JOB

Genes within 1Mb (chr6:126234709:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS

Gene ID	Gene Symbol	TSS Distance	Category	P-value	Effect Size	Effect Size (se)	MAF	Cell type	Cluster resolution

Gene ID	Gene Symbol	TSS Distance	Category	P-value	Effect Size	Effect Size (se)	MAF	Cell type	Cluster resolution
ENSG00000066651	TRMT11	248230	sc-eQTL	3.81e-01	-0.171	0.195	0.05	CD4_CTL	L2
ENSG00000111906	HDDC2	932631	sc-eQTL	8.05e-01	-0.0475	0.192	0.05	CD4_CTL	L2
ENSG00000111911	HINT3	277939	sc-eQTL	3.06e-01	0.194	0.189	0.05	CD4_CTL	L2
ENSG00000111912	NCOA7	453548	sc-eQTL	4.16e-01	0.162	0.198	0.05	CD4_CTL	L2
ENSG00000066651	TRMT11	248230	sc-eQTL	7.01e-01	0.0732	0.19	0.05	NK_HLA	L2
ENSG00000111906	HDDC2	932631	sc-eQTL	7.55e-01	0.0604	0.193	0.05	NK_HLA	L2
ENSG00000111911	HINT3	277939	sc-eQTL	9.47e-01	0.0133	0.2	0.05	NK_HLA	L2
ENSG00000111912	NCOA7	453548	sc-eQTL	2.00e-01	-0.258	0.2	0.05	NK_HLA	L2
ENSG00000066651	TRMT11	248230	sc-eQTL	7.92e-02	0.342	0.194	0.05	Pro_T	L2
ENSG00000111906	HDDC2	932631	sc-eQTL	7.62e-01	-0.0557	0.184	0.05	Pro_T	L2
ENSG00000111911	HINT3	277939	sc-eQTL	4.70e-01	0.147	0.203	0.05	Pro_T	L2
ENSG00000111912	NCOA7	453548	sc-eQTL	6.57e-01	-0.0792	0.178	0.05	Pro_T	L2
ENSG00000203760	CENPW	-105465	sc-eQTL	2.50e-01	-0.115	0.0996	0.05	Pro_T	L2
ENSG00000066651	TRMT11	248230	sc-eQTL	5.79e-01	-0.109	0.197	0.054	pDC	L2
ENSG00000111906	HDDC2	932631	sc-eQTL	7.51e-01	-0.0684	0.215	0.054	pDC	L2
ENSG00000111911	HINT3	277939	sc-eQTL	6.56e-01	-0.0916	0.205	0.054	pDC	L2
ENSG00000111912	NCOA7	453548	sc-eQTL	2.28e-01	0.235	0.194	0.054	pDC	L2
ENSG00000203760	CENPW	-105465	sc-eQTL	5.56e-01	-0.123	0.209	0.054	pDC	L2

Gene ID	Gene Symbol	TSS Distance	Category	P-value	Effect Size	Effect Size (se)	MAF	Cell type	Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force

(Shown only for PIP>0.001)

Gene ID	Gene Symbol	TSS Distance	Category	P-value	Effect Size	Effect Size (se)	PIP (SuSiE)	PIP (FINEMAP)	MAF
ENSG00000066651	TRMT11	248230	eQTL	0.0375	0.0708	0.034	0.0	0.0	0.0574
ENSG00000203760	CENPW	-105465	eQTL	0.0181	-0.102	0.043	0.0025	0.0	0.0574

Expression Modifier Score(EMS) for GTEx 49tissues

Gene ID	Gene Symbol	TSS Distance	Whole Blood	Muscle Skeletal	Liver	Brain Cerebellum	Prostate	Spleen	Skin Sun Exposed Lower leg	Artery Coronary	Esophagus Muscularis	Esophagus Gastroesophageal Junction	Artery Tibial	Heart Atrial Appendage	Nerve Tibial	Heart Left Ventricle	Adrenal Gland	Adipose Visceral Omentum	Pancreas	Lung	Pituitary	Brain Nucleus accumbens basal ganglia	Colon Transverse	Adipose Subcutaneous	Esophagus Mucosa	Brain Cortex	Thyroid	Stomach	Breast Mammary Tissue	Colon Sigmoid	Skin Not Sun Exposed Suprapubic	Testis	Artery Aorta	Brain Amygdala	Brain Anterior cingulate cortex BA24	Brain Caudate basal ganglia	Brain Cerebellar Hemisphere	Brain Frontal Cortex BA9	Brain Hippocampus	Brain Hypothalamus	Brain Putamen basal ganglia	Brain Spinal cord cervical c-1	Brain Substantia nigra	Cells Cultured fibroblasts	Cells EBV-transformed lymphocytes	Kidney Cortex	Minor Salivary Gland	Ovary	Small Intestine Terminal Ileum	Uterus	Vagina