logo

Genes within 1Mb (chr12:99938278:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 -260844 sc-eQTL 3.01e-01 -0.0793 0.0764 0.44 B L1
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 5.37e-01 0.0401 0.0649 0.44 B L1
ENSG00000136021 SCYL2 -328862 sc-eQTL 5.00e-01 -0.0437 0.0647 0.44 B L1
ENSG00000075089 ACTR6 -260844 sc-eQTL 4.07e-01 0.0478 0.0574 0.44 CD4T L1
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 9.78e-01 0.00145 0.0536 0.44 CD4T L1
ENSG00000136021 SCYL2 -328862 sc-eQTL 9.65e-01 -0.00204 0.0458 0.44 CD4T L1
ENSG00000075089 ACTR6 -260844 sc-eQTL 4.50e-01 0.0486 0.0641 0.44 CD8T L1
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 8.59e-01 0.0113 0.0635 0.44 CD8T L1
ENSG00000136021 SCYL2 -328862 sc-eQTL 3.50e-01 0.0556 0.0594 0.44 CD8T L1
ENSG00000075089 ACTR6 -260844 sc-eQTL 4.68e-01 0.0616 0.0846 0.444 DC L1
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 2.89e-01 0.0867 0.0815 0.444 DC L1
ENSG00000136021 SCYL2 -328862 sc-eQTL 8.36e-01 -0.0188 0.0906 0.444 DC L1
ENSG00000139354 GAS2L3 -635405 sc-eQTL 7.82e-01 -0.0233 0.0842 0.444 DC L1
ENSG00000075089 ACTR6 -260844 sc-eQTL 6.75e-01 0.032 0.0763 0.44 Mono L1
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 5.94e-01 -0.0335 0.0627 0.44 Mono L1
ENSG00000136021 SCYL2 -328862 sc-eQTL 5.66e-01 0.0376 0.0654 0.44 Mono L1
ENSG00000139354 GAS2L3 -635405 sc-eQTL 5.12e-01 0.0402 0.0612 0.44 Mono L1
ENSG00000075089 ACTR6 -260844 sc-eQTL 5.31e-01 -0.0431 0.0687 0.438 NK L1
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 6.28e-01 0.0275 0.0567 0.438 NK L1
ENSG00000136021 SCYL2 -328862 sc-eQTL 1.66e-02 0.139 0.0576 0.438 NK L1
ENSG00000075089 ACTR6 -260844 sc-eQTL 6.62e-01 -0.0361 0.0826 0.44 Other_T L1
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 9.62e-01 0.00369 0.0784 0.44 Other_T L1
ENSG00000136021 SCYL2 -328862 sc-eQTL 5.88e-02 0.136 0.0716 0.44 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 -260844 sc-eQTL 5.94e-01 0.0522 0.0978 0.446 B_Activated L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 4.30e-01 0.0827 0.104 0.446 B_Activated L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 9.18e-01 -0.0102 0.0983 0.446 B_Activated L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 2.32e-01 -0.103 0.086 0.44 B_Intermediate L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 3.97e-01 -0.0779 0.0919 0.44 B_Intermediate L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 3.64e-01 0.0685 0.0753 0.44 B_Intermediate L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 4.55e-01 -0.0685 0.0916 0.442 B_Memory L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 7.54e-02 0.157 0.0877 0.442 B_Memory L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 3.54e-02 -0.168 0.0793 0.442 B_Memory L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 8.81e-01 0.0123 0.0821 0.44 B_Naive1 L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 9.52e-01 -0.0047 0.0787 0.44 B_Naive1 L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 1.42e-01 0.109 0.074 0.44 B_Naive1 L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 5.12e-01 -0.0603 0.0918 0.44 B_Naive2 L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 1.34e-01 0.132 0.0876 0.44 B_Naive2 L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 3.78e-01 -0.0758 0.0859 0.44 B_Naive2 L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 6.64e-01 -0.0407 0.0936 0.427 CD4_CTL L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 9.86e-01 -0.00164 0.0928 0.427 CD4_CTL L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 8.83e-01 -0.0134 0.0916 0.427 CD4_CTL L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 4.55e-01 0.0493 0.0658 0.44 CD4_Naive L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 8.52e-01 -0.0116 0.0622 0.44 CD4_Naive L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 9.84e-01 0.0011 0.0551 0.44 CD4_Naive L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 1.97e-01 0.0911 0.0704 0.44 CD4_TCM L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 4.20e-01 0.0599 0.0742 0.44 CD4_TCM L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 3.76e-01 -0.0559 0.0629 0.44 CD4_TCM L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 1.61e-01 -0.115 0.0818 0.44 CD4_TEM L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 4.85e-01 0.0568 0.0813 0.44 CD4_TEM L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 8.66e-01 -0.0139 0.0827 0.44 CD4_TEM L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 8.41e-01 0.0148 0.0739 0.44 CD8_CTL L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 6.41e-01 0.0353 0.0756 0.44 CD8_CTL L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 3.56e-01 0.0689 0.0744 0.44 CD8_CTL L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 2.12e-01 0.0924 0.0737 0.44 CD8_Naive L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 4.25e-01 0.0633 0.0793 0.44 CD8_Naive L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 9.38e-01 -0.00547 0.0706 0.44 CD8_Naive L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 2.52e-01 -0.0972 0.0846 0.431 CD8_TCM L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 7.10e-01 -0.0337 0.0906 0.431 CD8_TCM L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 4.45e-01 0.0687 0.0898 0.431 CD8_TCM L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 4.63e-02 -0.175 0.087 0.434 CD8_TEM L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 7.63e-01 0.0285 0.0943 0.434 CD8_TEM L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 7.58e-01 -0.0297 0.0962 0.434 CD8_TEM L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 9.85e-01 -0.00172 0.0901 0.439 MAIT L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 9.06e-01 -0.00984 0.0835 0.439 MAIT L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 2.15e-01 0.097 0.0781 0.439 MAIT L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 1.23e-01 -0.136 0.088 0.433 NK_CD56bright L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 3.49e-01 0.0794 0.0846 0.433 NK_CD56bright L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 5.96e-01 0.0453 0.0852 0.433 NK_CD56bright L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 3.30e-01 -0.0785 0.0803 0.435 NK_CD56dim L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 4.26e-01 -0.0547 0.0686 0.435 NK_CD56dim L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 1.45e-03 0.229 0.0709 0.435 NK_CD56dim L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 2.31e-01 0.111 0.092 0.447 NK_HLA L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 3.28e-01 0.091 0.0928 0.447 NK_HLA L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 3.60e-01 -0.0871 0.095 0.447 NK_HLA L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 1.36e-01 -0.122 0.0813 0.435 NK_cytokine L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 4.12e-01 0.0624 0.0759 0.435 NK_cytokine L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 7.19e-01 0.0257 0.0716 0.435 NK_cytokine L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 7.21e-01 -0.0463 0.129 0.459 PB L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 1.61e-02 -0.297 0.121 0.459 PB L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 5.79e-02 0.25 0.13 0.459 PB L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 2.15e-01 -0.114 0.0917 0.435 Pro_T L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 9.79e-01 0.00243 0.0917 0.435 Pro_T L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 6.17e-01 0.0448 0.0895 0.435 Pro_T L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 2.90e-01 -0.0917 0.0865 0.44 Treg L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 2.88e-01 0.0943 0.0886 0.44 Treg L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 4.75e-01 0.0601 0.0839 0.44 Treg L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 2.65e-01 0.1 0.0894 0.444 cDC L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 7.65e-01 0.0282 0.0943 0.444 cDC L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 4.38e-01 -0.0698 0.0898 0.444 cDC L2
ENSG00000139354 GAS2L3 -635405 sc-eQTL 9.54e-01 0.00514 0.0888 0.444 cDC L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 5.10e-01 0.0509 0.0771 0.44 cMono_IL1B L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 8.96e-01 0.00815 0.062 0.44 cMono_IL1B L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 1.88e-01 0.0989 0.0749 0.44 cMono_IL1B L2
ENSG00000139354 GAS2L3 -635405 sc-eQTL 4.09e-01 0.0541 0.0654 0.44 cMono_IL1B L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 3.10e-01 0.0883 0.0867 0.44 cMono_S100A L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 9.72e-01 0.00291 0.0817 0.44 cMono_S100A L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 3.11e-01 -0.0837 0.0824 0.44 cMono_S100A L2
ENSG00000139354 GAS2L3 -635405 sc-eQTL 6.31e-01 -0.0393 0.0818 0.44 cMono_S100A L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 3.96e-01 0.0911 0.107 0.442 gdT L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 4.94e-01 -0.0739 0.108 0.442 gdT L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 1.06e-01 0.176 0.108 0.442 gdT L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 9.80e-01 -0.00235 0.0919 0.44 intMono L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 7.86e-03 -0.247 0.0919 0.44 intMono L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 5.57e-01 0.0548 0.0932 0.44 intMono L2
ENSG00000139354 GAS2L3 -635405 sc-eQTL 2.24e-01 0.105 0.0858 0.44 intMono L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 6.63e-02 -0.157 0.0848 0.437 ncMono L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 1.83e-01 -0.113 0.0845 0.437 ncMono L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 8.27e-01 -0.0193 0.0878 0.437 ncMono L2
ENSG00000139354 GAS2L3 -635405 sc-eQTL 6.49e-01 0.0341 0.0748 0.437 ncMono L2
ENSG00000075089 ACTR6 -260844 sc-eQTL 8.85e-01 -0.0139 0.0955 0.452 pDC L2
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 1.26e-01 0.141 0.0915 0.452 pDC L2
ENSG00000136021 SCYL2 -328862 sc-eQTL 6.76e-01 0.042 0.1 0.452 pDC L2
ENSG00000139354 GAS2L3 -635405 sc-eQTL 6.40e-01 0.038 0.0812 0.452 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 -260844 sc-eQTL 3.78e-01 -0.0759 0.0858 0.44 B_Memory LOneK1K
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 5.73e-01 0.0484 0.0857 0.44 B_Memory LOneK1K
ENSG00000136021 SCYL2 -328862 sc-eQTL 5.02e-01 -0.0451 0.0671 0.44 B_Memory LOneK1K
ENSG00000075089 ACTR6 -260844 sc-eQTL 6.36e-01 -0.0386 0.0813 0.44 B_Naive LOneK1K
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 5.96e-01 0.0391 0.0738 0.44 B_Naive LOneK1K
ENSG00000136021 SCYL2 -328862 sc-eQTL 9.50e-01 0.00457 0.0728 0.44 B_Naive LOneK1K
ENSG00000075089 ACTR6 -260844 sc-eQTL 2.72e-01 0.0835 0.0759 0.44 CD14_Mono LOneK1K
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 9.02e-01 0.00747 0.0603 0.44 CD14_Mono LOneK1K
ENSG00000136021 SCYL2 -328862 sc-eQTL 6.03e-01 0.0353 0.0677 0.44 CD14_Mono LOneK1K
ENSG00000139354 GAS2L3 -635405 sc-eQTL 7.64e-01 0.0195 0.0651 0.44 CD14_Mono LOneK1K
ENSG00000075089 ACTR6 -260844 sc-eQTL 3.23e-02 -0.187 0.0867 0.438 CD16_Mono LOneK1K
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 1.15e-02 -0.206 0.0809 0.438 CD16_Mono LOneK1K
ENSG00000136021 SCYL2 -328862 sc-eQTL 8.15e-01 0.019 0.0812 0.438 CD16_Mono LOneK1K
ENSG00000139354 GAS2L3 -635405 sc-eQTL 3.62e-01 0.0714 0.0782 0.438 CD16_Mono LOneK1K
ENSG00000075089 ACTR6 -260844 sc-eQTL 8.31e-01 -0.0152 0.0711 0.435 NK_CD56dim LOneK1K
ENSG00000111647 UHRF1BP1L -204596 sc-eQTL 8.99e-01 -0.00757 0.0597 0.435 NK_CD56dim LOneK1K
ENSG00000136021 SCYL2 -328862 sc-eQTL 2.03e-02 0.14 0.0596 0.435 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000280088 AC126474.2 -95796 eQTL 0.00335 -0.0407 0.0138 0.00447 0.00199 0.429

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000280088 AC126474.2 -95796 7.55e-06 9.95e-06 1.04e-06 4.4e-06 1.87e-06 3.5e-06 9.59e-06 1.93e-06 8.81e-06 4.38e-06 1.05e-05 4.97e-06 1.3e-05 4.05e-06 1.76e-06 5.7e-06 3.85e-06 5.78e-06 2.64e-06 2.44e-06 3.51e-06 7.94e-06 6.57e-06 2.18e-06 1.31e-05 2.42e-06 3.64e-06 3.3e-06 7.34e-06 7.86e-06 5.07e-06 5.64e-07 7.42e-07 2.33e-06 3.01e-06 2.11e-06 1.12e-06 8.97e-07 1.36e-06 8.46e-07 3.61e-07 1.21e-05 9.75e-07 1.61e-07 6.07e-07 9.57e-07 1.03e-06 6.85e-07 6e-07