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Genes within 1Mb (chr6:131202526:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 139204 sc-eQTL 1.22e-01 0.129 0.0832 0.84 B L1
ENSG00000112282 MED23 -425716 sc-eQTL 1.07e-01 -0.148 0.0912 0.84 B L1
ENSG00000118507 AKAP7 67059 sc-eQTL 7.03e-02 -0.196 0.108 0.84 B L1
ENSG00000164483 SAMD3 837101 sc-eQTL 4.60e-01 -0.0708 0.0956 0.84 B L1
ENSG00000228495 LINC01013 -929362 sc-eQTL 9.67e-01 -0.003 0.0723 0.84 B L1
ENSG00000079819 EPB41L2 139204 sc-eQTL 6.42e-01 0.0507 0.109 0.84 CD4T L1
ENSG00000112282 MED23 -425716 sc-eQTL 7.48e-01 0.0226 0.0704 0.84 CD4T L1
ENSG00000118507 AKAP7 67059 sc-eQTL 8.14e-03 -0.248 0.093 0.84 CD4T L1
ENSG00000164483 SAMD3 837101 sc-eQTL 8.90e-01 -0.0115 0.0827 0.84 CD4T L1
ENSG00000112282 MED23 -425716 sc-eQTL 9.42e-01 -0.00625 0.0865 0.84 CD8T L1
ENSG00000118507 AKAP7 67059 sc-eQTL 8.48e-02 -0.169 0.0978 0.84 CD8T L1
ENSG00000164483 SAMD3 837101 sc-eQTL 6.28e-02 0.0839 0.0448 0.84 CD8T L1
ENSG00000079819 EPB41L2 139204 sc-eQTL 8.24e-01 0.0205 0.0918 0.838 DC L1
ENSG00000112282 MED23 -425716 sc-eQTL 4.96e-01 0.0803 0.118 0.838 DC L1
ENSG00000118507 AKAP7 67059 sc-eQTL 5.59e-03 -0.319 0.114 0.838 DC L1
ENSG00000079819 EPB41L2 139204 sc-eQTL 8.62e-01 0.0175 0.101 0.84 Mono L1
ENSG00000112282 MED23 -425716 sc-eQTL 7.58e-01 0.0302 0.0982 0.84 Mono L1
ENSG00000118507 AKAP7 67059 sc-eQTL 1.71e-02 -0.231 0.0962 0.84 Mono L1
ENSG00000112282 MED23 -425716 sc-eQTL 8.70e-01 -0.0137 0.0836 0.839 NK L1
ENSG00000118507 AKAP7 67059 sc-eQTL 4.19e-03 -0.284 0.0981 0.839 NK L1
ENSG00000164483 SAMD3 837101 sc-eQTL 4.44e-01 -0.0427 0.0557 0.839 NK L1
ENSG00000079819 EPB41L2 139204 sc-eQTL 8.14e-01 0.0243 0.103 0.84 Other_T L1
ENSG00000112282 MED23 -425716 sc-eQTL 9.36e-01 -0.00939 0.116 0.84 Other_T L1
ENSG00000118507 AKAP7 67059 sc-eQTL 1.48e-01 -0.147 0.101 0.84 Other_T L1
ENSG00000164483 SAMD3 837101 sc-eQTL 5.44e-01 -0.033 0.0543 0.84 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 139204 sc-eQTL 1.55e-01 0.159 0.111 0.837 B_Activated L2
ENSG00000112282 MED23 -425716 sc-eQTL 4.62e-01 0.0973 0.132 0.837 B_Activated L2
ENSG00000118507 AKAP7 67059 sc-eQTL 2.77e-01 -0.143 0.131 0.837 B_Activated L2
ENSG00000164483 SAMD3 837101 sc-eQTL 9.23e-02 -0.151 0.0891 0.837 B_Activated L2
ENSG00000228495 LINC01013 -929362 sc-eQTL 2.37e-01 0.134 0.113 0.837 B_Activated L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 1.30e-01 -0.177 0.116 0.839 B_Intermediate L2
ENSG00000112282 MED23 -425716 sc-eQTL 2.01e-01 0.144 0.112 0.839 B_Intermediate L2
ENSG00000118507 AKAP7 67059 sc-eQTL 3.16e-01 -0.115 0.114 0.839 B_Intermediate L2
ENSG00000164483 SAMD3 837101 sc-eQTL 2.70e-01 -0.106 0.0961 0.839 B_Intermediate L2
ENSG00000228495 LINC01013 -929362 sc-eQTL 8.24e-01 0.0233 0.105 0.839 B_Intermediate L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 2.76e-02 0.24 0.108 0.838 B_Memory L2
ENSG00000112282 MED23 -425716 sc-eQTL 1.74e-01 -0.156 0.114 0.838 B_Memory L2
ENSG00000118507 AKAP7 67059 sc-eQTL 1.09e-01 -0.191 0.119 0.838 B_Memory L2
ENSG00000164483 SAMD3 837101 sc-eQTL 4.24e-02 -0.22 0.108 0.838 B_Memory L2
ENSG00000228495 LINC01013 -929362 sc-eQTL 9.30e-01 0.00963 0.109 0.838 B_Memory L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 4.00e-01 0.0786 0.0933 0.84 B_Naive1 L2
ENSG00000112282 MED23 -425716 sc-eQTL 2.57e-01 -0.113 0.0991 0.84 B_Naive1 L2
ENSG00000118507 AKAP7 67059 sc-eQTL 2.88e-01 -0.132 0.124 0.84 B_Naive1 L2
ENSG00000164483 SAMD3 837101 sc-eQTL 9.62e-01 -0.0046 0.0972 0.84 B_Naive1 L2
ENSG00000228495 LINC01013 -929362 sc-eQTL 5.27e-01 -0.0497 0.0784 0.84 B_Naive1 L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 6.49e-02 0.196 0.105 0.839 B_Naive2 L2
ENSG00000112282 MED23 -425716 sc-eQTL 2.67e-03 -0.361 0.119 0.839 B_Naive2 L2
ENSG00000118507 AKAP7 67059 sc-eQTL 2.03e-01 -0.162 0.127 0.839 B_Naive2 L2
ENSG00000164483 SAMD3 837101 sc-eQTL 4.77e-01 0.0587 0.0825 0.839 B_Naive2 L2
ENSG00000228495 LINC01013 -929362 sc-eQTL 8.64e-01 0.0145 0.0843 0.839 B_Naive2 L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 8.12e-02 0.173 0.0988 0.841 CD4_CTL L2
ENSG00000112282 MED23 -425716 sc-eQTL 3.94e-01 0.109 0.127 0.841 CD4_CTL L2
ENSG00000118507 AKAP7 67059 sc-eQTL 6.50e-01 -0.0556 0.122 0.841 CD4_CTL L2
ENSG00000164483 SAMD3 837101 sc-eQTL 1.89e-01 -0.106 0.0801 0.841 CD4_CTL L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 1.15e-01 0.177 0.112 0.84 CD4_Naive L2
ENSG00000112282 MED23 -425716 sc-eQTL 3.80e-01 0.0716 0.0815 0.84 CD4_Naive L2
ENSG00000118507 AKAP7 67059 sc-eQTL 3.49e-02 -0.224 0.106 0.84 CD4_Naive L2
ENSG00000164483 SAMD3 837101 sc-eQTL 8.73e-01 0.0157 0.0983 0.84 CD4_Naive L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 5.34e-01 -0.0715 0.115 0.84 CD4_TCM L2
ENSG00000112282 MED23 -425716 sc-eQTL 3.16e-01 -0.0887 0.0882 0.84 CD4_TCM L2
ENSG00000118507 AKAP7 67059 sc-eQTL 7.93e-02 -0.18 0.102 0.84 CD4_TCM L2
ENSG00000164483 SAMD3 837101 sc-eQTL 5.17e-01 0.0607 0.0934 0.84 CD4_TCM L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 8.64e-01 -0.021 0.122 0.84 CD4_TEM L2
ENSG00000112282 MED23 -425716 sc-eQTL 1.87e-01 -0.148 0.112 0.84 CD4_TEM L2
ENSG00000118507 AKAP7 67059 sc-eQTL 2.02e-04 -0.453 0.12 0.84 CD4_TEM L2
ENSG00000164483 SAMD3 837101 sc-eQTL 2.66e-01 -0.0876 0.0785 0.84 CD4_TEM L2
ENSG00000112282 MED23 -425716 sc-eQTL 1.33e-01 0.16 0.106 0.84 CD8_CTL L2
ENSG00000118507 AKAP7 67059 sc-eQTL 9.68e-01 0.00477 0.12 0.84 CD8_CTL L2
ENSG00000164483 SAMD3 837101 sc-eQTL 5.98e-01 -0.0401 0.076 0.84 CD8_CTL L2
ENSG00000112282 MED23 -425716 sc-eQTL 9.14e-01 -0.0108 0.0992 0.84 CD8_Naive L2
ENSG00000118507 AKAP7 67059 sc-eQTL 5.69e-02 -0.213 0.111 0.84 CD8_Naive L2
ENSG00000164483 SAMD3 837101 sc-eQTL 4.63e-02 0.197 0.0985 0.84 CD8_Naive L2
ENSG00000112282 MED23 -425716 sc-eQTL 1.87e-01 -0.164 0.124 0.843 CD8_TCM L2
ENSG00000118507 AKAP7 67059 sc-eQTL 7.14e-01 -0.0491 0.133 0.843 CD8_TCM L2
ENSG00000164483 SAMD3 837101 sc-eQTL 9.99e-01 -9.35e-05 0.114 0.843 CD8_TCM L2
ENSG00000112282 MED23 -425716 sc-eQTL 5.64e-01 0.0721 0.125 0.842 CD8_TEM L2
ENSG00000118507 AKAP7 67059 sc-eQTL 3.48e-01 0.119 0.127 0.842 CD8_TEM L2
ENSG00000164483 SAMD3 837101 sc-eQTL 3.74e-02 0.188 0.0897 0.842 CD8_TEM L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 2.26e-01 0.135 0.111 0.84 MAIT L2
ENSG00000112282 MED23 -425716 sc-eQTL 9.35e-01 -0.00986 0.121 0.84 MAIT L2
ENSG00000118507 AKAP7 67059 sc-eQTL 1.50e-01 -0.173 0.119 0.84 MAIT L2
ENSG00000164483 SAMD3 837101 sc-eQTL 9.77e-01 -0.00204 0.0716 0.84 MAIT L2
ENSG00000112282 MED23 -425716 sc-eQTL 4.38e-01 0.0984 0.127 0.84 NK_CD56bright L2
ENSG00000118507 AKAP7 67059 sc-eQTL 3.69e-01 -0.11 0.123 0.84 NK_CD56bright L2
ENSG00000164483 SAMD3 837101 sc-eQTL 2.05e-02 -0.224 0.0961 0.84 NK_CD56bright L2
ENSG00000112282 MED23 -425716 sc-eQTL 6.35e-01 -0.0476 0.1 0.841 NK_CD56dim L2
ENSG00000118507 AKAP7 67059 sc-eQTL 8.93e-02 -0.18 0.106 0.841 NK_CD56dim L2
ENSG00000164483 SAMD3 837101 sc-eQTL 5.31e-01 0.0364 0.058 0.841 NK_CD56dim L2
ENSG00000112282 MED23 -425716 sc-eQTL 4.89e-01 0.0865 0.125 0.847 NK_HLA L2
ENSG00000118507 AKAP7 67059 sc-eQTL 7.68e-01 -0.0382 0.129 0.847 NK_HLA L2
ENSG00000164483 SAMD3 837101 sc-eQTL 9.57e-01 0.00574 0.106 0.847 NK_HLA L2
ENSG00000112282 MED23 -425716 sc-eQTL 5.07e-01 -0.0734 0.11 0.841 NK_cytokine L2
ENSG00000118507 AKAP7 67059 sc-eQTL 8.50e-02 -0.192 0.111 0.841 NK_cytokine L2
ENSG00000164483 SAMD3 837101 sc-eQTL 1.28e-01 -0.106 0.0693 0.841 NK_cytokine L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 4.20e-01 0.126 0.155 0.811 PB L2
ENSG00000112282 MED23 -425716 sc-eQTL 2.44e-01 0.171 0.146 0.811 PB L2
ENSG00000118507 AKAP7 67059 sc-eQTL 4.36e-01 0.111 0.142 0.811 PB L2
ENSG00000164483 SAMD3 837101 sc-eQTL 9.18e-01 -0.014 0.135 0.811 PB L2
ENSG00000228495 LINC01013 -929362 sc-eQTL 5.38e-01 -0.0568 0.0919 0.811 PB L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 8.59e-01 0.0194 0.109 0.839 Pro_T L2
ENSG00000112282 MED23 -425716 sc-eQTL 6.91e-01 0.0506 0.127 0.839 Pro_T L2
ENSG00000118507 AKAP7 67059 sc-eQTL 5.28e-01 -0.0688 0.109 0.839 Pro_T L2
ENSG00000164483 SAMD3 837101 sc-eQTL 4.75e-01 -0.0503 0.0703 0.839 Pro_T L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 8.87e-01 0.0168 0.117 0.84 Treg L2
ENSG00000112282 MED23 -425716 sc-eQTL 9.96e-01 -0.000673 0.121 0.84 Treg L2
ENSG00000118507 AKAP7 67059 sc-eQTL 2.04e-02 -0.24 0.103 0.84 Treg L2
ENSG00000164483 SAMD3 837101 sc-eQTL 8.12e-01 -0.0239 0.1 0.84 Treg L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 5.84e-01 0.057 0.104 0.839 cDC L2
ENSG00000112282 MED23 -425716 sc-eQTL 6.69e-01 -0.0573 0.134 0.839 cDC L2
ENSG00000118507 AKAP7 67059 sc-eQTL 5.82e-02 -0.245 0.129 0.839 cDC L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 6.24e-01 0.0539 0.11 0.84 cMono_IL1B L2
ENSG00000112282 MED23 -425716 sc-eQTL 6.30e-01 -0.052 0.108 0.84 cMono_IL1B L2
ENSG00000118507 AKAP7 67059 sc-eQTL 1.11e-02 -0.265 0.103 0.84 cMono_IL1B L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 9.33e-01 0.00969 0.114 0.84 cMono_S100A L2
ENSG00000112282 MED23 -425716 sc-eQTL 4.92e-01 0.0781 0.114 0.84 cMono_S100A L2
ENSG00000118507 AKAP7 67059 sc-eQTL 8.83e-02 -0.189 0.11 0.84 cMono_S100A L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 6.16e-01 -0.0668 0.133 0.848 gdT L2
ENSG00000112282 MED23 -425716 sc-eQTL 1.87e-01 -0.197 0.148 0.848 gdT L2
ENSG00000118507 AKAP7 67059 sc-eQTL 9.80e-01 -0.00393 0.156 0.848 gdT L2
ENSG00000164483 SAMD3 837101 sc-eQTL 2.85e-01 -0.127 0.118 0.848 gdT L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 5.77e-01 -0.0645 0.115 0.838 intMono L2
ENSG00000112282 MED23 -425716 sc-eQTL 4.19e-01 -0.101 0.124 0.838 intMono L2
ENSG00000118507 AKAP7 67059 sc-eQTL 2.56e-02 -0.27 0.12 0.838 intMono L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 4.32e-01 -0.0874 0.111 0.835 ncMono L2
ENSG00000112282 MED23 -425716 sc-eQTL 7.95e-02 0.212 0.12 0.835 ncMono L2
ENSG00000118507 AKAP7 67059 sc-eQTL 8.83e-01 0.0172 0.117 0.835 ncMono L2
ENSG00000079819 EPB41L2 139204 sc-eQTL 6.39e-01 -0.0642 0.137 0.833 pDC L2
ENSG00000112282 MED23 -425716 sc-eQTL 4.34e-01 0.108 0.138 0.833 pDC L2
ENSG00000118507 AKAP7 67059 sc-eQTL 4.36e-01 -0.0879 0.113 0.833 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 139204 sc-eQTL 9.34e-01 -0.00883 0.107 0.84 B_Memory LOneK1K
ENSG00000112282 MED23 -425716 sc-eQTL 4.12e-01 0.0861 0.105 0.84 B_Memory LOneK1K
ENSG00000118507 AKAP7 67059 sc-eQTL 1.29e-01 -0.162 0.106 0.84 B_Memory LOneK1K
ENSG00000164483 SAMD3 837101 sc-eQTL 2.45e-02 -0.238 0.105 0.84 B_Memory LOneK1K
ENSG00000228495 LINC01013 -929362 sc-eQTL 6.50e-01 0.0497 0.109 0.84 B_Memory LOneK1K
ENSG00000079819 EPB41L2 139204 sc-eQTL 2.10e-01 0.11 0.0878 0.84 B_Naive LOneK1K
ENSG00000112282 MED23 -425716 sc-eQTL 1.69e-02 -0.232 0.0962 0.84 B_Naive LOneK1K
ENSG00000118507 AKAP7 67059 sc-eQTL 5.30e-02 -0.237 0.122 0.84 B_Naive LOneK1K
ENSG00000164483 SAMD3 837101 sc-eQTL 9.62e-01 0.00502 0.105 0.84 B_Naive LOneK1K
ENSG00000228495 LINC01013 -929362 sc-eQTL 8.75e-01 -0.0116 0.0731 0.84 B_Naive LOneK1K
ENSG00000079819 EPB41L2 139204 sc-eQTL 7.18e-01 0.0382 0.106 0.84 CD14_Mono LOneK1K
ENSG00000112282 MED23 -425716 sc-eQTL 9.67e-01 -0.00427 0.102 0.84 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 67059 sc-eQTL 1.88e-02 -0.233 0.0986 0.84 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 139204 sc-eQTL 4.99e-01 -0.0752 0.111 0.838 CD16_Mono LOneK1K
ENSG00000112282 MED23 -425716 sc-eQTL 9.06e-01 -0.0133 0.113 0.838 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 67059 sc-eQTL 3.20e-01 -0.115 0.116 0.838 CD16_Mono LOneK1K
ENSG00000112282 MED23 -425716 sc-eQTL 4.81e-01 -0.0629 0.0891 0.841 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 67059 sc-eQTL 5.23e-03 -0.273 0.0966 0.841 NK_CD56dim LOneK1K
ENSG00000164483 SAMD3 837101 sc-eQTL 7.39e-01 -0.0179 0.0535 0.841 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079819 EPB41L2 139204 eQTL 0.0166 -0.0726 0.0302 0.0 0.0 0.142
ENSG00000118507 AKAP7 67059 eQTL 5.84e-07 -0.148 0.0293 0.0 0.0 0.142
ENSG00000154269 ENPP3 -425916 eQTL 0.0363 0.0734 0.035 0.0 0.0 0.142

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000118507 AKAP7 67059 7.7e-06 9.16e-06 1.29e-06 4.82e-06 2.4e-06 4.02e-06 9.61e-06 1.99e-06 8.03e-06 4.8e-06 1.08e-05 5.02e-06 1.31e-05 3.85e-06 2.36e-06 6.35e-06 3.83e-06 6.33e-06 2.6e-06 2.85e-06 4.94e-06 8.11e-06 6.89e-06 3.36e-06 1.26e-05 3.49e-06 4.74e-06 3.43e-06 8.8e-06 7.97e-06 4.84e-06 9.9e-07 1.19e-06 3.31e-06 3.81e-06 2.66e-06 1.78e-06 1.83e-06 2.15e-06 1.01e-06 9.26e-07 1.09e-05 1.25e-06 2.03e-07 7.53e-07 1.73e-06 1.32e-06 7.47e-07 4.52e-07
ENSG00000164484 \N 836792 2.67e-07 1.27e-07 4.98e-08 1.82e-07 1.01e-07 9.9e-08 1.61e-07 5.53e-08 1.45e-07 5.67e-08 1.52e-07 9.19e-08 1.53e-07 7.13e-08 6.12e-08 7.5e-08 4.01e-08 1.4e-07 6.07e-08 4.21e-08 1.22e-07 1.24e-07 1.45e-07 2.64e-08 1.55e-07 1.26e-07 1.1e-07 9.74e-08 1.2e-07 1.05e-07 1.02e-07 2.93e-08 3.73e-08 8.23e-08 5.99e-08 2.99e-08 5.29e-08 8.63e-08 6.63e-08 4.19e-08 4.92e-08 1.4e-07 5.2e-08 1.3e-08 3.42e-08 1.92e-08 1.21e-07 1.88e-09 5e-08