logo

Genes within 1Mb (chr6:131090149:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 26827 sc-eQTL 1.30e-06 -0.278 0.0558 0.59 B L1
ENSG00000112282 MED23 -538093 sc-eQTL 8.52e-01 0.0121 0.0647 0.59 B L1
ENSG00000118507 AKAP7 -45318 sc-eQTL 1.41e-06 0.36 0.0725 0.59 B L1
ENSG00000164483 SAMD3 724724 sc-eQTL 5.76e-01 0.0378 0.0674 0.59 B L1
ENSG00000079819 EPB41L2 26827 sc-eQTL 8.57e-03 -0.204 0.077 0.59 CD4T L1
ENSG00000112282 MED23 -538093 sc-eQTL 4.09e-01 0.0419 0.0506 0.59 CD4T L1
ENSG00000118507 AKAP7 -45318 sc-eQTL 3.44e-04 0.24 0.066 0.59 CD4T L1
ENSG00000164483 SAMD3 724724 sc-eQTL 9.94e-01 -0.000449 0.0596 0.59 CD4T L1
ENSG00000112282 MED23 -538093 sc-eQTL 8.37e-01 0.0131 0.0636 0.59 CD8T L1
ENSG00000118507 AKAP7 -45318 sc-eQTL 8.43e-04 0.239 0.0705 0.59 CD8T L1
ENSG00000164483 SAMD3 724724 sc-eQTL 6.49e-01 0.0151 0.0332 0.59 CD8T L1
ENSG00000079819 EPB41L2 26827 sc-eQTL 3.50e-04 -0.23 0.0631 0.588 DC L1
ENSG00000112282 MED23 -538093 sc-eQTL 4.99e-01 -0.0567 0.0837 0.588 DC L1
ENSG00000118507 AKAP7 -45318 sc-eQTL 7.20e-01 -0.0295 0.0824 0.588 DC L1
ENSG00000079819 EPB41L2 26827 sc-eQTL 1.38e-09 -0.421 0.0663 0.59 Mono L1
ENSG00000112282 MED23 -538093 sc-eQTL 1.71e-03 0.218 0.0687 0.59 Mono L1
ENSG00000118507 AKAP7 -45318 sc-eQTL 2.78e-01 -0.0758 0.0696 0.59 Mono L1
ENSG00000112282 MED23 -538093 sc-eQTL 2.11e-01 0.0738 0.0588 0.59 NK L1
ENSG00000118507 AKAP7 -45318 sc-eQTL 3.13e-02 0.151 0.0698 0.59 NK L1
ENSG00000164483 SAMD3 724724 sc-eQTL 3.71e-01 0.0352 0.0393 0.59 NK L1
ENSG00000227678 AL355581.1 943970 sc-eQTL 7.23e-01 0.0285 0.0803 0.59 NK L1
ENSG00000079819 EPB41L2 26827 sc-eQTL 4.34e-01 -0.057 0.0727 0.59 Other_T L1
ENSG00000112282 MED23 -538093 sc-eQTL 3.50e-01 -0.0769 0.0822 0.59 Other_T L1
ENSG00000118507 AKAP7 -45318 sc-eQTL 1.22e-03 0.23 0.0702 0.59 Other_T L1
ENSG00000164483 SAMD3 724724 sc-eQTL 9.13e-01 0.00422 0.0384 0.59 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 26827 sc-eQTL 9.66e-01 0.00329 0.0777 0.587 B_Activated L2
ENSG00000112282 MED23 -538093 sc-eQTL 2.29e-01 0.11 0.0912 0.587 B_Activated L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 9.10e-01 -0.0103 0.0913 0.587 B_Activated L2
ENSG00000164483 SAMD3 724724 sc-eQTL 6.75e-01 0.0261 0.0623 0.587 B_Activated L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 3.62e-04 -0.292 0.0806 0.59 B_Intermediate L2
ENSG00000112282 MED23 -538093 sc-eQTL 6.54e-02 -0.147 0.0794 0.59 B_Intermediate L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 3.81e-02 0.168 0.0805 0.59 B_Intermediate L2
ENSG00000164483 SAMD3 724724 sc-eQTL 5.91e-01 -0.0369 0.0684 0.59 B_Intermediate L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 2.22e-01 -0.0954 0.0778 0.588 B_Memory L2
ENSG00000112282 MED23 -538093 sc-eQTL 5.93e-01 0.0438 0.0818 0.588 B_Memory L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 2.81e-01 0.0919 0.085 0.588 B_Memory L2
ENSG00000164483 SAMD3 724724 sc-eQTL 1.70e-01 0.106 0.0773 0.588 B_Memory L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 1.76e-05 -0.28 0.0636 0.59 B_Naive1 L2
ENSG00000112282 MED23 -538093 sc-eQTL 6.68e-01 0.0304 0.0707 0.59 B_Naive1 L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 6.52e-06 0.39 0.0843 0.59 B_Naive1 L2
ENSG00000164483 SAMD3 724724 sc-eQTL 5.31e-01 -0.0433 0.0691 0.59 B_Naive1 L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 2.60e-02 -0.169 0.0755 0.588 B_Naive2 L2
ENSG00000112282 MED23 -538093 sc-eQTL 2.07e-02 0.2 0.086 0.588 B_Naive2 L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 4.13e-03 0.26 0.0897 0.588 B_Naive2 L2
ENSG00000164483 SAMD3 724724 sc-eQTL 3.68e-01 -0.0534 0.0592 0.588 B_Naive2 L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 3.84e-03 -0.202 0.0691 0.591 CD4_CTL L2
ENSG00000112282 MED23 -538093 sc-eQTL 2.85e-01 0.0969 0.0903 0.591 CD4_CTL L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 5.76e-01 0.0486 0.0867 0.591 CD4_CTL L2
ENSG00000164483 SAMD3 724724 sc-eQTL 6.56e-02 0.105 0.0566 0.591 CD4_CTL L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 2.25e-02 -0.183 0.0797 0.59 CD4_Naive L2
ENSG00000112282 MED23 -538093 sc-eQTL 5.53e-01 0.0347 0.0585 0.59 CD4_Naive L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 1.11e-03 0.247 0.0746 0.59 CD4_Naive L2
ENSG00000164483 SAMD3 724724 sc-eQTL 8.04e-01 -0.0175 0.0704 0.59 CD4_Naive L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 1.63e-01 -0.115 0.0825 0.59 CD4_TCM L2
ENSG00000112282 MED23 -538093 sc-eQTL 1.63e-01 0.0887 0.0634 0.59 CD4_TCM L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 8.89e-02 0.125 0.0734 0.59 CD4_TCM L2
ENSG00000164483 SAMD3 724724 sc-eQTL 9.46e-01 0.00457 0.0674 0.59 CD4_TCM L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 6.85e-01 0.0356 0.0875 0.59 CD4_TEM L2
ENSG00000112282 MED23 -538093 sc-eQTL 9.36e-01 0.00649 0.0807 0.59 CD4_TEM L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 2.87e-02 0.193 0.0876 0.59 CD4_TEM L2
ENSG00000164483 SAMD3 724724 sc-eQTL 9.58e-02 0.0938 0.056 0.59 CD4_TEM L2
ENSG00000112282 MED23 -538093 sc-eQTL 1.79e-01 0.102 0.0754 0.59 CD8_CTL L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 4.33e-02 0.171 0.0839 0.59 CD8_CTL L2
ENSG00000164483 SAMD3 724724 sc-eQTL 2.48e-01 0.0622 0.0537 0.59 CD8_CTL L2
ENSG00000112282 MED23 -538093 sc-eQTL 8.16e-01 0.0166 0.0712 0.59 CD8_Naive L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 1.44e-02 0.195 0.0792 0.59 CD8_Naive L2
ENSG00000164483 SAMD3 724724 sc-eQTL 5.88e-01 -0.0387 0.0712 0.59 CD8_Naive L2
ENSG00000112282 MED23 -538093 sc-eQTL 5.49e-01 -0.053 0.0884 0.588 CD8_TCM L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 5.30e-01 0.0597 0.0949 0.588 CD8_TCM L2
ENSG00000164483 SAMD3 724724 sc-eQTL 4.33e-01 0.0635 0.0809 0.588 CD8_TCM L2
ENSG00000112282 MED23 -538093 sc-eQTL 1.27e-01 0.135 0.0881 0.587 CD8_TEM L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 7.85e-02 0.158 0.0894 0.587 CD8_TEM L2
ENSG00000164483 SAMD3 724724 sc-eQTL 7.83e-01 0.0177 0.0643 0.587 CD8_TEM L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 6.94e-01 -0.032 0.0812 0.587 MAIT L2
ENSG00000112282 MED23 -538093 sc-eQTL 9.48e-01 0.00577 0.0885 0.587 MAIT L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 1.62e-02 0.209 0.0862 0.587 MAIT L2
ENSG00000164483 SAMD3 724724 sc-eQTL 4.80e-01 0.0369 0.0521 0.587 MAIT L2
ENSG00000112282 MED23 -538093 sc-eQTL 5.50e-01 0.0544 0.0907 0.593 NK_CD56bright L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 7.31e-01 -0.0303 0.088 0.593 NK_CD56bright L2
ENSG00000164483 SAMD3 724724 sc-eQTL 8.68e-01 0.0116 0.0697 0.593 NK_CD56bright L2
ENSG00000227678 AL355581.1 943970 sc-eQTL 3.73e-01 0.072 0.0807 0.593 NK_CD56bright L2
ENSG00000112282 MED23 -538093 sc-eQTL 5.18e-01 0.0458 0.0708 0.591 NK_CD56dim L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 2.36e-02 0.169 0.0743 0.591 NK_CD56dim L2
ENSG00000164483 SAMD3 724724 sc-eQTL 5.51e-01 0.0245 0.041 0.591 NK_CD56dim L2
ENSG00000227678 AL355581.1 943970 sc-eQTL 6.40e-01 0.0388 0.0829 0.591 NK_CD56dim L2
ENSG00000112282 MED23 -538093 sc-eQTL 2.63e-01 -0.0974 0.0867 0.596 NK_HLA L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 3.16e-04 0.32 0.0872 0.596 NK_HLA L2
ENSG00000164483 SAMD3 724724 sc-eQTL 3.44e-01 0.0702 0.074 0.596 NK_HLA L2
ENSG00000227678 AL355581.1 943970 sc-eQTL 8.52e-02 0.141 0.0815 0.596 NK_HLA L2
ENSG00000112282 MED23 -538093 sc-eQTL 1.00e-01 0.128 0.0774 0.591 NK_cytokine L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 7.94e-02 0.138 0.0781 0.591 NK_cytokine L2
ENSG00000164483 SAMD3 724724 sc-eQTL 5.94e-02 0.0924 0.0487 0.591 NK_cytokine L2
ENSG00000227678 AL355581.1 943970 sc-eQTL 7.67e-01 0.0252 0.0849 0.591 NK_cytokine L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 9.90e-01 -0.00148 0.115 0.604 PB L2
ENSG00000112282 MED23 -538093 sc-eQTL 4.75e-01 -0.0776 0.108 0.604 PB L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 3.54e-01 -0.098 0.105 0.604 PB L2
ENSG00000164483 SAMD3 724724 sc-eQTL 8.06e-01 0.0247 0.1 0.604 PB L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 7.26e-01 -0.0269 0.0765 0.591 Pro_T L2
ENSG00000112282 MED23 -538093 sc-eQTL 9.05e-02 -0.15 0.0883 0.591 Pro_T L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 3.36e-01 0.0734 0.0761 0.591 Pro_T L2
ENSG00000164483 SAMD3 724724 sc-eQTL 1.95e-01 0.0637 0.0491 0.591 Pro_T L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 3.33e-02 -0.18 0.0839 0.59 Treg L2
ENSG00000112282 MED23 -538093 sc-eQTL 2.79e-01 -0.0944 0.087 0.59 Treg L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 1.91e-01 0.0984 0.0749 0.59 Treg L2
ENSG00000164483 SAMD3 724724 sc-eQTL 8.04e-02 -0.126 0.0719 0.59 Treg L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 4.94e-05 -0.297 0.0713 0.585 cDC L2
ENSG00000112282 MED23 -538093 sc-eQTL 4.78e-01 0.0681 0.0958 0.585 cDC L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 8.60e-01 -0.0165 0.0931 0.585 cDC L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 9.89e-08 -0.412 0.0747 0.59 cMono_IL1B L2
ENSG00000112282 MED23 -538093 sc-eQTL 1.30e-02 0.194 0.0773 0.59 cMono_IL1B L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 9.77e-01 -0.00221 0.0764 0.59 cMono_IL1B L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 1.13e-03 -0.266 0.0806 0.59 cMono_S100A L2
ENSG00000112282 MED23 -538093 sc-eQTL 4.07e-01 0.0681 0.0819 0.59 cMono_S100A L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 1.19e-01 -0.125 0.0799 0.59 cMono_S100A L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 3.66e-01 -0.085 0.0937 0.6 gdT L2
ENSG00000112282 MED23 -538093 sc-eQTL 2.10e-01 0.132 0.105 0.6 gdT L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 1.37e-01 0.163 0.109 0.6 gdT L2
ENSG00000164483 SAMD3 724724 sc-eQTL 5.44e-01 0.0509 0.0837 0.6 gdT L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 3.38e-04 -0.298 0.0816 0.591 intMono L2
ENSG00000112282 MED23 -538093 sc-eQTL 1.80e-01 0.121 0.0903 0.591 intMono L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 9.30e-01 0.0078 0.0885 0.591 intMono L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 3.14e-03 -0.229 0.0765 0.59 ncMono L2
ENSG00000112282 MED23 -538093 sc-eQTL 5.59e-01 0.0499 0.0851 0.59 ncMono L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 5.54e-01 0.049 0.0825 0.59 ncMono L2
ENSG00000079819 EPB41L2 26827 sc-eQTL 3.94e-01 0.0815 0.0952 0.596 pDC L2
ENSG00000112282 MED23 -538093 sc-eQTL 5.74e-01 -0.0543 0.0963 0.596 pDC L2
ENSG00000118507 AKAP7 -45318 sc-eQTL 1.59e-01 0.111 0.0782 0.596 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 26827 sc-eQTL 7.30e-03 -0.2 0.0736 0.59 B_Memory LOneK1K
ENSG00000112282 MED23 -538093 sc-eQTL 4.05e-01 -0.0613 0.0735 0.59 B_Memory LOneK1K
ENSG00000118507 AKAP7 -45318 sc-eQTL 4.08e-02 0.152 0.0741 0.59 B_Memory LOneK1K
ENSG00000164483 SAMD3 724724 sc-eQTL 3.83e-01 0.0651 0.0745 0.59 B_Memory LOneK1K
ENSG00000079819 EPB41L2 26827 sc-eQTL 3.72e-06 -0.285 0.0599 0.59 B_Naive LOneK1K
ENSG00000112282 MED23 -538093 sc-eQTL 1.90e-01 0.0912 0.0694 0.59 B_Naive LOneK1K
ENSG00000118507 AKAP7 -45318 sc-eQTL 9.20e-07 0.419 0.0829 0.59 B_Naive LOneK1K
ENSG00000164483 SAMD3 724724 sc-eQTL 1.95e-01 -0.0976 0.0751 0.59 B_Naive LOneK1K
ENSG00000079819 EPB41L2 26827 sc-eQTL 7.91e-10 -0.448 0.0696 0.59 CD14_Mono LOneK1K
ENSG00000112282 MED23 -538093 sc-eQTL 9.39e-03 0.189 0.0722 0.59 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 -45318 sc-eQTL 3.14e-01 -0.0724 0.0718 0.59 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 26827 sc-eQTL 4.27e-04 -0.276 0.0772 0.588 CD16_Mono LOneK1K
ENSG00000112282 MED23 -538093 sc-eQTL 2.11e-01 0.101 0.0805 0.588 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 -45318 sc-eQTL 9.64e-01 -0.00378 0.083 0.588 CD16_Mono LOneK1K
ENSG00000112282 MED23 -538093 sc-eQTL 3.78e-01 0.0556 0.063 0.591 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 -45318 sc-eQTL 5.55e-03 0.191 0.0683 0.591 NK_CD56dim LOneK1K
ENSG00000164483 SAMD3 724724 sc-eQTL 2.38e-01 0.0447 0.0377 0.591 NK_CD56dim LOneK1K
ENSG00000227678 AL355581.1 943970 sc-eQTL 7.30e-01 0.0282 0.0817 0.591 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079819 EPB41L2 26827 eQTL 1.17e-59 -0.328 0.0187 0.0 0.0 0.385
ENSG00000118507 AKAP7 -45318 eQTL 0.000209 0.0779 0.0209 0.0 0.0 0.385

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079819 EPB41L2 26827 1.25e-05 1.38e-05 2.91e-06 9e-06 3.07e-06 6.55e-06 2.04e-05 3.02e-06 1.5e-05 7.31e-06 1.88e-05 7.38e-06 2.71e-05 5.67e-06 4.78e-06 9.28e-06 8.14e-06 1.25e-05 4.95e-06 4.38e-06 8.02e-06 1.36e-05 1.48e-05 5.74e-06 2.58e-05 5.34e-06 7.6e-06 6.87e-06 1.66e-05 1.78e-05 1.04e-05 1.4e-06 2.07e-06 5.41e-06 6.68e-06 4.5e-06 2.56e-06 2.77e-06 3.62e-06 2.71e-06 1.7e-06 1.86e-05 2.35e-06 4.38e-07 1.93e-06 2.67e-06 2.94e-06 1.38e-06 1.1e-06
ENSG00000118507 AKAP7 -45318 9.27e-06 9.82e-06 1.79e-06 6.18e-06 2.38e-06 4.47e-06 1.17e-05 2.14e-06 9.81e-06 5.34e-06 1.3e-05 5.74e-06 1.74e-05 3.66e-06 3.49e-06 6.63e-06 5.31e-06 8.13e-06 3.39e-06 3.14e-06 6.27e-06 1.01e-05 9.43e-06 3.69e-06 1.7e-05 4.43e-06 5.79e-06 4.84e-06 1.23e-05 1.12e-05 6.37e-06 1.04e-06 1.4e-06 3.78e-06 4.88e-06 2.87e-06 1.77e-06 2.11e-06 2.26e-06 1.5e-06 1.36e-06 1.3e-05 1.44e-06 3.24e-07 9.84e-07 1.89e-06 1.84e-06 6.83e-07 5e-07