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Genes within 1Mb (chr6:125300472:A:G):

View on , UCSC , GTEx , gnomAD

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111906 HDDC2 -1606 pQTL 3.35e-115 -0.545 0.0216 0.0 0.0117 0.178
ENSG00000111906 HDDC2 -1606 eQTL 2.02e-82 -0.459 0.0216 0.0 0.00159 0.178
ENSG00000135547 HEY2 -447192 eQTL 5.35e-04 -0.161 0.0463 0.00726 0.0073 0.178

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111906 HDDC2 -1606 0.000393 0.000554 0.000341 0.000692 0.000442 0.000403 0.0007 0.000309 0.00142 0.000654 0.00146 0.000781 0.00166 0.000531 0.000289 0.000635 0.000502 0.00106 0.000608 0.000283 0.00101 0.00105 0.000496 0.00039 0.00152 0.000483 0.000607 0.00095 0.00111 0.000231 0.00096 0.000151 0.000176 0.000357 0.000481 0.000296 0.000211 0.000252 0.000236 0.000272 0.000223 0.000554 0.000115 3.88e-05 0.000108 0.000369 0.000235 0.000173 0.000133