Genes within 1Mb (chr17:46279994:G:A):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000073969 NSF -310675 eQTL 0.00112 0.248 0.076 0.0 0.0 0.0142
ENSG00000108379 WNT3 -553064 eQTL 0.507 -0.0856 0.129 0.00136 0.0 0.0142
ENSG00000108433 GOSR2 -643081 eQTL 0.00701 -0.17 0.0629 0.006 0.00123 0.0142
ENSG00000176681 LRRC37A -12739 eQTL 0.000349 -0.676 0.188 0.0 0.0 0.0142
ENSG00000214401 KANSL1-AS1 86418 eQTL 0.498 0.0866 0.128 0.00106 0.0 0.0142
ENSG00000228696 ARL17B -81803 eQTL 0.0118 0.402 0.159 0.0 0.0 0.0142
ENSG00000232300 FAM215B -282801 eQTL 0.00957 0.401 0.154 0.0 0.0 0.0142
ENSG00000238083 LRRC37A2 -231517 pQTL 0.0475 -0.251 0.127 0.0 0.0 0.0134
ENSG00000260075 NSFP1 -92861 eQTL 0.00429 0.521 0.182 0.0 0.0 0.0142
ENSG00000261872 AC002558.2 -889832 eQTL 0.0411 -0.288 0.141 0.0 0.0 0.0142
ENSG00000262879 AC068152.1 -820329 eQTL 0.108 0.18 0.112 0.00192 0.0 0.0142
ENSG00000267198 AC091132.4 734190 eQTL 0.00421 0.446 0.155 0.00168 0.0 0.0142


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000120071 \N 54605 2.84e-05 2.04e-05 3.01e-06 6.16e-06 2.31e-06 5.83e-06 1.73e-05 1.79e-06 1.07e-05 4.89e-06 1.74e-05 7.63e-06 3.35e-05 9.05e-06 6.25e-06 8.83e-06 8.79e-06 1.41e-05 2.66e-06 2.01e-06 6.47e-06 1.66e-05 1.57e-05 3.25e-06 2.42e-05 4.6e-06 4.86e-06 3.27e-06 1.38e-05 1.14e-05 1.03e-05 4.61e-07 8.21e-07 2.79e-06 5.46e-06 2.77e-06 1.64e-06 1.46e-06 1.39e-06 6.1e-07 4.63e-07 9.44e-05 1.79e-06 1.67e-07 8.01e-07 9.76e-07 9.16e-07 6.9e-07 4.23e-07
ENSG00000185829 \N -299688 1.58e-06 1.39e-06 2.05e-07 3.77e-07 9.93e-08 6.02e-07 1.55e-06 7.65e-08 1.11e-06 2.34e-07 1.85e-06 6.02e-07 2.63e-06 1.02e-06 4.4e-07 9.13e-07 8.26e-07 1.3e-06 4.95e-07 6.03e-08 6.36e-07 1.6e-06 1.4e-06 2.27e-07 1.97e-06 2.34e-07 4.16e-07 1.67e-07 9.15e-07 1.31e-06 8.17e-07 3.89e-08 3.74e-08 1.24e-07 3.66e-07 2.42e-07 6.48e-08 7.49e-08 4e-08 7.04e-08 4.57e-08 1.93e-05 1.65e-08 1.29e-08 8.45e-08 1.37e-08 9.84e-08 3.92e-09 4.9e-08
ENSG00000228696 ARL17B -81803 1.55e-05 1.3e-05 1.58e-06 3.5e-06 1.62e-06 3.9e-06 9.65e-06 1.07e-06 4.88e-06 2.33e-06 1.23e-05 5.59e-06 2.39e-05 6.35e-06 5.45e-06 6.06e-06 4.52e-06 9.77e-06 1.57e-06 1.2e-06 3.56e-06 1.1e-05 1.01e-05 1.99e-06 1.29e-05 2.58e-06 2.27e-06 1.44e-06 7.44e-06 7.71e-06 5.88e-06 2.49e-07 7.09e-07 1.75e-06 2.88e-06 1.38e-06 9.59e-07 4.37e-07 1.05e-06 3.97e-07 3.53e-07 0.000185 6.62e-07 3.39e-08 4.7e-07 3.21e-07 6.93e-07 9.26e-08 2.76e-07
ENSG00000232300 FAM215B -282801 1.93e-06 1.58e-06 3e-07 4.72e-07 1.19e-07 6.09e-07 1.48e-06 8.37e-08 1.27e-06 2.72e-07 2.1e-06 6.61e-07 2.89e-06 1.43e-06 6.59e-07 9.37e-07 8.37e-07 1.55e-06 5.88e-07 6.58e-08 7.49e-07 1.69e-06 1.56e-06 3.06e-07 2.3e-06 2.54e-07 4.7e-07 1.95e-07 1.11e-06 1.47e-06 8.3e-07 3.87e-08 4.27e-08 1.19e-07 3.41e-07 3.02e-07 7.74e-08 6.98e-08 6.81e-08 8.34e-08 3.98e-08 2.39e-05 2.8e-08 1.52e-08 9.64e-08 1.95e-08 9.46e-08 3.86e-09 5.04e-08
ENSG00000260075 NSFP1 -92861 1.41e-05 1.25e-05 1.28e-06 3.45e-06 1.33e-06 3.19e-06 9.55e-06 9.93e-07 4.71e-06 1.94e-06 1.13e-05 5.23e-06 2.09e-05 5.5e-06 5.24e-06 5.39e-06 3.83e-06 9.07e-06 1.36e-06 1.29e-06 3.02e-06 1.01e-05 8.9e-06 1.68e-06 1.14e-05 2.32e-06 2.59e-06 1.69e-06 6.77e-06 7.66e-06 5.42e-06 3.01e-07 5.76e-07 1.34e-06 2.16e-06 1.17e-06 9.08e-07 4.2e-07 1.31e-06 2.76e-07 3.04e-07 0.000195 3.65e-07 1.29e-08 4.14e-07 3.42e-07 4.17e-07 5.35e-08 1.93e-07
ENSG00000261872 AC002558.2 -889832 3.27e-07 1.35e-07 3.71e-08 1.8e-07 9.02e-08 8.21e-08 2.16e-07 5.21e-08 1.45e-07 4.38e-08 1.59e-07 8.14e-08 2.38e-07 8.54e-08 6.25e-08 7.98e-08 3.9e-08 1.91e-07 5.82e-08 2.85e-08 1.26e-07 1.31e-07 1.58e-07 4.54e-08 1.55e-07 1.14e-07 1.06e-07 8.71e-08 1.09e-07 2.19e-07 1.07e-07 3.19e-08 2.74e-08 8.02e-08 8.87e-08 3.99e-08 5.1e-08 8.75e-08 8.55e-08 3.74e-08 3.18e-08 1.59e-06 4.01e-08 0.0 9.88e-08 1.74e-08 1.44e-07 4.96e-09 4.72e-08