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Genes within 1Mb (chr6:131033118:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 -30204 sc-eQTL 1.55e-02 0.139 0.0568 0.56 B L1
ENSG00000112282 MED23 -595124 sc-eQTL 4.79e-01 0.0447 0.0631 0.56 B L1
ENSG00000118507 AKAP7 -102349 sc-eQTL 1.84e-02 -0.175 0.0738 0.56 B L1
ENSG00000164483 SAMD3 667693 sc-eQTL 9.12e-01 0.00729 0.0658 0.56 B L1
ENSG00000079819 EPB41L2 -30204 sc-eQTL 8.39e-03 0.199 0.0746 0.56 CD4T L1
ENSG00000112282 MED23 -595124 sc-eQTL 4.55e-01 -0.0367 0.0491 0.56 CD4T L1
ENSG00000118507 AKAP7 -102349 sc-eQTL 6.01e-01 -0.0345 0.0659 0.56 CD4T L1
ENSG00000164483 SAMD3 667693 sc-eQTL 9.54e-01 -0.00334 0.0577 0.56 CD4T L1
ENSG00000112282 MED23 -595124 sc-eQTL 5.51e-01 0.0363 0.0608 0.56 CD8T L1
ENSG00000118507 AKAP7 -102349 sc-eQTL 7.09e-01 -0.0259 0.0692 0.56 CD8T L1
ENSG00000164483 SAMD3 667693 sc-eQTL 1.79e-01 -0.0427 0.0316 0.56 CD8T L1
ENSG00000079819 EPB41L2 -30204 sc-eQTL 1.46e-05 0.271 0.061 0.561 DC L1
ENSG00000112282 MED23 -595124 sc-eQTL 2.83e-01 0.0882 0.0819 0.561 DC L1
ENSG00000118507 AKAP7 -102349 sc-eQTL 2.59e-01 0.0912 0.0806 0.561 DC L1
ENSG00000079819 EPB41L2 -30204 sc-eQTL 4.70e-10 0.419 0.064 0.56 Mono L1
ENSG00000112282 MED23 -595124 sc-eQTL 2.35e-02 -0.154 0.0674 0.56 Mono L1
ENSG00000118507 AKAP7 -102349 sc-eQTL 3.71e-02 0.141 0.067 0.56 Mono L1
ENSG00000112282 MED23 -595124 sc-eQTL 3.63e-01 -0.0527 0.0578 0.56 NK L1
ENSG00000118507 AKAP7 -102349 sc-eQTL 4.84e-01 0.0485 0.0692 0.56 NK L1
ENSG00000164483 SAMD3 667693 sc-eQTL 4.72e-01 -0.0278 0.0386 0.56 NK L1
ENSG00000227678 AL355581.1 886939 sc-eQTL 5.42e-01 -0.0481 0.0787 0.56 NK L1
ENSG00000079819 EPB41L2 -30204 sc-eQTL 6.93e-01 -0.0279 0.0704 0.56 Other_T L1
ENSG00000112282 MED23 -595124 sc-eQTL 3.21e-01 0.079 0.0794 0.56 Other_T L1
ENSG00000118507 AKAP7 -102349 sc-eQTL 1.90e-02 -0.162 0.0686 0.56 Other_T L1
ENSG00000164483 SAMD3 667693 sc-eQTL 9.61e-01 -0.00181 0.0371 0.56 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 -30204 sc-eQTL 6.65e-01 -0.033 0.0761 0.559 B_Activated L2
ENSG00000112282 MED23 -595124 sc-eQTL 4.12e-01 -0.0737 0.0896 0.559 B_Activated L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 5.45e-01 0.0542 0.0894 0.559 B_Activated L2
ENSG00000164483 SAMD3 667693 sc-eQTL 2.86e-01 0.0651 0.0609 0.559 B_Activated L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 1.03e-03 0.262 0.0785 0.56 B_Intermediate L2
ENSG00000112282 MED23 -595124 sc-eQTL 9.04e-02 0.131 0.0771 0.56 B_Intermediate L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 4.06e-01 -0.0655 0.0787 0.56 B_Intermediate L2
ENSG00000164483 SAMD3 667693 sc-eQTL 6.51e-01 0.03 0.0664 0.56 B_Intermediate L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 6.33e-01 0.0364 0.076 0.562 B_Memory L2
ENSG00000112282 MED23 -595124 sc-eQTL 7.55e-01 0.0249 0.0797 0.562 B_Memory L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 2.70e-01 0.0915 0.0827 0.562 B_Memory L2
ENSG00000164483 SAMD3 667693 sc-eQTL 8.28e-01 -0.0164 0.0756 0.562 B_Memory L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 1.78e-02 0.153 0.064 0.56 B_Naive1 L2
ENSG00000112282 MED23 -595124 sc-eQTL 7.46e-01 0.0223 0.069 0.56 B_Naive1 L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 9.09e-04 -0.283 0.0841 0.56 B_Naive1 L2
ENSG00000164483 SAMD3 667693 sc-eQTL 4.82e-01 0.0474 0.0674 0.56 B_Naive1 L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 5.98e-01 0.0391 0.0741 0.562 B_Naive2 L2
ENSG00000112282 MED23 -595124 sc-eQTL 4.71e-01 -0.061 0.0844 0.562 B_Naive2 L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 2.11e-01 -0.111 0.0885 0.562 B_Naive2 L2
ENSG00000164483 SAMD3 667693 sc-eQTL 4.38e-01 0.0447 0.0575 0.562 B_Naive2 L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 2.16e-02 0.158 0.0684 0.555 CD4_CTL L2
ENSG00000112282 MED23 -595124 sc-eQTL 1.30e-01 -0.134 0.0883 0.555 CD4_CTL L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 7.66e-01 0.0254 0.0851 0.555 CD4_CTL L2
ENSG00000164483 SAMD3 667693 sc-eQTL 3.78e-01 -0.0494 0.0559 0.555 CD4_CTL L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 4.75e-02 0.154 0.0774 0.56 CD4_Naive L2
ENSG00000112282 MED23 -595124 sc-eQTL 4.56e-01 -0.0422 0.0565 0.56 CD4_Naive L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 7.14e-01 -0.0272 0.074 0.56 CD4_Naive L2
ENSG00000164483 SAMD3 667693 sc-eQTL 9.64e-01 -0.00312 0.0682 0.56 CD4_Naive L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 8.60e-02 0.137 0.0796 0.56 CD4_TCM L2
ENSG00000112282 MED23 -595124 sc-eQTL 2.81e-01 -0.0664 0.0614 0.56 CD4_TCM L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 8.42e-01 0.0143 0.0714 0.56 CD4_TCM L2
ENSG00000164483 SAMD3 667693 sc-eQTL 3.97e-01 -0.0552 0.065 0.56 CD4_TCM L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 8.27e-01 -0.0186 0.0854 0.56 CD4_TEM L2
ENSG00000112282 MED23 -595124 sc-eQTL 6.51e-01 0.0356 0.0786 0.56 CD4_TEM L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 2.60e-01 -0.0973 0.0861 0.56 CD4_TEM L2
ENSG00000164483 SAMD3 667693 sc-eQTL 7.61e-01 -0.0168 0.055 0.56 CD4_TEM L2
ENSG00000112282 MED23 -595124 sc-eQTL 4.35e-01 -0.0581 0.0743 0.56 CD8_CTL L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 5.84e-01 -0.0456 0.0832 0.56 CD8_CTL L2
ENSG00000164483 SAMD3 667693 sc-eQTL 2.03e-01 -0.0672 0.0527 0.56 CD8_CTL L2
ENSG00000112282 MED23 -595124 sc-eQTL 8.76e-01 0.0107 0.0688 0.56 CD8_Naive L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 8.13e-01 -0.0184 0.0777 0.56 CD8_Naive L2
ENSG00000164483 SAMD3 667693 sc-eQTL 5.89e-01 -0.0372 0.0688 0.56 CD8_Naive L2
ENSG00000112282 MED23 -595124 sc-eQTL 5.05e-02 0.168 0.0852 0.556 CD8_TCM L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 5.67e-01 0.0529 0.0923 0.556 CD8_TCM L2
ENSG00000164483 SAMD3 667693 sc-eQTL 7.27e-01 -0.0276 0.0787 0.556 CD8_TCM L2
ENSG00000112282 MED23 -595124 sc-eQTL 3.42e-01 -0.0823 0.0865 0.566 CD8_TEM L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 8.46e-01 0.0171 0.0881 0.566 CD8_TEM L2
ENSG00000164483 SAMD3 667693 sc-eQTL 6.98e-01 -0.0244 0.0629 0.566 CD8_TEM L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 8.65e-01 -0.0134 0.0787 0.558 MAIT L2
ENSG00000112282 MED23 -595124 sc-eQTL 9.66e-01 0.00366 0.0857 0.558 MAIT L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 2.45e-01 -0.0985 0.0844 0.558 MAIT L2
ENSG00000164483 SAMD3 667693 sc-eQTL 8.49e-01 -0.0096 0.0505 0.558 MAIT L2
ENSG00000112282 MED23 -595124 sc-eQTL 5.45e-01 -0.0536 0.0884 0.556 NK_CD56bright L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 6.63e-01 0.0374 0.0858 0.556 NK_CD56bright L2
ENSG00000164483 SAMD3 667693 sc-eQTL 6.55e-01 0.0304 0.0679 0.556 NK_CD56bright L2
ENSG00000227678 AL355581.1 886939 sc-eQTL 9.95e-02 -0.129 0.0782 0.556 NK_CD56bright L2
ENSG00000112282 MED23 -595124 sc-eQTL 6.31e-01 -0.0337 0.0701 0.558 NK_CD56dim L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 5.55e-01 -0.044 0.0744 0.558 NK_CD56dim L2
ENSG00000164483 SAMD3 667693 sc-eQTL 3.02e-01 -0.0419 0.0405 0.558 NK_CD56dim L2
ENSG00000227678 AL355581.1 886939 sc-eQTL 6.65e-01 -0.0356 0.0821 0.558 NK_CD56dim L2
ENSG00000112282 MED23 -595124 sc-eQTL 3.89e-01 0.0731 0.0846 0.548 NK_HLA L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 8.22e-02 -0.152 0.0872 0.548 NK_HLA L2
ENSG00000164483 SAMD3 667693 sc-eQTL 3.77e-01 -0.0639 0.0722 0.548 NK_HLA L2
ENSG00000227678 AL355581.1 886939 sc-eQTL 1.30e-01 -0.121 0.0796 0.548 NK_HLA L2
ENSG00000112282 MED23 -595124 sc-eQTL 7.04e-01 -0.0292 0.0766 0.558 NK_cytokine L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 4.87e-01 0.0537 0.0772 0.558 NK_cytokine L2
ENSG00000164483 SAMD3 667693 sc-eQTL 1.57e-01 -0.0683 0.0481 0.558 NK_cytokine L2
ENSG00000227678 AL355581.1 886939 sc-eQTL 5.96e-01 -0.0443 0.0834 0.558 NK_cytokine L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 8.03e-01 -0.0267 0.107 0.574 PB L2
ENSG00000112282 MED23 -595124 sc-eQTL 9.48e-01 -0.00658 0.101 0.574 PB L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 6.99e-01 0.0381 0.0981 0.574 PB L2
ENSG00000164483 SAMD3 667693 sc-eQTL 8.12e-01 0.0222 0.093 0.574 PB L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 5.84e-01 -0.0408 0.0745 0.557 Pro_T L2
ENSG00000112282 MED23 -595124 sc-eQTL 4.37e-01 0.0674 0.0866 0.557 Pro_T L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 1.25e-01 -0.114 0.0739 0.557 Pro_T L2
ENSG00000164483 SAMD3 667693 sc-eQTL 5.69e-02 -0.0911 0.0476 0.557 Pro_T L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 9.93e-02 0.135 0.0817 0.56 Treg L2
ENSG00000112282 MED23 -595124 sc-eQTL 1.72e-01 0.115 0.0843 0.56 Treg L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 5.25e-01 0.0464 0.0729 0.56 Treg L2
ENSG00000164483 SAMD3 667693 sc-eQTL 7.45e-02 0.125 0.0697 0.56 Treg L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 3.93e-06 0.324 0.0681 0.551 cDC L2
ENSG00000112282 MED23 -595124 sc-eQTL 2.63e-01 -0.104 0.0925 0.551 cDC L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 5.80e-01 0.0499 0.09 0.551 cDC L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 1.36e-06 0.36 0.0723 0.56 cMono_IL1B L2
ENSG00000112282 MED23 -595124 sc-eQTL 1.83e-01 -0.1 0.0748 0.56 cMono_IL1B L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 8.88e-02 0.124 0.0726 0.56 cMono_IL1B L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 1.74e-04 0.294 0.0769 0.56 cMono_S100A L2
ENSG00000112282 MED23 -595124 sc-eQTL 1.79e-01 -0.106 0.0786 0.56 cMono_S100A L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 1.69e-01 0.106 0.0769 0.56 cMono_S100A L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 9.34e-01 0.00771 0.0931 0.545 gdT L2
ENSG00000112282 MED23 -595124 sc-eQTL 5.83e-01 0.0575 0.104 0.545 gdT L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 5.65e-01 -0.0628 0.109 0.545 gdT L2
ENSG00000164483 SAMD3 667693 sc-eQTL 5.11e-01 -0.0546 0.0829 0.545 gdT L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 1.42e-05 0.347 0.078 0.556 intMono L2
ENSG00000112282 MED23 -595124 sc-eQTL 2.67e-01 -0.0977 0.0878 0.556 intMono L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 5.72e-01 0.0486 0.0859 0.556 intMono L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 3.47e-03 0.222 0.075 0.561 ncMono L2
ENSG00000112282 MED23 -595124 sc-eQTL 3.92e-01 -0.0716 0.0834 0.561 ncMono L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 6.88e-01 -0.0326 0.081 0.561 ncMono L2
ENSG00000079819 EPB41L2 -30204 sc-eQTL 7.28e-01 -0.0326 0.0936 0.562 pDC L2
ENSG00000112282 MED23 -595124 sc-eQTL 8.70e-02 0.161 0.0938 0.562 pDC L2
ENSG00000118507 AKAP7 -102349 sc-eQTL 6.19e-01 -0.0385 0.0772 0.562 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 -30204 sc-eQTL 2.46e-02 0.162 0.0716 0.56 B_Memory LOneK1K
ENSG00000112282 MED23 -595124 sc-eQTL 4.04e-01 0.0595 0.0711 0.56 B_Memory LOneK1K
ENSG00000118507 AKAP7 -102349 sc-eQTL 8.20e-01 0.0165 0.0723 0.56 B_Memory LOneK1K
ENSG00000164483 SAMD3 667693 sc-eQTL 6.52e-01 0.0326 0.0722 0.56 B_Memory LOneK1K
ENSG00000079819 EPB41L2 -30204 sc-eQTL 4.51e-02 0.122 0.0608 0.56 B_Naive LOneK1K
ENSG00000112282 MED23 -595124 sc-eQTL 9.59e-01 -0.00353 0.0679 0.56 B_Naive LOneK1K
ENSG00000118507 AKAP7 -102349 sc-eQTL 1.84e-03 -0.264 0.0836 0.56 B_Naive LOneK1K
ENSG00000164483 SAMD3 667693 sc-eQTL 1.79e-01 0.0986 0.0731 0.56 B_Naive LOneK1K
ENSG00000079819 EPB41L2 -30204 sc-eQTL 2.58e-10 0.441 0.0664 0.56 CD14_Mono LOneK1K
ENSG00000112282 MED23 -595124 sc-eQTL 7.02e-02 -0.127 0.0698 0.56 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 -102349 sc-eQTL 5.01e-02 0.135 0.0685 0.56 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 -30204 sc-eQTL 9.92e-05 0.299 0.0753 0.562 CD16_Mono LOneK1K
ENSG00000112282 MED23 -595124 sc-eQTL 5.17e-01 -0.0515 0.0793 0.562 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 -102349 sc-eQTL 4.08e-01 0.0674 0.0814 0.562 CD16_Mono LOneK1K
ENSG00000112282 MED23 -595124 sc-eQTL 7.91e-01 -0.0165 0.0619 0.558 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 -102349 sc-eQTL 8.53e-01 0.0126 0.0683 0.558 NK_CD56dim LOneK1K
ENSG00000164483 SAMD3 667693 sc-eQTL 2.62e-01 -0.0417 0.0371 0.558 NK_CD56dim LOneK1K
ENSG00000227678 AL355581.1 886939 sc-eQTL 7.56e-01 -0.025 0.0802 0.558 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079819 EPB41L2 -30204 eQTL 1.11e-59 0.313 0.0179 0.00168 0.00262 0.438
ENSG00000118507 AKAP7 -102349 eQTL 0.352 0.0187 0.0201 0.00382 0.00155 0.438

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079819 EPB41L2 -30204 1.56e-05 2.41e-05 3.02e-06 1.17e-05 2.96e-06 7.78e-06 2.38e-05 3.51e-06 2e-05 7.9e-06 2.45e-05 1.16e-05 3.24e-05 9.68e-06 4.71e-06 9.76e-06 1.07e-05 1.59e-05 4.67e-06 4.62e-06 7.68e-06 1.73e-05 1.84e-05 4.9e-06 3.23e-05 5.26e-06 7.96e-06 7.58e-06 1.77e-05 1.57e-05 1.29e-05 1.19e-06 1.46e-06 3.93e-06 8.76e-06 3.03e-06 1.79e-06 2.39e-06 2.7e-06 1.74e-06 1.14e-06 2.6e-05 2.64e-06 3.55e-07 1.15e-06 2.35e-06 2.6e-06 8.29e-07 4.78e-07