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Genes within 1Mb (chr6:127010806:A:AAAGACATAGAGT):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000093144 ECHDC1 -332803 sc-eQTL 4.89e-02 0.0917 0.0463 0.654 B L1
ENSG00000118518 RNF146 -255804 sc-eQTL 4.70e-01 0.0537 0.0743 0.654 B L1
ENSG00000203760 CENPW 670632 sc-eQTL 7.83e-02 0.129 0.0729 0.654 B L1
ENSG00000093144 ECHDC1 -332803 sc-eQTL 3.35e-01 0.0548 0.0567 0.654 CD4T L1
ENSG00000118518 RNF146 -255804 sc-eQTL 9.13e-01 -0.00844 0.0775 0.654 CD4T L1
ENSG00000172673 THEMIS -907825 sc-eQTL 4.49e-01 -0.0449 0.0591 0.654 CD4T L1
ENSG00000214338 SOGA3 -508385 sc-eQTL 4.50e-01 0.038 0.0502 0.654 CD4T L1
ENSG00000093144 ECHDC1 -332803 sc-eQTL 1.81e-01 -0.0928 0.0691 0.654 CD8T L1
ENSG00000118518 RNF146 -255804 sc-eQTL 5.65e-01 0.0514 0.0892 0.654 CD8T L1
ENSG00000172673 THEMIS -907825 sc-eQTL 7.40e-01 -0.023 0.0693 0.654 CD8T L1
ENSG00000093144 ECHDC1 -332803 sc-eQTL 5.42e-01 0.0473 0.0774 0.644 DC L1
ENSG00000118518 RNF146 -255804 sc-eQTL 7.50e-01 -0.0302 0.0946 0.644 DC L1
ENSG00000203760 CENPW 670632 sc-eQTL 4.95e-01 -0.0606 0.0885 0.644 DC L1
ENSG00000093144 ECHDC1 -332803 sc-eQTL 2.33e-01 -0.0657 0.0549 0.654 Mono L1
ENSG00000118518 RNF146 -255804 sc-eQTL 1.19e-01 -0.0952 0.0609 0.654 Mono L1
ENSG00000203760 CENPW 670632 sc-eQTL 5.38e-02 -0.144 0.0741 0.654 Mono L1
ENSG00000093144 ECHDC1 -332803 sc-eQTL 1.36e-01 0.102 0.0682 0.652 NK L1
ENSG00000118518 RNF146 -255804 sc-eQTL 6.59e-01 -0.035 0.0792 0.652 NK L1
ENSG00000172673 THEMIS -907825 sc-eQTL 2.39e-01 0.106 0.0893 0.652 NK L1
ENSG00000093144 ECHDC1 -332803 sc-eQTL 2.82e-01 -0.0664 0.0615 0.654 Other_T L1
ENSG00000118518 RNF146 -255804 sc-eQTL 1.03e-01 0.144 0.0882 0.654 Other_T L1
ENSG00000172673 THEMIS -907825 sc-eQTL 3.42e-01 -0.0613 0.0643 0.654 Other_T L1
ENSG00000203760 CENPW 670632 sc-eQTL 4.21e-01 0.0419 0.0519 0.654 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000093144 ECHDC1 -332803 sc-eQTL 8.33e-01 -0.0226 0.107 0.661 B_Activated L2
ENSG00000118518 RNF146 -255804 sc-eQTL 2.29e-01 -0.131 0.108 0.661 B_Activated L2
ENSG00000203760 CENPW 670632 sc-eQTL 8.73e-01 0.0122 0.0757 0.661 B_Activated L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 5.88e-01 0.0403 0.0743 0.655 B_Intermediate L2
ENSG00000118518 RNF146 -255804 sc-eQTL 7.07e-01 -0.0359 0.0954 0.655 B_Intermediate L2
ENSG00000203760 CENPW 670632 sc-eQTL 9.09e-01 0.0109 0.0954 0.655 B_Intermediate L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 8.01e-02 0.143 0.0812 0.653 B_Memory L2
ENSG00000118518 RNF146 -255804 sc-eQTL 3.21e-01 -0.0944 0.0949 0.653 B_Memory L2
ENSG00000203760 CENPW 670632 sc-eQTL 4.65e-01 0.0653 0.0891 0.653 B_Memory L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 9.29e-02 0.0926 0.0549 0.654 B_Naive1 L2
ENSG00000118518 RNF146 -255804 sc-eQTL 7.18e-02 0.156 0.0862 0.654 B_Naive1 L2
ENSG00000203760 CENPW 670632 sc-eQTL 5.69e-02 0.177 0.0927 0.654 B_Naive1 L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 9.51e-01 0.00439 0.071 0.655 B_Naive2 L2
ENSG00000118518 RNF146 -255804 sc-eQTL 3.52e-01 -0.0917 0.0982 0.655 B_Naive2 L2
ENSG00000203760 CENPW 670632 sc-eQTL 3.82e-01 -0.0744 0.085 0.655 B_Naive2 L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 9.06e-02 0.168 0.0988 0.652 CD4_CTL L2
ENSG00000118518 RNF146 -255804 sc-eQTL 3.92e-01 -0.0835 0.0973 0.652 CD4_CTL L2
ENSG00000172673 THEMIS -907825 sc-eQTL 7.40e-02 -0.117 0.0652 0.652 CD4_CTL L2
ENSG00000214338 SOGA3 -508385 sc-eQTL 6.55e-01 0.0393 0.0878 0.652 CD4_CTL L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 8.20e-01 0.0156 0.0686 0.654 CD4_Naive L2
ENSG00000118518 RNF146 -255804 sc-eQTL 5.27e-01 0.0519 0.082 0.654 CD4_Naive L2
ENSG00000172673 THEMIS -907825 sc-eQTL 2.15e-01 -0.073 0.0587 0.654 CD4_Naive L2
ENSG00000214338 SOGA3 -508385 sc-eQTL 2.39e-01 0.066 0.0559 0.654 CD4_Naive L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 2.82e-01 0.0765 0.071 0.654 CD4_TCM L2
ENSG00000118518 RNF146 -255804 sc-eQTL 8.77e-01 0.0142 0.0922 0.654 CD4_TCM L2
ENSG00000172673 THEMIS -907825 sc-eQTL 9.04e-01 -0.00819 0.068 0.654 CD4_TCM L2
ENSG00000214338 SOGA3 -508385 sc-eQTL 8.63e-01 -0.0121 0.0699 0.654 CD4_TCM L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 3.80e-01 -0.0737 0.0838 0.654 CD4_TEM L2
ENSG00000118518 RNF146 -255804 sc-eQTL 2.01e-01 -0.122 0.0951 0.654 CD4_TEM L2
ENSG00000172673 THEMIS -907825 sc-eQTL 8.10e-01 -0.0184 0.0764 0.654 CD4_TEM L2
ENSG00000214338 SOGA3 -508385 sc-eQTL 3.39e-02 0.167 0.0782 0.654 CD4_TEM L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 6.49e-01 -0.0384 0.0843 0.654 CD8_CTL L2
ENSG00000118518 RNF146 -255804 sc-eQTL 1.46e-01 -0.145 0.0994 0.654 CD8_CTL L2
ENSG00000172673 THEMIS -907825 sc-eQTL 6.53e-01 0.0325 0.0721 0.654 CD8_CTL L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 7.15e-01 -0.0316 0.0862 0.654 CD8_Naive L2
ENSG00000118518 RNF146 -255804 sc-eQTL 3.89e-01 0.0796 0.0922 0.654 CD8_Naive L2
ENSG00000172673 THEMIS -907825 sc-eQTL 8.71e-01 -0.00936 0.0576 0.654 CD8_Naive L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 7.06e-01 -0.0345 0.0914 0.655 CD8_TCM L2
ENSG00000118518 RNF146 -255804 sc-eQTL 8.02e-01 -0.0266 0.106 0.655 CD8_TCM L2
ENSG00000172673 THEMIS -907825 sc-eQTL 7.72e-01 0.0269 0.0925 0.655 CD8_TCM L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 1.58e-01 0.136 0.0958 0.651 CD8_TEM L2
ENSG00000118518 RNF146 -255804 sc-eQTL 4.74e-01 0.0704 0.0982 0.651 CD8_TEM L2
ENSG00000172673 THEMIS -907825 sc-eQTL 7.58e-01 0.0269 0.0872 0.651 CD8_TEM L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 8.06e-01 -0.0218 0.0888 0.654 MAIT L2
ENSG00000118518 RNF146 -255804 sc-eQTL 7.00e-01 0.0363 0.0941 0.654 MAIT L2
ENSG00000172673 THEMIS -907825 sc-eQTL 9.60e-02 -0.125 0.0745 0.654 MAIT L2
ENSG00000203760 CENPW 670632 sc-eQTL 4.75e-01 -0.0542 0.0757 0.654 MAIT L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 9.41e-01 -0.0073 0.098 0.653 NK_CD56bright L2
ENSG00000118518 RNF146 -255804 sc-eQTL 4.50e-01 0.0775 0.102 0.653 NK_CD56bright L2
ENSG00000172673 THEMIS -907825 sc-eQTL 6.95e-02 0.135 0.074 0.653 NK_CD56bright L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 5.26e-01 0.0493 0.0777 0.653 NK_CD56dim L2
ENSG00000118518 RNF146 -255804 sc-eQTL 2.40e-01 -0.105 0.0889 0.653 NK_CD56dim L2
ENSG00000172673 THEMIS -907825 sc-eQTL 9.68e-01 0.00359 0.0883 0.653 NK_CD56dim L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 8.47e-01 0.0194 0.101 0.655 NK_HLA L2
ENSG00000118518 RNF146 -255804 sc-eQTL 2.60e-01 0.117 0.103 0.655 NK_HLA L2
ENSG00000172673 THEMIS -907825 sc-eQTL 7.32e-01 -0.0277 0.0808 0.655 NK_HLA L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 1.33e-01 0.127 0.0845 0.653 NK_cytokine L2
ENSG00000118518 RNF146 -255804 sc-eQTL 6.83e-01 -0.0358 0.0876 0.653 NK_cytokine L2
ENSG00000172673 THEMIS -907825 sc-eQTL 6.08e-01 0.0425 0.0829 0.653 NK_cytokine L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 3.80e-01 0.0931 0.106 0.667 PB L2
ENSG00000118518 RNF146 -255804 sc-eQTL 2.59e-01 0.16 0.141 0.667 PB L2
ENSG00000203760 CENPW 670632 sc-eQTL 4.26e-01 -0.0758 0.0949 0.667 PB L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 6.19e-01 0.0378 0.0758 0.654 Pro_T L2
ENSG00000118518 RNF146 -255804 sc-eQTL 4.02e-01 0.0778 0.0926 0.654 Pro_T L2
ENSG00000172673 THEMIS -907825 sc-eQTL 6.54e-01 0.0289 0.0644 0.654 Pro_T L2
ENSG00000203760 CENPW 670632 sc-eQTL 3.43e-01 -0.0475 0.05 0.654 Pro_T L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 4.19e-01 0.0728 0.09 0.654 Treg L2
ENSG00000118518 RNF146 -255804 sc-eQTL 5.01e-01 -0.0659 0.0977 0.654 Treg L2
ENSG00000172673 THEMIS -907825 sc-eQTL 9.29e-02 0.161 0.0954 0.654 Treg L2
ENSG00000214338 SOGA3 -508385 sc-eQTL 3.74e-01 -0.0725 0.0813 0.654 Treg L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 4.50e-01 0.0688 0.0908 0.641 cDC L2
ENSG00000118518 RNF146 -255804 sc-eQTL 7.58e-01 0.031 0.1 0.641 cDC L2
ENSG00000203760 CENPW 670632 sc-eQTL 6.93e-01 -0.0375 0.0949 0.641 cDC L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 8.36e-01 -0.0128 0.062 0.654 cMono_IL1B L2
ENSG00000118518 RNF146 -255804 sc-eQTL 7.30e-02 -0.131 0.0727 0.654 cMono_IL1B L2
ENSG00000203760 CENPW 670632 sc-eQTL 3.10e-01 -0.0819 0.0805 0.654 cMono_IL1B L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 5.57e-01 -0.0433 0.0737 0.654 cMono_S100A L2
ENSG00000118518 RNF146 -255804 sc-eQTL 2.54e-01 -0.0912 0.0798 0.654 cMono_S100A L2
ENSG00000203760 CENPW 670632 sc-eQTL 4.59e-01 -0.0663 0.0893 0.654 cMono_S100A L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 5.44e-02 -0.207 0.107 0.655 gdT L2
ENSG00000118518 RNF146 -255804 sc-eQTL 7.22e-01 -0.039 0.11 0.655 gdT L2
ENSG00000172673 THEMIS -907825 sc-eQTL 7.26e-01 -0.0363 0.103 0.655 gdT L2
ENSG00000203760 CENPW 670632 sc-eQTL 8.63e-01 -0.0178 0.103 0.655 gdT L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 2.61e-01 -0.0944 0.0837 0.651 intMono L2
ENSG00000118518 RNF146 -255804 sc-eQTL 8.63e-01 -0.0153 0.0886 0.651 intMono L2
ENSG00000203760 CENPW 670632 sc-eQTL 4.85e-02 -0.185 0.0933 0.651 intMono L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 4.89e-01 -0.0601 0.0867 0.649 ncMono L2
ENSG00000118518 RNF146 -255804 sc-eQTL 5.13e-01 0.0549 0.0836 0.649 ncMono L2
ENSG00000203760 CENPW 670632 sc-eQTL 1.00e+00 4.94e-05 0.0908 0.649 ncMono L2
ENSG00000093144 ECHDC1 -332803 sc-eQTL 4.81e-01 0.0597 0.0846 0.647 pDC L2
ENSG00000118518 RNF146 -255804 sc-eQTL 6.68e-01 -0.0462 0.107 0.647 pDC L2
ENSG00000203760 CENPW 670632 sc-eQTL 7.05e-01 0.0398 0.105 0.647 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000093144 ECHDC1 -332803 sc-eQTL 3.16e-01 0.0643 0.064 0.654 B_Memory LOneK1K
ENSG00000118518 RNF146 -255804 sc-eQTL 3.72e-01 -0.0821 0.0919 0.654 B_Memory LOneK1K
ENSG00000203760 CENPW 670632 sc-eQTL 5.91e-01 0.0523 0.0972 0.654 B_Memory LOneK1K
ENSG00000093144 ECHDC1 -332803 sc-eQTL 8.38e-02 0.0868 0.0499 0.654 B_Naive LOneK1K
ENSG00000118518 RNF146 -255804 sc-eQTL 3.64e-01 0.0783 0.0861 0.654 B_Naive LOneK1K
ENSG00000203760 CENPW 670632 sc-eQTL 3.14e-01 0.0924 0.0916 0.654 B_Naive LOneK1K
ENSG00000093144 ECHDC1 -332803 sc-eQTL 3.77e-01 -0.0503 0.0568 0.654 CD14_Mono LOneK1K
ENSG00000118518 RNF146 -255804 sc-eQTL 4.16e-02 -0.138 0.0672 0.654 CD14_Mono LOneK1K
ENSG00000203760 CENPW 670632 sc-eQTL 1.54e-01 -0.118 0.0823 0.654 CD14_Mono LOneK1K
ENSG00000093144 ECHDC1 -332803 sc-eQTL 5.39e-02 -0.15 0.0776 0.651 CD16_Mono LOneK1K
ENSG00000118518 RNF146 -255804 sc-eQTL 7.49e-01 0.0234 0.0731 0.651 CD16_Mono LOneK1K
ENSG00000203760 CENPW 670632 sc-eQTL 1.96e-01 -0.108 0.0832 0.651 CD16_Mono LOneK1K
ENSG00000093144 ECHDC1 -332803 sc-eQTL 2.40e-01 0.0852 0.0722 0.653 NK_CD56dim LOneK1K
ENSG00000118518 RNF146 -255804 sc-eQTL 4.50e-01 -0.0623 0.0823 0.653 NK_CD56dim LOneK1K
ENSG00000172673 THEMIS -907825 sc-eQTL 6.36e-01 0.042 0.0886 0.653 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000172673 THEMIS -907825 eQTL 0.0463 -0.0305 0.0153 0.00127 0.0 0.382

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000189367 \N -448583 3.07e-07 1.34e-07 3.54e-08 2.25e-07 8.92e-08 8.21e-08 2.86e-07 5.33e-08 1.5e-07 6.08e-08 1.61e-07 8.55e-08 3.6e-07 7.64e-08 5.55e-08 9.11e-08 3.98e-08 1.18e-07 6.75e-08 4.03e-08 1.25e-07 1.39e-07 1.64e-07 3.49e-08 3.27e-07 1.16e-07 1.17e-07 9.74e-08 1.2e-07 2.02e-07 1.09e-07 3.89e-08 2.91e-08 8.72e-08 5.65e-08 3.97e-08 5.64e-08 9.6e-08 8.3e-08 4.55e-08 4.02e-08 1.59e-07 4.1e-08 1.29e-08 9.88e-08 6.53e-09 1.34e-07 4.41e-09 4.61e-08