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Genes within 1Mb (chr6:131172510:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 109188 sc-eQTL 4.38e-02 0.133 0.0656 0.669 B L1
ENSG00000112282 MED23 -455732 sc-eQTL 3.12e-01 -0.0736 0.0725 0.669 B L1
ENSG00000118507 AKAP7 37043 sc-eQTL 1.24e-03 -0.275 0.084 0.669 B L1
ENSG00000164483 SAMD3 807085 sc-eQTL 2.46e-01 0.0878 0.0755 0.669 B L1
ENSG00000228495 LINC01013 -959378 sc-eQTL 6.23e-01 -0.0282 0.0572 0.669 B L1
ENSG00000079819 EPB41L2 109188 sc-eQTL 9.01e-01 0.0107 0.0864 0.669 CD4T L1
ENSG00000112282 MED23 -455732 sc-eQTL 8.08e-01 -0.0136 0.056 0.669 CD4T L1
ENSG00000118507 AKAP7 37043 sc-eQTL 6.62e-01 -0.0329 0.0751 0.669 CD4T L1
ENSG00000164483 SAMD3 807085 sc-eQTL 3.32e-01 0.0638 0.0656 0.669 CD4T L1
ENSG00000112282 MED23 -455732 sc-eQTL 7.59e-01 -0.0211 0.0688 0.669 CD8T L1
ENSG00000118507 AKAP7 37043 sc-eQTL 4.67e-01 -0.0569 0.0782 0.669 CD8T L1
ENSG00000164483 SAMD3 807085 sc-eQTL 4.71e-03 0.101 0.0353 0.669 CD8T L1
ENSG00000079819 EPB41L2 109188 sc-eQTL 7.88e-01 0.0198 0.0737 0.667 DC L1
ENSG00000112282 MED23 -455732 sc-eQTL 8.65e-01 0.0161 0.0948 0.667 DC L1
ENSG00000118507 AKAP7 37043 sc-eQTL 6.38e-01 0.044 0.0932 0.667 DC L1
ENSG00000079819 EPB41L2 109188 sc-eQTL 8.45e-03 0.211 0.0795 0.669 Mono L1
ENSG00000112282 MED23 -455732 sc-eQTL 3.35e-01 -0.0758 0.0784 0.669 Mono L1
ENSG00000118507 AKAP7 37043 sc-eQTL 1.54e-02 0.188 0.0769 0.669 Mono L1
ENSG00000112282 MED23 -455732 sc-eQTL 3.13e-01 -0.0659 0.0652 0.67 NK L1
ENSG00000118507 AKAP7 37043 sc-eQTL 4.67e-05 -0.313 0.0752 0.67 NK L1
ENSG00000164483 SAMD3 807085 sc-eQTL 4.98e-03 0.122 0.0428 0.67 NK L1
ENSG00000079819 EPB41L2 109188 sc-eQTL 7.89e-01 0.0217 0.0811 0.669 Other_T L1
ENSG00000112282 MED23 -455732 sc-eQTL 1.56e-01 0.13 0.0912 0.669 Other_T L1
ENSG00000118507 AKAP7 37043 sc-eQTL 4.88e-01 0.0555 0.08 0.669 Other_T L1
ENSG00000164483 SAMD3 807085 sc-eQTL 5.74e-01 0.0241 0.0427 0.669 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 109188 sc-eQTL 6.26e-01 -0.0436 0.0892 0.653 B_Activated L2
ENSG00000112282 MED23 -455732 sc-eQTL 3.34e-01 -0.102 0.105 0.653 B_Activated L2
ENSG00000118507 AKAP7 37043 sc-eQTL 4.22e-01 -0.0844 0.105 0.653 B_Activated L2
ENSG00000164483 SAMD3 807085 sc-eQTL 3.54e-01 -0.0664 0.0714 0.653 B_Activated L2
ENSG00000228495 LINC01013 -959378 sc-eQTL 1.35e-01 0.135 0.0899 0.653 B_Activated L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 8.62e-01 0.0161 0.0926 0.667 B_Intermediate L2
ENSG00000112282 MED23 -455732 sc-eQTL 9.26e-01 0.00829 0.0892 0.667 B_Intermediate L2
ENSG00000118507 AKAP7 37043 sc-eQTL 2.55e-02 -0.202 0.0896 0.667 B_Intermediate L2
ENSG00000164483 SAMD3 807085 sc-eQTL 4.61e-01 0.0563 0.0762 0.667 B_Intermediate L2
ENSG00000228495 LINC01013 -959378 sc-eQTL 8.12e-01 0.0198 0.0828 0.667 B_Intermediate L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 8.32e-02 0.151 0.0865 0.668 B_Memory L2
ENSG00000112282 MED23 -455732 sc-eQTL 8.49e-01 0.0174 0.0913 0.668 B_Memory L2
ENSG00000118507 AKAP7 37043 sc-eQTL 1.95e-01 -0.123 0.0947 0.668 B_Memory L2
ENSG00000164483 SAMD3 807085 sc-eQTL 6.24e-01 0.0425 0.0866 0.668 B_Memory L2
ENSG00000228495 LINC01013 -959378 sc-eQTL 3.25e-01 -0.0855 0.0866 0.668 B_Memory L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 1.41e-01 0.11 0.0745 0.669 B_Naive1 L2
ENSG00000112282 MED23 -455732 sc-eQTL 3.93e-01 -0.0681 0.0795 0.669 B_Naive1 L2
ENSG00000118507 AKAP7 37043 sc-eQTL 6.44e-02 -0.184 0.0989 0.669 B_Naive1 L2
ENSG00000164483 SAMD3 807085 sc-eQTL 6.28e-01 -0.0378 0.0779 0.669 B_Naive1 L2
ENSG00000228495 LINC01013 -959378 sc-eQTL 4.68e-01 -0.0456 0.0628 0.669 B_Naive1 L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 3.50e-01 0.078 0.0833 0.67 B_Naive2 L2
ENSG00000112282 MED23 -455732 sc-eQTL 3.48e-01 -0.0893 0.095 0.67 B_Naive2 L2
ENSG00000118507 AKAP7 37043 sc-eQTL 1.41e-02 -0.244 0.0986 0.67 B_Naive2 L2
ENSG00000164483 SAMD3 807085 sc-eQTL 5.74e-02 0.123 0.0643 0.67 B_Naive2 L2
ENSG00000228495 LINC01013 -959378 sc-eQTL 1.46e-01 -0.0963 0.0659 0.67 B_Naive2 L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 5.88e-01 0.043 0.0793 0.67 CD4_CTL L2
ENSG00000112282 MED23 -455732 sc-eQTL 9.74e-01 -0.00336 0.102 0.67 CD4_CTL L2
ENSG00000118507 AKAP7 37043 sc-eQTL 8.30e-02 -0.169 0.0968 0.67 CD4_CTL L2
ENSG00000164483 SAMD3 807085 sc-eQTL 7.95e-01 -0.0167 0.0641 0.67 CD4_CTL L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 8.70e-01 0.0147 0.0899 0.669 CD4_Naive L2
ENSG00000112282 MED23 -455732 sc-eQTL 7.72e-01 -0.0189 0.0651 0.669 CD4_Naive L2
ENSG00000118507 AKAP7 37043 sc-eQTL 5.70e-01 -0.0484 0.0851 0.669 CD4_Naive L2
ENSG00000164483 SAMD3 807085 sc-eQTL 3.41e-01 0.0747 0.0783 0.669 CD4_Naive L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 5.34e-01 -0.0572 0.0919 0.669 CD4_TCM L2
ENSG00000112282 MED23 -455732 sc-eQTL 8.66e-02 -0.121 0.0702 0.669 CD4_TCM L2
ENSG00000118507 AKAP7 37043 sc-eQTL 8.09e-01 -0.0199 0.082 0.669 CD4_TCM L2
ENSG00000164483 SAMD3 807085 sc-eQTL 1.80e-01 0.1 0.0744 0.669 CD4_TCM L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 6.10e-01 -0.0496 0.0972 0.669 CD4_TEM L2
ENSG00000112282 MED23 -455732 sc-eQTL 2.34e-02 0.202 0.0884 0.669 CD4_TEM L2
ENSG00000118507 AKAP7 37043 sc-eQTL 5.37e-03 -0.272 0.0966 0.669 CD4_TEM L2
ENSG00000164483 SAMD3 807085 sc-eQTL 1.14e-01 -0.0988 0.0623 0.669 CD4_TEM L2
ENSG00000112282 MED23 -455732 sc-eQTL 6.27e-01 -0.0408 0.0838 0.669 CD8_CTL L2
ENSG00000118507 AKAP7 37043 sc-eQTL 2.64e-01 -0.105 0.0935 0.669 CD8_CTL L2
ENSG00000164483 SAMD3 807085 sc-eQTL 1.11e-02 0.15 0.0587 0.669 CD8_CTL L2
ENSG00000112282 MED23 -455732 sc-eQTL 8.02e-01 0.0194 0.0775 0.669 CD8_Naive L2
ENSG00000118507 AKAP7 37043 sc-eQTL 7.87e-01 0.0237 0.0875 0.669 CD8_Naive L2
ENSG00000164483 SAMD3 807085 sc-eQTL 9.65e-03 0.2 0.0764 0.669 CD8_Naive L2
ENSG00000112282 MED23 -455732 sc-eQTL 5.43e-01 -0.0602 0.0989 0.674 CD8_TCM L2
ENSG00000118507 AKAP7 37043 sc-eQTL 8.60e-01 -0.0188 0.106 0.674 CD8_TCM L2
ENSG00000164483 SAMD3 807085 sc-eQTL 1.31e-01 0.136 0.09 0.674 CD8_TCM L2
ENSG00000112282 MED23 -455732 sc-eQTL 3.57e-01 -0.0914 0.0991 0.664 CD8_TEM L2
ENSG00000118507 AKAP7 37043 sc-eQTL 2.35e-02 -0.228 0.0997 0.664 CD8_TEM L2
ENSG00000164483 SAMD3 807085 sc-eQTL 6.72e-01 -0.0305 0.0721 0.664 CD8_TEM L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 5.40e-01 0.0536 0.0873 0.667 MAIT L2
ENSG00000112282 MED23 -455732 sc-eQTL 1.95e-01 0.123 0.0948 0.667 MAIT L2
ENSG00000118507 AKAP7 37043 sc-eQTL 6.03e-01 0.049 0.094 0.667 MAIT L2
ENSG00000164483 SAMD3 807085 sc-eQTL 8.87e-01 0.00798 0.0561 0.667 MAIT L2
ENSG00000112282 MED23 -455732 sc-eQTL 9.46e-01 -0.00707 0.104 0.678 NK_CD56bright L2
ENSG00000118507 AKAP7 37043 sc-eQTL 3.01e-02 -0.218 0.0999 0.678 NK_CD56bright L2
ENSG00000164483 SAMD3 807085 sc-eQTL 6.40e-01 0.0375 0.08 0.678 NK_CD56bright L2
ENSG00000112282 MED23 -455732 sc-eQTL 8.71e-01 -0.0127 0.0785 0.67 NK_CD56dim L2
ENSG00000118507 AKAP7 37043 sc-eQTL 2.15e-02 -0.191 0.0823 0.67 NK_CD56dim L2
ENSG00000164483 SAMD3 807085 sc-eQTL 1.81e-02 0.107 0.0449 0.67 NK_CD56dim L2
ENSG00000112282 MED23 -455732 sc-eQTL 4.24e-01 -0.0776 0.0968 0.683 NK_HLA L2
ENSG00000118507 AKAP7 37043 sc-eQTL 1.25e-02 -0.249 0.0989 0.683 NK_HLA L2
ENSG00000164483 SAMD3 807085 sc-eQTL 9.70e-01 -0.00312 0.0827 0.683 NK_HLA L2
ENSG00000112282 MED23 -455732 sc-eQTL 1.45e-02 -0.212 0.0859 0.67 NK_cytokine L2
ENSG00000118507 AKAP7 37043 sc-eQTL 1.15e-03 -0.283 0.0858 0.67 NK_cytokine L2
ENSG00000164483 SAMD3 807085 sc-eQTL 1.34e-01 0.0823 0.0547 0.67 NK_cytokine L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 4.29e-01 0.102 0.128 0.648 PB L2
ENSG00000112282 MED23 -455732 sc-eQTL 3.01e-01 0.125 0.12 0.648 PB L2
ENSG00000118507 AKAP7 37043 sc-eQTL 3.78e-01 0.104 0.117 0.648 PB L2
ENSG00000164483 SAMD3 807085 sc-eQTL 1.06e-01 0.18 0.11 0.648 PB L2
ENSG00000228495 LINC01013 -959378 sc-eQTL 3.56e-01 -0.0703 0.0758 0.648 PB L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 2.66e-01 -0.0965 0.0865 0.674 Pro_T L2
ENSG00000112282 MED23 -455732 sc-eQTL 5.02e-01 -0.0678 0.101 0.674 Pro_T L2
ENSG00000118507 AKAP7 37043 sc-eQTL 9.80e-01 0.00214 0.0865 0.674 Pro_T L2
ENSG00000164483 SAMD3 807085 sc-eQTL 8.39e-01 0.0114 0.0559 0.674 Pro_T L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 2.48e-01 0.108 0.0931 0.669 Treg L2
ENSG00000112282 MED23 -455732 sc-eQTL 9.64e-01 0.00433 0.096 0.669 Treg L2
ENSG00000118507 AKAP7 37043 sc-eQTL 5.00e-01 0.056 0.0827 0.669 Treg L2
ENSG00000164483 SAMD3 807085 sc-eQTL 2.04e-01 0.101 0.0794 0.669 Treg L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 9.97e-01 0.000275 0.0852 0.671 cDC L2
ENSG00000112282 MED23 -455732 sc-eQTL 3.48e-01 -0.103 0.109 0.671 cDC L2
ENSG00000118507 AKAP7 37043 sc-eQTL 4.59e-01 0.0787 0.106 0.671 cDC L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 7.89e-03 0.234 0.0872 0.669 cMono_IL1B L2
ENSG00000112282 MED23 -455732 sc-eQTL 6.52e-02 -0.16 0.0865 0.669 cMono_IL1B L2
ENSG00000118507 AKAP7 37043 sc-eQTL 1.99e-02 0.197 0.0838 0.669 cMono_IL1B L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 1.02e-01 0.15 0.0915 0.669 cMono_S100A L2
ENSG00000112282 MED23 -455732 sc-eQTL 9.48e-01 0.006 0.0914 0.669 cMono_S100A L2
ENSG00000118507 AKAP7 37043 sc-eQTL 1.12e-01 0.142 0.0889 0.669 cMono_S100A L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 6.83e-02 0.188 0.102 0.655 gdT L2
ENSG00000112282 MED23 -455732 sc-eQTL 4.47e-01 -0.0886 0.116 0.655 gdT L2
ENSG00000118507 AKAP7 37043 sc-eQTL 6.58e-01 -0.0538 0.121 0.655 gdT L2
ENSG00000164483 SAMD3 807085 sc-eQTL 9.25e-01 -0.00872 0.0923 0.655 gdT L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 9.58e-01 -0.00494 0.0939 0.671 intMono L2
ENSG00000112282 MED23 -455732 sc-eQTL 4.47e-01 -0.0769 0.101 0.671 intMono L2
ENSG00000118507 AKAP7 37043 sc-eQTL 5.77e-01 -0.0551 0.0986 0.671 intMono L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 1.50e-02 0.215 0.0875 0.672 ncMono L2
ENSG00000112282 MED23 -455732 sc-eQTL 8.67e-01 0.0162 0.0967 0.672 ncMono L2
ENSG00000118507 AKAP7 37043 sc-eQTL 1.54e-01 0.133 0.0933 0.672 ncMono L2
ENSG00000079819 EPB41L2 109188 sc-eQTL 6.36e-01 0.0527 0.111 0.667 pDC L2
ENSG00000112282 MED23 -455732 sc-eQTL 5.66e-01 0.0645 0.112 0.667 pDC L2
ENSG00000118507 AKAP7 37043 sc-eQTL 9.53e-01 -0.00543 0.0917 0.667 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 109188 sc-eQTL 4.62e-01 0.0617 0.0837 0.669 B_Memory LOneK1K
ENSG00000112282 MED23 -455732 sc-eQTL 8.84e-01 0.0121 0.0824 0.669 B_Memory LOneK1K
ENSG00000118507 AKAP7 37043 sc-eQTL 2.56e-02 -0.186 0.0827 0.669 B_Memory LOneK1K
ENSG00000164483 SAMD3 807085 sc-eQTL 3.82e-01 0.0731 0.0834 0.669 B_Memory LOneK1K
ENSG00000228495 LINC01013 -959378 sc-eQTL 6.99e-01 -0.0333 0.0859 0.669 B_Memory LOneK1K
ENSG00000079819 EPB41L2 109188 sc-eQTL 5.81e-02 0.133 0.0699 0.669 B_Naive LOneK1K
ENSG00000112282 MED23 -455732 sc-eQTL 1.30e-01 -0.118 0.0776 0.669 B_Naive LOneK1K
ENSG00000118507 AKAP7 37043 sc-eQTL 3.53e-03 -0.284 0.0963 0.669 B_Naive LOneK1K
ENSG00000164483 SAMD3 807085 sc-eQTL 8.57e-01 0.0153 0.0844 0.669 B_Naive LOneK1K
ENSG00000228495 LINC01013 -959378 sc-eQTL 6.69e-01 -0.025 0.0585 0.669 B_Naive LOneK1K
ENSG00000079819 EPB41L2 109188 sc-eQTL 1.10e-02 0.214 0.0835 0.669 CD14_Mono LOneK1K
ENSG00000112282 MED23 -455732 sc-eQTL 2.53e-01 -0.0934 0.0814 0.669 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 37043 sc-eQTL 1.40e-02 0.196 0.0791 0.669 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 109188 sc-eQTL 4.78e-01 0.0643 0.0905 0.668 CD16_Mono LOneK1K
ENSG00000112282 MED23 -455732 sc-eQTL 8.67e-01 -0.0155 0.0921 0.668 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 37043 sc-eQTL 3.19e-01 0.0942 0.0943 0.668 CD16_Mono LOneK1K
ENSG00000112282 MED23 -455732 sc-eQTL 4.01e-01 -0.059 0.0701 0.67 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 37043 sc-eQTL 5.20e-05 -0.308 0.0745 0.67 NK_CD56dim LOneK1K
ENSG00000164483 SAMD3 807085 sc-eQTL 1.76e-02 0.0995 0.0416 0.67 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079819 EPB41L2 109188 eQTL 0.000138 0.0826 0.0216 0.0 0.0 0.324
ENSG00000112282 MED23 -455732 eQTL 0.0325 0.0366 0.0171 0.0 0.0 0.324
ENSG00000118507 AKAP7 37043 eQTL 0.0397 0.0438 0.0213 0.0 0.0 0.324

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079819 EPB41L2 109188 6.16e-06 9.46e-06 7.72e-07 3.81e-06 1.66e-06 2.55e-06 8.96e-06 1.25e-06 4.88e-06 3.16e-06 8.58e-06 4.03e-06 1.04e-05 3.14e-06 1.18e-06 4.61e-06 3.7e-06 3.77e-06 1.58e-06 1.72e-06 2.74e-06 7.11e-06 5.11e-06 1.93e-06 9.69e-06 2.21e-06 3.47e-06 2.2e-06 6.43e-06 6.66e-06 3.51e-06 4.88e-07 8.05e-07 2.3e-06 2.4e-06 1.55e-06 1.08e-06 5.61e-07 1.12e-06 6.39e-07 5.19e-07 8.09e-06 8.49e-07 1.52e-07 6.98e-07 9.91e-07 9.59e-07 7.43e-07 4.68e-07