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Genes within 1Mb (chr6:131081063:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 17741 sc-eQTL 6.16e-01 0.0488 0.097 0.88 B L1
ENSG00000112282 MED23 -547179 sc-eQTL 4.83e-01 0.0747 0.106 0.88 B L1
ENSG00000118507 AKAP7 -54404 sc-eQTL 3.89e-01 0.109 0.126 0.88 B L1
ENSG00000164483 SAMD3 715638 sc-eQTL 3.71e-01 0.0993 0.111 0.88 B L1
ENSG00000079819 EPB41L2 17741 sc-eQTL 6.04e-01 0.0652 0.125 0.88 CD4T L1
ENSG00000112282 MED23 -547179 sc-eQTL 5.77e-01 -0.0454 0.0812 0.88 CD4T L1
ENSG00000118507 AKAP7 -54404 sc-eQTL 8.09e-01 0.0264 0.109 0.88 CD4T L1
ENSG00000164483 SAMD3 715638 sc-eQTL 1.96e-01 0.123 0.0951 0.88 CD4T L1
ENSG00000112282 MED23 -547179 sc-eQTL 4.74e-02 0.198 0.0991 0.88 CD8T L1
ENSG00000118507 AKAP7 -54404 sc-eQTL 3.35e-01 -0.11 0.114 0.88 CD8T L1
ENSG00000164483 SAMD3 715638 sc-eQTL 8.08e-01 -0.0127 0.0523 0.88 CD8T L1
ENSG00000079819 EPB41L2 17741 sc-eQTL 9.12e-01 0.0115 0.104 0.876 DC L1
ENSG00000112282 MED23 -547179 sc-eQTL 3.51e-01 0.125 0.134 0.876 DC L1
ENSG00000118507 AKAP7 -54404 sc-eQTL 5.96e-01 -0.0698 0.132 0.876 DC L1
ENSG00000079819 EPB41L2 17741 sc-eQTL 3.52e-01 0.109 0.117 0.88 Mono L1
ENSG00000112282 MED23 -547179 sc-eQTL 4.44e-01 -0.0871 0.114 0.88 Mono L1
ENSG00000118507 AKAP7 -54404 sc-eQTL 2.16e-01 0.139 0.112 0.88 Mono L1
ENSG00000112282 MED23 -547179 sc-eQTL 5.83e-01 -0.0528 0.096 0.88 NK L1
ENSG00000118507 AKAP7 -54404 sc-eQTL 5.02e-01 0.0772 0.115 0.88 NK L1
ENSG00000164483 SAMD3 715638 sc-eQTL 2.46e-01 -0.0745 0.064 0.88 NK L1
ENSG00000227678 AL355581.1 934884 sc-eQTL 1.39e-01 -0.193 0.13 0.88 NK L1
ENSG00000079819 EPB41L2 17741 sc-eQTL 9.71e-01 -0.00427 0.117 0.88 Other_T L1
ENSG00000112282 MED23 -547179 sc-eQTL 1.17e-01 0.208 0.132 0.88 Other_T L1
ENSG00000118507 AKAP7 -54404 sc-eQTL 1.73e-01 -0.158 0.115 0.88 Other_T L1
ENSG00000164483 SAMD3 715638 sc-eQTL 7.02e-01 -0.0237 0.0619 0.88 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 17741 sc-eQTL 2.42e-01 0.147 0.125 0.88 B_Activated L2
ENSG00000112282 MED23 -547179 sc-eQTL 2.14e-01 -0.183 0.147 0.88 B_Activated L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 2.99e-01 0.153 0.147 0.88 B_Activated L2
ENSG00000164483 SAMD3 715638 sc-eQTL 2.60e-01 0.113 0.1 0.88 B_Activated L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 1.99e-02 0.313 0.133 0.882 B_Intermediate L2
ENSG00000112282 MED23 -547179 sc-eQTL 3.21e-02 0.278 0.129 0.882 B_Intermediate L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 8.15e-01 -0.031 0.132 0.882 B_Intermediate L2
ENSG00000164483 SAMD3 715638 sc-eQTL 2.23e-01 0.136 0.111 0.882 B_Intermediate L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 7.12e-01 0.0461 0.125 0.881 B_Memory L2
ENSG00000112282 MED23 -547179 sc-eQTL 6.82e-01 -0.0537 0.131 0.881 B_Memory L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 1.05e-02 0.347 0.134 0.881 B_Memory L2
ENSG00000164483 SAMD3 715638 sc-eQTL 4.20e-01 -0.1 0.124 0.881 B_Memory L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 8.07e-01 -0.0265 0.108 0.88 B_Naive1 L2
ENSG00000112282 MED23 -547179 sc-eQTL 5.73e-01 -0.0651 0.115 0.88 B_Naive1 L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 8.10e-01 -0.0348 0.144 0.88 B_Naive1 L2
ENSG00000164483 SAMD3 715638 sc-eQTL 4.99e-01 0.0763 0.113 0.88 B_Naive1 L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 4.00e-01 -0.104 0.123 0.882 B_Naive2 L2
ENSG00000112282 MED23 -547179 sc-eQTL 6.24e-01 -0.0688 0.14 0.882 B_Naive2 L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 9.50e-01 0.00925 0.147 0.882 B_Naive2 L2
ENSG00000164483 SAMD3 715638 sc-eQTL 6.00e-01 -0.0502 0.0956 0.882 B_Naive2 L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 5.97e-01 -0.0596 0.113 0.882 CD4_CTL L2
ENSG00000112282 MED23 -547179 sc-eQTL 1.26e-01 -0.221 0.144 0.882 CD4_CTL L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 2.61e-01 -0.156 0.138 0.882 CD4_CTL L2
ENSG00000164483 SAMD3 715638 sc-eQTL 9.53e-01 0.00539 0.091 0.882 CD4_CTL L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 8.38e-01 0.0266 0.13 0.88 CD4_Naive L2
ENSG00000112282 MED23 -547179 sc-eQTL 5.44e-01 -0.057 0.0939 0.88 CD4_Naive L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 6.73e-01 0.0519 0.123 0.88 CD4_Naive L2
ENSG00000164483 SAMD3 715638 sc-eQTL 3.88e-01 0.0977 0.113 0.88 CD4_Naive L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 9.78e-01 -0.00362 0.134 0.88 CD4_TCM L2
ENSG00000112282 MED23 -547179 sc-eQTL 1.34e-01 -0.154 0.102 0.88 CD4_TCM L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 7.07e-01 0.0448 0.119 0.88 CD4_TCM L2
ENSG00000164483 SAMD3 715638 sc-eQTL 2.89e-01 0.115 0.108 0.88 CD4_TCM L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 4.76e-01 0.101 0.141 0.88 CD4_TEM L2
ENSG00000112282 MED23 -547179 sc-eQTL 1.53e-01 0.186 0.13 0.88 CD4_TEM L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 7.71e-01 -0.0418 0.143 0.88 CD4_TEM L2
ENSG00000164483 SAMD3 715638 sc-eQTL 5.85e-01 0.0499 0.0912 0.88 CD4_TEM L2
ENSG00000112282 MED23 -547179 sc-eQTL 8.43e-01 0.0238 0.12 0.88 CD8_CTL L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 2.51e-01 -0.154 0.133 0.88 CD8_CTL L2
ENSG00000164483 SAMD3 715638 sc-eQTL 1.56e-01 -0.121 0.0847 0.88 CD8_CTL L2
ENSG00000112282 MED23 -547179 sc-eQTL 8.31e-01 0.0241 0.113 0.88 CD8_Naive L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 5.90e-01 -0.0689 0.128 0.88 CD8_Naive L2
ENSG00000164483 SAMD3 715638 sc-eQTL 3.57e-01 -0.104 0.113 0.88 CD8_Naive L2
ENSG00000112282 MED23 -547179 sc-eQTL 3.87e-01 0.122 0.14 0.882 CD8_TCM L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 1.14e-01 0.238 0.15 0.882 CD8_TCM L2
ENSG00000164483 SAMD3 715638 sc-eQTL 8.88e-01 0.0182 0.129 0.882 CD8_TCM L2
ENSG00000112282 MED23 -547179 sc-eQTL 6.72e-02 0.262 0.142 0.886 CD8_TEM L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 8.96e-01 0.0191 0.146 0.886 CD8_TEM L2
ENSG00000164483 SAMD3 715638 sc-eQTL 3.85e-01 0.0905 0.104 0.886 CD8_TEM L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 4.33e-01 -0.102 0.13 0.879 MAIT L2
ENSG00000112282 MED23 -547179 sc-eQTL 1.84e-01 0.187 0.141 0.879 MAIT L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 9.26e-01 -0.013 0.14 0.879 MAIT L2
ENSG00000164483 SAMD3 715638 sc-eQTL 6.64e-01 0.0363 0.0833 0.879 MAIT L2
ENSG00000112282 MED23 -547179 sc-eQTL 2.87e-01 0.154 0.144 0.878 NK_CD56bright L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 5.44e-01 0.0854 0.14 0.878 NK_CD56bright L2
ENSG00000164483 SAMD3 715638 sc-eQTL 6.39e-01 -0.0522 0.111 0.878 NK_CD56bright L2
ENSG00000227678 AL355581.1 934884 sc-eQTL 2.33e-02 -0.291 0.127 0.878 NK_CD56bright L2
ENSG00000112282 MED23 -547179 sc-eQTL 8.59e-02 -0.197 0.114 0.879 NK_CD56dim L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 6.39e-01 -0.0573 0.122 0.879 NK_CD56dim L2
ENSG00000164483 SAMD3 715638 sc-eQTL 2.17e-01 -0.0823 0.0664 0.879 NK_CD56dim L2
ENSG00000227678 AL355581.1 934884 sc-eQTL 3.37e-01 -0.129 0.134 0.879 NK_CD56dim L2
ENSG00000112282 MED23 -547179 sc-eQTL 1.09e-01 0.22 0.136 0.874 NK_HLA L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 3.35e-01 -0.137 0.142 0.874 NK_HLA L2
ENSG00000164483 SAMD3 715638 sc-eQTL 6.20e-01 -0.0581 0.117 0.874 NK_HLA L2
ENSG00000227678 AL355581.1 934884 sc-eQTL 8.34e-02 -0.224 0.129 0.874 NK_HLA L2
ENSG00000112282 MED23 -547179 sc-eQTL 3.00e-01 0.13 0.125 0.879 NK_cytokine L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 2.09e-01 0.159 0.126 0.879 NK_cytokine L2
ENSG00000164483 SAMD3 715638 sc-eQTL 8.50e-02 -0.136 0.0786 0.879 NK_cytokine L2
ENSG00000227678 AL355581.1 934884 sc-eQTL 6.09e-01 -0.0701 0.137 0.879 NK_cytokine L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 2.03e-01 0.23 0.179 0.874 PB L2
ENSG00000112282 MED23 -547179 sc-eQTL 4.49e-01 -0.129 0.17 0.874 PB L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 1.70e-01 -0.227 0.165 0.874 PB L2
ENSG00000164483 SAMD3 715638 sc-eQTL 5.25e-01 0.1 0.157 0.874 PB L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 6.85e-01 0.0499 0.123 0.88 Pro_T L2
ENSG00000112282 MED23 -547179 sc-eQTL 8.00e-01 -0.0363 0.143 0.88 Pro_T L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 1.76e-01 -0.166 0.122 0.88 Pro_T L2
ENSG00000164483 SAMD3 715638 sc-eQTL 9.56e-01 0.00438 0.0792 0.88 Pro_T L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 1.02e-01 0.22 0.134 0.88 Treg L2
ENSG00000112282 MED23 -547179 sc-eQTL 2.70e-01 0.153 0.139 0.88 Treg L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 4.05e-02 -0.245 0.119 0.88 Treg L2
ENSG00000164483 SAMD3 715638 sc-eQTL 5.34e-01 0.0719 0.115 0.88 Treg L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 7.36e-01 0.039 0.115 0.873 cDC L2
ENSG00000112282 MED23 -547179 sc-eQTL 9.88e-01 -0.00217 0.148 0.873 cDC L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 2.98e-01 -0.15 0.144 0.873 cDC L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 6.00e-01 0.0671 0.128 0.88 cMono_IL1B L2
ENSG00000112282 MED23 -547179 sc-eQTL 5.83e-01 -0.0689 0.125 0.88 cMono_IL1B L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 3.17e-01 0.122 0.122 0.88 cMono_IL1B L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 9.96e-02 0.216 0.131 0.88 cMono_S100A L2
ENSG00000112282 MED23 -547179 sc-eQTL 7.68e-01 0.0386 0.131 0.88 cMono_S100A L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 4.49e-01 0.097 0.128 0.88 cMono_S100A L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 8.49e-01 -0.0276 0.145 0.882 gdT L2
ENSG00000112282 MED23 -547179 sc-eQTL 7.74e-01 -0.0467 0.163 0.882 gdT L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 3.86e-01 -0.147 0.169 0.882 gdT L2
ENSG00000164483 SAMD3 715638 sc-eQTL 8.28e-01 -0.0281 0.129 0.882 gdT L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 9.43e-01 0.00963 0.134 0.878 intMono L2
ENSG00000112282 MED23 -547179 sc-eQTL 2.88e-01 -0.153 0.143 0.878 intMono L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 2.49e-01 0.162 0.14 0.878 intMono L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 7.47e-01 -0.0406 0.126 0.878 ncMono L2
ENSG00000112282 MED23 -547179 sc-eQTL 7.47e-01 -0.0443 0.137 0.878 ncMono L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 6.33e-01 0.0636 0.133 0.878 ncMono L2
ENSG00000079819 EPB41L2 17741 sc-eQTL 8.65e-01 -0.0263 0.154 0.881 pDC L2
ENSG00000112282 MED23 -547179 sc-eQTL 4.14e-01 0.128 0.156 0.881 pDC L2
ENSG00000118507 AKAP7 -54404 sc-eQTL 9.57e-01 0.00682 0.127 0.881 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 17741 sc-eQTL 4.53e-02 0.242 0.12 0.88 B_Memory LOneK1K
ENSG00000112282 MED23 -547179 sc-eQTL 1.02e-01 0.194 0.118 0.88 B_Memory LOneK1K
ENSG00000118507 AKAP7 -54404 sc-eQTL 2.29e-01 0.145 0.12 0.88 B_Memory LOneK1K
ENSG00000164483 SAMD3 715638 sc-eQTL 8.79e-01 0.0183 0.121 0.88 B_Memory LOneK1K
ENSG00000079819 EPB41L2 17741 sc-eQTL 4.58e-01 -0.0762 0.103 0.88 B_Naive LOneK1K
ENSG00000112282 MED23 -547179 sc-eQTL 6.28e-01 -0.0551 0.114 0.88 B_Naive LOneK1K
ENSG00000118507 AKAP7 -54404 sc-eQTL 7.20e-01 0.0515 0.143 0.88 B_Naive LOneK1K
ENSG00000164483 SAMD3 715638 sc-eQTL 3.16e-01 0.123 0.123 0.88 B_Naive LOneK1K
ENSG00000079819 EPB41L2 17741 sc-eQTL 7.61e-02 0.216 0.121 0.88 CD14_Mono LOneK1K
ENSG00000112282 MED23 -547179 sc-eQTL 9.10e-01 -0.0133 0.118 0.88 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 -54404 sc-eQTL 2.40e-01 0.135 0.115 0.88 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 17741 sc-eQTL 7.30e-01 -0.0448 0.129 0.879 CD16_Mono LOneK1K
ENSG00000112282 MED23 -547179 sc-eQTL 4.21e-01 -0.106 0.132 0.879 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 -54404 sc-eQTL 5.60e-01 0.0788 0.135 0.879 CD16_Mono LOneK1K
ENSG00000112282 MED23 -547179 sc-eQTL 5.91e-01 -0.0553 0.103 0.879 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 -54404 sc-eQTL 6.05e-01 0.0587 0.113 0.879 NK_CD56dim LOneK1K
ENSG00000164483 SAMD3 715638 sc-eQTL 2.51e-01 -0.0708 0.0614 0.879 NK_CD56dim LOneK1K
ENSG00000227678 AL355581.1 934884 sc-eQTL 3.88e-01 -0.115 0.133 0.879 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079819 EPB41L2 17741 eQTL 5.12e-06 0.137 0.03 0.00127 0.0 0.132
ENSG00000118507 AKAP7 -54404 eQTL 0.0204 0.0687 0.0296 0.0 0.0 0.132

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina