 0.323 B L1
ENSG00000228495 LINC01013 -647333 sc-eQTL 8.21e-02 0.0937 0.0537 0.323 B L1
ENSG00000079819 EPB41L2 421233 sc-eQTL 5.37e-01 -0.0509 0.0823 0.323 CD4T L1
ENSG00000112282 MED23 -143687 sc-eQTL 3.68e-01 0.048 0.0532 0.323 CD4T L1
ENSG00000118507 AKAP7 349088 sc-eQTL 3.86e-02 -0.147 0.0708 0.323 CD4T L1
ENSG00000112282 MED23 -143687 sc-eQTL 1.31e-02 0.158 0.0631 0.323 CD8T L1
ENSG00000118507 AKAP7 349088 sc-eQTL 7.65e-01 -0.0218 0.0729 0.323 CD8T L1
ENSG00000079819 EPB41L2 421233 sc-eQTL 3.68e-01 0.0614 0.0681 0.311 DC L1
ENSG00000112282 MED23 -143687 sc-eQTL 8.43e-01 -0.0174 0.0877 0.311 DC L1
ENSG00000118507 AKAP7 349088 sc-eQTL 4.79e-03 -0.241 0.0845 0.311 DC L1
ENSG00000079819 EPB41L2 421233 sc-eQTL 5.76e-01 -0.0419 0.0748 0.323 Mono L1
ENSG00000112282 MED23 -143687 sc-eQTL 7.79e-01 -0.0205 0.0727 0.323 Mono L1
ENSG00000118507 AKAP7 349088 sc-eQTL 4.35e-02 -0.145 0.0715 0.323 Mono L1
ENSG00000112282 MED23 -143687 sc-eQTL 3.11e-01 -0.063 0.062 0.322 NK L1
ENSG00000118507 AKAP7 349088 sc-eQTL 9.65e-01 -0.0033 0.0744 0.322 NK L1
ENSG00000079819 EPB41L2 421233 sc-eQTL 4.58e-01 0.0557 0.0749 0.323 Other_T L1
ENSG00000112282 MED23 -143687 sc-eQTL 4.94e-01 -0.058 0.0846 0.323 Other_T L1
ENSG00000118507 AKAP7 349088 sc-eQTL 4.86e-02 -0.146 0.0734 0.323 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 421233 sc-eQTL 9.14e-01 0.00903 0.083 0.327 B_Activated L2
ENSG00000079931 MOXD1 -916920 sc-eQTL 7.49e-01 -0.0302 0.0942 0.327 B_Activated L2
ENSG00000112282 MED23 -143687 sc-eQTL 8.57e-02 0.168 0.0971 0.327 B_Activated L2
ENSG00000118507 AKAP7 349088 sc-eQTL 2.40e-01 -0.115 0.0972 0.327 B_Activated L2
ENSG00000228495 LINC01013 -647333 sc-eQTL 1.69e-01 0.116 0.0837 0.327 B_Activated L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 7.13e-01 -0.0317 0.0859 0.322 B_Intermediate L2
ENSG00000079931 MOXD1 -916920 sc-eQTL 7.89e-03 -0.219 0.0817 0.322 B_Intermediate L2
ENSG00000112282 MED23 -143687 sc-eQTL 5.07e-02 0.161 0.082 0.322 B_Intermediate L2
ENSG00000118507 AKAP7 349088 sc-eQTL 4.60e-01 0.0621 0.084 0.322 B_Intermediate L2
ENSG00000228495 LINC01013 -647333 sc-eQTL 3.79e-01 -0.0676 0.0767 0.322 B_Intermediate L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 1.80e-01 0.108 0.0802 0.321 B_Memory L2
ENSG00000079931 MOXD1 -916920 sc-eQTL 7.53e-01 0.0263 0.0835 0.321 B_Memory L2
ENSG00000112282 MED23 -143687 sc-eQTL 4.67e-01 -0.0614 0.0843 0.321 B_Memory L2
ENSG00000118507 AKAP7 349088 sc-eQTL 6.39e-02 -0.162 0.0872 0.321 B_Memory L2
ENSG00000228495 LINC01013 -647333 sc-eQTL 6.70e-01 0.0343 0.0803 0.321 B_Memory L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 9.82e-01 0.00161 0.0696 0.323 B_Naive1 L2
ENSG00000079931 MOXD1 -916920 sc-eQTL 1.19e-01 -0.147 0.094 0.323 B_Naive1 L2
ENSG00000112282 MED23 -143687 sc-eQTL 4.60e-01 0.0547 0.0739 0.323 B_Naive1 L2
ENSG00000118507 AKAP7 349088 sc-eQTL 5.65e-01 0.0534 0.0926 0.323 B_Naive1 L2
ENSG00000228495 LINC01013 -647333 sc-eQTL 8.38e-01 0.012 0.0584 0.323 B_Naive1 L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 3.08e-01 0.0806 0.0789 0.322 B_Naive2 L2
ENSG00000079931 MOXD1 -916920 sc-eQTL 4.78e-01 0.0637 0.0896 0.322 B_Naive2 L2
ENSG00000112282 MED23 -143687 sc-eQTL 1.19e-02 0.226 0.0889 0.322 B_Naive2 L2
ENSG00000118507 AKAP7 349088 sc-eQTL 9.08e-01 0.011 0.0948 0.322 B_Naive2 L2
ENSG00000228495 LINC01013 -647333 sc-eQTL 1.82e-01 0.0837 0.0625 0.322 B_Naive2 L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 4.90e-01 0.0515 0.0744 0.311 CD4_CTL L2
ENSG00000112282 MED23 -143687 sc-eQTL 8.39e-05 0.369 0.0918 0.311 CD4_CTL L2
ENSG00000118507 AKAP7 349088 sc-eQTL 9.34e-01 -0.00754 0.0916 0.311 CD4_CTL L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 5.50e-01 -0.0513 0.0856 0.323 CD4_Naive L2
ENSG00000112282 MED23 -143687 sc-eQTL 7.55e-01 0.0194 0.0621 0.323 CD4_Naive L2
ENSG00000118507 AKAP7 349088 sc-eQTL 3.28e-02 -0.173 0.0804 0.323 CD4_Naive L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 7.19e-01 -0.0312 0.0868 0.323 CD4_TCM L2
ENSG00000112282 MED23 -143687 sc-eQTL 3.84e-01 0.0581 0.0665 0.323 CD4_TCM L2
ENSG00000118507 AKAP7 349088 sc-eQTL 7.67e-01 -0.0229 0.0773 0.323 CD4_TCM L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 2.06e-01 -0.114 0.09 0.323 CD4_TEM L2
ENSG00000112282 MED23 -143687 sc-eQTL 1.43e-01 -0.122 0.0828 0.323 CD4_TEM L2
ENSG00000118507 AKAP7 349088 sc-eQTL 1.67e-01 0.126 0.091 0.323 CD4_TEM L2
ENSG00000112282 MED23 -143687 sc-eQTL 5.48e-03 0.21 0.0749 0.323 CD8_CTL L2
ENSG00000118507 AKAP7 349088 sc-eQTL 6.64e-01 0.0371 0.0853 0.323 CD8_CTL L2
ENSG00000112282 MED23 -143687 sc-eQTL 8.64e-01 0.0125 0.073 0.323 CD8_Naive L2
ENSG00000118507 AKAP7 349088 sc-eQTL 5.94e-01 -0.044 0.0824 0.323 CD8_Naive L2
ENSG00000112282 MED23 -143687 sc-eQTL 6.93e-01 0.0357 0.0905 0.324 CD8_TCM L2
ENSG00000118507 AKAP7 349088 sc-eQTL 3.51e-01 0.0907 0.097 0.324 CD8_TCM L2
ENSG00000112282 MED23 -143687 sc-eQTL 2.26e-01 0.112 0.0924 0.317 CD8_TEM L2
ENSG00000118507 AKAP7 349088 sc-eQTL 8.58e-01 -0.0169 0.0943 0.317 CD8_TEM L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 6.48e-01 -0.0384 0.0841 0.316 MAIT L2
ENSG00000112282 MED23 -143687 sc-eQTL 6.94e-01 0.0361 0.0916 0.316 MAIT L2
ENSG00000118507 AKAP7 349088 sc-eQTL 5.69e-03 -0.248 0.0889 0.316 MAIT L2
ENSG00000112282 MED23 -143687 sc-eQTL 9.29e-01 0.00851 0.0955 0.316 NK_CD56bright L2
ENSG00000118507 AKAP7 349088 sc-eQTL 4.65e-01 0.0678 0.0925 0.316 NK_CD56bright L2
ENSG00000112282 MED23 -143687 sc-eQTL 2.09e-01 -0.0933 0.0741 0.323 NK_CD56dim L2
ENSG00000118507 AKAP7 349088 sc-eQTL 9.32e-01 -0.00679 0.0789 0.323 NK_CD56dim L2
ENSG00000112282 MED23 -143687 sc-eQTL 5.60e-01 -0.0535 0.0916 0.315 NK_HLA L2
ENSG00000118507 AKAP7 349088 sc-eQTL 9.26e-01 0.00885 0.095 0.315 NK_HLA L2
ENSG00000112282 MED23 -143687 sc-eQTL 4.56e-01 -0.0616 0.0824 0.323 NK_cytokine L2
ENSG00000118507 AKAP7 349088 sc-eQTL 5.03e-01 0.0558 0.0832 0.323 NK_cytokine L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 5.33e-01 -0.0718 0.115 0.378 PB L2
ENSG00000079931 MOXD1 -916920 sc-eQTL 7.61e-02 -0.169 0.0943 0.378 PB L2
ENSG00000112282 MED23 -143687 sc-eQTL 6.20e-01 -0.0539 0.108 0.378 PB L2
ENSG00000118507 AKAP7 349088 sc-eQTL 5.42e-01 0.0645 0.106 0.378 PB L2
ENSG00000228495 LINC01013 -647333 sc-eQTL 1.35e-01 -0.102 0.0676 0.378 PB L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 3.08e-01 0.0811 0.0794 0.32 Pro_T L2
ENSG00000112282 MED23 -143687 sc-eQTL 8.56e-01 -0.0168 0.0926 0.32 Pro_T L2
ENSG00000118507 AKAP7 349088 sc-eQTL 7.65e-01 -0.0237 0.0794 0.32 Pro_T L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 1.25e-01 0.133 0.0866 0.323 Treg L2
ENSG00000112282 MED23 -143687 sc-eQTL 5.09e-01 -0.0591 0.0895 0.323 Treg L2
ENSG00000118507 AKAP7 349088 sc-eQTL 1.46e-02 -0.188 0.0761 0.323 Treg L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 6.29e-01 0.038 0.0785 0.31 cDC L2
ENSG00000112282 MED23 -143687 sc-eQTL 1.02e-01 0.165 0.1 0.31 cDC L2
ENSG00000118507 AKAP7 349088 sc-eQTL 8.03e-01 -0.0245 0.098 0.31 cDC L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 3.52e-01 -0.0761 0.0816 0.323 cMono_IL1B L2
ENSG00000112282 MED23 -143687 sc-eQTL 7.37e-01 -0.027 0.0803 0.323 cMono_IL1B L2
ENSG00000118507 AKAP7 349088 sc-eQTL 6.57e-02 -0.144 0.0776 0.323 cMono_IL1B L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 3.00e-01 -0.0878 0.0845 0.323 cMono_S100A L2
ENSG00000112282 MED23 -143687 sc-eQTL 7.91e-01 0.0224 0.0841 0.323 cMono_S100A L2
ENSG00000118507 AKAP7 349088 sc-eQTL 2.03e-02 -0.19 0.0813 0.323 cMono_S100A L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 8.14e-01 0.0232 0.0985 0.288 gdT L2
ENSG00000112282 MED23 -143687 sc-eQTL 8.35e-01 -0.0231 0.111 0.288 gdT L2
ENSG00000118507 AKAP7 349088 sc-eQTL 8.81e-01 0.0173 0.115 0.288 gdT L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 8.73e-01 -0.0139 0.0868 0.322 intMono L2
ENSG00000112282 MED23 -143687 sc-eQTL 4.24e-01 0.0748 0.0933 0.322 intMono L2
ENSG00000118507 AKAP7 349088 sc-eQTL 3.56e-01 -0.0842 0.091 0.322 intMono L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 3.43e-01 -0.0796 0.0838 0.312 ncMono L2
ENSG00000112282 MED23 -143687 sc-eQTL 3.46e-01 -0.0862 0.0913 0.312 ncMono L2
ENSG00000118507 AKAP7 349088 sc-eQTL 8.56e-01 0.0162 0.0887 0.312 ncMono L2
ENSG00000079819 EPB41L2 421233 sc-eQTL 6.92e-01 0.0406 0.102 0.311 pDC L2
ENSG00000112282 MED23 -143687 sc-eQTL 1.21e-01 -0.16 0.103 0.311 pDC L2
ENSG00000118507 AKAP7 349088 sc-eQTL 1.09e-01 -0.135 0.0838 0.311 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 421233 sc-eQTL 8.87e-01 0.011 0.0776 0.323 B_Memory LOneK1K
ENSG00000079931 MOXD1 -916920 sc-eQTL 2.46e-01 -0.102 0.0876 0.323 B_Memory LOneK1K
ENSG00000112282 MED23 -143687 sc-eQTL 9.01e-02 0.129 0.0757 0.323 B_Memory LOneK1K
ENSG00000118507 AKAP7 349088 sc-eQTL 2.19e-01 -0.0951 0.0772 0.323 B_Memory LOneK1K
ENSG00000228495 LINC01013 -647333 sc-eQTL 1.61e-01 0.111 0.0791 0.323 B_Memory LOneK1K
ENSG00000079819 EPB41L2 421233 sc-eQTL 4.04e-01 0.0553 0.066 0.323 B_Naive LOneK1K
ENSG00000079931 MOXD1 -916920 sc-eQTL 3.33e-01 -0.0918 0.0947 0.323 B_Naive LOneK1K
ENSG00000112282 MED23 -143687 sc-eQTL 1.56e-02 0.176 0.0721 0.323 B_Naive LOneK1K
ENSG00000118507 AKAP7 349088 sc-eQTL 5.43e-01 0.0561 0.0921 0.323 B_Naive LOneK1K
ENSG00000228495 LINC01013 -647333 sc-eQTL 1.93e-01 0.0713 0.0546 0.323 B_Naive LOneK1K
ENSG00000079819 EPB41L2 421233 sc-eQTL 1.30e-01 -0.118 0.0774 0.323 CD14_Mono LOneK1K
ENSG00000112282 MED23 -143687 sc-eQTL 9.39e-01 -0.00576 0.075 0.323 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 349088 sc-eQTL 3.33e-02 -0.156 0.0728 0.323 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 421233 sc-eQTL 9.62e-01 -0.00402 0.0848 0.321 CD16_Mono LOneK1K
ENSG00000112282 MED23 -143687 sc-eQTL 4.89e-01 -0.0598 0.0861 0.321 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 349088 sc-eQTL 1.04e-01 -0.143 0.0879 0.321 CD16_Mono LOneK1K
ENSG00000112282 MED23 -143687 sc-eQTL 2.75e-01 -0.0725 0.0662 0.323 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 349088 sc-eQTL 9.03e-01 -0.00897 0.0733 0.323 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112282 MED23 -143687 eQTL 1.65e-08 -0.0972 0.0171 0.0 0.0 0.341
ENSG00000118520 ARG1 -88589 pQTL 1.39e-08 -0.0826 0.0145 0.00126 0.0 0.336
ENSG00000118520 ARG1 -88589 eQTL 1.59e-13 -0.14 0.0186 0.0 0.0 0.341

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000112282 MED23 -143687 4e-06 3.64e-06 7.65e-07 1.97e-06 1.21e-06 8.89e-07 2.4e-06 1.01e-06 3.18e-06 1.7e-06 3.5e-06 2.51e-06 5.67e-06 1.24e-06 1.25e-06 2.43e-06 1.8e-06 2.37e-06 1.38e-06 1.01e-06 2.12e-06 3.98e-06 3.45e-06 1.57e-06 4.53e-06 1.32e-06 1.84e-06 1.49e-06 3.85e-06 3.21e-06 2.01e-06 5.25e-07 7.92e-07 1.86e-06 1.79e-06 9.43e-07 9.24e-07 4.74e-07 1.06e-06 3.79e-07 6.18e-07 4.12e-06 4.81e-07 1.68e-07 4.54e-07 3.22e-07 8.4e-07 4.25e-07 3.58e-07
ENSG00000118520 ARG1 -88589 5.29e-06 5.49e-06 8.44e-07 3.4e-06 1.84e-06 1.52e-06 7.68e-06 1.29e-06 4.53e-06 3.08e-06 7.34e-06 2.99e-06 9.46e-06 2.07e-06 9.95e-07 4.51e-06 3e-06 3.86e-06 1.99e-06 2.07e-06 3.15e-06 6.55e-06 4.93e-06 2.32e-06 8.97e-06 2.41e-06 3.05e-06 1.73e-06 6.27e-06 6.59e-06 2.73e-06 5.87e-07 7.68e-07 2.77e-06 2e-06 2.04e-06 1.39e-06 9.43e-07 1.34e-06 8.66e-07 1.01e-06 7.28e-06 6.73e-07 1.33e-07 7.64e-07 9.29e-07 8.95e-07 6.58e-07 5.09e-07
ENSG00000154269 \N -143887 4e-06 3.64e-06 7.65e-07 1.97e-06 1.21e-06 8.69e-07 2.38e-06 1.01e-06 3.18e-06 1.7e-06 3.5e-06 2.52e-06 5.69e-06 1.22e-06 1.2e-06 2.43e-06 1.8e-06 2.37e-06 1.38e-06 9.7e-07 2.12e-06 3.98e-06 3.45e-06 1.57e-06 4.54e-06 1.36e-06 1.84e-06 1.49e-06 3.78e-06 3.21e-06 2.01e-06 4.91e-07 7.93e-07 1.86e-06 1.79e-06 9.43e-07 9.24e-07 4.74e-07 1.06e-06 3.79e-07 6.18e-07 4.12e-06 4.8e-07 1.68e-07 4.54e-07 3.22e-07 8.4e-07 4.25e-07 3.58e-07