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Genes within 1Mb (chr6:131099324:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 36002 sc-eQTL 1.10e-02 -0.156 0.0607 0.31 B L1
ENSG00000112282 MED23 -528918 sc-eQTL 9.88e-01 -0.00102 0.0676 0.31 B L1
ENSG00000118507 AKAP7 -36143 sc-eQTL 1.78e-03 0.247 0.0781 0.31 B L1
ENSG00000164483 SAMD3 733899 sc-eQTL 6.40e-01 0.033 0.0704 0.31 B L1
ENSG00000079819 EPB41L2 36002 sc-eQTL 1.22e-02 -0.202 0.0798 0.31 CD4T L1
ENSG00000112282 MED23 -528918 sc-eQTL 6.29e-01 0.0254 0.0524 0.31 CD4T L1
ENSG00000118507 AKAP7 -36143 sc-eQTL 5.30e-01 0.0442 0.0703 0.31 CD4T L1
ENSG00000164483 SAMD3 733899 sc-eQTL 2.82e-01 0.0663 0.0615 0.31 CD4T L1
ENSG00000112282 MED23 -528918 sc-eQTL 4.43e-01 0.0493 0.0642 0.31 CD8T L1
ENSG00000118507 AKAP7 -36143 sc-eQTL 9.30e-01 -0.00641 0.0732 0.31 CD8T L1
ENSG00000164483 SAMD3 733899 sc-eQTL 2.76e-01 0.0366 0.0335 0.31 CD8T L1
ENSG00000079819 EPB41L2 36002 sc-eQTL 2.57e-06 -0.317 0.0655 0.304 DC L1
ENSG00000112282 MED23 -528918 sc-eQTL 5.78e-01 -0.0495 0.0889 0.304 DC L1
ENSG00000118507 AKAP7 -36143 sc-eQTL 8.87e-02 -0.149 0.0869 0.304 DC L1
ENSG00000079819 EPB41L2 36002 sc-eQTL 3.52e-09 -0.424 0.0687 0.31 Mono L1
ENSG00000112282 MED23 -528918 sc-eQTL 3.63e-02 0.151 0.0718 0.31 Mono L1
ENSG00000118507 AKAP7 -36143 sc-eQTL 1.34e-01 -0.108 0.0716 0.31 Mono L1
ENSG00000112282 MED23 -528918 sc-eQTL 6.38e-01 0.0289 0.0615 0.309 NK L1
ENSG00000118507 AKAP7 -36143 sc-eQTL 8.72e-01 -0.0119 0.0736 0.309 NK L1
ENSG00000164483 SAMD3 733899 sc-eQTL 8.71e-01 -0.00666 0.041 0.309 NK L1
ENSG00000227678 AL355581.1 953145 sc-eQTL 9.89e-01 -0.00119 0.0837 0.309 NK L1
ENSG00000079819 EPB41L2 36002 sc-eQTL 8.82e-01 0.0111 0.075 0.31 Other_T L1
ENSG00000112282 MED23 -528918 sc-eQTL 9.02e-01 0.0104 0.0848 0.31 Other_T L1
ENSG00000118507 AKAP7 -36143 sc-eQTL 5.39e-02 0.142 0.0735 0.31 Other_T L1
ENSG00000164483 SAMD3 733899 sc-eQTL 9.98e-01 0.000107 0.0396 0.31 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 36002 sc-eQTL 2.68e-01 0.0924 0.0831 0.309 B_Activated L2
ENSG00000112282 MED23 -528918 sc-eQTL 7.14e-01 0.0361 0.0983 0.309 B_Activated L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 9.26e-01 -0.00906 0.098 0.309 B_Activated L2
ENSG00000164483 SAMD3 733899 sc-eQTL 5.77e-01 -0.0373 0.0668 0.309 B_Activated L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 3.04e-02 -0.185 0.085 0.311 B_Intermediate L2
ENSG00000112282 MED23 -528918 sc-eQTL 8.41e-01 -0.0167 0.0827 0.311 B_Intermediate L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 4.31e-01 0.0663 0.084 0.311 B_Intermediate L2
ENSG00000164483 SAMD3 733899 sc-eQTL 9.27e-01 0.00649 0.0708 0.311 B_Intermediate L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 9.59e-01 0.00416 0.0807 0.308 B_Memory L2
ENSG00000112282 MED23 -528918 sc-eQTL 5.53e-01 -0.0502 0.0845 0.308 B_Memory L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 6.42e-01 0.041 0.088 0.308 B_Memory L2
ENSG00000164483 SAMD3 733899 sc-eQTL 8.77e-01 -0.0124 0.0803 0.308 B_Memory L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 2.64e-03 -0.205 0.0673 0.31 B_Naive1 L2
ENSG00000112282 MED23 -528918 sc-eQTL 7.54e-01 -0.0229 0.0732 0.31 B_Naive1 L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 9.11e-04 0.3 0.0892 0.31 B_Naive1 L2
ENSG00000164483 SAMD3 733899 sc-eQTL 6.45e-01 -0.033 0.0716 0.31 B_Naive1 L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 2.35e-01 -0.0925 0.0777 0.309 B_Naive2 L2
ENSG00000112282 MED23 -528918 sc-eQTL 7.83e-01 0.0246 0.0889 0.309 B_Naive2 L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 1.29e-01 0.142 0.0929 0.309 B_Naive2 L2
ENSG00000164483 SAMD3 733899 sc-eQTL 3.87e-01 -0.0524 0.0605 0.309 B_Naive2 L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 4.78e-03 -0.202 0.0709 0.316 CD4_CTL L2
ENSG00000112282 MED23 -528918 sc-eQTL 7.62e-01 0.0281 0.0927 0.316 CD4_CTL L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 2.99e-01 -0.0923 0.0886 0.316 CD4_CTL L2
ENSG00000164483 SAMD3 733899 sc-eQTL 3.68e-01 0.0526 0.0583 0.316 CD4_CTL L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 4.66e-02 -0.166 0.0829 0.31 CD4_Naive L2
ENSG00000112282 MED23 -528918 sc-eQTL 6.11e-01 0.0309 0.0606 0.31 CD4_Naive L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 4.21e-01 0.0639 0.0792 0.31 CD4_Naive L2
ENSG00000164483 SAMD3 733899 sc-eQTL 5.31e-01 0.0458 0.073 0.31 CD4_Naive L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 4.08e-02 -0.174 0.0844 0.31 CD4_TCM L2
ENSG00000112282 MED23 -528918 sc-eQTL 9.81e-01 0.00158 0.0654 0.31 CD4_TCM L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 8.86e-01 -0.0109 0.0759 0.31 CD4_TCM L2
ENSG00000164483 SAMD3 733899 sc-eQTL 1.29e-01 0.105 0.0689 0.31 CD4_TCM L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 5.74e-01 0.0506 0.0898 0.31 CD4_TEM L2
ENSG00000112282 MED23 -528918 sc-eQTL 8.78e-01 0.0127 0.0828 0.31 CD4_TEM L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 4.90e-01 0.0628 0.0908 0.31 CD4_TEM L2
ENSG00000164483 SAMD3 733899 sc-eQTL 4.50e-01 0.0438 0.0578 0.31 CD4_TEM L2
ENSG00000112282 MED23 -528918 sc-eQTL 2.48e-01 0.0913 0.0788 0.31 CD8_CTL L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 8.99e-01 0.0112 0.0884 0.31 CD8_CTL L2
ENSG00000164483 SAMD3 733899 sc-eQTL 8.66e-01 0.00949 0.0562 0.31 CD8_CTL L2
ENSG00000112282 MED23 -528918 sc-eQTL 9.00e-01 0.0092 0.0728 0.31 CD8_Naive L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 8.98e-01 -0.0105 0.0822 0.31 CD8_Naive L2
ENSG00000164483 SAMD3 733899 sc-eQTL 8.67e-01 -0.0122 0.0729 0.31 CD8_Naive L2
ENSG00000112282 MED23 -528918 sc-eQTL 1.99e-01 -0.114 0.0885 0.315 CD8_TCM L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 7.11e-01 0.0354 0.0954 0.315 CD8_TCM L2
ENSG00000164483 SAMD3 733899 sc-eQTL 5.26e-01 0.0516 0.0813 0.315 CD8_TCM L2
ENSG00000112282 MED23 -528918 sc-eQTL 4.13e-02 0.185 0.0901 0.308 CD8_TEM L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 8.09e-01 -0.0224 0.0926 0.308 CD8_TEM L2
ENSG00000164483 SAMD3 733899 sc-eQTL 2.92e-01 0.0696 0.0659 0.308 CD8_TEM L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 6.30e-01 -0.0398 0.0824 0.31 MAIT L2
ENSG00000112282 MED23 -528918 sc-eQTL 5.90e-01 0.0484 0.0898 0.31 MAIT L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 1.37e-01 0.132 0.0883 0.31 MAIT L2
ENSG00000164483 SAMD3 733899 sc-eQTL 5.71e-01 0.03 0.0529 0.31 MAIT L2
ENSG00000112282 MED23 -528918 sc-eQTL 2.19e-01 0.116 0.0942 0.311 NK_CD56bright L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 8.58e-01 -0.0164 0.0917 0.311 NK_CD56bright L2
ENSG00000164483 SAMD3 733899 sc-eQTL 3.17e-01 -0.0726 0.0724 0.311 NK_CD56bright L2
ENSG00000227678 AL355581.1 953145 sc-eQTL 4.31e-01 0.0663 0.084 0.311 NK_CD56bright L2
ENSG00000112282 MED23 -528918 sc-eQTL 4.78e-01 -0.0525 0.0739 0.31 NK_CD56dim L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 6.03e-01 0.0409 0.0785 0.31 NK_CD56dim L2
ENSG00000164483 SAMD3 733899 sc-eQTL 8.86e-01 0.00617 0.0429 0.31 NK_CD56dim L2
ENSG00000227678 AL355581.1 953145 sc-eQTL 9.48e-01 -0.00568 0.0867 0.31 NK_CD56dim L2
ENSG00000112282 MED23 -528918 sc-eQTL 8.94e-01 -0.0119 0.0893 0.315 NK_HLA L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 2.68e-01 0.102 0.0923 0.315 NK_HLA L2
ENSG00000164483 SAMD3 733899 sc-eQTL 6.93e-01 0.0301 0.0762 0.315 NK_HLA L2
ENSG00000227678 AL355581.1 953145 sc-eQTL 6.90e-01 0.0336 0.0843 0.315 NK_HLA L2
ENSG00000112282 MED23 -528918 sc-eQTL 3.36e-01 0.0782 0.0812 0.31 NK_cytokine L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 8.31e-01 0.0176 0.0821 0.31 NK_cytokine L2
ENSG00000164483 SAMD3 733899 sc-eQTL 7.93e-01 0.0134 0.0513 0.31 NK_cytokine L2
ENSG00000227678 AL355581.1 953145 sc-eQTL 5.39e-01 0.0545 0.0886 0.31 NK_cytokine L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 2.00e-01 0.155 0.12 0.289 PB L2
ENSG00000112282 MED23 -528918 sc-eQTL 4.53e-01 -0.0859 0.114 0.289 PB L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 1.64e-01 -0.155 0.11 0.289 PB L2
ENSG00000164483 SAMD3 733899 sc-eQTL 8.81e-01 0.0159 0.106 0.289 PB L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 4.11e-01 0.0642 0.078 0.313 Pro_T L2
ENSG00000112282 MED23 -528918 sc-eQTL 4.09e-01 -0.075 0.0907 0.313 Pro_T L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 5.13e-01 0.051 0.0778 0.313 Pro_T L2
ENSG00000164483 SAMD3 733899 sc-eQTL 1.03e-01 0.0819 0.05 0.313 Pro_T L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 7.07e-01 -0.0327 0.087 0.31 Treg L2
ENSG00000112282 MED23 -528918 sc-eQTL 4.59e-01 -0.0663 0.0895 0.31 Treg L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 8.08e-02 -0.135 0.0767 0.31 Treg L2
ENSG00000164483 SAMD3 733899 sc-eQTL 9.04e-02 -0.126 0.0739 0.31 Treg L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 1.34e-06 -0.368 0.0736 0.31 cDC L2
ENSG00000112282 MED23 -528918 sc-eQTL 1.78e-01 0.136 0.1 0.31 cDC L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 1.57e-01 -0.138 0.0974 0.31 cDC L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 1.95e-06 -0.377 0.077 0.31 cMono_IL1B L2
ENSG00000112282 MED23 -528918 sc-eQTL 2.42e-01 0.0934 0.0796 0.31 cMono_IL1B L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 2.19e-01 -0.0955 0.0774 0.31 cMono_IL1B L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 1.00e-02 -0.216 0.0833 0.31 cMono_S100A L2
ENSG00000112282 MED23 -528918 sc-eQTL 9.81e-02 0.139 0.0834 0.31 cMono_S100A L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 1.78e-01 -0.111 0.0818 0.31 cMono_S100A L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 4.55e-01 -0.0718 0.096 0.324 gdT L2
ENSG00000112282 MED23 -528918 sc-eQTL 9.59e-01 0.00555 0.108 0.324 gdT L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 9.48e-01 0.0074 0.113 0.324 gdT L2
ENSG00000164483 SAMD3 733899 sc-eQTL 4.52e-01 0.0646 0.0856 0.324 gdT L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 1.71e-06 -0.404 0.0818 0.311 intMono L2
ENSG00000112282 MED23 -528918 sc-eQTL 5.08e-01 0.0618 0.0932 0.311 intMono L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 8.64e-01 0.0156 0.091 0.311 intMono L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 9.78e-04 -0.268 0.0799 0.305 ncMono L2
ENSG00000112282 MED23 -528918 sc-eQTL 3.39e-01 0.0856 0.0893 0.305 ncMono L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 5.06e-01 0.0578 0.0867 0.305 ncMono L2
ENSG00000079819 EPB41L2 36002 sc-eQTL 8.76e-01 0.0159 0.102 0.308 pDC L2
ENSG00000112282 MED23 -528918 sc-eQTL 2.00e-01 -0.132 0.103 0.308 pDC L2
ENSG00000118507 AKAP7 -36143 sc-eQTL 5.70e-01 0.0479 0.0842 0.308 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 36002 sc-eQTL 2.84e-01 -0.0827 0.0769 0.31 B_Memory LOneK1K
ENSG00000112282 MED23 -528918 sc-eQTL 6.85e-01 0.0308 0.0757 0.31 B_Memory LOneK1K
ENSG00000118507 AKAP7 -36143 sc-eQTL 5.79e-01 0.0427 0.077 0.31 B_Memory LOneK1K
ENSG00000164483 SAMD3 733899 sc-eQTL 7.41e-01 -0.0254 0.0768 0.31 B_Memory LOneK1K
ENSG00000079819 EPB41L2 36002 sc-eQTL 3.95e-03 -0.186 0.0639 0.31 B_Naive LOneK1K
ENSG00000112282 MED23 -528918 sc-eQTL 9.78e-01 -0.00199 0.0721 0.31 B_Naive LOneK1K
ENSG00000118507 AKAP7 -36143 sc-eQTL 2.94e-04 0.324 0.0881 0.31 B_Naive LOneK1K
ENSG00000164483 SAMD3 733899 sc-eQTL 4.28e-01 -0.0619 0.0779 0.31 B_Naive LOneK1K
ENSG00000079819 EPB41L2 36002 sc-eQTL 1.30e-07 -0.398 0.0728 0.31 CD14_Mono LOneK1K
ENSG00000112282 MED23 -528918 sc-eQTL 5.24e-02 0.145 0.0742 0.31 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 -36143 sc-eQTL 1.38e-01 -0.109 0.0731 0.31 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 36002 sc-eQTL 7.01e-06 -0.368 0.0798 0.306 CD16_Mono LOneK1K
ENSG00000112282 MED23 -528918 sc-eQTL 6.78e-01 0.0354 0.0851 0.306 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 -36143 sc-eQTL 5.90e-01 -0.0471 0.0873 0.306 CD16_Mono LOneK1K
ENSG00000112282 MED23 -528918 sc-eQTL 8.33e-01 -0.0139 0.0655 0.31 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 -36143 sc-eQTL 7.34e-01 0.0246 0.0723 0.31 NK_CD56dim LOneK1K
ENSG00000164483 SAMD3 733899 sc-eQTL 7.40e-01 0.013 0.0393 0.31 NK_CD56dim LOneK1K
ENSG00000227678 AL355581.1 953145 sc-eQTL 9.94e-01 0.0006 0.0849 0.31 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079819 EPB41L2 36002 eQTL 2.5800000000000002e-37 -0.277 0.0208 0.0 0.0 0.296

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079819 EPB41L2 36002 1.13e-05 1.25e-05 2.5e-06 7.53e-06 2.47e-06 6.03e-06 1.56e-05 2.2e-06 1.17e-05 6.02e-06 1.59e-05 6.55e-06 2.17e-05 4.46e-06 3.8e-06 8.21e-06 6.79e-06 1.12e-05 3.58e-06 3.59e-06 6.73e-06 1.2e-05 1.22e-05 4.71e-06 2.21e-05 4.94e-06 7.14e-06 5.26e-06 1.46e-05 1.45e-05 7.65e-06 1.2e-06 1.4e-06 4.35e-06 5.55e-06 3.8e-06 1.87e-06 2.4e-06 2.99e-06 2.03e-06 1.63e-06 1.58e-05 1.8e-06 3.62e-07 1.78e-06 2.28e-06 2.32e-06 1.16e-06 9.21e-07