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Genes within 1Mb (chr6:131417374:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 354052 sc-eQTL 5.17e-01 0.0394 0.0607 0.613 B L1
ENSG00000079931 MOXD1 -984101 sc-eQTL 1.29e-01 -0.134 0.0881 0.613 B L1
ENSG00000112282 MED23 -210868 sc-eQTL 4.20e-01 -0.0538 0.0665 0.613 B L1
ENSG00000118507 AKAP7 281907 sc-eQTL 1.94e-01 -0.102 0.0786 0.613 B L1
ENSG00000228495 LINC01013 -714514 sc-eQTL 2.75e-01 -0.0572 0.0523 0.613 B L1
ENSG00000079819 EPB41L2 354052 sc-eQTL 1.92e-02 -0.185 0.0785 0.613 CD4T L1
ENSG00000112282 MED23 -210868 sc-eQTL 1.88e-01 -0.0678 0.0513 0.613 CD4T L1
ENSG00000118507 AKAP7 281907 sc-eQTL 4.39e-04 0.24 0.0671 0.613 CD4T L1
ENSG00000112282 MED23 -210868 sc-eQTL 5.50e-01 0.0374 0.0624 0.613 CD8T L1
ENSG00000118507 AKAP7 281907 sc-eQTL 2.03e-01 0.0904 0.0708 0.613 CD8T L1
ENSG00000079819 EPB41L2 354052 sc-eQTL 4.80e-01 0.0467 0.066 0.608 DC L1
ENSG00000112282 MED23 -210868 sc-eQTL 8.38e-01 0.0174 0.0849 0.608 DC L1
ENSG00000118507 AKAP7 281907 sc-eQTL 3.06e-02 0.18 0.0825 0.608 DC L1
ENSG00000079819 EPB41L2 354052 sc-eQTL 4.82e-01 0.0525 0.0745 0.613 Mono L1
ENSG00000112282 MED23 -210868 sc-eQTL 1.69e-01 -0.0995 0.0722 0.613 Mono L1
ENSG00000118507 AKAP7 281907 sc-eQTL 3.92e-01 0.0616 0.0718 0.613 Mono L1
ENSG00000112282 MED23 -210868 sc-eQTL 7.54e-01 0.0191 0.0607 0.612 NK L1
ENSG00000118507 AKAP7 281907 sc-eQTL 5.04e-01 -0.0487 0.0726 0.612 NK L1
ENSG00000079819 EPB41L2 354052 sc-eQTL 8.88e-01 -0.0103 0.0725 0.613 Other_T L1
ENSG00000112282 MED23 -210868 sc-eQTL 8.44e-01 -0.0161 0.082 0.613 Other_T L1
ENSG00000118507 AKAP7 281907 sc-eQTL 2.04e-01 0.091 0.0714 0.613 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 354052 sc-eQTL 3.51e-01 -0.0743 0.0796 0.594 B_Activated L2
ENSG00000079931 MOXD1 -984101 sc-eQTL 3.50e-01 -0.0846 0.0903 0.594 B_Activated L2
ENSG00000112282 MED23 -210868 sc-eQTL 9.17e-01 0.00982 0.0941 0.594 B_Activated L2
ENSG00000118507 AKAP7 281907 sc-eQTL 8.86e-01 0.0135 0.0938 0.594 B_Activated L2
ENSG00000228495 LINC01013 -714514 sc-eQTL 8.69e-01 -0.0133 0.0808 0.594 B_Activated L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 5.77e-01 0.0469 0.0839 0.616 B_Intermediate L2
ENSG00000079931 MOXD1 -984101 sc-eQTL 9.45e-01 0.00557 0.0813 0.616 B_Intermediate L2
ENSG00000112282 MED23 -210868 sc-eQTL 9.80e-01 0.00199 0.0809 0.616 B_Intermediate L2
ENSG00000118507 AKAP7 281907 sc-eQTL 8.25e-02 -0.142 0.0816 0.616 B_Intermediate L2
ENSG00000228495 LINC01013 -714514 sc-eQTL 2.18e-02 0.171 0.0742 0.616 B_Intermediate L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 4.65e-02 0.159 0.0793 0.616 B_Memory L2
ENSG00000079931 MOXD1 -984101 sc-eQTL 4.66e-01 -0.0605 0.0828 0.616 B_Memory L2
ENSG00000112282 MED23 -210868 sc-eQTL 1.09e-01 0.134 0.0833 0.616 B_Memory L2
ENSG00000118507 AKAP7 281907 sc-eQTL 7.34e-01 -0.0297 0.0873 0.616 B_Memory L2
ENSG00000228495 LINC01013 -714514 sc-eQTL 3.75e-01 -0.0707 0.0796 0.616 B_Memory L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 6.04e-01 -0.0356 0.0685 0.613 B_Naive1 L2
ENSG00000079931 MOXD1 -984101 sc-eQTL 8.71e-01 -0.0152 0.0931 0.613 B_Naive1 L2
ENSG00000112282 MED23 -210868 sc-eQTL 2.84e-01 0.0781 0.0727 0.613 B_Naive1 L2
ENSG00000118507 AKAP7 281907 sc-eQTL 2.00e-01 -0.117 0.0909 0.613 B_Naive1 L2
ENSG00000228495 LINC01013 -714514 sc-eQTL 4.40e-01 -0.0444 0.0575 0.613 B_Naive1 L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 7.59e-01 0.024 0.0782 0.616 B_Naive2 L2
ENSG00000079931 MOXD1 -984101 sc-eQTL 2.77e-01 -0.0964 0.0884 0.616 B_Naive2 L2
ENSG00000112282 MED23 -210868 sc-eQTL 3.97e-02 -0.183 0.0883 0.616 B_Naive2 L2
ENSG00000118507 AKAP7 281907 sc-eQTL 2.14e-01 -0.116 0.0933 0.616 B_Naive2 L2
ENSG00000228495 LINC01013 -714514 sc-eQTL 9.52e-02 -0.103 0.0616 0.616 B_Naive2 L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 2.49e-01 -0.0833 0.0721 0.609 CD4_CTL L2
ENSG00000112282 MED23 -210868 sc-eQTL 8.49e-03 -0.242 0.0911 0.609 CD4_CTL L2
ENSG00000118507 AKAP7 281907 sc-eQTL 5.17e-01 -0.0577 0.0888 0.609 CD4_CTL L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 1.70e-01 -0.113 0.0822 0.613 CD4_Naive L2
ENSG00000112282 MED23 -210868 sc-eQTL 9.55e-01 -0.00341 0.0599 0.613 CD4_Naive L2
ENSG00000118507 AKAP7 281907 sc-eQTL 1.01e-04 0.299 0.0755 0.613 CD4_Naive L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 7.38e-01 -0.0287 0.0855 0.613 CD4_TCM L2
ENSG00000112282 MED23 -210868 sc-eQTL 2.71e-01 -0.0723 0.0655 0.613 CD4_TCM L2
ENSG00000118507 AKAP7 281907 sc-eQTL 3.00e-01 0.079 0.076 0.613 CD4_TCM L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 2.66e-03 -0.264 0.0869 0.613 CD4_TEM L2
ENSG00000112282 MED23 -210868 sc-eQTL 3.01e-01 -0.0845 0.0815 0.613 CD4_TEM L2
ENSG00000118507 AKAP7 281907 sc-eQTL 6.92e-01 -0.0356 0.0898 0.613 CD4_TEM L2
ENSG00000112282 MED23 -210868 sc-eQTL 1.90e-01 -0.099 0.0753 0.613 CD8_CTL L2
ENSG00000118507 AKAP7 281907 sc-eQTL 7.99e-01 0.0216 0.0845 0.613 CD8_CTL L2
ENSG00000112282 MED23 -210868 sc-eQTL 5.77e-01 0.0397 0.0711 0.613 CD8_Naive L2
ENSG00000118507 AKAP7 281907 sc-eQTL 8.54e-02 0.138 0.0797 0.613 CD8_Naive L2
ENSG00000112282 MED23 -210868 sc-eQTL 9.86e-01 0.00159 0.0892 0.618 CD8_TCM L2
ENSG00000118507 AKAP7 281907 sc-eQTL 3.31e-01 0.093 0.0955 0.618 CD8_TCM L2
ENSG00000112282 MED23 -210868 sc-eQTL 7.69e-01 -0.026 0.0884 0.619 CD8_TEM L2
ENSG00000118507 AKAP7 281907 sc-eQTL 1.95e-01 -0.116 0.0895 0.619 CD8_TEM L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 9.05e-01 0.00961 0.0803 0.615 MAIT L2
ENSG00000112282 MED23 -210868 sc-eQTL 4.98e-01 -0.0593 0.0874 0.615 MAIT L2
ENSG00000118507 AKAP7 281907 sc-eQTL 3.29e-01 0.0844 0.0862 0.615 MAIT L2
ENSG00000112282 MED23 -210868 sc-eQTL 5.90e-01 0.0504 0.0933 0.613 NK_CD56bright L2
ENSG00000118507 AKAP7 281907 sc-eQTL 9.58e-01 -0.00472 0.0906 0.613 NK_CD56bright L2
ENSG00000112282 MED23 -210868 sc-eQTL 5.57e-01 0.0431 0.0733 0.61 NK_CD56dim L2
ENSG00000118507 AKAP7 281907 sc-eQTL 2.61e-01 -0.0874 0.0776 0.61 NK_CD56dim L2
ENSG00000112282 MED23 -210868 sc-eQTL 3.09e-01 -0.0903 0.0885 0.614 NK_HLA L2
ENSG00000118507 AKAP7 281907 sc-eQTL 5.40e-01 -0.0564 0.0919 0.614 NK_HLA L2
ENSG00000112282 MED23 -210868 sc-eQTL 4.75e-01 -0.0573 0.0801 0.61 NK_cytokine L2
ENSG00000118507 AKAP7 281907 sc-eQTL 8.23e-01 -0.0181 0.0809 0.61 NK_cytokine L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 9.66e-01 0.00458 0.106 0.581 PB L2
ENSG00000079931 MOXD1 -984101 sc-eQTL 7.94e-01 -0.0232 0.0884 0.581 PB L2
ENSG00000112282 MED23 -210868 sc-eQTL 9.63e-01 0.00466 0.1 0.581 PB L2
ENSG00000118507 AKAP7 281907 sc-eQTL 3.99e-01 0.0824 0.0974 0.581 PB L2
ENSG00000228495 LINC01013 -714514 sc-eQTL 6.26e-01 -0.0308 0.063 0.581 PB L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 3.91e-01 -0.0667 0.0776 0.613 Pro_T L2
ENSG00000112282 MED23 -210868 sc-eQTL 2.69e-01 -0.0999 0.0902 0.613 Pro_T L2
ENSG00000118507 AKAP7 281907 sc-eQTL 2.86e-01 -0.0828 0.0773 0.613 Pro_T L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 7.22e-01 -0.0307 0.0862 0.613 Treg L2
ENSG00000112282 MED23 -210868 sc-eQTL 7.93e-01 -0.0233 0.0887 0.613 Treg L2
ENSG00000118507 AKAP7 281907 sc-eQTL 3.91e-02 0.157 0.0757 0.613 Treg L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 4.61e-01 0.0558 0.0755 0.605 cDC L2
ENSG00000112282 MED23 -210868 sc-eQTL 2.30e-01 -0.117 0.0968 0.605 cDC L2
ENSG00000118507 AKAP7 281907 sc-eQTL 5.87e-01 0.0512 0.0942 0.605 cDC L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 2.72e-01 0.0886 0.0805 0.613 cMono_IL1B L2
ENSG00000112282 MED23 -210868 sc-eQTL 1.59e-01 -0.111 0.0789 0.613 cMono_IL1B L2
ENSG00000118507 AKAP7 281907 sc-eQTL 3.98e-01 0.0653 0.0771 0.613 cMono_IL1B L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 9.82e-01 0.00196 0.0846 0.613 cMono_S100A L2
ENSG00000112282 MED23 -210868 sc-eQTL 8.67e-01 0.0141 0.084 0.613 cMono_S100A L2
ENSG00000118507 AKAP7 281907 sc-eQTL 7.91e-01 0.0218 0.0822 0.613 cMono_S100A L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 9.85e-02 0.151 0.0906 0.618 gdT L2
ENSG00000112282 MED23 -210868 sc-eQTL 5.35e-02 0.198 0.101 0.618 gdT L2
ENSG00000118507 AKAP7 281907 sc-eQTL 7.31e-01 0.0369 0.107 0.618 gdT L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 3.95e-01 0.0738 0.0866 0.609 intMono L2
ENSG00000112282 MED23 -210868 sc-eQTL 2.31e-01 -0.112 0.0931 0.609 intMono L2
ENSG00000118507 AKAP7 281907 sc-eQTL 5.48e-01 -0.0548 0.0911 0.609 intMono L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 5.03e-01 0.0533 0.0794 0.611 ncMono L2
ENSG00000112282 MED23 -210868 sc-eQTL 8.70e-01 0.0142 0.0866 0.611 ncMono L2
ENSG00000118507 AKAP7 281907 sc-eQTL 8.29e-01 -0.0182 0.084 0.611 ncMono L2
ENSG00000079819 EPB41L2 354052 sc-eQTL 9.93e-01 -0.000857 0.102 0.61 pDC L2
ENSG00000112282 MED23 -210868 sc-eQTL 3.66e-01 0.0928 0.102 0.61 pDC L2
ENSG00000118507 AKAP7 281907 sc-eQTL 1.05e-01 0.135 0.083 0.61 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 354052 sc-eQTL 4.02e-01 0.0645 0.0768 0.613 B_Memory LOneK1K
ENSG00000079931 MOXD1 -984101 sc-eQTL 4.33e-01 -0.0683 0.0871 0.613 B_Memory LOneK1K
ENSG00000112282 MED23 -210868 sc-eQTL 8.41e-01 0.0152 0.0756 0.613 B_Memory LOneK1K
ENSG00000118507 AKAP7 281907 sc-eQTL 7.04e-01 -0.0292 0.0768 0.613 B_Memory LOneK1K
ENSG00000228495 LINC01013 -714514 sc-eQTL 9.92e-01 0.00083 0.0788 0.613 B_Memory LOneK1K
ENSG00000079819 EPB41L2 354052 sc-eQTL 5.99e-01 -0.0345 0.0655 0.613 B_Naive LOneK1K
ENSG00000079931 MOXD1 -984101 sc-eQTL 4.37e-01 -0.0731 0.0939 0.613 B_Naive LOneK1K
ENSG00000112282 MED23 -210868 sc-eQTL 3.19e-01 -0.0722 0.0723 0.613 B_Naive LOneK1K
ENSG00000118507 AKAP7 281907 sc-eQTL 1.39e-01 -0.135 0.0909 0.613 B_Naive LOneK1K
ENSG00000228495 LINC01013 -714514 sc-eQTL 1.67e-01 -0.075 0.0541 0.613 B_Naive LOneK1K
ENSG00000079819 EPB41L2 354052 sc-eQTL 4.08e-01 0.0645 0.0778 0.613 CD14_Mono LOneK1K
ENSG00000112282 MED23 -210868 sc-eQTL 3.51e-01 -0.0701 0.0749 0.613 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 281907 sc-eQTL 4.35e-01 0.0575 0.0736 0.613 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 354052 sc-eQTL 3.72e-01 0.074 0.0828 0.61 CD16_Mono LOneK1K
ENSG00000112282 MED23 -210868 sc-eQTL 6.11e-01 -0.0429 0.0843 0.61 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 281907 sc-eQTL 6.67e-01 0.0373 0.0865 0.61 CD16_Mono LOneK1K
ENSG00000112282 MED23 -210868 sc-eQTL 8.70e-01 0.0106 0.0649 0.61 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 281907 sc-eQTL 3.35e-01 -0.069 0.0714 0.61 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112282 MED23 -210868 eQTL 0.00433 0.0479 0.0168 0.0 0.0 0.406
ENSG00000118507 AKAP7 281907 eQTL 0.0227 0.0477 0.0209 0.0 0.0 0.406
ENSG00000118520 ARG1 -155770 pQTL 9.18e-05 0.0557 0.0142 0.0 0.0 0.394
ENSG00000118520 ARG1 -155770 eQTL 3.15e-07 0.0946 0.0184 0.0 0.0 0.406

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000112282 MED23 -210868 1.94e-06 2.11e-06 2.75e-07 1.35e-06 4.93e-07 6.38e-07 1.24e-06 4.27e-07 1.71e-06 7.2e-07 1.94e-06 1.28e-06 2.68e-06 5.79e-07 4e-07 1.11e-06 1.12e-06 1.3e-06 5.56e-07 7.26e-07 6.18e-07 1.96e-06 1.64e-06 8.71e-07 2.37e-06 9.87e-07 1.05e-06 1.08e-06 1.73e-06 1.61e-06 7.57e-07 2.81e-07 3.72e-07 8e-07 8.69e-07 6.23e-07 6.89e-07 3.45e-07 5.99e-07 1.68e-07 2.29e-07 2.22e-06 3.57e-07 1.25e-07 3.38e-07 3.21e-07 3.78e-07 2.54e-07 2.82e-07
ENSG00000118520 ARG1 -155770 3.55e-06 3.15e-06 4.51e-07 1.97e-06 8e-07 7.6e-07 2.28e-06 8.5e-07 2.27e-06 1.19e-06 2.77e-06 1.66e-06 4.14e-06 1.39e-06 9.04e-07 1.95e-06 1.49e-06 2.09e-06 1.51e-06 1.23e-06 1.39e-06 3.15e-06 2.58e-06 1.56e-06 4.15e-06 1.28e-06 1.42e-06 1.79e-06 2.83e-06 2.55e-06 2.01e-06 3.98e-07 6.64e-07 1.34e-06 1.63e-06 9.67e-07 9.22e-07 3.79e-07 1.28e-06 3.46e-07 3.2e-07 3.56e-06 5.92e-07 1.96e-07 3.63e-07 3.42e-07 8.28e-07 2.47e-07 1.58e-07