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Genes within 1Mb (chr6:131472903:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 409581 sc-eQTL 2.44e-01 0.125 0.107 0.915 B L1
ENSG00000079931 MOXD1 -928572 sc-eQTL 8.90e-01 0.0217 0.156 0.915 B L1
ENSG00000112282 MED23 -155339 sc-eQTL 9.34e-02 0.197 0.117 0.915 B L1
ENSG00000118507 AKAP7 337436 sc-eQTL 6.54e-01 0.0625 0.139 0.915 B L1
ENSG00000228495 LINC01013 -658985 sc-eQTL 3.36e-01 0.0891 0.0924 0.915 B L1
ENSG00000079819 EPB41L2 409581 sc-eQTL 1.41e-01 0.199 0.135 0.915 CD4T L1
ENSG00000112282 MED23 -155339 sc-eQTL 9.44e-01 0.00623 0.0879 0.915 CD4T L1
ENSG00000118507 AKAP7 337436 sc-eQTL 5.42e-02 0.226 0.117 0.915 CD4T L1
ENSG00000112282 MED23 -155339 sc-eQTL 3.22e-01 0.107 0.107 0.915 CD8T L1
ENSG00000118507 AKAP7 337436 sc-eQTL 5.61e-02 0.233 0.122 0.915 CD8T L1
ENSG00000079819 EPB41L2 409581 sc-eQTL 8.29e-01 0.0244 0.113 0.914 DC L1
ENSG00000112282 MED23 -155339 sc-eQTL 4.80e-01 -0.102 0.145 0.914 DC L1
ENSG00000118507 AKAP7 337436 sc-eQTL 2.12e-03 0.434 0.139 0.914 DC L1
ENSG00000079819 EPB41L2 409581 sc-eQTL 2.81e-02 0.282 0.128 0.915 Mono L1
ENSG00000112282 MED23 -155339 sc-eQTL 3.73e-01 -0.112 0.125 0.915 Mono L1
ENSG00000118507 AKAP7 337436 sc-eQTL 4.08e-01 0.103 0.124 0.915 Mono L1
ENSG00000112282 MED23 -155339 sc-eQTL 6.84e-01 0.042 0.103 0.914 NK L1
ENSG00000118507 AKAP7 337436 sc-eQTL 4.46e-01 0.0941 0.123 0.914 NK L1
ENSG00000079819 EPB41L2 409581 sc-eQTL 4.00e-01 -0.107 0.127 0.915 Other_T L1
ENSG00000112282 MED23 -155339 sc-eQTL 4.27e-01 -0.115 0.144 0.915 Other_T L1
ENSG00000118507 AKAP7 337436 sc-eQTL 2.05e-02 0.291 0.124 0.915 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 409581 sc-eQTL 9.35e-01 -0.0107 0.131 0.911 B_Activated L2
ENSG00000079931 MOXD1 -928572 sc-eQTL 9.41e-01 -0.0111 0.149 0.911 B_Activated L2
ENSG00000112282 MED23 -155339 sc-eQTL 5.71e-01 0.0878 0.155 0.911 B_Activated L2
ENSG00000118507 AKAP7 337436 sc-eQTL 4.66e-01 0.113 0.154 0.911 B_Activated L2
ENSG00000228495 LINC01013 -658985 sc-eQTL 7.07e-01 0.05 0.133 0.911 B_Activated L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 1.77e-01 0.199 0.147 0.916 B_Intermediate L2
ENSG00000079931 MOXD1 -928572 sc-eQTL 3.41e-01 0.136 0.142 0.916 B_Intermediate L2
ENSG00000112282 MED23 -155339 sc-eQTL 6.71e-01 0.0604 0.142 0.916 B_Intermediate L2
ENSG00000118507 AKAP7 337436 sc-eQTL 7.63e-01 0.0436 0.144 0.916 B_Intermediate L2
ENSG00000228495 LINC01013 -658985 sc-eQTL 5.96e-02 0.248 0.131 0.916 B_Intermediate L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 9.12e-01 -0.0154 0.139 0.914 B_Memory L2
ENSG00000079931 MOXD1 -928572 sc-eQTL 4.50e-01 -0.109 0.143 0.914 B_Memory L2
ENSG00000112282 MED23 -155339 sc-eQTL 3.89e-01 -0.125 0.145 0.914 B_Memory L2
ENSG00000118507 AKAP7 337436 sc-eQTL 2.29e-01 0.182 0.151 0.914 B_Memory L2
ENSG00000228495 LINC01013 -658985 sc-eQTL 4.34e-01 -0.108 0.138 0.914 B_Memory L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 8.70e-02 0.203 0.118 0.915 B_Naive1 L2
ENSG00000079931 MOXD1 -928572 sc-eQTL 1.70e-01 0.222 0.161 0.915 B_Naive1 L2
ENSG00000112282 MED23 -155339 sc-eQTL 1.33e-01 0.19 0.126 0.915 B_Naive1 L2
ENSG00000118507 AKAP7 337436 sc-eQTL 2.83e-01 -0.17 0.158 0.915 B_Naive1 L2
ENSG00000228495 LINC01013 -658985 sc-eQTL 3.41e-01 0.0952 0.0997 0.915 B_Naive1 L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 9.92e-01 0.00143 0.134 0.914 B_Naive2 L2
ENSG00000079931 MOXD1 -928572 sc-eQTL 1.50e-01 -0.219 0.151 0.914 B_Naive2 L2
ENSG00000112282 MED23 -155339 sc-eQTL 1.44e-01 0.224 0.152 0.914 B_Naive2 L2
ENSG00000118507 AKAP7 337436 sc-eQTL 5.11e-01 0.106 0.161 0.914 B_Naive2 L2
ENSG00000228495 LINC01013 -658985 sc-eQTL 1.02e-01 0.174 0.106 0.914 B_Naive2 L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 6.53e-01 0.0557 0.124 0.918 CD4_CTL L2
ENSG00000112282 MED23 -155339 sc-eQTL 4.71e-01 -0.114 0.158 0.918 CD4_CTL L2
ENSG00000118507 AKAP7 337436 sc-eQTL 4.70e-01 0.11 0.152 0.918 CD4_CTL L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 3.95e-01 0.121 0.142 0.915 CD4_Naive L2
ENSG00000112282 MED23 -155339 sc-eQTL 7.82e-01 0.0285 0.103 0.915 CD4_Naive L2
ENSG00000118507 AKAP7 337436 sc-eQTL 5.57e-02 0.257 0.133 0.915 CD4_Naive L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 1.71e-01 0.197 0.143 0.915 CD4_TCM L2
ENSG00000112282 MED23 -155339 sc-eQTL 5.62e-01 -0.0641 0.11 0.915 CD4_TCM L2
ENSG00000118507 AKAP7 337436 sc-eQTL 2.29e-01 0.154 0.128 0.915 CD4_TCM L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 4.09e-01 0.125 0.151 0.915 CD4_TEM L2
ENSG00000112282 MED23 -155339 sc-eQTL 3.45e-02 0.294 0.138 0.915 CD4_TEM L2
ENSG00000118507 AKAP7 337436 sc-eQTL 3.96e-01 -0.13 0.153 0.915 CD4_TEM L2
ENSG00000112282 MED23 -155339 sc-eQTL 6.72e-01 0.0548 0.129 0.915 CD8_CTL L2
ENSG00000118507 AKAP7 337436 sc-eQTL 4.27e-01 0.115 0.144 0.915 CD8_CTL L2
ENSG00000112282 MED23 -155339 sc-eQTL 2.04e-01 0.156 0.122 0.915 CD8_Naive L2
ENSG00000118507 AKAP7 337436 sc-eQTL 6.25e-02 0.257 0.137 0.915 CD8_Naive L2
ENSG00000112282 MED23 -155339 sc-eQTL 6.54e-01 0.0665 0.148 0.91 CD8_TCM L2
ENSG00000118507 AKAP7 337436 sc-eQTL 3.31e-01 -0.155 0.159 0.91 CD8_TCM L2
ENSG00000112282 MED23 -155339 sc-eQTL 6.50e-01 -0.0699 0.154 0.918 CD8_TEM L2
ENSG00000118507 AKAP7 337436 sc-eQTL 7.79e-01 -0.0439 0.156 0.918 CD8_TEM L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 7.35e-01 -0.048 0.142 0.916 MAIT L2
ENSG00000112282 MED23 -155339 sc-eQTL 2.32e-01 -0.184 0.154 0.916 MAIT L2
ENSG00000118507 AKAP7 337436 sc-eQTL 7.09e-02 0.275 0.151 0.916 MAIT L2
ENSG00000112282 MED23 -155339 sc-eQTL 6.32e-01 0.0761 0.158 0.913 NK_CD56bright L2
ENSG00000118507 AKAP7 337436 sc-eQTL 8.44e-01 0.0303 0.154 0.913 NK_CD56bright L2
ENSG00000112282 MED23 -155339 sc-eQTL 8.30e-02 0.213 0.123 0.914 NK_CD56dim L2
ENSG00000118507 AKAP7 337436 sc-eQTL 7.71e-01 0.0383 0.131 0.914 NK_CD56dim L2
ENSG00000112282 MED23 -155339 sc-eQTL 4.27e-02 -0.321 0.157 0.922 NK_HLA L2
ENSG00000118507 AKAP7 337436 sc-eQTL 7.69e-01 0.0485 0.165 0.922 NK_HLA L2
ENSG00000112282 MED23 -155339 sc-eQTL 3.87e-01 -0.121 0.14 0.914 NK_cytokine L2
ENSG00000118507 AKAP7 337436 sc-eQTL 3.42e-01 0.135 0.141 0.914 NK_cytokine L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 2.33e-01 -0.211 0.176 0.904 PB L2
ENSG00000079931 MOXD1 -928572 sc-eQTL 2.13e-01 0.183 0.146 0.904 PB L2
ENSG00000112282 MED23 -155339 sc-eQTL 4.05e-01 0.139 0.166 0.904 PB L2
ENSG00000118507 AKAP7 337436 sc-eQTL 1.80e-01 0.218 0.161 0.904 PB L2
ENSG00000228495 LINC01013 -658985 sc-eQTL 5.94e-01 0.056 0.105 0.904 PB L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 8.94e-01 0.0178 0.133 0.915 Pro_T L2
ENSG00000112282 MED23 -155339 sc-eQTL 6.13e-01 0.0784 0.155 0.915 Pro_T L2
ENSG00000118507 AKAP7 337436 sc-eQTL 5.97e-01 -0.0701 0.132 0.915 Pro_T L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 5.58e-01 0.086 0.147 0.915 Treg L2
ENSG00000112282 MED23 -155339 sc-eQTL 2.77e-01 0.164 0.15 0.915 Treg L2
ENSG00000118507 AKAP7 337436 sc-eQTL 9.93e-03 0.333 0.128 0.915 Treg L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 9.55e-01 0.00729 0.13 0.915 cDC L2
ENSG00000112282 MED23 -155339 sc-eQTL 4.54e-02 -0.333 0.166 0.915 cDC L2
ENSG00000118507 AKAP7 337436 sc-eQTL 7.98e-02 0.284 0.161 0.915 cDC L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 4.89e-03 0.39 0.137 0.915 cMono_IL1B L2
ENSG00000112282 MED23 -155339 sc-eQTL 1.36e-01 -0.204 0.137 0.915 cMono_IL1B L2
ENSG00000118507 AKAP7 337436 sc-eQTL 6.84e-02 0.243 0.133 0.915 cMono_IL1B L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 2.29e-01 0.173 0.143 0.915 cMono_S100A L2
ENSG00000112282 MED23 -155339 sc-eQTL 8.07e-01 -0.0348 0.143 0.915 cMono_S100A L2
ENSG00000118507 AKAP7 337436 sc-eQTL 5.14e-01 0.0912 0.139 0.915 cMono_S100A L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 1.48e-01 -0.272 0.187 0.924 gdT L2
ENSG00000112282 MED23 -155339 sc-eQTL 3.85e-01 0.184 0.212 0.924 gdT L2
ENSG00000118507 AKAP7 337436 sc-eQTL 2.52e-02 0.492 0.217 0.924 gdT L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 6.35e-01 0.072 0.152 0.913 intMono L2
ENSG00000112282 MED23 -155339 sc-eQTL 3.97e-01 0.138 0.163 0.913 intMono L2
ENSG00000118507 AKAP7 337436 sc-eQTL 8.21e-01 0.036 0.159 0.913 intMono L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 6.94e-01 0.0572 0.145 0.919 ncMono L2
ENSG00000112282 MED23 -155339 sc-eQTL 1.56e-02 0.381 0.156 0.919 ncMono L2
ENSG00000118507 AKAP7 337436 sc-eQTL 1.54e-01 -0.219 0.153 0.919 ncMono L2
ENSG00000079819 EPB41L2 409581 sc-eQTL 5.94e-01 0.0971 0.182 0.915 pDC L2
ENSG00000112282 MED23 -155339 sc-eQTL 5.58e-01 -0.108 0.184 0.915 pDC L2
ENSG00000118507 AKAP7 337436 sc-eQTL 1.23e-01 0.231 0.149 0.915 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 409581 sc-eQTL 1.09e-01 0.214 0.133 0.915 B_Memory LOneK1K
ENSG00000079931 MOXD1 -928572 sc-eQTL 3.24e-01 0.149 0.151 0.915 B_Memory LOneK1K
ENSG00000112282 MED23 -155339 sc-eQTL 7.33e-01 -0.0447 0.131 0.915 B_Memory LOneK1K
ENSG00000118507 AKAP7 337436 sc-eQTL 1.51e-01 0.191 0.133 0.915 B_Memory LOneK1K
ENSG00000228495 LINC01013 -658985 sc-eQTL 5.38e-01 0.0843 0.137 0.915 B_Memory LOneK1K
ENSG00000079819 EPB41L2 409581 sc-eQTL 3.41e-01 0.107 0.112 0.915 B_Naive LOneK1K
ENSG00000079931 MOXD1 -928572 sc-eQTL 8.42e-01 0.0324 0.162 0.915 B_Naive LOneK1K
ENSG00000112282 MED23 -155339 sc-eQTL 5.66e-02 0.237 0.124 0.915 B_Naive LOneK1K
ENSG00000118507 AKAP7 337436 sc-eQTL 5.24e-01 -0.1 0.157 0.915 B_Naive LOneK1K
ENSG00000228495 LINC01013 -658985 sc-eQTL 1.49e-01 0.135 0.093 0.915 B_Naive LOneK1K
ENSG00000079819 EPB41L2 409581 sc-eQTL 4.77e-03 0.373 0.131 0.915 CD14_Mono LOneK1K
ENSG00000112282 MED23 -155339 sc-eQTL 5.52e-02 -0.245 0.127 0.915 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 337436 sc-eQTL 3.03e-01 0.13 0.126 0.915 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 409581 sc-eQTL 6.48e-01 0.0689 0.151 0.914 CD16_Mono LOneK1K
ENSG00000112282 MED23 -155339 sc-eQTL 2.77e-03 0.455 0.15 0.914 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 337436 sc-eQTL 6.82e-01 -0.0647 0.157 0.914 CD16_Mono LOneK1K
ENSG00000112282 MED23 -155339 sc-eQTL 9.73e-01 0.00374 0.11 0.914 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 337436 sc-eQTL 6.61e-01 0.0531 0.121 0.914 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000118507 AKAP7 337436 eQTL 0.0371 0.0757 0.0362 0.0 0.0 0.0819

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina