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Genes within 1Mb (chr6:131080717:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 17395 sc-eQTL 3.65e-03 -0.174 0.0593 0.34 B L1
ENSG00000112282 MED23 -547525 sc-eQTL 7.69e-01 -0.0195 0.0663 0.34 B L1
ENSG00000118507 AKAP7 -54750 sc-eQTL 1.05e-03 0.254 0.0766 0.34 B L1
ENSG00000164483 SAMD3 715292 sc-eQTL 4.51e-01 0.0521 0.0691 0.34 B L1
ENSG00000079819 EPB41L2 17395 sc-eQTL 2.71e-02 -0.176 0.0792 0.34 CD4T L1
ENSG00000112282 MED23 -547525 sc-eQTL 5.04e-01 0.0347 0.0518 0.34 CD4T L1
ENSG00000118507 AKAP7 -54750 sc-eQTL 4.32e-01 0.0547 0.0695 0.34 CD4T L1
ENSG00000164483 SAMD3 715292 sc-eQTL 1.05e-01 0.0985 0.0605 0.34 CD4T L1
ENSG00000112282 MED23 -547525 sc-eQTL 4.37e-01 0.0493 0.0633 0.34 CD8T L1
ENSG00000118507 AKAP7 -54750 sc-eQTL 8.82e-01 0.0107 0.0722 0.34 CD8T L1
ENSG00000164483 SAMD3 715292 sc-eQTL 8.74e-02 0.0565 0.0329 0.34 CD8T L1
ENSG00000079819 EPB41L2 17395 sc-eQTL 1.61e-06 -0.316 0.0639 0.336 DC L1
ENSG00000112282 MED23 -547525 sc-eQTL 7.37e-01 -0.0292 0.0869 0.336 DC L1
ENSG00000118507 AKAP7 -54750 sc-eQTL 4.78e-02 -0.169 0.0847 0.336 DC L1
ENSG00000079819 EPB41L2 17395 sc-eQTL 1.25e-08 -0.405 0.0684 0.34 Mono L1
ENSG00000112282 MED23 -547525 sc-eQTL 2.28e-02 0.163 0.0709 0.34 Mono L1
ENSG00000118507 AKAP7 -54750 sc-eQTL 7.37e-02 -0.127 0.0707 0.34 Mono L1
ENSG00000112282 MED23 -547525 sc-eQTL 7.82e-01 0.0168 0.0607 0.339 NK L1
ENSG00000118507 AKAP7 -54750 sc-eQTL 7.87e-01 0.0196 0.0726 0.339 NK L1
ENSG00000164483 SAMD3 715292 sc-eQTL 9.16e-01 -0.0043 0.0405 0.339 NK L1
ENSG00000227678 AL355581.1 934538 sc-eQTL 7.36e-01 -0.0279 0.0826 0.339 NK L1
ENSG00000079819 EPB41L2 17395 sc-eQTL 8.37e-01 -0.0154 0.0744 0.34 Other_T L1
ENSG00000112282 MED23 -547525 sc-eQTL 7.27e-01 0.0293 0.084 0.34 Other_T L1
ENSG00000118507 AKAP7 -54750 sc-eQTL 7.05e-02 0.132 0.0729 0.34 Other_T L1
ENSG00000164483 SAMD3 715292 sc-eQTL 9.69e-01 -0.0015 0.0392 0.34 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 17395 sc-eQTL 3.87e-01 0.0704 0.0811 0.339 B_Activated L2
ENSG00000112282 MED23 -547525 sc-eQTL 5.85e-01 -0.0524 0.0957 0.339 B_Activated L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 9.38e-01 0.00741 0.0955 0.339 B_Activated L2
ENSG00000164483 SAMD3 715292 sc-eQTL 4.84e-01 -0.0456 0.0651 0.339 B_Activated L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 6.00e-03 -0.23 0.0828 0.341 B_Intermediate L2
ENSG00000112282 MED23 -547525 sc-eQTL 7.04e-01 -0.0309 0.0811 0.341 B_Intermediate L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 1.42e-01 0.121 0.0821 0.341 B_Intermediate L2
ENSG00000164483 SAMD3 715292 sc-eQTL 8.82e-01 0.0103 0.0694 0.341 B_Intermediate L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 4.71e-01 -0.0575 0.0796 0.338 B_Memory L2
ENSG00000112282 MED23 -547525 sc-eQTL 6.87e-01 -0.0336 0.0835 0.338 B_Memory L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 5.33e-01 0.0543 0.0869 0.338 B_Memory L2
ENSG00000164483 SAMD3 715292 sc-eQTL 9.73e-01 -0.00271 0.0792 0.338 B_Memory L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 2.23e-03 -0.206 0.0666 0.34 B_Naive1 L2
ENSG00000112282 MED23 -547525 sc-eQTL 5.59e-01 -0.0424 0.0724 0.34 B_Naive1 L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 9.55e-04 0.296 0.0884 0.34 B_Naive1 L2
ENSG00000164483 SAMD3 715292 sc-eQTL 6.64e-01 -0.0308 0.0709 0.34 B_Naive1 L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 2.76e-01 -0.0843 0.0772 0.339 B_Naive2 L2
ENSG00000112282 MED23 -547525 sc-eQTL 6.18e-01 0.0441 0.0883 0.339 B_Naive2 L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 8.95e-02 0.157 0.0922 0.339 B_Naive2 L2
ENSG00000164483 SAMD3 715292 sc-eQTL 7.23e-01 -0.0214 0.0602 0.339 B_Naive2 L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 3.45e-03 -0.207 0.0698 0.348 CD4_CTL L2
ENSG00000112282 MED23 -547525 sc-eQTL 9.18e-01 0.00947 0.0915 0.348 CD4_CTL L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 3.19e-01 -0.0873 0.0875 0.348 CD4_CTL L2
ENSG00000164483 SAMD3 715292 sc-eQTL 5.14e-01 0.0376 0.0576 0.348 CD4_CTL L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 8.32e-02 -0.143 0.0822 0.34 CD4_Naive L2
ENSG00000112282 MED23 -547525 sc-eQTL 5.89e-01 0.0325 0.06 0.34 CD4_Naive L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 3.24e-01 0.0774 0.0783 0.34 CD4_Naive L2
ENSG00000164483 SAMD3 715292 sc-eQTL 1.89e-01 0.0948 0.072 0.34 CD4_Naive L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 6.87e-02 -0.153 0.0837 0.34 CD4_TCM L2
ENSG00000112282 MED23 -547525 sc-eQTL 7.08e-01 0.0243 0.0647 0.34 CD4_TCM L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 9.36e-01 0.00602 0.0752 0.34 CD4_TCM L2
ENSG00000164483 SAMD3 715292 sc-eQTL 6.91e-02 0.124 0.068 0.34 CD4_TCM L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 3.29e-01 0.0866 0.0885 0.34 CD4_TEM L2
ENSG00000112282 MED23 -547525 sc-eQTL 7.92e-01 0.0215 0.0817 0.34 CD4_TEM L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 7.36e-01 0.0303 0.0897 0.34 CD4_TEM L2
ENSG00000164483 SAMD3 715292 sc-eQTL 2.48e-01 0.066 0.0569 0.34 CD4_TEM L2
ENSG00000112282 MED23 -547525 sc-eQTL 2.08e-01 0.0983 0.0778 0.34 CD8_CTL L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 5.35e-01 0.0542 0.0873 0.34 CD8_CTL L2
ENSG00000164483 SAMD3 715292 sc-eQTL 8.05e-01 0.0137 0.0556 0.34 CD8_CTL L2
ENSG00000112282 MED23 -547525 sc-eQTL 8.79e-01 0.011 0.0721 0.34 CD8_Naive L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 8.28e-01 0.0177 0.0814 0.34 CD8_Naive L2
ENSG00000164483 SAMD3 715292 sc-eQTL 5.65e-01 0.0416 0.0721 0.34 CD8_Naive L2
ENSG00000112282 MED23 -547525 sc-eQTL 4.14e-01 -0.0716 0.0875 0.347 CD8_TCM L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 5.63e-01 0.0544 0.094 0.347 CD8_TCM L2
ENSG00000164483 SAMD3 715292 sc-eQTL 3.40e-01 0.0765 0.08 0.347 CD8_TCM L2
ENSG00000112282 MED23 -547525 sc-eQTL 1.04e-02 0.228 0.0883 0.34 CD8_TEM L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 7.09e-01 0.0341 0.0912 0.34 CD8_TEM L2
ENSG00000164483 SAMD3 715292 sc-eQTL 3.00e-01 0.0675 0.065 0.34 CD8_TEM L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 5.07e-01 -0.0543 0.0817 0.34 MAIT L2
ENSG00000112282 MED23 -547525 sc-eQTL 3.39e-01 0.0853 0.0889 0.34 MAIT L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 2.51e-01 0.101 0.0878 0.34 MAIT L2
ENSG00000164483 SAMD3 715292 sc-eQTL 7.05e-01 0.0199 0.0525 0.34 MAIT L2
ENSG00000112282 MED23 -547525 sc-eQTL 5.35e-02 0.178 0.0917 0.342 NK_CD56bright L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 6.80e-01 -0.0371 0.0898 0.342 NK_CD56bright L2
ENSG00000164483 SAMD3 715292 sc-eQTL 4.20e-01 -0.0574 0.071 0.342 NK_CD56bright L2
ENSG00000227678 AL355581.1 934538 sc-eQTL 9.59e-01 0.00427 0.0824 0.342 NK_CD56bright L2
ENSG00000112282 MED23 -547525 sc-eQTL 1.82e-01 -0.0972 0.0727 0.341 NK_CD56dim L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 2.36e-01 0.0918 0.0772 0.341 NK_CD56dim L2
ENSG00000164483 SAMD3 715292 sc-eQTL 9.95e-01 -0.000289 0.0423 0.341 NK_CD56dim L2
ENSG00000227678 AL355581.1 934538 sc-eQTL 9.24e-01 0.00817 0.0855 0.341 NK_CD56dim L2
ENSG00000112282 MED23 -547525 sc-eQTL 8.12e-01 -0.0212 0.0888 0.345 NK_HLA L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 1.02e-01 0.15 0.0914 0.345 NK_HLA L2
ENSG00000164483 SAMD3 715292 sc-eQTL 2.81e-01 0.0817 0.0755 0.345 NK_HLA L2
ENSG00000227678 AL355581.1 934538 sc-eQTL 6.85e-01 0.034 0.0838 0.345 NK_HLA L2
ENSG00000112282 MED23 -547525 sc-eQTL 1.42e-01 0.118 0.08 0.341 NK_cytokine L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 5.81e-01 0.0448 0.0811 0.341 NK_cytokine L2
ENSG00000164483 SAMD3 715292 sc-eQTL 5.09e-01 0.0335 0.0506 0.341 NK_cytokine L2
ENSG00000227678 AL355581.1 934538 sc-eQTL 7.66e-01 0.0261 0.0876 0.341 NK_cytokine L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 2.34e-01 0.139 0.116 0.322 PB L2
ENSG00000112282 MED23 -547525 sc-eQTL 6.83e-01 -0.0451 0.11 0.322 PB L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 1.96e-01 -0.138 0.107 0.322 PB L2
ENSG00000164483 SAMD3 715292 sc-eQTL 5.38e-01 0.0627 0.102 0.322 PB L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 7.68e-01 0.0229 0.0776 0.341 Pro_T L2
ENSG00000112282 MED23 -547525 sc-eQTL 4.43e-01 -0.0693 0.0901 0.341 Pro_T L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 3.69e-01 0.0695 0.0772 0.341 Pro_T L2
ENSG00000164483 SAMD3 715292 sc-eQTL 8.35e-02 0.0863 0.0496 0.341 Pro_T L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 4.26e-01 -0.0689 0.0864 0.34 Treg L2
ENSG00000112282 MED23 -547525 sc-eQTL 5.24e-01 -0.0568 0.0889 0.34 Treg L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 5.00e-02 -0.15 0.0761 0.34 Treg L2
ENSG00000164483 SAMD3 715292 sc-eQTL 9.42e-02 -0.123 0.0734 0.34 Treg L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 1.53e-06 -0.357 0.0717 0.339 cDC L2
ENSG00000112282 MED23 -547525 sc-eQTL 5.76e-01 0.055 0.0982 0.339 cDC L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 1.05e-01 -0.154 0.0947 0.339 cDC L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 4.81e-07 -0.392 0.0755 0.34 cMono_IL1B L2
ENSG00000112282 MED23 -547525 sc-eQTL 3.10e-01 0.08 0.0786 0.34 cMono_IL1B L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 2.08e-01 -0.0965 0.0764 0.34 cMono_IL1B L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 3.62e-02 -0.175 0.0829 0.34 cMono_S100A L2
ENSG00000112282 MED23 -547525 sc-eQTL 5.02e-02 0.162 0.0824 0.34 cMono_S100A L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 9.99e-02 -0.134 0.0809 0.34 cMono_S100A L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 4.84e-01 -0.0671 0.0957 0.358 gdT L2
ENSG00000112282 MED23 -547525 sc-eQTL 8.49e-01 -0.0206 0.108 0.358 gdT L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 9.74e-01 0.00368 0.112 0.358 gdT L2
ENSG00000164483 SAMD3 715292 sc-eQTL 6.90e-01 0.0341 0.0854 0.358 gdT L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 5.94e-05 -0.34 0.0828 0.342 intMono L2
ENSG00000112282 MED23 -547525 sc-eQTL 4.12e-01 0.0763 0.0927 0.342 intMono L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 8.58e-01 0.0162 0.0906 0.342 intMono L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 1.66e-03 -0.253 0.0793 0.335 ncMono L2
ENSG00000112282 MED23 -547525 sc-eQTL 1.21e-01 0.137 0.0881 0.335 ncMono L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 6.08e-01 0.0441 0.0859 0.335 ncMono L2
ENSG00000079819 EPB41L2 17395 sc-eQTL 9.48e-01 -0.00651 0.1 0.342 pDC L2
ENSG00000112282 MED23 -547525 sc-eQTL 7.01e-01 -0.0391 0.101 0.342 pDC L2
ENSG00000118507 AKAP7 -54750 sc-eQTL 7.85e-01 0.0226 0.0828 0.342 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 17395 sc-eQTL 5.64e-02 -0.145 0.0754 0.34 B_Memory LOneK1K
ENSG00000112282 MED23 -547525 sc-eQTL 9.31e-01 0.00649 0.0747 0.34 B_Memory LOneK1K
ENSG00000118507 AKAP7 -54750 sc-eQTL 3.28e-01 0.0742 0.0758 0.34 B_Memory LOneK1K
ENSG00000164483 SAMD3 715292 sc-eQTL 8.55e-01 -0.0139 0.0757 0.34 B_Memory LOneK1K
ENSG00000079819 EPB41L2 17395 sc-eQTL 3.05e-03 -0.189 0.0631 0.34 B_Naive LOneK1K
ENSG00000112282 MED23 -547525 sc-eQTL 8.24e-01 -0.0158 0.0713 0.34 B_Naive LOneK1K
ENSG00000118507 AKAP7 -54750 sc-eQTL 3.64e-04 0.316 0.0871 0.34 B_Naive LOneK1K
ENSG00000164483 SAMD3 715292 sc-eQTL 5.73e-01 -0.0435 0.077 0.34 B_Naive LOneK1K
ENSG00000079819 EPB41L2 17395 sc-eQTL 1.82e-07 -0.388 0.072 0.34 CD14_Mono LOneK1K
ENSG00000112282 MED23 -547525 sc-eQTL 5.25e-02 0.143 0.0733 0.34 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 -54750 sc-eQTL 8.14e-02 -0.126 0.0721 0.34 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 17395 sc-eQTL 2.81e-05 -0.341 0.0797 0.336 CD16_Mono LOneK1K
ENSG00000112282 MED23 -547525 sc-eQTL 3.51e-01 0.0788 0.0843 0.336 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 -54750 sc-eQTL 5.54e-01 -0.0514 0.0866 0.336 CD16_Mono LOneK1K
ENSG00000112282 MED23 -547525 sc-eQTL 5.80e-01 -0.0359 0.0646 0.341 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 -54750 sc-eQTL 3.35e-01 0.0688 0.0712 0.341 NK_CD56dim LOneK1K
ENSG00000164483 SAMD3 715292 sc-eQTL 6.48e-01 0.0178 0.0388 0.341 NK_CD56dim LOneK1K
ENSG00000227678 AL355581.1 934538 sc-eQTL 9.96e-01 0.000378 0.0838 0.341 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079819 EPB41L2 17395 eQTL 4.66e-35 -0.262 0.0204 0.0 0.0 0.332

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079819 EPB41L2 17395 1.69e-05 1.86e-05 3.02e-06 9.8e-06 3.03e-06 7.4e-06 2.27e-05 3.36e-06 1.67e-05 8.77e-06 2.26e-05 8.01e-06 3.13e-05 7.62e-06 5.22e-06 1.03e-05 8.8e-06 1.41e-05 4.42e-06 4.14e-06 8.55e-06 1.84e-05 1.77e-05 4.98e-06 2.71e-05 5.41e-06 7.98e-06 7.72e-06 1.69e-05 1.5e-05 1.2e-05 1.03e-06 1.51e-06 4.26e-06 7.16e-06 3.86e-06 1.72e-06 2.51e-06 2.73e-06 2.03e-06 1.12e-06 2.65e-05 2.67e-06 1.47e-07 1.37e-06 2.61e-06 2.91e-06 8.94e-07 6.24e-07