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Genes within 1Mb (chr6:131394113:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 330791 sc-eQTL 6.70e-01 0.0334 0.0783 0.84 B L1
ENSG00000112282 MED23 -234129 sc-eQTL 2.30e-01 -0.103 0.0857 0.84 B L1
ENSG00000118507 AKAP7 258646 sc-eQTL 8.50e-01 -0.0193 0.102 0.84 B L1
ENSG00000228495 LINC01013 -737775 sc-eQTL 1.23e-02 -0.169 0.0667 0.84 B L1
ENSG00000079819 EPB41L2 330791 sc-eQTL 4.46e-01 -0.0783 0.102 0.84 CD4T L1
ENSG00000112282 MED23 -234129 sc-eQTL 2.46e-01 -0.077 0.0663 0.84 CD4T L1
ENSG00000118507 AKAP7 258646 sc-eQTL 5.93e-01 0.0478 0.0891 0.84 CD4T L1
ENSG00000112282 MED23 -234129 sc-eQTL 5.89e-01 -0.0435 0.0803 0.84 CD8T L1
ENSG00000118507 AKAP7 258646 sc-eQTL 8.61e-01 0.0161 0.0915 0.84 CD8T L1
ENSG00000079819 EPB41L2 330791 sc-eQTL 8.92e-01 0.0115 0.0846 0.84 DC L1
ENSG00000112282 MED23 -234129 sc-eQTL 7.31e-01 0.0374 0.109 0.84 DC L1
ENSG00000118507 AKAP7 258646 sc-eQTL 7.27e-01 0.0374 0.107 0.84 DC L1
ENSG00000079819 EPB41L2 330791 sc-eQTL 6.74e-01 -0.039 0.0925 0.84 Mono L1
ENSG00000112282 MED23 -234129 sc-eQTL 9.11e-01 0.0101 0.0899 0.84 Mono L1
ENSG00000118507 AKAP7 258646 sc-eQTL 1.98e-01 0.115 0.0889 0.84 Mono L1
ENSG00000112282 MED23 -234129 sc-eQTL 7.99e-01 0.0197 0.0772 0.839 NK L1
ENSG00000118507 AKAP7 258646 sc-eQTL 1.90e-01 -0.121 0.092 0.839 NK L1
ENSG00000079819 EPB41L2 330791 sc-eQTL 3.52e-01 0.0864 0.0926 0.84 Other_T L1
ENSG00000112282 MED23 -234129 sc-eQTL 3.65e-01 0.0949 0.105 0.84 Other_T L1
ENSG00000118507 AKAP7 258646 sc-eQTL 1.48e-02 -0.222 0.0903 0.84 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 330791 sc-eQTL 5.87e-01 0.0549 0.101 0.834 B_Activated L2
ENSG00000112282 MED23 -234129 sc-eQTL 4.01e-01 0.1 0.119 0.834 B_Activated L2
ENSG00000118507 AKAP7 258646 sc-eQTL 3.96e-01 -0.101 0.118 0.834 B_Activated L2
ENSG00000228495 LINC01013 -737775 sc-eQTL 4.34e-01 -0.08 0.102 0.834 B_Activated L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 5.64e-01 0.0621 0.107 0.839 B_Intermediate L2
ENSG00000112282 MED23 -234129 sc-eQTL 8.91e-01 0.0142 0.103 0.839 B_Intermediate L2
ENSG00000118507 AKAP7 258646 sc-eQTL 6.99e-01 -0.0407 0.105 0.839 B_Intermediate L2
ENSG00000228495 LINC01013 -737775 sc-eQTL 6.52e-01 -0.0433 0.096 0.839 B_Intermediate L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 1.04e-01 0.164 0.1 0.841 B_Memory L2
ENSG00000112282 MED23 -234129 sc-eQTL 1.99e-01 0.136 0.105 0.841 B_Memory L2
ENSG00000118507 AKAP7 258646 sc-eQTL 6.83e-01 0.0449 0.11 0.841 B_Memory L2
ENSG00000228495 LINC01013 -737775 sc-eQTL 3.29e-01 -0.0979 0.1 0.841 B_Memory L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 1.35e-01 -0.132 0.088 0.84 B_Naive1 L2
ENSG00000112282 MED23 -234129 sc-eQTL 2.45e-01 -0.11 0.0938 0.84 B_Naive1 L2
ENSG00000118507 AKAP7 258646 sc-eQTL 8.25e-01 -0.0261 0.118 0.84 B_Naive1 L2
ENSG00000228495 LINC01013 -737775 sc-eQTL 2.00e-02 -0.172 0.0733 0.84 B_Naive1 L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 8.61e-01 0.0173 0.0992 0.841 B_Naive2 L2
ENSG00000112282 MED23 -234129 sc-eQTL 2.30e-01 -0.136 0.113 0.841 B_Naive2 L2
ENSG00000118507 AKAP7 258646 sc-eQTL 6.30e-01 -0.0573 0.119 0.841 B_Naive2 L2
ENSG00000228495 LINC01013 -737775 sc-eQTL 6.33e-02 -0.146 0.0781 0.841 B_Naive2 L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 2.00e-01 -0.116 0.0905 0.836 CD4_CTL L2
ENSG00000112282 MED23 -234129 sc-eQTL 4.13e-02 -0.237 0.115 0.836 CD4_CTL L2
ENSG00000118507 AKAP7 258646 sc-eQTL 8.03e-01 -0.0279 0.112 0.836 CD4_CTL L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 7.83e-01 0.0291 0.106 0.84 CD4_Naive L2
ENSG00000112282 MED23 -234129 sc-eQTL 7.40e-01 -0.0255 0.0767 0.84 CD4_Naive L2
ENSG00000118507 AKAP7 258646 sc-eQTL 3.59e-01 0.0921 0.1 0.84 CD4_Naive L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 6.52e-01 -0.0483 0.107 0.84 CD4_TCM L2
ENSG00000112282 MED23 -234129 sc-eQTL 8.63e-02 -0.141 0.0816 0.84 CD4_TCM L2
ENSG00000118507 AKAP7 258646 sc-eQTL 7.42e-01 -0.0314 0.0954 0.84 CD4_TCM L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 2.24e-01 -0.138 0.113 0.84 CD4_TEM L2
ENSG00000112282 MED23 -234129 sc-eQTL 8.18e-01 0.024 0.104 0.84 CD4_TEM L2
ENSG00000118507 AKAP7 258646 sc-eQTL 5.81e-01 -0.0633 0.115 0.84 CD4_TEM L2
ENSG00000112282 MED23 -234129 sc-eQTL 3.05e-01 -0.0989 0.0962 0.84 CD8_CTL L2
ENSG00000118507 AKAP7 258646 sc-eQTL 6.05e-01 -0.0558 0.108 0.84 CD8_CTL L2
ENSG00000112282 MED23 -234129 sc-eQTL 8.75e-01 0.0145 0.0918 0.84 CD8_Naive L2
ENSG00000118507 AKAP7 258646 sc-eQTL 5.08e-01 -0.0687 0.104 0.84 CD8_Naive L2
ENSG00000112282 MED23 -234129 sc-eQTL 5.07e-01 -0.0773 0.116 0.845 CD8_TCM L2
ENSG00000118507 AKAP7 258646 sc-eQTL 1.86e-01 0.165 0.124 0.845 CD8_TCM L2
ENSG00000112282 MED23 -234129 sc-eQTL 8.42e-01 0.0227 0.114 0.847 CD8_TEM L2
ENSG00000118507 AKAP7 258646 sc-eQTL 8.64e-01 -0.0199 0.116 0.847 CD8_TEM L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 4.04e-02 0.21 0.102 0.844 MAIT L2
ENSG00000112282 MED23 -234129 sc-eQTL 9.02e-02 0.189 0.111 0.844 MAIT L2
ENSG00000118507 AKAP7 258646 sc-eQTL 1.69e-02 -0.263 0.109 0.844 MAIT L2
ENSG00000112282 MED23 -234129 sc-eQTL 7.45e-01 -0.0385 0.118 0.842 NK_CD56bright L2
ENSG00000118507 AKAP7 258646 sc-eQTL 4.45e-01 -0.0877 0.115 0.842 NK_CD56bright L2
ENSG00000112282 MED23 -234129 sc-eQTL 7.62e-01 0.0281 0.0928 0.838 NK_CD56dim L2
ENSG00000118507 AKAP7 258646 sc-eQTL 9.30e-02 -0.165 0.0979 0.838 NK_CD56dim L2
ENSG00000112282 MED23 -234129 sc-eQTL 9.05e-01 0.0133 0.111 0.836 NK_HLA L2
ENSG00000118507 AKAP7 258646 sc-eQTL 4.39e-01 -0.089 0.115 0.836 NK_HLA L2
ENSG00000112282 MED23 -234129 sc-eQTL 9.99e-01 0.000182 0.1 0.838 NK_cytokine L2
ENSG00000118507 AKAP7 258646 sc-eQTL 5.65e-01 -0.0583 0.101 0.838 NK_cytokine L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 8.03e-01 -0.0331 0.133 0.811 PB L2
ENSG00000112282 MED23 -234129 sc-eQTL 4.24e-01 0.1 0.125 0.811 PB L2
ENSG00000118507 AKAP7 258646 sc-eQTL 9.58e-01 0.00635 0.122 0.811 PB L2
ENSG00000228495 LINC01013 -737775 sc-eQTL 4.75e-01 0.0562 0.0784 0.811 PB L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 1.21e-01 -0.155 0.0997 0.841 Pro_T L2
ENSG00000112282 MED23 -234129 sc-eQTL 5.55e-01 -0.0689 0.117 0.841 Pro_T L2
ENSG00000118507 AKAP7 258646 sc-eQTL 1.14e-01 -0.158 0.0994 0.841 Pro_T L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 8.94e-01 0.0146 0.109 0.84 Treg L2
ENSG00000112282 MED23 -234129 sc-eQTL 6.13e-01 0.057 0.112 0.84 Treg L2
ENSG00000118507 AKAP7 258646 sc-eQTL 2.58e-01 -0.11 0.0967 0.84 Treg L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 7.61e-01 -0.0295 0.0971 0.841 cDC L2
ENSG00000112282 MED23 -234129 sc-eQTL 1.47e-01 -0.181 0.124 0.841 cDC L2
ENSG00000118507 AKAP7 258646 sc-eQTL 5.31e-01 -0.0759 0.121 0.841 cDC L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 9.45e-01 0.00701 0.101 0.84 cMono_IL1B L2
ENSG00000112282 MED23 -234129 sc-eQTL 6.16e-01 -0.05 0.0996 0.84 cMono_IL1B L2
ENSG00000118507 AKAP7 258646 sc-eQTL 3.67e-01 0.0876 0.0969 0.84 cMono_IL1B L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 4.74e-01 0.076 0.106 0.84 cMono_S100A L2
ENSG00000112282 MED23 -234129 sc-eQTL 4.15e-01 0.0858 0.105 0.84 cMono_S100A L2
ENSG00000118507 AKAP7 258646 sc-eQTL 1.93e-01 0.134 0.103 0.84 cMono_S100A L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 8.86e-01 0.017 0.119 0.842 gdT L2
ENSG00000112282 MED23 -234129 sc-eQTL 1.00e+00 1.64e-05 0.133 0.842 gdT L2
ENSG00000118507 AKAP7 258646 sc-eQTL 1.66e-01 -0.192 0.138 0.842 gdT L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 6.53e-01 -0.0476 0.106 0.838 intMono L2
ENSG00000112282 MED23 -234129 sc-eQTL 1.17e-01 -0.178 0.113 0.838 intMono L2
ENSG00000118507 AKAP7 258646 sc-eQTL 7.06e-01 -0.0421 0.111 0.838 intMono L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 6.39e-01 0.0477 0.102 0.837 ncMono L2
ENSG00000112282 MED23 -234129 sc-eQTL 1.79e-01 0.149 0.11 0.837 ncMono L2
ENSG00000118507 AKAP7 258646 sc-eQTL 3.58e-01 0.0989 0.107 0.837 ncMono L2
ENSG00000079819 EPB41L2 330791 sc-eQTL 6.64e-01 -0.0556 0.128 0.845 pDC L2
ENSG00000112282 MED23 -234129 sc-eQTL 8.45e-02 0.222 0.128 0.845 pDC L2
ENSG00000118507 AKAP7 258646 sc-eQTL 3.06e-01 0.108 0.105 0.845 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 330791 sc-eQTL 3.38e-01 0.0936 0.0974 0.84 B_Memory LOneK1K
ENSG00000112282 MED23 -234129 sc-eQTL 2.43e-01 0.112 0.0956 0.84 B_Memory LOneK1K
ENSG00000118507 AKAP7 258646 sc-eQTL 6.38e-01 0.0459 0.0974 0.84 B_Memory LOneK1K
ENSG00000228495 LINC01013 -737775 sc-eQTL 9.17e-02 -0.168 0.0993 0.84 B_Memory LOneK1K
ENSG00000079819 EPB41L2 330791 sc-eQTL 1.93e-01 -0.108 0.0829 0.84 B_Naive LOneK1K
ENSG00000112282 MED23 -234129 sc-eQTL 5.57e-02 -0.176 0.0912 0.84 B_Naive LOneK1K
ENSG00000118507 AKAP7 258646 sc-eQTL 7.64e-01 -0.0349 0.116 0.84 B_Naive LOneK1K
ENSG00000228495 LINC01013 -737775 sc-eQTL 1.15e-02 -0.173 0.068 0.84 B_Naive LOneK1K
ENSG00000079819 EPB41L2 330791 sc-eQTL 7.08e-01 0.0365 0.0972 0.84 CD14_Mono LOneK1K
ENSG00000112282 MED23 -234129 sc-eQTL 6.83e-01 0.0383 0.0937 0.84 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 258646 sc-eQTL 1.79e-01 0.124 0.0916 0.84 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 330791 sc-eQTL 6.72e-01 -0.0434 0.102 0.838 CD16_Mono LOneK1K
ENSG00000112282 MED23 -234129 sc-eQTL 5.86e-01 -0.0567 0.104 0.838 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 258646 sc-eQTL 2.59e-01 0.121 0.106 0.838 CD16_Mono LOneK1K
ENSG00000112282 MED23 -234129 sc-eQTL 6.70e-01 0.0352 0.0823 0.838 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 258646 sc-eQTL 2.69e-01 -0.1 0.0906 0.838 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112282 MED23 -234129 eQTL 0.00474 0.06 0.0212 0.0 0.0 0.17
ENSG00000118507 AKAP7 258646 eQTL 0.00541 0.0735 0.0264 0.0 0.0 0.17
ENSG00000118520 ARG1 -179031 pQTL 2.61e-05 0.0767 0.0182 0.0 0.0 0.171
ENSG00000118520 ARG1 -179031 eQTL 2e-06 0.111 0.0232 0.0 0.0 0.17

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000118520 ARG1 -179031 1.93e-06 1.52e-06 2.29e-07 1.22e-06 3.68e-07 6.73e-07 1.24e-06 4.16e-07 1.73e-06 7.11e-07 2.07e-06 1.13e-06 2.64e-06 4.3e-07 3.61e-07 1.01e-06 1e-06 1.16e-06 5.81e-07 4.65e-07 7.49e-07 1.91e-06 1.46e-06 8.04e-07 2.45e-06 7.53e-07 1.03e-06 9.31e-07 1.69e-06 1.51e-06 8.07e-07 2.86e-07 2.96e-07 5.59e-07 6.46e-07 5.24e-07 6.8e-07 3.63e-07 5.35e-07 2.43e-07 3.68e-07 2.43e-06 3.43e-07 8.04e-08 2.99e-07 1.85e-07 2.6e-07 4.88e-08 2.04e-07