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Genes within 1Mb (chr6:131409367:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 346045 sc-eQTL 2.84e-01 0.0804 0.0748 0.821 B L1
ENSG00000079931 MOXD1 -992108 sc-eQTL 8.35e-01 0.0228 0.109 0.821 B L1
ENSG00000112282 MED23 -218875 sc-eQTL 2.05e-01 -0.104 0.082 0.821 B L1
ENSG00000118507 AKAP7 273900 sc-eQTL 9.82e-01 0.00214 0.0974 0.821 B L1
ENSG00000228495 LINC01013 -722521 sc-eQTL 1.02e-01 -0.106 0.0644 0.821 B L1
ENSG00000079819 EPB41L2 346045 sc-eQTL 1.49e-01 -0.141 0.0972 0.821 CD4T L1
ENSG00000112282 MED23 -218875 sc-eQTL 5.62e-01 -0.0367 0.0632 0.821 CD4T L1
ENSG00000118507 AKAP7 273900 sc-eQTL 4.12e-01 0.0696 0.0848 0.821 CD4T L1
ENSG00000112282 MED23 -218875 sc-eQTL 4.87e-01 -0.0535 0.0767 0.821 CD8T L1
ENSG00000118507 AKAP7 273900 sc-eQTL 3.90e-01 0.0751 0.0873 0.821 CD8T L1
ENSG00000079819 EPB41L2 346045 sc-eQTL 8.42e-01 0.0163 0.0818 0.818 DC L1
ENSG00000112282 MED23 -218875 sc-eQTL 4.95e-01 -0.0718 0.105 0.818 DC L1
ENSG00000118507 AKAP7 273900 sc-eQTL 4.17e-01 0.0839 0.103 0.818 DC L1
ENSG00000079819 EPB41L2 346045 sc-eQTL 4.04e-01 -0.0746 0.0892 0.821 Mono L1
ENSG00000112282 MED23 -218875 sc-eQTL 8.75e-01 0.0137 0.0868 0.821 Mono L1
ENSG00000118507 AKAP7 273900 sc-eQTL 1.04e-01 0.14 0.0856 0.821 Mono L1
ENSG00000112282 MED23 -218875 sc-eQTL 9.81e-01 -0.00175 0.0739 0.82 NK L1
ENSG00000118507 AKAP7 273900 sc-eQTL 2.15e-01 -0.11 0.0881 0.82 NK L1
ENSG00000079819 EPB41L2 346045 sc-eQTL 7.97e-01 0.023 0.089 0.821 Other_T L1
ENSG00000112282 MED23 -218875 sc-eQTL 3.45e-01 0.095 0.1 0.821 Other_T L1
ENSG00000118507 AKAP7 273900 sc-eQTL 1.75e-01 -0.119 0.0875 0.821 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 346045 sc-eQTL 3.89e-01 0.0812 0.094 0.806 B_Activated L2
ENSG00000079931 MOXD1 -992108 sc-eQTL 7.29e-01 -0.0371 0.107 0.806 B_Activated L2
ENSG00000112282 MED23 -218875 sc-eQTL 4.60e-01 0.0822 0.111 0.806 B_Activated L2
ENSG00000118507 AKAP7 273900 sc-eQTL 1.17e-01 -0.173 0.11 0.806 B_Activated L2
ENSG00000228495 LINC01013 -722521 sc-eQTL 5.66e-01 -0.0548 0.0954 0.806 B_Activated L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 6.12e-01 0.0526 0.103 0.82 B_Intermediate L2
ENSG00000079931 MOXD1 -992108 sc-eQTL 8.93e-01 -0.0135 0.1 0.82 B_Intermediate L2
ENSG00000112282 MED23 -218875 sc-eQTL 4.40e-01 -0.077 0.0996 0.82 B_Intermediate L2
ENSG00000118507 AKAP7 273900 sc-eQTL 8.24e-01 -0.0225 0.101 0.82 B_Intermediate L2
ENSG00000228495 LINC01013 -722521 sc-eQTL 7.63e-01 0.0279 0.0925 0.82 B_Intermediate L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 4.04e-02 0.202 0.0982 0.821 B_Memory L2
ENSG00000079931 MOXD1 -992108 sc-eQTL 5.44e-01 -0.0624 0.103 0.821 B_Memory L2
ENSG00000112282 MED23 -218875 sc-eQTL 5.53e-02 0.199 0.103 0.821 B_Memory L2
ENSG00000118507 AKAP7 273900 sc-eQTL 5.55e-01 -0.0639 0.108 0.821 B_Memory L2
ENSG00000228495 LINC01013 -722521 sc-eQTL 1.97e-02 -0.229 0.0976 0.821 B_Memory L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 5.51e-01 -0.0504 0.0844 0.821 B_Naive1 L2
ENSG00000079931 MOXD1 -992108 sc-eQTL 9.67e-01 -0.00469 0.115 0.821 B_Naive1 L2
ENSG00000112282 MED23 -218875 sc-eQTL 1.54e-01 -0.128 0.0894 0.821 B_Naive1 L2
ENSG00000118507 AKAP7 273900 sc-eQTL 8.85e-01 0.0163 0.112 0.821 B_Naive1 L2
ENSG00000228495 LINC01013 -722521 sc-eQTL 1.93e-01 -0.0921 0.0706 0.821 B_Naive1 L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 6.95e-01 0.0377 0.096 0.822 B_Naive2 L2
ENSG00000079931 MOXD1 -992108 sc-eQTL 9.52e-01 0.00654 0.109 0.822 B_Naive2 L2
ENSG00000112282 MED23 -218875 sc-eQTL 4.72e-01 -0.0787 0.109 0.822 B_Naive2 L2
ENSG00000118507 AKAP7 273900 sc-eQTL 3.11e-01 -0.117 0.115 0.822 B_Naive2 L2
ENSG00000228495 LINC01013 -722521 sc-eQTL 1.17e-01 -0.119 0.0757 0.822 B_Naive2 L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 1.96e-01 -0.115 0.0882 0.818 CD4_CTL L2
ENSG00000112282 MED23 -218875 sc-eQTL 4.94e-02 -0.222 0.112 0.818 CD4_CTL L2
ENSG00000118507 AKAP7 273900 sc-eQTL 7.67e-01 0.0323 0.109 0.818 CD4_CTL L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 6.65e-01 -0.0441 0.102 0.821 CD4_Naive L2
ENSG00000112282 MED23 -218875 sc-eQTL 7.62e-01 0.0224 0.0736 0.821 CD4_Naive L2
ENSG00000118507 AKAP7 273900 sc-eQTL 4.86e-01 0.0671 0.0962 0.821 CD4_Naive L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 8.31e-01 -0.022 0.103 0.821 CD4_TCM L2
ENSG00000112282 MED23 -218875 sc-eQTL 1.83e-01 -0.105 0.0786 0.821 CD4_TCM L2
ENSG00000118507 AKAP7 273900 sc-eQTL 9.76e-01 -0.00271 0.0916 0.821 CD4_TCM L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 1.05e-01 -0.175 0.108 0.821 CD4_TEM L2
ENSG00000112282 MED23 -218875 sc-eQTL 8.39e-01 0.0202 0.0997 0.821 CD4_TEM L2
ENSG00000118507 AKAP7 273900 sc-eQTL 4.61e-01 0.0809 0.109 0.821 CD4_TEM L2
ENSG00000112282 MED23 -218875 sc-eQTL 4.57e-02 -0.185 0.0918 0.821 CD8_CTL L2
ENSG00000118507 AKAP7 273900 sc-eQTL 9.27e-01 0.0095 0.104 0.821 CD8_CTL L2
ENSG00000112282 MED23 -218875 sc-eQTL 7.58e-01 -0.0274 0.0886 0.821 CD8_Naive L2
ENSG00000118507 AKAP7 273900 sc-eQTL 8.56e-01 0.0182 0.1 0.821 CD8_Naive L2
ENSG00000112282 MED23 -218875 sc-eQTL 8.78e-01 0.0172 0.112 0.824 CD8_TCM L2
ENSG00000118507 AKAP7 273900 sc-eQTL 1.97e-01 0.155 0.119 0.824 CD8_TCM L2
ENSG00000112282 MED23 -218875 sc-eQTL 1.00e+00 2.47e-05 0.109 0.829 CD8_TEM L2
ENSG00000118507 AKAP7 273900 sc-eQTL 6.13e-01 -0.056 0.11 0.829 CD8_TEM L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 5.38e-01 0.0615 0.0997 0.825 MAIT L2
ENSG00000112282 MED23 -218875 sc-eQTL 2.05e-01 0.138 0.108 0.825 MAIT L2
ENSG00000118507 AKAP7 273900 sc-eQTL 9.85e-02 -0.177 0.107 0.825 MAIT L2
ENSG00000112282 MED23 -218875 sc-eQTL 3.81e-01 -0.101 0.115 0.824 NK_CD56bright L2
ENSG00000118507 AKAP7 273900 sc-eQTL 3.82e-01 -0.0978 0.112 0.824 NK_CD56bright L2
ENSG00000112282 MED23 -218875 sc-eQTL 9.48e-01 0.0059 0.0898 0.819 NK_CD56dim L2
ENSG00000118507 AKAP7 273900 sc-eQTL 3.08e-01 -0.0973 0.0951 0.819 NK_CD56dim L2
ENSG00000112282 MED23 -218875 sc-eQTL 9.00e-01 0.0137 0.108 0.817 NK_HLA L2
ENSG00000118507 AKAP7 273900 sc-eQTL 3.07e-01 -0.114 0.112 0.817 NK_HLA L2
ENSG00000112282 MED23 -218875 sc-eQTL 8.90e-01 -0.0135 0.098 0.819 NK_cytokine L2
ENSG00000118507 AKAP7 273900 sc-eQTL 6.13e-01 -0.0501 0.0989 0.819 NK_cytokine L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 6.73e-01 0.0537 0.127 0.785 PB L2
ENSG00000079931 MOXD1 -992108 sc-eQTL 8.21e-01 0.0239 0.106 0.785 PB L2
ENSG00000112282 MED23 -218875 sc-eQTL 3.74e-01 0.107 0.12 0.785 PB L2
ENSG00000118507 AKAP7 273900 sc-eQTL 7.78e-01 -0.0331 0.117 0.785 PB L2
ENSG00000228495 LINC01013 -722521 sc-eQTL 6.44e-01 -0.0349 0.0754 0.785 PB L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 3.60e-01 -0.0881 0.0961 0.822 Pro_T L2
ENSG00000112282 MED23 -218875 sc-eQTL 2.27e-01 -0.135 0.112 0.822 Pro_T L2
ENSG00000118507 AKAP7 273900 sc-eQTL 2.83e-01 -0.103 0.0958 0.822 Pro_T L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 6.71e-01 0.0447 0.105 0.821 Treg L2
ENSG00000112282 MED23 -218875 sc-eQTL 9.19e-01 0.011 0.108 0.821 Treg L2
ENSG00000118507 AKAP7 273900 sc-eQTL 5.74e-01 -0.0524 0.0931 0.821 Treg L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 9.66e-01 0.00399 0.0932 0.817 cDC L2
ENSG00000112282 MED23 -218875 sc-eQTL 9.88e-02 -0.197 0.119 0.817 cDC L2
ENSG00000118507 AKAP7 273900 sc-eQTL 9.51e-01 0.00716 0.116 0.817 cDC L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 9.99e-01 -0.000159 0.0989 0.821 cMono_IL1B L2
ENSG00000112282 MED23 -218875 sc-eQTL 4.42e-01 -0.0747 0.097 0.821 cMono_IL1B L2
ENSG00000118507 AKAP7 273900 sc-eQTL 1.15e-01 0.149 0.094 0.821 cMono_IL1B L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 7.63e-01 -0.0312 0.103 0.821 cMono_S100A L2
ENSG00000112282 MED23 -218875 sc-eQTL 5.89e-01 0.0555 0.103 0.821 cMono_S100A L2
ENSG00000118507 AKAP7 273900 sc-eQTL 3.82e-01 0.0879 0.1 0.821 cMono_S100A L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 8.51e-01 0.0221 0.118 0.827 gdT L2
ENSG00000112282 MED23 -218875 sc-eQTL 9.74e-01 0.00425 0.132 0.827 gdT L2
ENSG00000118507 AKAP7 273900 sc-eQTL 2.35e-01 -0.164 0.137 0.827 gdT L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 9.48e-01 -0.00672 0.103 0.818 intMono L2
ENSG00000112282 MED23 -218875 sc-eQTL 9.04e-01 -0.0134 0.111 0.818 intMono L2
ENSG00000118507 AKAP7 273900 sc-eQTL 9.93e-01 -0.00092 0.109 0.818 intMono L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 8.83e-01 -0.0144 0.0978 0.817 ncMono L2
ENSG00000112282 MED23 -218875 sc-eQTL 2.66e-01 0.119 0.106 0.817 ncMono L2
ENSG00000118507 AKAP7 273900 sc-eQTL 2.74e-01 0.113 0.103 0.817 ncMono L2
ENSG00000079819 EPB41L2 346045 sc-eQTL 9.95e-01 -0.000839 0.124 0.816 pDC L2
ENSG00000112282 MED23 -218875 sc-eQTL 4.15e-01 0.102 0.125 0.816 pDC L2
ENSG00000118507 AKAP7 273900 sc-eQTL 8.87e-02 0.174 0.102 0.816 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 346045 sc-eQTL 1.10e-01 0.151 0.0939 0.821 B_Memory LOneK1K
ENSG00000079931 MOXD1 -992108 sc-eQTL 7.31e-01 -0.0368 0.107 0.821 B_Memory LOneK1K
ENSG00000112282 MED23 -218875 sc-eQTL 3.80e-01 0.0815 0.0926 0.821 B_Memory LOneK1K
ENSG00000118507 AKAP7 273900 sc-eQTL 9.08e-01 -0.0109 0.0943 0.821 B_Memory LOneK1K
ENSG00000228495 LINC01013 -722521 sc-eQTL 4.28e-02 -0.195 0.0958 0.821 B_Memory LOneK1K
ENSG00000079819 EPB41L2 346045 sc-eQTL 6.82e-01 -0.033 0.0804 0.821 B_Naive LOneK1K
ENSG00000079931 MOXD1 -992108 sc-eQTL 9.42e-01 0.00841 0.115 0.821 B_Naive LOneK1K
ENSG00000112282 MED23 -218875 sc-eQTL 2.66e-02 -0.196 0.088 0.821 B_Naive LOneK1K
ENSG00000118507 AKAP7 273900 sc-eQTL 9.21e-01 -0.0112 0.112 0.821 B_Naive LOneK1K
ENSG00000228495 LINC01013 -722521 sc-eQTL 1.58e-01 -0.0941 0.0664 0.821 B_Naive LOneK1K
ENSG00000079819 EPB41L2 346045 sc-eQTL 8.82e-01 -0.0141 0.0951 0.821 CD14_Mono LOneK1K
ENSG00000112282 MED23 -218875 sc-eQTL 9.74e-01 0.00299 0.0916 0.821 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 273900 sc-eQTL 1.08e-01 0.144 0.0894 0.821 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 346045 sc-eQTL 7.34e-01 -0.0336 0.0986 0.819 CD16_Mono LOneK1K
ENSG00000112282 MED23 -218875 sc-eQTL 5.12e-01 0.0659 0.1 0.819 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 273900 sc-eQTL 3.95e-01 0.0877 0.103 0.819 CD16_Mono LOneK1K
ENSG00000112282 MED23 -218875 sc-eQTL 6.73e-01 0.0332 0.0787 0.819 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 273900 sc-eQTL 2.90e-01 -0.0918 0.0866 0.819 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112282 MED23 -218875 eQTL 5.13e-05 0.082 0.0202 0.0 0.0 0.195
ENSG00000118507 AKAP7 273900 eQTL 0.00354 0.0737 0.0252 0.0 0.0 0.195
ENSG00000118520 ARG1 -163777 pQTL 3.49e-05 0.0718 0.0173 0.0 0.0 0.191
ENSG00000118520 ARG1 -163777 eQTL 1.79e-10 0.142 0.022 0.0 0.0 0.195

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000112282 MED23 -218875 1.87e-06 2.09e-06 2.62e-07 1.42e-06 4.67e-07 7.17e-07 1.33e-06 6.11e-07 1.68e-06 7.42e-07 2.02e-06 1.43e-06 3.27e-06 8.9e-07 5.46e-07 1.31e-06 1.05e-06 1.72e-06 6.56e-07 1.15e-06 8.12e-07 2.26e-06 1.81e-06 9.59e-07 2.68e-06 1.2e-06 1.22e-06 1.39e-06 1.87e-06 1.63e-06 1.06e-06 2.65e-07 4.53e-07 1.27e-06 8.59e-07 8.66e-07 7.24e-07 3.84e-07 9.39e-07 3.74e-07 2.4e-07 2.9e-06 4.24e-07 2.07e-07 2.99e-07 2.98e-07 4.97e-07 2.7e-07 1.98e-07
ENSG00000118520 ARG1 -163777 3.58e-06 3.09e-06 5.59e-07 1.97e-06 1.08e-06 8.37e-07 2.51e-06 9.79e-07 2.68e-06 1.4e-06 3.14e-06 1.84e-06 5.39e-06 1.44e-06 1e-06 2.11e-06 1.59e-06 2.07e-06 1.47e-06 9.73e-07 1.81e-06 3.54e-06 3.36e-06 1.8e-06 4.31e-06 1.24e-06 1.75e-06 1.5e-06 3.88e-06 2.87e-06 1.94e-06 5.07e-07 8.14e-07 1.77e-06 1.62e-06 9.24e-07 9.38e-07 4.49e-07 1.32e-06 3.45e-07 6.06e-07 3.78e-06 6.49e-07 1.69e-07 3.75e-07 3.5e-07 8.16e-07 2.35e-07 3.21e-07
ENSG00000154269 \N -219075 1.87e-06 2.09e-06 2.62e-07 1.42e-06 4.67e-07 7.17e-07 1.33e-06 6.11e-07 1.68e-06 7.42e-07 2.02e-06 1.43e-06 3.27e-06 8.9e-07 5.75e-07 1.31e-06 1.05e-06 1.72e-06 6.68e-07 1.13e-06 8.12e-07 2.25e-06 1.81e-06 9.59e-07 2.67e-06 1.2e-06 1.22e-06 1.39e-06 1.87e-06 1.63e-06 1.06e-06 2.65e-07 4.71e-07 1.25e-06 8.59e-07 8.65e-07 7.24e-07 3.82e-07 9.37e-07 3.73e-07 2.25e-07 2.9e-06 4.24e-07 2.07e-07 2.99e-07 2.98e-07 4.95e-07 2.7e-07 2.1e-07